Clostridium acidurici 9a
Sequence 	.AAACTCCTGAGATGTTCGAGGGCTTATGGTAATTCAACCTACAGAGTTAATATGGGAGTCTGAGTTTAATATTGGATGATATGCCTAATTATAATAGGAAATCAAAAGATATTAGCAGGACACCCACCTGCAGAGATATGCGGGTGTGAATTAGCAAGGGCTCACGGCATTGCGGGAATAAA
6S RNA free 	.................................................................................................................................>....................................................
pRNA_annealed 	............................xxxxxxxxxxxxxx............................................................................................................................................
Borrelia burgdorferi B31
Sequence 	AAGCUCCUGGGAGGUUUAAUUUUAAGAAUUAGAGUUAUUUUUUUGCGACAUCUCAUAAAAUUUAGGAAUUUGAAUAUUUUUAGUCAAUGAUAGCCAAAAGCAAUUCAGAGGUUAAGAAUAAAAAUUCCGCCUUGAAAAAUAGCGCUAAAUAAAAAUGUUCUUAUGUUGGCUUUUUGGGAGUUUA
6S RNA free 	........................................................................................................................................................................................
pRNA_annealed 	...................................xxxxxxxxxxxxxxx......................................................................................................................................
Brachyspira pilosicoli 95/1000
Sequence 	AUCACUCUGCUUAGUACGUGAAGCGAUGACAUUCUUGCACCACUAUAAUUUAAUGCUAACGGGAUCUGGAGCGAAGCAUCAAUGAUAGGCUCGCCAUUAUCGCGAUAUGGUAUAGAGAAAUCAAGGUCAUGUUUCUGAAGAGCCCACCUAACUAUAAAGUUAGGUGCAUUUAUGUCGCAUACGGCUAAAGCGGAGCUUUU
6S RNA free 	................................................................................................................................................>......>................................................
pRNA_annealed 	.........................................xxxxxxxxxxxxxx.........................................................................................>.......................................................
Roseiflexus castenholzii DSM 13941
Sequence 	GCAACCCUACCCCGGUCGGGGGCGGUGUGUUGUUUCGAGCCAACACAGUUUCGAAGGGAGUUGUGCUCCGACAUCAUGGGCUAUGCGGCGGGCCGCAGAUACCCACGGGCCAGCACCCACCUGCCUUGUGCAGGUUCGAAACCUAUCCGUCUCACGCCGGCGGUGGGGUUUCU
6S RNA free 	........................................................................................................................>....................................................
Sulfurihydrogenibium YO3AOP1
Sequence 	GCTTACCTGCGGGGTACGATAGGGATGGTGTAGATTTTTCTGGGCTATAGACAAAGAAAAGGGAGGTCTACATTCTGTAAAGACCAGGTAGCTTCTCTACGAAGCTCGAAGGTCTTACAGTGCGACCACCCACTTATTGGGGCTGTGCTCAGAGCATGGCTAACCATCCCGTCGGCTTCTGTGGGGGCCTT
6S RNA free 	................................................................................................................................>..............................................................