Sebastian Krautwurst
Sebastian Krautwurst

E-Mail: sebastian.krautwurst@uni-jena.de
Room: 08S01
Phone: +49-3641-9-46483

Publications

2021

Brandt, Christian; Krautwurst, Sebastian; Spott, Riccardo; Lohde, Mara; Jundzill, Mateusz; Marquet, Mike; Hölzer, Martin

poreCov - An Easy to Use, Fast, and Robust Workflow for SARS-CoV-2 Genome Reconstruction via Nanopore Sequencing Journal Article

In: Front Genet, vol. 12, pp. 711437, 2021.

Abstract | Links | BibTeX

Brandt, Christian; Krautwurst, Sebastian; Spott, Riccardo; Lohde, Mara; Jundzill, Mateusz; Marquet, Mike; Hölzer, Martin

poreCov - an easy to use, fast, and robust workflow for SARS-CoV-2 genome reconstruction via nanopore sequencing Journal Article

In: bioRxiv, 2021, (Now published in Frontiers in Genetics: https://dx.doi.org/10.3389/fgene.2021.711437).

Abstract | Links | BibTeX

Krautwurst, Sebastian; Dijkman, Ronald; Thiel, Volker; Krumbholz, Andi; Marz, Manja

Direct RNA Sequencing for Complete Viral Genomes Incollection

In: Frishman, Dmitrij; Marz, Manja (Ed.): Virus Bioinformatics, CRC Press, 2021.

Abstract | Links | BibTeX

2019

Mostajo, Nelly F.; Lataretu, Marie; Krautwurst, Sebastian; Mock, Florian; Desirò, Daniel; Lamkiewicz, Kevin; Collatz, Maximilian; Schoen, Andreas; Weber, Friedemann; Marz, Manja; Hölzer, Martin

A comprehensive annotation and differential expression analysis of short and long non-coding RNAs in 16 bat genomes Journal Article

In: NAR Genomics Bioinf, vol. 2, no. 1, pp. lqz006, 2019.

Abstract | Links | BibTeX

Viehweger, Adrian; Krautwurst, Sebastian; Lamkiewicz, Kevin; Madhugiri, Ramakanth; Ziebuhr, John; Hölzer, Martin; Marz, Manja

Direct RNA nanopore sequencing of full-length coronavirus genomes provides novel insights into structural variants and enables modification analysis. Journal Article

In: Genome Res, vol. 29, pp. 1545-1554, 2019.

Abstract | Links | BibTeX

Viehweger, Adrian; Krautwurst, Sebastian; Koenig, Brigitte; Marz, Manja

An encoding of genome content for machine learning Journal Article

In: bioRxiv, pp. 524280, 2019.

Abstract | Links | BibTeX