166 entries « 2 of 4 »

2020

Gerresheim, Gesche K.; Hess, Carolin S.; Shalamova, Lyudmila A.; Fricke, Markus; Marz, Manja; Andreev, Dmitri E.; Shatsky, Ivan N.; Niepmann, Michael

Ribosome Pausing at Inefficient Codons at the End of the Replicase Coding Region Is Important for Hepatitis C Virus Genome Replication Journal Article

In: Int J Mol Sci, vol. 21, no. 18, pp. 6955, 2020.

Abstract | Links | BibTeX | Tags: cancer, liver, ncRNAs, RNA structure, viruses

Collatz, Maximilian; Mock, Florian; Barth, Emanuel; Hölzer, Martin; Sachse, Konrad; Marz, Manja

EpiDope: A Deep Neural Network for linear B-cell epitope prediction Journal Article

In: Bioinformatics, vol. 37, no. 4, pp. 448–455, 2020.

Abstract | Links | BibTeX | Tags: machine learning, software, virus host interaction, viruses

Mock, Florian; Viehweger, Adrian; Barth, Emanuel; Marz, Manja

VIDHOP, viral host prediction with Deep Learning Journal Article

In: Bioinformatics, vol. 37, no. 3, pp. 318–325, 2020.

Abstract | Links | BibTeX | Tags: machine learning, software, virus host interaction, viruses

Schulte-Schrepping, Jonas; Reusch, Nico; Paclik, Daniela; Baßler, Kevin; Schlickeiser, Stephan; Zhang, Bowen; Krämer, Benjamin; Krammer, Tobias; Brumhard, Sophia; Bonaguro, Lorenzo; Domenico, Elena De; Wendisch, Daniel; Grasshoff, Martin; Kapellos, Theodore S.; Beckstette, Michael; Pecht, Tal; Saglam, Adem; Dietrich, Oliver; Mei, Henrik E.; Schulz, Axel R.; Conrad, Claudia; Kunkel, Désirée; Vafadarnejad, Ehsan; Xu, Cheng-Jian; Horne, Arik; Herbert, Miriam; Drews, Anna; Thibeault, Charlotte; Pfeiffer, Moritz; Hippenstiel, Stefan; Hocke, Andreas; Müller-Redetzky, Holger; Heim, Katrin-Moira; Machleidt, Felix; Uhrig, Alexander; Jarcy, Laure Bosquillon; Jürgens, Linda; Stegemann, Miriam; Glösenkamp, Christoph R.; Volk, Hans-Dieter; Goffinet, Christine; Landthaler, Markus; Wyler, Emanuel; Georg, Philipp; Schneider, Maria; Dang-Heine, Chantip; Neuwinger, Nick; Kappert, Kai; Tauber, Rudolf; Corman, Victor; Raabe, Jan; Kaiser, Kim Melanie; Vinh, Michael To; Rieke, Gereon; Meisel, Christian; Ulas, Thomas; Becker, Matthias; Geffers, Robert; Witzenrath, Martin; Drosten, Christian; Suttorp, Norbert; Kalle, Christof; Kurth, Florian; Händler, Kristian; Schultze, Joachim L.; Aschenbrenner, Anna C.; Li, Yang; Nattermann, Jacob; Sawitzki, Birgit; Saliba, Antoine-Emmanuel; Sander, Leif Erik; (DeCOI), Deutsche COVID-19 OMICS Initiative

Severe COVID-19 Is Marked by a Dysregulated Myeloid Cell Compartment Journal Article

In: Cell, vol. 182, no. 6, pp. 1419-1440.e23, 2020.

Abstract | Links | BibTeX | Tags: coronavirus, RNA / transcriptomics, viruses

Overholt, Will A.; Hölzer, Martin; Geesink, Patricia; Diezel, Celia; Marz, Manja; Küsel, Kirsten

Inclusion of Oxford Nanopore long reads improves all microbial and viral metagenome-assembled genomes from a complex aquifer system Journal Article

In: Environ Microbiol, vol. 22, no. 9, pp. 4000-4013, 2020.

Abstract | Links | BibTeX | Tags: assembly, DNA / genomics, groundwater, metagenomics, nanopore, viruses

Hölzer, Martin; Marz, Manja

PoSeiDon: a Nextflow pipeline for the detection of evolutionary recombination events and positive selection Journal Article

In: Bioinformatics, vol. 37, no. 7, pp. 1018-1020, 2020.

Abstract | Links | BibTeX | Tags: alignment, evolution, phylogenetics, software

Hufsky, Franziska; Lamkiewicz, Kevin; Almeida, Alexandre; Aouacheria, Abdel; Arighi, Cecilia; Bateman, Alex; Baumbach, Jan; Beerenwinkel, Niko; Brandt, Christian; Cacciabue, Marco; Chuguransky, Sara; Drechsel, Oliver; Finn, Robert D.; Fritz, Adrian; Fuchs, Stephan; Hattab, Georges; Hauschild, Anne-Christin; Heider, Dominik; Hoffmann, Marie; Hölzer, Martin; Hoops, Stefan; Kaderali, Lars; Kalvari, Ioanna; Kleist, Max; Kmiecinski, Rene; Kühnert, Denise; Lasso, Gorka; Libin, Pieter; List, Markus; Löchel, Hannah F.; Martin, Maria J.; Martin, Roman; Matschinske, Julian; McHardy, Alice C.; Mendes, Pedro; Mistry, Jaina; Navratil, Vincent; Nawrocki, Eric; O'Toole, Áine Niamh; Palacios-Ontiveros, Nancy; Petrov, Anton I.; Rangel-Piñeros, Guillermo; Redaschi, Nicole; Reimering, Susanne; Reinert, Knut; Reyes, Alejandro; Richardson, Lorna; Robertson, David L.; Sadegh, Sepideh; Singer, Joshua B.; Theys, Kristof; Upton, Chris; Welzel, Marius; Williams, Lowri; Marz, Manja

Computational Strategies to Combat COVID-19: Useful Tools to Accelerate SARS-CoV-2 and Coronavirus Research Journal Article

In: Preprints, 2020, (Now published in Brief Bioinform: https://dx.doi.org/10.1093/bib/bbaa232).

Abstract | Links | BibTeX | Tags: coronavirus, evolution, review, software, viruses

Samuel, Sheeba; Shadaydeh, Maha; Böcker, Sebastian; Brügmann, Bernd; Bucher, Solveig Franziska; Deckert, Volker; Denzler, Joachim; Dittrich, Peter; Eggeling, Ferdinand; Güllmar, Daniel; Guntinas-Lichius, Orlando; König-Ries, Birgitta; Löffler, Frank; Maicher, Lutz; Marz, Manja; Migliavacca, Mirco; Reichenbach, Jürgen R.; Reichstein, Markus; Römermann, Christine; Wittig, Andrea

A virtual "Werkstatt" for digitization in the sciences Journal Article

In: Res Ideas Outcomes, vol. 6, pp. e54106, 2020.

Abstract | Links | BibTeX | Tags: machine learning

Damme, Renaud Van; Hölzer, Martin; Viehweger, Adrian; Müller, Bettina; Bongcam-Rudloff, Erik; Brandt, Christian

Metagenomics workflow for hybrid assembly, differential coverage binning, transcriptomics and pathway analysis (MUFFIN) Journal Article

In: bioRxiv, 2020, (Now published in PLOS Comput Biol: https://dx.doi.org/10.1371/journal.pcbi.1008716).

Abstract | Links | BibTeX | Tags: annotation, assembly, classification, DNA / genomics, metagenomics, RNA / transcriptomics, software

Marz, Manja; Ibrahim, Bashar; Hufsky, Franziska; Robertson, David L. (Ed.)

Virus Bioinformatics Book

MDPI - Multidisciplinary Digital Publishing Institute, 2020, ISBN: 3039218824.

Links | BibTeX | Tags: viruses

Hölzer, Martin; Barf, Lisa-Marie; Lamkiewicz, Kevin; Vorimore, Fabien; Lataretu, Marie; Favaroni, Alison; Schnee, Christiane; Laroucau, Karine; Marz, Manja; Sachse, Konrad

Comparative Genome Analysis of 33 Chlamydia Strains Reveals Characteristic Features of Chlamydia Psittaci and Closely Related Species Journal Article

In: Pathogens, vol. 9, no. 11, pp. 899, 2020.

Abstract | Links | BibTeX | Tags: annotation, bacteria, DNA / genomics, software

Barth, Emanuel; Sieber, Patricia; Stark, Heiko; Schuster, Stefan

Robustness during Aging—Molecular Biological and Physiological Aspects Journal Article

In: Cells, vol. 9, no. 8, pp. 1862, 2020.

Abstract | Links | BibTeX | Tags: aging, review

Liebler-Tenorio, Elisabeth M.; Lambertz, Jacqueline; Ostermann, Carola; Sachse, Konrad; Reinhold, Petra

Regeneration of Pulmonary Tissue in a Calf Model of Fibrinonecrotic Bronchopneumonia Induced by Experimental Infection with Chlamydia psittaci Journal Article

In: Int J Mol Sci, vol. 21, no. 8, pp. 2817, 2020.

Abstract | Links | BibTeX | Tags: bacteria

Srivastava, Akash; Barth, Emanuel; Ermolaeva, Maria A.; Guenther, Madlen; Frahm, Christiane; Marz, Manja; Witte, Otto W.

Tissue-specific Gene Expression Changes Are Associated with Aging in Mice Journal Article

In: Genomics Proteomics Bioinformatics, vol. 18, no. 4, pp. 430–442, 2020.

Abstract | Links | BibTeX | Tags: aging, differential expression analysis, liver, RNA / transcriptomics

2019

Mostajo, Nelly F.; Lataretu, Marie; Krautwurst, Sebastian; Mock, Florian; Desirò, Daniel; Lamkiewicz, Kevin; Collatz, Maximilian; Schoen, Andreas; Weber, Friedemann; Marz, Manja; Hölzer, Martin

A comprehensive annotation and differential expression analysis of short and long non-coding RNAs in 16 bat genomes Journal Article

In: NAR Genomics Bioinf, vol. 2, no. 1, pp. lqz006, 2019.

Abstract | Links | BibTeX | Tags: annotation, assembly, differential expression analysis, evolution, ncRNAs, RNA / transcriptomics, virus host interaction, viruses

Hölzer, Martin; Schoen, Andreas; Wulle, Julia; Müller, Marcel A.; Drosten, Christian; Marz, Manja; Weber, Friedemann

Virus- and interferon alpha-induced transcriptomes of cells from the microbat Myotis daubentonii Journal Article

In: iScience, vol. 19, pp. 647-661, 2019.

Abstract | Links | BibTeX | Tags: differential expression analysis, RNA / transcriptomics, viruses

Morales-Prieto, Diana M.; Barth, Emanuel; Murrieta-Coxca, Jose Martín; Favaro, Rodolfo R.; Gutiérrez-Samudio, Ruby N.; Chaiwangyen, Wittaya; Ospina-Prieto, Stephanie; Gruhn, Bernd; Schleußner, Ekkehard; Marz, Manja; Markert, Udo R.

Identification of miRNAs and associated pathways regulated by Leukemia Inhibitory Factor in trophoblastic cell lines. Journal Article

In: Placenta, vol. 88, pp. 20–27, 2019.

Abstract | Links | BibTeX | Tags: differential expression analysis, ncRNAs, pregnancy

Srivastava, Akash

Whole-transcriptome changes in gene expression in multiple tissues across various organisms during aging PhD Thesis

2019.

Links | BibTeX | Tags: aging, differential expression analysis, RNA / transcriptomics

Viehweger, Adrian; Krautwurst, Sebastian; Lamkiewicz, Kevin; Madhugiri, Ramakanth; Ziebuhr, John; Hölzer, Martin; Marz, Manja

Direct RNA nanopore sequencing of full-length coronavirus genomes provides novel insights into structural variants and enables modification analysis. Journal Article

In: Genome Res, vol. 29, pp. 1545-1554, 2019.

Abstract | Links | BibTeX | Tags: assembly, coronavirus, nanopore, nucleic acid modifications, RNA / transcriptomics, viruses

Barth, Emanuel

Insights into the regulation of aging PhD Thesis

2019.

Abstract | Links | BibTeX | Tags: aging, differential expression analysis, RNA / transcriptomics, splicing

Dukhovny, Anna; Lamkiewicz, Kevin; Chen, Qian; Fricke, Markus; Jabrane-Ferrat, Nabila; Marz, Manja; Jung, Jae U.; Sklan, Ella H.

A CRISPR activation screen identifies genes protecting from Zika virus infection Journal Article

In: J Virol, vol. 93, no. 16, 2019.

Abstract | Links | BibTeX | Tags: pregnancy, RNA / transcriptomics, virus host interaction, viruses

Kallies, René; Hölzer, Martin; Toscan, Rodolfo Brizola; da Rocha, Ulisses Nunes; Anders, John; Marz, Manja; Chatzinotas, Antonis

Evaluation of Sequencing Library Preparation Protocols for Viral Metagenomic Analysis from Pristine Aquifer Groundwaters. Journal Article

In: Viruses, vol. 11, no. 6, pp. 484, 2019.

Abstract | Links | BibTeX | Tags: DNA / genomics, groundwater, metagenomics, viruses

Peter, Stephan; Hölzer, Martin; Lamkiewicz, Kevin; Fenizio, Pietro Speroni; Hwaeer, Hassan Al; Marz, Manja; Schuster, Stefan; Dittrich, Peter; Ibrahim, Bashar

Structure and Hierarchy of Influenza Virus Models Revealed by Reaction Network Analysis Journal Article

In: Viruses, vol. 11, no. 5, pp. 449, 2019.

Abstract | Links | BibTeX | Tags: virus host interaction, viruses

Hölzer, Martin; Marz, Manja

De novo transcriptome assembly: A comprehensive cross-species comparison of short-read RNA-Seq assemblers Journal Article

In: GigaScience, vol. 8, no. 5, pp. giz039, 2019.

Abstract | Links | BibTeX | Tags: assembly, RNA / transcriptomics

Hufsky, Franziska; Ibrahim, Bashar; Modha, Sejal; Clokie, Martha R. J.; Deinhardt-Emmer, Stefanie; Dutilh, Bas E.; Lycett, Samantha; Simmonds, Peter; Thiel, Volker; Abroi, Aare; Adriaenssens, Evelien M.; Escalera-Zamudio, Marina; Kelly, Jenna Nicole; Lamkiewicz, Kevin; Lu, Lu; Susat, Julian; Sicheritz, Thomas; Robertson, David L.; Marz, Manja

The Third Annual Meeting of the European Virus Bioinformatics Center Journal Article

In: Viruses, vol. 11, no. 5, pp. 420, 2019.

Abstract | Links | BibTeX | Tags: classification, conference report, evolution, metagenomics, software, virus host interaction, viruses

Gerresheim, Gesche; Bathke, Jochen; Michel, Audrey; Andreev, Dmitri; Shalamova, Lyudmila; Rossbach, Oliver; Hu, Pan; Glebe, Dieter; Fricke, Markus; Marz, Manja; Goesmann, Alexander; Kiniry, Stephen; Baranov, Pavel; Shatsky, Ivan; Niepmann, Michael

Cellular Gene Expression during Hepatitis C Virus Replication as Revealed by Ribosome Profiling Journal Article

In: Int J Mol Sci, vol. 20, no. 6, pp. 1321, 2019.

Abstract | Links | BibTeX | Tags: cancer, differential expression analysis, liver, RNA structure, virus host interaction, viruses

Barth, Emanuel; Srivastava, Akash; Stojiljkovic, Milan; Frahm, Christiane; Axer, Hubertus; Witte, Otto W; Marz, Manja

Conserved aging-related signatures of senescence and inflammation in different tissues and species. Journal Article

In: Aging, vol. 11, no. 19, pp. 8556—8572, 2019.

Abstract | Links | BibTeX | Tags: aging, liver, RNA / transcriptomics

Wegner, Carl-Eric; Gaspar, Michael; Geesink, Patricia; Herrmann, Martina; Marz, Manja; Küsel, Kirsten

Biogeochemical regimes in shallow aquifers reflect the metabolic coupling of elements of nitrogen, sulfur and carbon. Journal Article

In: Appl Environ Microbiol, vol. 85, no. 5, pp. e02346-18, 2019.

Abstract | Links | BibTeX | Tags: bacteria, groundwater, metagenomics

Sieber, Patricia; Barth, Emanuel; Marz, Manja

The landscape of the alternatively spliced transcriptome remains stable during aging across different species and tissues Journal Article

In: bioRxiv, pp. 541417, 2019.

Abstract | Links | BibTeX | Tags: aging, RNA / transcriptomics, splicing

Viehweger, Adrian; Krautwurst, Sebastian; Koenig, Brigitte; Marz, Manja

An encoding of genome content for machine learning Journal Article

In: bioRxiv, pp. 524280, 2019.

Abstract | Links | BibTeX | Tags: assembly, machine learning, metagenomics

Riege, Konstantin

Annotation of non-coding RNAs and examination of Next Generation Sequencing data of pathogenic organisms PhD Thesis

2019.

Links | BibTeX | Tags: annotation, bacteria, fungi, ncRNAs, RNA / transcriptomics

2018

Chen, Zhiyang; Amro, Elias Moris; Becker, Friedrich; Hölzer, Martin; Rasa, Seyed Mohammad Mahdi; Njeru, Sospeter Ngoci; Han, Bing; Sanzo, Simone Di; Chen, Yulin; Tang, Duozhuang; Tao, Si; Haenold, Ronny; Groth, Marco; Romanov, Vasily S.; Kirkpatrick, Joanna M.; Kraus, Johann M.; Kestler, Hans A.; Marz, Manja; Ori, Alessandro; Neri, Francesco; Morita, Yohei; Rudolph, K. Lenhard

Cohesin-mediated NF-κB signaling limits hematopoietic stem cell self-renewal in aging and inflammation Journal Article

In: J Exp Med, vol. 216, no. 1, pp. 152–175, 2018.

Abstract | Links | BibTeX | Tags: aging, differential expression analysis, DNA / genomics

Morales-Prieto, Diana M.; Stojiljkovic, Milan; Diezel, Celia; Streicher, Priska-Elisabeth; Roestel, Franziska; Lindner, Julia; Weis, Sebastian; Schmeer, Christian; Marz, Manja

Peripheral blood exosomes pass blood-brain-barrier and induce glial cell activation Journal Article

In: bioRxiv, pp. 471409, 2018.

Abstract | Links | BibTeX | Tags: aging, extracellular vesicles, liver, ncRNAs

Desiro, Daniel; Hölzer, Martin; Ibrahim, Bashar; Marz, Manja

SilentMutations (SIM): a tool for analyzing long-range RNA-RNA interactions in viral genomes and structured RNAs Journal Article

In: Virus Res, vol. 260, pp. 135-141, 2018.

Abstract | Links | BibTeX | Tags: RNA structure, RNA-RNA interactions, software, viruses

Lamkiewicz, Kevin; Barth, Emanuel; Marz, Manja; Ibrahim, Bashar

Identification of potential microRNAs associated with Herpesvirus family based on bioinformatic analysis Journal Article

In: bioRxiv, pp. 417782, 2018.

Abstract | Links | BibTeX | Tags: machine learning, ncRNAs, RNA / transcriptomics, viruses

Gerst, Ruman; Hölzer, Martin

PCAGO: An interactive web service to analyze RNA-Seq data with principal component analysis Journal Article

In: bioRxiv, pp. 433078, 2018.

Abstract | Links | BibTeX | Tags: annotation, differential expression analysis, RNA / transcriptomics, software

Morales-Prieto, Diana M.; Barth, Emanuel; Gutièrrez-Samudio, Ruby N.; Chaiwangyen, Wittaya; Ospina-Prieto, Stephanie; Gruhn, Bernd; Schleußner, Ekkehard; Marz, Manja; Markert, Udo R.

Identification of miRNAs and associated pathways regulated by Leukemia Inhibitory Factor in trophoblastic cell lines Journal Article

In: bioRxiv, pp. 410381, 2018, (Now published in Placenta: https://doi.org/10.1016/j.placenta.2019.09.005).

Abstract | Links | BibTeX | Tags: differential expression analysis, ncRNAs, pregnancy

Fricke, Markus; Gerst, Ruman; Ibrahim, Bashar; Niepmann, Michael; Marz, Manja

Global importance of RNA secondary structures in protein coding sequences Journal Article

In: Bioinformatics, vol. 35, no. 4, pp. 579–583, 2018.

Abstract | Links | BibTeX | Tags: evolution, RNA / transcriptomics, RNA structure, viruses

Ibrahim, Bashar; Arkhipova, Ksenia; Andeweg, Arno C; Posada-Céspedes, Susana; Enault, François; Gruber, Arthur; Koonin, Eugene V; Kupczok, Anne; Lemey, Philippe; McHardy, Alice C; McMahon, Dino P; Pickett, Brett E; Robertson, David L; Scheuermann, Richard H; Zhernakova, Alexandra; Zwart, Mark P; Schönhuth, Alexander; Dutilh, Bas E; Marz, Manja

Bioinformatics Meets Virology: The European Virus Bioinformatics Center's Second Annual Meeting Journal Article

In: Viruses, vol. 10, 2018.

Abstract | Links | BibTeX | Tags: conference report, evolution, software, viruses

Ibrahim, Bashar; McMahon, Dino P; Hufsky, Franziska; Beer, Martin; Deng, Li; Mercier, Philippe Le; Palmarini, Massimo; Thiel, Volker; Marz, Manja

A new era of virus bioinformatics Journal Article

In: Virus Res, vol. 251, pp. 86–90, 2018.

Abstract | Links | BibTeX | Tags: review, software, viruses

Hufsky, Franziska; Ibrahim, Bashar; Beer, Martin; Deng, Li; Mercier, Philippe Le; McMahon, Dino P; Palmarini, Massimo; Thiel, Volker; Marz, Manja

Virologists-Heroes need weapons Journal Article

In: PLoS Pathog, vol. 14, no. 2, pp. e1006771, 2018.

Abstract | Links | BibTeX | Tags: review, software, viruses

Hillmann, Falk; Forbes, Gillian; Novohradská, Silvia; Ferling, Iuliia; Riege, Konstantin; Groth, Marco; Westermann, Martin; Marz, Manja; Spaller, Thomas; Winckler, Thomas; Schaap, Pauline; Glöckner, Gernot

Multiple Roots of Fruiting Body Formation in Amoebozoa Journal Article

In: Genome Biol Evol, vol. 10, pp. 591–606, 2018.

Abstract | Links | BibTeX | Tags: evolution, RNA / transcriptomics

Graf, Laura; Dick, Alexej; Sendker, Franziska; Barth, Emanuel; Marz, Manja; Daumke, Oliver; Kochs, Georg

Effects of allelic variations in the human myxovirus resistance protein A on its antiviral activity Journal Article

In: J Biol Chem, vol. 293, no. 9, pp. 3056–3072, 2018.

Abstract | Links | BibTeX | Tags: viruses

Steinbach, D; Hölzer, Martin; Marz, Manja; Gajda, M; Rundstedt, F-C Von; Grimm, M-O

Analysis of molecular mechanism of progression of non-muscle-invasive bladder cancer (NMIBC) by genome-wide exome and UTR mutation analysis Journal Article

In: Eur Urol Suppl, vol. 17, no. 2, pp. e1523, 2018.

BibTeX | Tags: cancer

Hölzer, Martin

The dark art of next-generation sequencing : fundamental approaches for genomics, transcriptomics, and differential gene expression PhD Thesis

2018.

Links | BibTeX | Tags: differential expression analysis, DNA / genomics, RNA / transcriptomics

2017

Madhugiri, Ramakanth; Karl, Nadja; Petersen, Daniel; Lamkiewicz, Kevin; Fricke, Markus; Wend, Ulrike; Scheuer, Robina; Marz, Manja; Ziebuhr, John

Structural and functional conservation of cis-acting RNA elements in coronavirus 5'-terminal genome regions Journal Article

In: Virology, vol. 517, pp. 44–55, 2017.

Abstract | Links | BibTeX | Tags: coronavirus, phylogenetics, RNA / transcriptomics, RNA structure, viruses

Hölzer, Martin; Marz, Manja

Software Dedicated to Virus Sequence Analysis Journal Article

In: Adv Virus Res, vol. 99, pp. 233–257, 2017.

Abstract | Links | BibTeX | Tags: DNA / genomics, evolution, phylogenetics, review, RNA / transcriptomics, RNA structure, software, viruses

Baumgart, Mario; Barth, Emanuel; Savino, Aurora; Groth, Marco; Koch, Philipp; Petzold, Andreas; Arisi, Ivan; Platzer, Matthias; Marz, Manja; Cellerino, Alessandro

A miRNA catalogue and ncRNA annotation of the short-living fish Nothobranchius furzeri Journal Article

In: BMC Genomics, vol. 18, pp. 693, 2017.

Abstract | Links | BibTeX | Tags: aging, annotation, ncRNAs, RNA / transcriptomics

Möbius, Petra; Nordsiek, Gabriele; Hölzer, Martin; Jarek, Michael; Marz, Manja; Köhler, Heike

Complete Genome Sequence of JII-1961, a Bovine Mycobacterium avium subsp. paratuberculosis Field Isolate from Germany Journal Article

In: Genome Announc, vol. 5, no. 34, 2017.

Abstract | Links | BibTeX | Tags: assembly, bacteria, DNA / genomics

Fuchs, Jonas; Hölzer, Martin; Schilling, Mirjam; Patzina, Corinna; Schoen, Andreas; Hoenen, Thomas; Zimmer, Gert; Marz, Manja; Weber, Friedemann; Müller, Marcel A; Kochs, Georg

Evolution and Antiviral Specificities of Interferon-Induced Mx Proteins of Bats against Ebola, Influenza, and Other RNA Viruses Journal Article

In: J Virol, vol. 91, 2017.

Abstract | Links | BibTeX | Tags: evolution, phylogenetics, RNA / transcriptomics, virus host interaction, viruses

166 entries « 2 of 4 »