Emanuel Barth


M.Sc. Bioinformatik

RNA Bioinformatics and High Throughput Analysis Jena
Friedrich Schiller University Jena
Faculty of Mathematics and Computer Science
Leutragraben 1
07743 Jena
Germany

associated with Leibniz Institute on Aging –
Fritz Lipmann Institute e.V. (FLI)
Beutenbergstr. 11
07745 Jena
Germany

E-Mail: emanuel.barth*
Room: S0801
Phone: +49-3641-9-46481

*@uni-jena.de

Publications

2017

Baumgart, Mario; Barth, Emanuel; Savino, Aurora; Groth, Marco; Koch, Philipp; Petzold, Andreas; Arisi, Ivan; Platzer, Matthias; Marz, Manja; Cellerino, Alessandro

A miRNA catalogue and ncRNA annotation of the short-living fish Nothobranchius furzeri (Journal Article)

BMC Genomics, 18 (693), 2017.

(Abstract | Links | BibTeX)

K, Riege; M, Hölzer; E., Klassert; E, Barth; J, Bräuer; M, Collatz; F, Hufsky; N, Mostajo; M, Stock; B, Vogel; H, Slevogt; M, Marz

Massive Effect on LncRNAs in Human Monocytes During Fungal and Bacterial Infections and in Response to Vitamins A and D (Journal Article)

Scientific Reports (Nature PG), 7 (40598 ), 2017.

(Abstract | Links | BibTeX)

2016

M, Hölzer; V, Krähling; F, Amman; E, Barth; H, Bernhart; O, Carmelo; M, Collatz; G, Doose; F, Eggenhofer; J, Ewald; J, Fallmann; M, Feldhahn; M, Fricke; J, Gebauer; J, Gruber; F, Hufsky; H, Indrischek; S, Kanton; J, Linde; N, Mostajo; R, Ochsenreiter; K, Riege; L, Rivarola-Duarte; H, Sahyoun; J, Saunders; E, Seemann; A, Tanzer; B, Vogel; S, Wehner; T, Wolfinger; R, Backofen; J, Gorodkin; I, Grosse; I, Hofacker; S, Hoffmann; C, Kaleta; F, Stadler; S, Becker; M, Marz

Differential transcriptional responses to Ebola and Marburg virus infection in bat and human cells (Journal Article)

Scientific Reports (Nature PG), 6 (34589 ), 2016.

(Abstract | Links | BibTeX)

E, Barth; R, Hübler; A, Baniahmad; M, Marz

The Evolution of COP9 signalosome in unicellular and multicellular organisms (Journal Article)

Genome Biol Evol, 2016.

(Abstract | Links | BibTeX)

2012

Gimpel Matthias Preis Heike, Barth Emanuel Gramzow Lydia; Sabine, Brantl

SR1 — a small RNA with two remarkably conserved functions (Journal Article)

Nucleic Acids Research, 40 (22), pp. 11659–11672, 2012.

(Abstract | Links | BibTeX)

Conferences

10/2017 15th Herbstseminar der Bioinformatik, Doubice
04/2017 1st HACKEN Workshop, Jena
03/2017 1st EVBC Meeting, Jena
02/2017 32th TBI Winterseminar, Bled
10/2016 14th Herbstseminar der Bioinformatik, Doubice
02/2016 31th TBI Winterseminar, Bled
01/2016 ZAJ Symposium, Jena
10/2015 13th Herbstseminar der Bioinformatik, Doubice
08/2015 Central German Meeting on Bioinformatics 2015, Halle
02/2015 30th TBI Winterseminar, Bled
10/2014 12th Herbstseminar der Bioinformatik, Doubice

CV

since 12/2014 PhD. Student at Friedrich Schiller University, Jena
RNA Bioinformatics and High Throughput Analysis
10/2012 – 11/2014 Master of Science in Bioinformatics at Friedrich Schiller University, Jena
Master thesis: “Comparison of de novo transcriptome assemblers”
10/2009 – 09/2012 Bachelor of Science in Bioinformatics at Friedrich Schiller University, Jena
Bachelor thesis: “Homology search of small non-coding RNAs in Bacillus subtilis

Funding

Funded by the Thuringian country programme ProExzellenz (RegenerAging – FSU-I-03/14) of the Thuringian Ministry for Research (TMWWDG).