miRDeep2

miRDeep home

Parameters used


miRDeep2 version2.0.0.8
Program call/mnt/prostlocal/programs/mirdeep/mirdeep2_0_0_8/bin/miRDeep2.pl /mnt/prostlocal2/projects/mh_bats_ncrna_annotation/2018/mirdeep2/pal/pal_short_name.fa /mnt/prostlocal2/projects/mh_bats_ncrna_annotation/2018/genomes/pal.renamed.fa.mirdeep_formated /mnt/prostlocal2/projects/mh_bats_ncrna_annotation/2018/mirdeep2/pal/pal_mapping.arf none none none
Reads/mnt/prostlocal2/projects/mh_bats_ncrna_annotation/2018/mirdeep2/pal/pal_short_name.fa
Genome/mnt/prostlocal2/projects/mh_bats_ncrna_annotation/2018/genomes/pal.renamed.fa.mirdeep_formated
Mappings/mnt/prostlocal2/projects/mh_bats_ncrna_annotation/2018/mirdeep2/pal/pal_mapping.arf
Reference mature miRNAsnone
Other mature miRNAsnone


Survey of miRDeep2 performance for score cut-offs -10 to 10
miRDeep2 scorefor details on how the log-odds score is calculated, see Friedlander et al., Nature Biotechnology, 2008. estimated signal-to-noisefor the given score cut-off, the signal-to-noise ratio is estimated as r = total miRNA hairpins reported / mean estimated false positive miRNA hairpins over 100 rounds of permuted controls. excision gearingthis is the minimum read stack height required for excising a potential miRNA precursor from the genome in this analysis.
1013.73
913.63
813.33
712.83
612.53
512.33
411.73
311.13
29.83
13.33
01.13
-10.93
-213
-30.93
-40.93
-50.83
-60.93
-70.93
-80.93
-90.93
-1013





novel miRNAs predicted by miRDeep2


provisional idthis is a provisional miRNA name assigned by miRDeep2. The first part of the id designates the chromosome or genome contig on which the miRNA gene is located. The second part is a running number that is added to avoid identical ids. The running number is incremented by one for each potential miRNA precursor that is excised from the genome. Clicking this field will display a pdf of the structure, read signature and score breakdown of the reported miRNA. miRDeep2 scorethe log-odds score assigned to the hairpin by miRDeep2 estimated probability that the miRNA candidate is a true positivethe estimated probability that a predicted novel miRNA with a score of this or higher is a true positive. To see exactly how this probability is estimated, mouse over the 'novel miRNAs, true positives' in the table at the top of the webpage. rfam alertthis field indicates if the predicted miRNA hairpin has sequence similarity to reference rRNAs or tRNAs. Warnings in this field should overrule the estimated probability that a reported miRNA is a true positive (previous field). total read countthis is the sum of read counts for the predicted mature, loop and star miRNAs. mature read countthis is the number of reads that map to the predicted miRNA hairpin and are contained in the sequence covered by the predicted mature miRNA, including 2 nts upstream and 5 nts downstream. loop read countthis is the number of reads that map to the predicted miRNA hairpin and are contained in the sequence covered by the predicted miRNA loop, including 2 nts upstream and 5 nts downstream. star read countthis is the number of reads that map to the predicted miRNA hairpin and are contained in the sequence covered by the predicted star miRNA, including 2 nts upstream and 5 nts downstream. significant randfold p-valuethis field indicates if the estimated randfold p-value of the excised potential miRNA hairpin is equal to or lower than 0.05 (see Bonnet et al., Bioinformatics, 2004). miRBase miRNAthis field displays the ids of any reference mature miRNAs for the species that map perfectly (full length, no mismatches) to the reported miRNA hairpin. If this is the case, the reported miRNA hairpin is assigned as a known miRNA. If not, it is assigned as a novel miRNA. If more than one reference mature miRNA maps to the miRNA hairpin, then only the id of the reference miRBase miRNA that matches the predicted mature sequence is output. example miRBase miRNA with the same seedthis field displays the ids of any reference mature miRNAs from related species that have a seed sequence identical to that of the reported mature miRNA. The seed is here defined as nucleotides 2-8 from the 5' end of the mature miRNA. If more than one reference mature miRNA have identical seed, then only the id of the miRNA that occurs last in the input file of reference mature miRNAs from related species is displayed. UCSC browserif a species name was input to miRDeep2, then clicking this field will initiate a UCSC blat search of the consensus precursor sequence against the reference genome. NCBI blastnclicking this field will initiate a NCBI blastn search of the consensus precursor sequence against the nr/nt database (non-redundant collection of all NCBI nucleotide sequences). consensus mature sequencethis is the consensus mature miRNA sequence as inferred from the deep sequencing reads. consensus star sequencethis is the consensus star miRNA sequence as inferred from the deep sequencing reads. consensus precursor sequencethis is the consensus precursor miRNA sequence as inferred from the deep sequencing reads. Note that this is the inferred Drosha hairpin product, and therefore does not include substantial flanking genomic sequence as does most miRBase precursors. precursor coordinateThe given precursor coordinates refer do absolute position in the mapped reference sequence
PAL_7794_15861 6.1e+6 11995082 11988775 0 6307 yes blast uauugcacuugucccggccugu agguugggaucgguugcaaugcu agguugggaucgguugcaaugcuguguuucuguaugguauugcacuugucccggccugu NW_006436811.1:19601968..19602027:+
PAL_12044_22596 5.6e+6 11015945 10701737 0 314208 yes blast aacauucaacgcugucggugagu accaccgaccguugacuguacc aacauucaacgcugucggugaguuugggauuugaaaaaaccaccgaccguugacuguacc NW_006441061.1:1516967..1517027:+
PAL_877_688 5.4e+6 10702511 10702399 0 112 yes blast aacauucaacgcugucggugagu accaucgaccguugauuguacc aacauucaacgcugucggugaguuuggaauuaaagucaaaaccaucgaccguugauuguacc NW_006429894.1:1373196..1373258:+
PAL_13473_28947 5.3e+6 10564239 10564158 0 81 yes blast uauugcacuugucccggccugu ggguggggauuuguugcauuacu ggguggggauuuguugcauuacuuguauuauucauaaaguauugcacuugucccggccugu NW_006442490.1:683071..683132:+
PAL_578_58 2.1e+6 4253734 4253595 1 138 yes blast ugagguaguagguuguauaguu cuauacaaucuacugucuuucc ugagguaguagguuguauaguuuuagggucacacccaccacugggagauaacuauacaaucuacugucuuucc NW_006429595.1:557483..557556:+
PAL_11609_21455 2.1e+6 4251638 4251459 0 179 yes blast ugagguaguagguuguauaguu cuauacaaucuacugucuuucc ugagguaguagguuguauaguuuggggcucugcccugcuaugggauaacuauacaaucuacugucuuucc NW_006440626.1:114656..114726:-
PAL_65597_36988 6.2e+5 1231583 1205396 0 26187 yes blast uguaaacauccucgacuggaagcu cuuucagucggauguuugcagc uguaaacauccucgacuggaagcugugaagccacggaugggcuuucagucggauguuugcagc NW_006494614.1:22209011..22209074:+
PAL_65594_35861 6.2e+5 1224841 1203608 0 21233 yes blast cacuagauugugagcuccugga aaggagcucacagucuauugag aaggagcucacagucuauugaguugcuuuucugacuuucccacuagauugugagcuccugga NW_006494611.1:6290598..6290660:+
PAL_14553_33941 6.1e+5 1207199 769709 0 437490 yes blast agcucggucugaggccccucagu ugaggggcagagagcgagacuuu ugaggggcagagagcgagacuuuucuauuuuccaaaagcucggucugaggccccucagu NW_006443570.1:20857585..20857644:+
PAL_1447_1497 5.6e+5 1113178 1106937 0 6241 no blast ucccugagacccuuuaaccuguga acaggugagguucuugggagc ucccugagacccuuuaaccugugaggacguccagggucacaggugagguucuugggagc NW_006430464.1:360075..360134:-
PAL_11609_21454 4.5e+5 889961 883780 7 6174 yes blast ugagguaguagguugugugguu cuauacaaccuacugccuuccc ugagguaguagguugugugguuucagggcagugauguugcccccuaggaagauaacuauacaaccuacugccuuccc NW_006440626.1:113751..113828:-
PAL_12508_23944 4.4e+5 872033 862544 100 9389 yes blast uucacaguggcuaaguucug agagcuuagcugauuggugaac agagcuuagcugauuggugaacagugacugguuuccgcuuuguucacaguggcuaaguucug NW_006441525.1:1518148..1518210:-
PAL_14121_32082 4.3e+5 846243 844530 18 1695 yes blast ugagguaguaguuugugcuguu cugcgcaagcuacugccuug ugagguaguaguuugugcuguuggucggguugugacauugcccgcuguggagauaacugcgcaagcuacugccuug NW_006443138.1:2049264..2049340:+
PAL_14553_34296 3.9e+5 774944 774153 0 791 yes blast aagcugccaguugaagaacugu aguucuucaguggcaagcuuu aguucuucaguggcaagcuuuauguccugacccagcuaaagcugccaguugaagaacugu NW_006443570.1:22310777..22310837:-
PAL_5349_8345 3.2e+5 631616 629429 0 2187 yes blast caacggaaucccaaaagcagcug cugcgcuuggauuucguuccc caacggaaucccaaaagcagcuguugucuccagagcauuccagcugcgcuuggauuucguuccc NW_006434366.1:483376..483440:-
PAL_14553_34069 3.0e+5 601944 600184 113 1647 yes blast uacccuguagauccgaauuugu caaauucguaucuaggggaau uacccuguagauccgaauuuguguaaggaauuuuguggucacaaauucguaucuaggggaau NW_006443570.1:4234253..4234315:-
PAL_10175_19691 2.7e+5 544339 543930 0 409 yes blast uccuguacugagcugccccgag cggggcagcucaguacaggau uccuguacugagcugccccgagcugggcacagugaagagccucggggcagcucaguacaggau NW_006439192.1:1990398..1990461:-
PAL_10175_19446 2.7e+5 537473 536723 1 749 yes blast uccuguacugagcugccccgag cggggcagcucaguacaggau uccuguacugagcugccccgaggcucuucacugugcccagcucggggcagcucaguacaggau NW_006439192.1:1990399..1990462:+
PAL_2193_2524 2.6e+5 510715 510595 4 116 yes blast uucaaguaauccaggauaggcu ccuauucuugguuacuugcacg uucaaguaauccaggauaggcugugcaggucccaaugggccuauucuugguuacuugcacg NW_006431210.1:10494650..10494711:+
PAL_13467_28188 2.1e+5 413793 413593 0 200 yes blast uacccuguagaaccgaauuugu agauucgauucuaggggaaua uacccuguagaaccgaauuugugugguauccacauagucacagauucgauucuaggggaaua NW_006442484.1:45806111..45806173:+
PAL_7277_14325 1.6e+5 331996 328517 0 3479 yes blast uguaaacauccccgacuggaagcu cuuucagucagauguuugcugc uguaaacauccccgacuggaagcuguaagaccgagcucagcuuucagucagauguuugcugc NW_006436294.1:2849227..2849289:-
PAL_14553_33812 1.5e+5 306438 286172 0 20266 yes blast uagcuuaucagacugauguugacu caacagcagucgaugggcugu uagcuuaucagacugauguugacuguugaaucucauggcaacagcagucgaugggcugu NW_006443570.1:12313937..12313996:+
PAL_65597_36990 1.5e+5 303901 281523 0 22378 yes blast uguaaacauccuacacucucagcu cugggagaaggcuguuuacucu uguaaacauccuacacucucagcuguggaaaguaagaaagcugggagaaggcuguuuacucu NW_006494614.1:22234408..22234470:+
PAL_1447_1501 1.1e+5 227698 216275 0 11423 no blast cacccguagaaccgaccuugcg caagcucgugucuguggguccg cacccguagaaccgaccuugcggggccuucgccgcacacaagcucgugucuguggguccg NW_006430464.1:360656..360716:-
PAL_578_60 1.0e+5 205205 205148 0 57 yes blast ugagguaguagauuguauaguu cuauacaaucuauugccuuccc ugagguaguagauuguauaguugugggguagugauuuuacccuguucaggagauaacuauacaaucuauugccuuccc NW_006429595.1:557860..557938:+
PAL_1447_1499 9.6e+4 189051 187907 35 1109 yes blast ugagguaggagguuguauaguu cuauacggccuccuagcuuucc ugagguaggagguuguauaguugaggaggacacccacggagaucacuauacggccuccuagcuuucc NW_006430464.1:360490..360557:-
PAL_4361_6939 8.6e+4 169404 169306 0 98 yes blast uagcagcacguaaauauuggcg accaauauuauugugcugcuuu uagcagcacguaaauauuggcguagugaaauaaauauuaaacaccaauauuauugugcugcuuu NW_006433378.1:3797204..3797268:-
PAL_5103_8168 8.6e+4 169224 169216 0 8 yes blast uagcagcacguaaauauuggcg ccaguauuaacugugcugcugaa uagcagcacguaaauauuggcguuaagauuuuuaaauuaucuccaguauuaacugugcugcugaa NW_006434120.1:3176870..3176935:+
PAL_7277_14351 8.4e+4 165617 102518 0 63099 yes blast ucgaggagcucacagucuagu cuagacugaagcuccuugagga ucgaggagcucacagucuaguaugucucauccccuacuagacugaagcuccuugagga NW_006436294.1:5895024..5895082:-
PAL_4361_6806 7.7e+4 152420 152322 6 92 yes blast ugagguaguagguuguaugguu cuguacaaccuucuagcuuucc ugagguaguagguuguaugguuuagaguuacacccugggaguuaacuguacaaccuucuagcuuucc NW_006433378.1:10578904..10578971:+
PAL_2916_4466 6.6e+4 129605 129549 0 56 yes blast agcuacaucuggcuacugggucuc ggcucaguagccaguguagauc ggcucaguagccaguguagauccugucuuuuguaaucaguagcuacaucuggcuacugggucuc NW_006431933.1:105973..106037:-
PAL_13480_29952 6.3e+4 124141 124074 18 49 yes blast ugcggggcuagggcuaacagca cuguugccacuaaccucaaccu ugcggggcuagggcuaacagcagucuuacugaagguuuccuggaaaccacacacaugcuguugccacuaaccucaaccu NW_006442497.1:7149324..7149403:+
PAL_12369_23693 6.2e+4 122611 107737 1 14873 no blast cauugcacuugucucggucuga aggcggagacuugggcaauugcu aggcggagacuugggcaauugcuggacgcugcccugggcauugcacuugucucggucuga NW_006441386.1:9352412..9352472:+
PAL_847_650 5.8e+4 115327 115323 0 4 yes blast aaaagcuggguugagagggcga gccuucucuucccgguucu gccuucucuucccgguucuucccggagucgggaaaagcuggguugagagggcga NW_006429864.1:4281173..4281227:-
PAL_14114_32024 5.8e+4 114855 114778 0 77 yes blast uauugcacucgucccggccucc agggacgggacgcggugcagugu agggacgggacgcggugcaguguuguucuuuuccccgccaauauugcacucgucccggccucc NW_006443131.1:1835626..1835689:-
PAL_7265_13037 5.0e+4 99781 99682 0 99 yes blast uagguaguuuccuguuguuggg ucgacagcacgacacugccuuc uagguaguuuccuguuguugggauccaccuuucucucgacagcacgacacugccuuc NW_006436282.1:19438687..19438744:-
PAL_13473_28925 4.5e+4 89646 88752 0 894 yes blast caaaacgugaggcgcugcuau cagcagcaauucauguuuugaa cagcagcaauucauguuuugaagugcuuuaaaagguucaaaacgugaggcgcugcuau NW_006442490.1:434107..434165:+
PAL_4361_6810 4.3e+4 84583 45301 0 39282 yes blast ucccugagacccuaacuuguga acaagucaggcucuugggaccu ucccugagacccuaacuugugagguauuuuaguaacaucacaagucaggcucuugggaccu NW_006433378.1:10623659..10623720:+
PAL_617_210 4.3e+4 84472 78786 87 5599 yes blast uguaaacauccuugacuggaagcu cuuucagucggauguuuacagc uguaaacauccuugacuggaagcuguaagguguucagaggagcuuucagucggauguuuacagc NW_006429634.1:850361..850425:+
PAL_2902_3535 3.4e+4 67758 67631 0 127 yes blast acuggacuuggagucagaaggcc cuccugacuacagguccugugu cuccugacuacagguccuguguguuaccucgaaauagcacuggacuuggagucagaaggcc NW_006431919.1:1555835..1555896:+
PAL_12381_23846 2.9e+4 58116 58100 0 16 yes blast aacauucauuguugucgguggg ccaccgagggaugaaugucac aacauucauuguugucgguggguugugaagauggaggccagacccaccgagggaugaaugucac NW_006441398.1:940396..940460:+
PAL_1026_905 2.7e+4 54130 54059 0 71 yes blast uagguaguuucauguuguuggg ucggcaacaagaaacugccuga uagguaguuucauguuguugggauugaguuuugaacucggcaacaagaaacugccuga NW_006430043.1:798972..799030:-
PAL_13190_27653 2.7e+4 53841 47357 0 6484 no blast cucggcguggcgucggucgugg ucgaccggaccucgaccggcu ucgaccggaccucgaccggcucgucuguguugccaaucgacucggcguggcgucggucgugg NW_006442207.1:12012511..12012573:+
PAL_2903_4209 2.7e+4 53738 53027 0 711 yes blast uucaaguaauucaggauagguu ccuguucuccauuacuuggcuc uucaaguaauucaggauagguugugugccauccagccuguucuccauuacuuggcuc NW_006431920.1:10700097..10700154:-
PAL_4361_6941 2.7e+4 53187 52225 0 962 yes blast uagcagcacaucaugguuuaca cgaaucauuauuugcugcucu uagcagcacaucaugguuuacauacuacagucgaugcgaaucauuauuugcugcucu NW_006433378.1:3797356..3797413:-
PAL_63014_34881 2.5e+4 50689 45511 0 5178 yes blast ucccugagacccuaacuuguga acggguuaggcucuugggag ucccugagacccuaacuugugauguuuaccguuuaaauccacggguuaggcucuugggag NW_006492031.1:1508328..1508388:-
PAL_11621_21778 2.5e+4 49220 49167 8 45 yes blast ugagguaguaguuuguacaguu cuguacaggccacugccuugcc ugagguaguaguuuguacaguuugagggucuaugauaccacccgguacaggagauaacuguacaggccacugccuugcc NW_006440638.1:25621373..25621452:+
PAL_12369_23692 2.4e+4 48904 48224 0 680 yes blast caaagugcuguucgugcagguag acugcugagcuagcacuucccga caaagugcuguucgugcagguagugugauuaccugaccuacugcugagcuagcacuucccga NW_006441386.1:9352205..9352267:+
PAL_1026_900 2.4e+4 48103 44822 14 3267 yes blast uccgagccugggucucccucu ggggguccccggugcucggau ggggguccccggugcucggaucucgagggugcuuauuguucgguccgagccugggucucccucu NW_006430043.1:756922..756986:-
PAL_2916_4464 2.3e+4 46806 45507 0 1299 yes blast agcuacauugucugcuggguuu accuggcauacaauguagguuucugu accuggcauacaauguagguuucuguguuuguuaggcaacagcuacauugucugcuggguuu NW_006431933.1:105228..105290:-
PAL_578_62 2.2e+4 43745 26425 15 17305 yes blast cuauacgaccugcuaccuuucu agagguaguagguugcauaguu agagguaguagguugcauaguuuuagggcagggauuuugcccacaaggagguaacuauacgaccugcuaccuuucu NW_006429595.1:559883..559959:+
PAL_12381_23888 2.0e+4 39629 39200 46 383 yes blast uucacaguggcuaaguuccg agggcuuagcugcuugugagca agggcuuagcugcuugugagcagggucugcaccaagucguguucacaguggcuaaguuccg NW_006441398.1:907547..907608:-
PAL_12508_23946 1.8e+4 36246 36121 0 125 yes blast aucacauugccagggauuaccacg ggguuccuggcaugcugauuu ggguuccuggcaugcugauuugugacuuaagauuaaaaucacauugccagggauuaccacg NW_006441525.1:1518380..1518441:-
PAL_8719_17000 1.7e+4 35141 33710 0 1431 yes blast gccccugggccuauccuagaa ucuagguauggucccagggau ucuagguauggucccagggaucccagaucaaaccaggccccugggccuauccuagaa NW_006437736.1:11820266..11820323:-
PAL_5808_9579 1.4e+4 29088 28951 7 130 yes blast accacaggguagaaccacggac cagugguuuuacccuaugguagg cagugguuuuacccuaugguagguuacgucaugcuguucuaccacaggguagaaccacggac NW_006434825.1:13265167..13265229:+
PAL_5822_10664 1.4e+4 28212 28207 0 5 no blast uuuggcaaugguagaacucgcacu gugguucuagacuugccaacu uuuggcaaugguagaacucgcacuggugagguaaugggaccggugguucuagacuugccaacu NW_006434839.1:9534789..9534852:+
PAL_2031_2254 1.4e+4 27965 27610 0 355 yes blast gagagaucagaggugcagagu ccugugccuuuuaccucuuuaa gagagaucagaggugcagagugcguuaauguuaaugaagccugugccuuuuaccucuuuaa NW_006431048.1:733019..733080:-
PAL_2893_2861 1.2e+4 24403 24333 17 53 yes blast cagugcaauguuaaaagggca gcucuuuucacauugugcuacu gcucuuuucacauugugcuacugucugcaccuaccacuagcagugcaauguuaaaagggca NW_006431910.1:622006..622067:+
PAL_12369_23689 1.0e+4 21033 19047 0 1986 yes blast ccgcacuguggguacuugcu uaaagugcugacagugcagau uaaagugcugacagugcagauagugauccucuccgugcuaccgcacuguggguacuugcu NW_006441386.1:9351974..9352034:+
PAL_12381_23844 1.0e+4 20991 18903 0 2088 yes blast aacauucaaccugucggugaguu accaucgaccguugaguggacc aacauucaaccugucggugaguuugggcaguucaggcaaaccaucgaccguugaguggacc NW_006441398.1:940221..940282:+
PAL_13473_28927 1.0e+4 20016 17694 0 2322 yes blast gaguauuguuucugcugcccgg uagcagcgggaacacuacug uagcagcgggaacacuacugcagugggcgaucggugcucuggaguauuguuucugcugcccgg NW_006442490.1:434430..434493:+
PAL_9096_18404 9.7e+3 19041 19037 0 4 yes blast uuagggcccuggcuccaucuccu aguggggcuucgacccuaacc uuagggcccuggcuccaucuccuuuaggaaaaccuucuguggggaguggggcuucgacccuaacc NW_006438113.1:18636681..18636746:+
PAL_13467_27917 9.6e+3 18829 12036 0 6793 yes blast ucacagugaaccggucucuuu cggggccguagcacugucugaga cggggccguagcacugucugagagguuuacauuucucacagugaaccggucucuuu NW_006442484.1:14513702..14513758:+
PAL_9854_18913 8.4e+3 16625 14843 0 1782 no blast ucccuguccuccaggagcuc agcuccucggggccagagccc ucccuguccuccaggagcucacuugugucugccgugagcuccucggggccagagccc NW_006438871.1:728038..728095:-
PAL_7282_15109 7.9e+3 15624 15074 0 550 yes blast augcaccugggcaaggauucuga uaauccuugcuaccugggugagagu uaauccuugcuaccugggugagagugcuuucugaaugcaaugcaccugggcaaggauucuga NW_006436299.1:317658..317720:+
PAL_7282_15105 7.9e+3 15623 15075 0 548 yes blast augcaccugggcaaggauucuga uaauccuugcuaccugggugagagu uaauccuugcuaccugggugagagugcuguuggaaugcaaugcaccugggcaaggauucuga NW_006436299.1:315851..315913:+
PAL_11609_21381 7.4e+3 14586 14585 0 1 yes blast acgcccuucccccccuucuuca aggagggaggagaugggc aggagggaggagaugggccaaguucccucugccuggaacgcccuucccccccuucuuca NW_006440626.1:785332..785391:+
PAL_5822_10649 7.2e+3 14252 14221 0 31 yes blast uagcaccaucugaaaucgguua acugauuucuuuugguguucag acugauuucuuuugguguucagagucaauacaauuuucuagcaccaucugaaaucgguua NW_006434839.1:8754035..8754095:+
PAL_8729_17152 6.2e+3 12326 12228 0 98 yes blast agcugguguugugaaucaggccg gcuacuucacaacaccagggu agcugguguugugaaucaggccgcugccgaucagagaacggcuacuucacaacaccagggu NW_006437746.1:2947908..2947969:+
PAL_4933_7898 6.2e+3 12265 12256 5 4 yes blast agcugguguugugaaucaggccg gcuauuucacgacaccaggguu agcugguguugugaaucaggccgacgggcagcgcauccucuuacccggcuauuucacgacaccaggguu NW_006433950.1:7115879..7115948:+
PAL_12936_24396 6.1e+3 11978 7141 0 4837 yes blast cacgcucaugcacacacccaca ugagugugugugugugagugu ugagugugugugugugagugugugucgcuccggguccacgcucaugcacacacccaca NW_006441953.1:9373142..9373200:-
PAL_13474_29415 5.9e+3 11599 11593 0 6 yes blast uuugguccccuucaaccagcugu agcugguaaaauggaaccaaau agcugguaaaauggaaccaaaucaacuguucgauggauuugguccccuucaaccagcugu NW_006442491.1:39932820..39932880:+
PAL_13090_26111 5.9e+3 11599 11593 0 6 yes blast uuugguccccuucaaccagcugu agcugguaaaauggaaccaaau agcugguaaaauggaaccaaaucgccucuucaauggauuugguccccuucaaccagcugu NW_006442107.1:24726015..24726075:+
PAL_1040_984 4.9e+3 9683 9675 0 8 yes blast agagguaaaaauuugauuugacu agcaaaucauuuuuuacucccc agagguaaaaauuugauuugacuaguuaaauacaucuagcaaaucauuuuuuacucccc NW_006430057.1:218727..218786:+
PAL_65592_35339 4.8e+3 9571 7342 0 2229 yes blast ucucacacagaaaucgcacccguc ggggugcuaucugugauugagggac ggggugcuaucugugauugagggacauggcaaacggaauugucucacacagaaaucgcacccguc NW_006494609.1:21347479..21347544:+
PAL_12381_23890 4.8e+3 9491 9232 0 259 no blast aucacauugccagggauuucca gggguuccuggggaugggauuu gggguuccuggggaugggauuugcugccugucacaaaucacauugccagggauuucca NW_006441398.1:907715..907773:-
PAL_7794_15852 4.7e+3 9384 8152 0 1232 yes blast caaagugcuuacagugcagguag acugcagugaaggcacuugua caaagugcuuacagugcagguagugauaugugcaucuacugcagugaaggcacuugua NW_006436811.1:19601269..19601327:+
PAL_6747_11683 4.3e+3 8562 3865 0 4697 yes blast agccacugcccaccgcacacug cugugcgugugacagcggcuga agccacugcccaccgcacacugcgcugcuccggacccacugugcgugugacagcggcuga NW_006435764.1:177246..177306:-
PAL_5811_9842 3.8e+3 7570 7377 133 60 no blast ucuggcuccgugucuucacuccc gagggagggacgggggcugugc ucuggcuccgugucuucacucccguguguguccgaggagggagggagggacgggggcugugc NW_006434828.1:3941801..3941863:+
PAL_9059_17941 3.8e+3 7571 6733 8 830 no blast ccaccuccccugcaaacgucca gacguuggcucugguggugau ccaccuccccugcaaacguccagugaugcagagguaauggacguuggcucugguggugau NW_006438076.1:4872165..4872225:-
PAL_14105_30858 3.7e+3 7425 7415 0 10 yes blast ugagguaguaaguuguauuguu cuauacaacuuacuacuuuccc ugagguaguaaguuguauuguugugggguagggauuuuaagccccaauuagaagauaacuauacaacuuacuacuuuccc NW_006443122.1:772544..772624:+
PAL_7277_14323 3.4e+3 6831 6407 0 424 yes blast uguaaacauccuacacucagcu cugggagguggauguuuacuuc uguaaacauccuacacucagcuguaauacauggauuggcugggagguggauguuuacuuc NW_006436294.1:2845052..2845112:-
PAL_7265_13018 3.2e+3 6441 5864 0 577 yes blast ucagugcacuacagaacuuugu aaaguucugagacacuccgacu aaaguucugagacacuccgacucugaauaugauagaagucagugcacuacagaacuuugu NW_006436282.1:18509078..18509138:-
PAL_13093_27236 3.1e+3 6123 5179 0 944 yes blast uccgguucucagggcuccauc aggaagcccuggaggggcuggagg aggaagcccuggaggggcuggaggugauggauguguuccuccgguucucagggcuccauc NW_006442110.1:1436741..1436801:-
PAL_4361_6804 2.9e+3 5874 5061 0 813 yes blast aacccguagauccgaucuugug caagcucgcuucuaugggucugu aacccguagauccgaucuuguggugaaguggaccgcacaagcucgcuucuaugggucugu NW_006433378.1:10578170..10578230:+
PAL_5822_10660 2.8e+3 5538 5343 1 194 yes blast uauggcacugguagaauucacug ugaauuaccgaagggccauaaa uauggcacugguagaauucacugugaacagucucggucagugaauuaccgaagggccauaaa NW_006434839.1:9530387..9530449:+
PAL_607_190 2.7e+3 5406 3561 0 1845 yes blast ucccccaggugcgauucugauuug uuaucagaaucuccagggguac uuaucagaaucuccagggguacuuauaauuugaaaaagucccccaggugcgauucugauuug NW_006429624.1:164823..164885:+
PAL_14550_33157 2.6e+3 5205 5070 0 135 yes blast gucaacacuugcugguuuccucu gggagccaugaaguauugauguu gggagccaugaaguauugauguuucugccaguuuagcgucaacacuugcugguuuccucu NW_006443567.1:2505831..2505891:+
PAL_12044_22924 2.4e+3 4723 4722 0 1 yes blast agaaugguuuguagccugacauuu aaguggcuauuucuacgcuc aaguggcuauuucuacgcucaguguucagaacagugagcacuaagaaugguuuguagccugacauuu NW_006441061.1:9613656..9613723:-
PAL_7794_15853 2.3e+3 4710 4487 0 223 no blast acugcccuaagugcuccuucug uaaggugcaucuagugcagauag uaaggugcaucuagugcagauagugaaguagauuagcaucuacugcccuaagugcuccuucug NW_006436811.1:19601407..19601470:+
PAL_7282_15101 2.3e+3 4564 4100 0 464 yes blast ccucccacacccaaggcuugca caugccuugaguguaggacugu caugccuugaguguaggacuguugccaucuuaauuacccucccacacccaaggcuugca NW_006436299.1:313095..313154:+
PAL_4699_7116 2.2e+3 4371 4370 0 1 yes blast aggcaagaugcuggcauagcug ugcuaugccaacauauugccauc aggcaagaugcuggcauagcuguugaacugagaaccugcuaugccaacauauugccauc NW_006433716.1:4348170..4348229:+
PAL_13480_30000 2.1e+3 4203 3871 26 306 no blast acugccccaggugcugcuggg cgcauccccuagggcauuggugu cgcauccccuagggcauugguguaaagcuggagacccacugccccaggugcugcuggg NW_006442497.1:3184346..3184404:-
PAL_14553_34254 2.0e+3 3957 2799 0 1158 yes blast uaaugccccuaaaaauccuuau agggacuuucaggggcagcugug agggacuuucaggggcagcuguguuuucugacucagucauaaugccccuaaaaauccuuau NW_006443570.1:18419558..18419619:-
PAL_14553_34255 1.9e+3 3785 3264 0 521 yes blast ugggucuuugcgggcgagauga aacuggccuacaaagucccagu ugggucuuugcgggcgagaugagggugucgauucaacuggccuacaaagucccagu NW_006443570.1:18433027..18433083:-
PAL_7794_15858 1.7e+3 3415 3406 0 9 yes blast uaaagugcuuauagugcagguag acugcauuaugagcacuuaaagu uaaagugcuuauagugcagguaguguuuaguuaucuacugcauuaugagcacuuaaagu NW_006436811.1:19601716..19601775:+
PAL_13473_28949 1.6e+3 3242 3211 0 31 yes blast aauugcacgguauccaucugu cggguggaucacgaugcaauuuu cggguggaucacgaugcaauuuugauuaguauaauaggagaaaaauugcacgguauccaucugu NW_006442490.1:683217..683281:+
PAL_7281_14900 1.5e+3 2963 2962 0 1 no blast ucuuugguuaucuagcuguauga ugugagggaagcgaguuguua ugugagggaagcgaguuguuaucuuugguuaucuagcuguauga NW_006436298.1:19415695..19415739:-
PAL_594_125 1.4e+3 2799 2416 1 382 yes blast uaacacugucugguaacgauguu caucuuaccggacagugcugga caucuuaccggacagugcuggauuucucggcuugacucuaacacugucugguaacgauguu NW_006429611.1:244596..244657:+
PAL_4007_6426 1.2e+3 2478 2197 0 281 yes blast cuccuggggcccgcacucucgc uggggagcggcccccgggcggg uggggagcggcccccgggcgggccucugcucuggccccuccuggggcccgcacucucgc NW_006433024.1:11375636..11375695:+
PAL_6746_11315 7.4e+2 1463 1381 0 82 yes blast aacuggcccacaaagucccgcu cgggguuuugagggcgagauga cgggguuuugagggcgagaugaguuuauguuuuauccaacuggcccacaaagucccgcu NW_006435763.1:3874020..3874079:+
PAL_12054_23476 6.2e+2 1227 1225 0 2 yes blast guacaguacugugauaacugaa cgguuaucaugguaccgaugcug cgguuaucaugguaccgaugcuguauaucugaaagguacaguacugugauaacugaa NW_006441071.1:12552175..12552232:-
PAL_12938_25108 6.2e+2 1213 1212 0 1 yes blast guacaguacugugauaacugaa caguuaucacagugcugaugc caguuaucacagugcugaugcuguccauucuaaagguacaguacugugauaacugaa NW_006441955.1:14854402..14854459:-
PAL_14553_34298 5.8e+2 1148 1088 1 59 yes blast uaacagucuacagccauggucg accguggcuuucgauuguuacu accguggcuuucgauuguuacugugggaaccggagguaacagucuacagccauggucg NW_006443570.1:22547910..22547968:-
PAL_9059_17944 5.5e+2 1089 925 0 164 yes blast aggggcuggcuuuccucuggu uggagagaaaggcaguuccuga uggagagaaaggcaguuccugaugguccccugcccaggggcuggcuuuccucuggu NW_006438076.1:4908991..4909047:-
PAL_14121_32131 5.4e+2 rRNA 1072 1006 0 66 no blast ccugguuaguacuuggaug aucucggaagcuaagcag aucucggaagcuaagcaggauugggccugguuaguacuuggaug NW_006443138.1:6512671..6512715:+
PAL_7794_15859 5.4e+2 1057 1048 0 9 yes blast ugugcaaauccaugcaaaacuga aguuuugcagguuugcauccagc aguuuugcagguuugcauccagcugugugauauucugcugugcaaauccaugcaaaacuga NW_006436811.1:19601851..19601912:+
PAL_65597_37795 5.0e+2 983 729 0 254 yes blast aaggagcuuacaaucuagcuggg caacuagacugugagcuucuaga aaggagcuuacaaucuagcuggggguaaacaacuugcacaugaacgcaacuagacugugagcuucuaga NW_006494614.1:49857456..49857525:-
PAL_7264_12531 4.0e+2 797 472 0 325 yes blast ucucugggccugugucuuaggcu caaagcacacggccugcagagagg ucucugggccugugucuuaggcucugcaagaugaaccgagcaaagcacacggccugcagagagg NW_006436281.1:1498134..1498198:-
PAL_12044_22738 3.8e+2 752 277 0 475 yes blast cauuauuacuuuugguacgcg ucguaccgugaguaauaaugcg cauuauuacuuuugguacgcgcugugacacuucaaacucguaccgugaguaauaaugcg NW_006441061.1:9573274..9573333:+
PAL_6747_11566 3.4e+2 672 620 0 52 yes blast uguaacagcaacuccaugugga ccaguggggcugcuguuaucugg uguaacagcaacuccauguggaagugcccacucauuccaguggggcugcuguuaucugg NW_006435764.1:6029462..6029521:+
PAL_13092_26639 3.1e+2 615 571 0 44 yes blast ucuaguaagaguggcaguugaag augcugacauauuuacuagagg augcugacauauuuacuagaggguaaaguuaauaaccuucuaguaagaguggcaguugaag NW_006442109.1:17725314..17725375:+
PAL_2899_3176 2.8e+2 566 559 0 7 no blast agcagcauuguacaggg cugaucuguuucugaga cugaucuguuucugagaucaaacagagcagcauuguacaggg NW_006431916.1:3005364..3005406:-
PAL_7282_15112 2.8e+2 549 538 0 11 yes blast uacccauugcauaucggaguug accuccugugugcauggauuaca uacccauugcauaucggaguugugaauucucaaagcaccuccugugugcauggauuaca NW_006436299.1:319701..319760:+
PAL_3434_5412 2.7e+2 528 527 0 1 yes blast agaguugagucuggacgucccg ugauuguccaaacgcaauucucga ugauuguccaaacgcaauucucgagucucuggcuccggccgagaguugagucuggacgucccg NW_006432451.1:4383853..4383916:-
PAL_12936_24469 2.4e+2 484 463 1 20 yes blast uugugcuugaucuaaccaugug caugguuccgucaagcacca uugugcuugaucuaaccaugugguugccagguaugaggaaaacaugguuccgucaagcacca NW_006441953.1:22064525..22064587:-
PAL_3207_4784 2.2e+2 441 440 0 1 yes blast uucccuuugucauccuuugccua gcagggacagcaaaggggugc uucccuuugucauccuuugccuagggcucugaguggggcagggacagcaaaggggugc NW_006432224.1:1648092..1648150:+
PAL_5822_10648 2.2e+2 441 381 4 56 yes blast gcugguuucauauggugguuuaga uagcaccauuugaaaucaguguu gcugguuucauauggugguuuagauuuaaauagugauugucuagcaccauuugaaaucaguguu NW_006434839.1:8753632..8753696:+
PAL_3928_6133 2.1e+2 423 318 0 105 yes blast accgauuucuccugguguucaga uagcaccauuugaaaucgguua accgauuucuccugguguucagagucuguuuuugucuagcaccauuugaaaucgguua NW_006432945.1:126677..126735:-
PAL_7282_15104 2.0e+2 404 382 18 4 yes blast caucccuugcaugguggagggu cucccacaugcaggguuugca caucccuugcaugguggagggugcacuugcugaaaaccccucccacaugcaggguuugca NW_006436299.1:313434..313494:+
PAL_12377_23800 2.0e+2 401 372 0 29 yes blast ucuacagugcacgugucuccagu ggagacgcggcccuguuggagu ucuacagugcacgugucuccaguguggcucagaggcuggagacgcggcccuguuggagu NW_006441394.1:263669..263728:+
PAL_14553_34078 1.9e+2 389 295 0 94 yes blast uagguaguuucuuguuguugggc caacgacauuaaaccacccga uagguaguuucuuguuguugggccucaauuucugaacacaacgacauuaaaccacccga NW_006443570.1:4286448..4286507:-
PAL_7794_15848 1.7e+2 rRNA 359 248 0 111 no blast cugaucucggaagcuaagc guuaguacuuggaugggag cugaucucggaagcuaagcaggauuaggccuaguuaguacuuggaugggag NW_006436811.1:18619803..18619854:+
PAL_7871_16504 1.7e+2 340 339 0 1 yes blast uggcagugucuuagcugguuguu aaucagcaaguauacugcccu uggcagugucuuagcugguuguugugagcaauggugaaggaagcaaucagcaaguauacugcccu NW_006436888.1:6598142..6598207:+
PAL_7871_16503 1.7e+2 346 339 0 7 no blast uggcagugucuuagcugguuguu ggccagcugugaguguuu ggccagcugugaguguuucuuuggcagugucuuagcugguuguu NW_006436888.1:6598121..6598165:+
PAL_4924_7317 1.5e+2 300 238 0 62 yes blast cagugccucggcagugcagcc gugcauugcuguugcauug gugcauugcuguugcauugcaugugugugaggcgggugcagugccucggcagugcagcc NW_006433941.1:5159647..5159706:+
PAL_2907_4306 1.4e+2 rRNA 295 291 0 4 no blast gaagcuaagcagggucgggc ccacccugaaugcgcccgauc ccacccugaaugcgcccgaucuugucugaucuuggaagcuaagcagggucgggc NW_006431924.1:113180..113234:+
PAL_6776_12150 1.4e+2 289 285 0 4 no blast gcggcgguggcggcggcggcggcgg gcuggcggcgcggagcug gcuggcggcgcggagcugcccuaccuugaugacggccgcgcagguggcggcgguggcggcggcggcggcgg NW_006435793.1:3197942..3198013:-
PAL_10174_19405 1.4e+2 281 280 0 1 yes blast uguaacagcaacuccaugugggc ccaguggagaugcuguuacuu uguaacagcaacuccaugugggcuguguaccaacuuccaguggagaugcuguuacuu NW_006439191.1:7895811..7895868:-
PAL_4699_7124 1.0e+2 206 201 0 5 yes blast ugugugugugugugugugugu uauacauauauauagagagagag uguguguguguguguguguguauaaguauauguauauauacauauauauagagagagag NW_006433716.1:264235..264294:-
PAL_4007_6480 1.0e+2 202 196 0 6 yes blast cuuuuugcggucugggcuugc aagcccuuaccccaaaaagca cuuuuugcggucugggcuugcuguacauaacucaauagccggaagcccuuaccccaaaaagca NW_006433024.1:17169865..17169928:+
PAL_5822_10865 1.0e+2 199 197 0 2 yes blast cuuuuugcggucugggcuugc aagcccuuaccccaaaaag cuuuuugcggucugggcuugcuguuccucucaacgauagucaggaagcccuuaccccaaaaag NW_006434839.1:10497608..10497671:-
PAL_9889_19082 8.9e+1 172 128 0 44 yes blast uggaagacuagugauuuuguuguu caacaaaucacagucugccaua uggaagacuagugauuuuguuguuuuuagauaacuaaaucgacaacaaaucacagucugccaua NW_006438906.1:4649459..4649523:+
PAL_13473_28929 8.7e+1 170 164 0 6 yes blast ucggggaucaucaugucacgag ugugacagauugauaacugaaag ucggggaucaucaugucacgagagaccauugugcacuugugacagauugauaacugaaag NW_006442490.1:439299..439359:+
PAL_7281_14854 6.8e+1 136 121 0 15 yes blast aaauaccgggugcuauaggcuu ggccugguuaguacuug ggccugguuaguacuugggagaccaccuagaaauaccgggugcuauaggcuu NW_006436298.1:13078404..13078456:-
PAL_5822_10848 6.4e+1 123 115 0 8 yes blast uuuuucauuauugcuccugacc ucaagagcaauaacgaaaaaug ucaagagcaauaacgaaaaauguuugucauaaaccguuuuucauuauugcuccugacc NW_006434839.1:9005534..9005592:-
PAL_7793_15472 6.1e+1 118 77 0 41 yes blast gagacugaugaguucccggga ugcaggaacuugugagucuccu ugcaggaacuugugagucuccuauugaaaaugaacaggagacugaugaguucccggga NW_006436810.1:2707475..2707533:+
PAL_65594_35802 5.4e+1 104 34 0 70 yes blast ccccaccuccucucuccucagg gugaggacucgggagguggag gugaggacucgggagguggagggugguguugccaggccguugucucagcucacuucuccccccaccuccucucuccucagg NW_006494611.1:2851153..2851234:+
PAL_5349_8283 4.4e+1 84 82 1 1 yes blast uccagcucccggcgcugcccacu caggcagcgcagguggcugagc caggcagcgcagguggcugagccccgcagcagcggccccgcaccagccgcucgguccagcucccggcgcugcccacu NW_006434366.1:992510..992587:+
PAL_11602_21311 4.1e+1 rRNA 90 53 0 37 no blast accgggugcuguaggca ccugguuaguacuugga ccugguuaguacuuggaagggagaccaccuagaaagaccgggugcuguaggca NW_006440619.1:766620..766673:+
PAL_14553_33820 3.8e+1 rRNA 74 73 0 1 yes blast cugaucucggacgcuaagcaggguc gccugguuagugcuuggaugg cugaucucggacgcuaagcagggucaggccugguuagugcuuggaugg NW_006443570.1:12812422..12812470:+
PAL_1447_1459 3.4e+1 73 38 0 35 no blast cucccucucugcgccccg uaggaaggcgccggcgggagu cucccucucugcgccccgcccgcccgcgguuccccagccccaggccgggagguaggaaggcgccggcgggagu NW_006430464.1:1629973..1630046:+
PAL_14107_30951 3.4e+1 73 64 0 9 no blast cugcccuggcccgagggaccgacu cggccccacgcaccaggguaaga cggccccacgcaccaggguaagagagagucucacuuccugcccuggcccgagggaccgacu NW_006443124.1:7230874..7230935:+
PAL_13480_29995 3.3e+1 62 23 0 39 yes blast uagcagcacagaaauauuggca ccaauauuggcugagcugcuccag uagcagcacagaaauauuggcacugggaagagagucugccaauauuggcugagcugcuccag NW_006442497.1:3032190..3032252:-
PAL_2541_2705 3.2e+1 61 58 0 3 yes blast acaguagucugcacauugguu cccaguguucagacuaccuguuc cccaguguucagacuaccuguucagggggcucugaauguguacaguagucugcacauugguu NW_006431558.1:621507..621569:+
PAL_14107_31048 3.2e+1 62 41 0 21 yes blast uuauaaagcaaugagacugauu uccgucucaguuacuuuauagcc uuauaaagcaaugagacugauugucauguguugugugugggauccgucucaguuacuuuauagcc NW_006443124.1:16120136..16120201:+
PAL_3928_6047 3.2e+1 61 58 0 3 yes blast acaguagucugcacauugguu cccaguguucagacuaccuguuc cccaguguucagacuaccuguucaggacaaugccguuguacaguagucugcacauugguu NW_006432945.1:15167118..15167178:+
PAL_2902_3533 2.8e+1 52 51 0 1 yes blast ugagaugaagcacuguagcu ggugcagugcugcaucucugguca ggugcagugcugcaucucuggucaguugggagucugagaugaagcacuguagcu NW_006431919.1:1368064..1368118:+
PAL_5349_8272 2.1e+1 39 37 0 2 yes blast gaacgaaauccaagcgcagcug gcugcuuuugggauuccguugcc gaacgaaauccaagcgcagcuggaaugcucuggagacaacagcugcuuuugggauuccguugcc NW_006434366.1:483378..483442:+
PAL_9057_17799 1.7e+1 32 26 0 6 yes blast uccgucgcagacuacggaccucu gaguuguguccuggucugc gaguuguguccuggucugcggggagguagaggacuccgucgcagacuacggaccucu NW_006438074.1:6923533..6923590:+
PAL_7871_16443 1.5e+1 27 22 2 3 yes blast cugggcagggcugggcagggc cugcucuccccccaccc cugcucuccccccacccaccccacccgcuucuugggcugggcagggcugggcagggcugggcagggc NW_006436888.1:2108394..2108461:+
PAL_3207_4840 1.5e+1 34 33 0 1 no blast cccggcggggaaggugg ccuggcacuggccgaggc ccuggcacuggccgaggcgcagagggacggaaggucaugugaucagaggcuccgaggcgcccggcggggaaggugg NW_006432224.1:1869743..1869819:-
PAL_1442_1129 1.3e+1 23 20 0 3 yes blast aacuguuugcagaggaaacugaga ucagucucaucugcaaagaag aacuguuugcagaggaaacugagacuuuauaacuacaucucagucucaucugcaaagaag NW_006430459.1:9522..9582:-
PAL_5349_8352 1.1e+1 20 17 1 2 yes blast gggcggcgguggcggcggc cgccugcccgcucccug cgccugcccgcucccugccgauuccugucgcacucaccucuuccgcggcggcggggccugggcucacgggcggcgguggcggcggc NW_006434366.1:1255142..1255228:-
PAL_14553_34279 1.1e+1 19 10 0 9 yes blast ugaggggccucagaccgagcuu gucucgcucucugccccucagc ugaggggccucagaccgagcuuuuggaaaauagaaaagucucgcucucugccccucagc NW_006443570.1:20857583..20857642:-
PAL_9059_17892 1.0e+1 26 22 0 4 no blast aaggcgcuggcugucuggagc cccugcaggucagugcgccagac aaggcgcuggcugucuggagccuggaugagcagcaggcccugcaggucagugcgccagac NW_006438076.1:5112982..5113042:+
PAL_1445_1310 9.3 16 15 0 1 yes blast gugggguuguaggacug gucugcagcugcagggg gugggguuguaggacugcuggugagacaggaugggggcucugggguuguggcuucuguuuuuggagugucugcagcugcagggg NW_006430462.1:4343340..4343424:+
PAL_12369_23750 6.9 16 11 0 5 yes blast uaauuuuauguauaagcuagu gagcuuuuucauaaaaguacag gagcuuuuucauaaaaguacaguauaauccaguaaaccuguaauuuuauguauaagcuagu NW_006441386.1:6192619..6192680:-
PAL_13467_27815 5.5 9 8 0 1 yes blast uuggcaucuggcacuauggacu cuccauggacucccagauguuagc cuccauggacucccagauguuagcaaccagcaccauggacucccagauguuggcaucuggcacuauggacu NW_006442484.1:897769..897840:+
PAL_6747_11774 5.3 15 14 0 1 no blast cccccuccugcucucuccucagg ugaaggguggggggugg ugaagggugggggguggagcuaagagugggggccaagugaacccucccaauacccccuccugcucucuccucagg NW_006435764.1:5528069..5528144:-
PAL_5808_9616 4.8 21 10 0 11 no blast uuuccuuugugaacucccacugu auuugggggccucaugggaaaga auuugggggccucaugggaaagagcuucugaacucuuuccuuugugaacucccacugu NW_006434825.1:15292088..15292146:+
PAL_7266_13337 4.7 6 5 0 1 yes blast ucaacaaaaucacugaugcuggagu ucagcaccaggauguuguugggga ucaacaaaaucacugaugcuggaguugcgugugucaucacucagcaccaggauguuguugggga NW_006436283.1:1301093..1301157:-
PAL_13100_27451 3.9 5 3 1 1 yes blast ccccugcccgccccgcccc ggcuggcggccccgggc ccccugcccgccccgccccgacccccagcucugggcagggaggcuggcggccccgggc NW_006442117.1:3495086..3495144:-
PAL_7269_13648 3.2 3 2 0 1 yes blast ggggcaggcggggccgg uggcuccagcuccgggg ggggcaggcggggccggccgcgguggcuccagcuccgggg NW_006436286.1:1154295..1154335:-
PAL_14553_33934 3.2 358 356 0 2 yes blast gaccgacagggccucggcugu ggccgaggcccgggccgguucccc gaccgacagggccucggcugugugcggaagggaggcggccgaggcccgggccgguucccc NW_006443570.1:20296235..20296295:+
PAL_1722_2138 3.0 14 14 0 0 yes blast gcggggucgcgggcggggc cgcugccccagaccccuuug cgcugccccagaccccuuuggcucuuggaaacucaguguuucggggcucagagccggcggggucgcgggcggggc NW_006430739.1:571102..571177:-
PAL_12936_24423 2.8 16 16 0 0 yes blast cccucccuccucucccucu agggcugggagguggg cccucccuccucucccucucgcuucucccuuucccggagaggggagagggcugggagguggg NW_006441953.1:14868934..14868996:-
PAL_1447_1458 2.8 22 21 1 0 yes blast ucucccaacccuuguaccagug cugguacaggcauggggggca ucucccaacccuuguaccaguggugugcugcggucccugguacaggcauggggggca NW_006430464.1:1540926..1540983:+
PAL_13474_29762 2.8 20 20 0 0 yes blast ggggccgggccgggccgggcc cugcccggggaggcuuccg cugcccggggaggcuuccgcacgggggccgggccgggccgggcc NW_006442491.1:40092448..40092492:-
PAL_6832_12337 2.8 285 285 0 0 yes blast ccuccuucccccggccc gcgggggacaggagaacaguc gcgggggacaggagaacagucuguaccacacagccuccuucccccggccc NW_006435849.1:566722..566772:+
PAL_14113_31411 2.8 20 20 0 0 yes blast ugugcauguguguguauauaug ugugcacacgugcacaugcacaug ugugcauguguguguauauaugugugugcacuugugcacacgugugcacacgugcacaugcacaug NW_006443130.1:678711..678777:-
PAL_5811_9845 2.7 1702 1702 0 0 yes blast acugcugaccuugacug gaggggucaggaggcucg gaggggucaggaggcucggccucagcugacugcugaccuugacug NW_006434828.1:4147213..4147258:+
PAL_7277_14298 2.7 49 49 0 0 yes blast cgcucacgccgccucggcccg ggccgcggcgcgccccucgcc cgcucacgccgccucggcccgcaggauaucauccaugacccgggccgcggcgcgccccucgcc NW_006436294.1:7924493..7924556:+
PAL_7266_13324 2.7 39 39 0 0 yes blast cggggccgggggugggguc ccccuccuccggccccaca ccccuccuccggccccacauggaccaggcuccuuucccggggccgggggugggguc NW_006436283.1:568570..568626:-
PAL_5831_10990 2.7 33 33 0 0 yes blast uccccucuucccuguccuccagu cgggggucaggaagagguggggg cgggggucaggaagaggugggggugccagcuuccccucuucccuguccuccagu NW_006434848.1:201613..201667:-
PAL_4932_7705 2.7 28 26 0 2 yes blast cagugcaaugauauugucaaagc gcucugacgagguugcacuacu gcucugacgagguugcacuacuuugcucuaagaagcagugcaaugauauugucaaagc NW_006433949.1:7277377..7277435:+
PAL_11625_22150 2.6 428 428 0 0 yes blast ucuccgccaccuccaccucggc ggaggcgguguuggcggcagcgg ggaggcgguguuggcggcagcgguugucucugccucuccgccaccuccaccucggc NW_006440642.1:2777165..2777221:-
PAL_5818_10307 2.6 12 12 0 0 yes blast agcgcgccggccccgcgggc ccgggggcgagggaaggcuca ccgggggcgagggaaggcucaaaucugcggugauagcgccucuggagugagcgcgccggccccgcgggc NW_006434835.1:10722908..10722977:+
PAL_13474_29679 2.6 13 13 0 0 yes blast caggacccaggacccaggaccca ggccugggaucugggcuggg caggacccaggacccaggacccagggauaacacugcaugggcagcagggagcugggccugggaucugggcuggg NW_006442491.1:32122082..32122156:-
PAL_13491_30115 2.6 202 158 44 0 yes blast cggggggcccgcgggcccg gagcugcgcugcucccggc cggggggcccgcgggcccgggcggggcugggcucgccccgcguccccucaagcuuugcccgcccggagcugcgcugcucccggc NW_006442508.1:8015376..8015460:+
PAL_4924_7338 2.6 14 14 0 0 yes blast cagggcagggcagggcagggaa cucucccugcuuccccuccc cagggcagggcagggcagggaagcuucuucucucccugcuuccccuccc NW_006433941.1:6363270..6363319:+
PAL_13480_29997 2.6 254 249 5 0 yes blast cagcagcacacugugguuugua caaaccacacugugguguuagagcgag cagcagcacacugugguuuguacggcacuguggccacguccaaaccacacugugguguuagagcgag NW_006442497.1:3032508..3032575:-
PAL_7797_16367 2.6 19 19 0 0 yes blast ucugccgccgccgccgccgccgcc cggcggggcgggggugcagggc ucugccgccgccgccgccgccgccacuuuuccacguccuccucccnnnnnnnnnnnnnnncggucugcggcggggcgggggugcagggc NW_006436814.1:633252..633341:-
PAL_65597_37873 2.6 76 76 0 0 yes blast cagggcugggcugggcuggg cugcccaccagccccugc cagggcugggcugggcuggguggacugugcagccugcccaccagccccugc NW_006494614.1:63014133..63014184:-
PAL_14208_32940 2.5 18 18 0 0 yes blast ccgggcugggcugggcugggc ccagcauuagcgcaucucaaaa ccagcauuagcgcaucucaaaaacuaggaguccgggcugggcugggcugggc NW_006443225.1:20987145..20987197:-
PAL_6747_11702 2.5 137 100 0 37 yes blast gcggaguagcuggcagcca uggacagcggucugccgggc gcggaguagcuggcagccacgggcaaguggacagcggucugccgggc NW_006435764.1:1097694..1097741:-
PAL_11621_22056 2.5 3684 3684 0 0 yes blast uguguauguguguguauauaug uauauacacauauauauacaua uauauacacauauauauacauauauauacacauauauguauguguguguguauguguguguauauaug NW_006440638.1:27897533..27897601:-
PAL_3928_5894 2.5 16 16 0 0 yes blast uccuucauuccaccggagucugu agauuucaguggagugaaguuca uccuucauuccaccggagucugucucguacccaaccagauuucaguggagugaaguuca NW_006432945.1:1472317..1472376:+
PAL_14553_34300 2.5 77 77 0 0 yes blast uaacagucuccagucacggcc ccuuggcucuagacugcuuacu ccuuggcucuagacugcuuacugcccgggccgcccucaguaacagucuccagucacggcc NW_006443570.1:22548322..22548382:-
PAL_7282_15113 2.5 132 132 0 0 yes blast augcaccugggcaaggauu uccuugcuaucugggugcuagu uccuugcuaucugggugcuagugcugucucaaugcaaugcaccugggcaaggauu NW_006436299.1:329959..330014:+
PAL_65597_37640 2.5 166 166 0 0 yes blast uugguccccuucaaccagc uggucaaacggaaccaagu uggucaaacggaaccaaguccgucuuccugagagguuugguccccuucaaccagc NW_006494614.1:33908793..33908848:-
PAL_12044_22710 2.5 12 12 0 0 yes blast uggugguggugggggggugc gcacccuccaucuccuuucugcacc uggugguggugggggggugcucaucucagcauggccagagcgcacccuccaucuccuuucugcacc NW_006441061.1:7502525..7502591:+
PAL_11602_21305 2.5 581 581 0 0 yes blast aauggcgccacuaggguug acccuaggaaugugugccauuca acccuaggaaugugugccauucacauagacuaaaauugaauggcgccacuaggguug NW_006440619.1:144742..144799:+
PAL_1713_1908 2.5 28 28 0 0 yes blast gcgcggggcggggcggggcggg cgcugugccagggacuggcca cgcugugccagggacuggccaaugcgcggggcggggcggggcggg NW_006430730.1:797582..797627:-
PAL_5822_10662 2.5 34 34 0 0 yes blast uuuggcacuagcacauuuuugcu caaucaugugcagugccaauau uuuggcacuagcacauuuuugcuugugucucuucgcucugagcaaucaugugcagugccaauau NW_006434839.1:9530612..9530676:+
PAL_7266_13423 2.5 110 110 0 0 yes blast gugugugugugugugugugu acacacacacacacauaugu guguguguguguguguguguauacauacgcauacacacacacacacauaugu NW_006436283.1:9376279..9376331:-
PAL_12044_22814 2.5 18 18 0 0 yes blast auucccagggcugugcu cagggcgugggagucc cagggcgugggagucccacauggcuagaccagagaacugguucugcagaauucccagggcugugcu NW_006441061.1:2956685..2956751:-
PAL_847_531 2.5 13 13 0 0 yes blast caggacccaggacccaggaccca ggauguugggucugggggaaucugaggg ggauguugggucugggggaaucugaggggcucuggaggagaguaccaggacccaggacccaggaccca NW_006429864.1:840183..840251:+
PAL_14553_33931 2.4 22 22 0 0 yes blast cuggccccacccucagcc cuggggagucggcuagac cuggggagucggcuagaccaggaagcacccgccugucagggugaggagucucucuggccccacccucagcc NW_006443570.1:20127033..20127104:+
PAL_5349_8270 2.4 29 28 0 1 yes blast ccuccacgucuuugugcuugcgg agaggcuguggggggug ccuccacgucuuugugcuugcgguggaagugccagagcuggaagaggcuguggggggug NW_006434366.1:478411..478470:+
PAL_2902_3893 2.4 463 463 0 0 yes blast uugugcuugaucuaaccaugug caugguucugucaagcaccgcg uugugcuugaucuaaccaugugguggaacgauggaaacggaacaugguucugucaagcaccgcg NW_006431919.1:14927696..14927760:-
PAL_14113_31404 2.4 12 12 0 0 yes blast gcagcuggcaguggggcg ccccacuggcggucacca ccccacuggcggucaccacaaaacagcaagggaaaagcccagagggaggcagcuggcaguggggcg NW_006443130.1:51375..51441:-
PAL_13495_30389 2.4 23165 23165 0 0 yes blast ucucgcuggggccucca uaggucuuagggaaaac uaggucuuagggaaaacuucccuccucccucuggggaguaucucgcuggggccucca NW_006442512.1:1240026..1240083:+
PAL_594_127 2.4 4872 4872 0 0 yes blast uaauacugucugguaaugccg ucuuaccagacacgguuaga ucuuaccagacacgguuagaccuggguccuucugucuaauacugucugguaaugccg NW_006429611.1:245888..245945:+
PAL_594_123 2.4 83715 77658 0 6057 yes blast uaauacugccugguaaugaugac caucuuacugggcagcauugga caucuuacugggcagcauuggauggagucuggucucuaauacugccugguaaugaugac NW_006429611.1:244024..244083:+
PAL_14208_32947 2.4 4407 4407 0 0 yes blast ugagugugugugugugagugu gcgcgcgcacacacgcucaag ugagugugugugugugagugugcgcgcgcgcacacacgcucaag NW_006443225.1:22018908..22018952:-
PAL_4361_6852 2.4 131810 131810 0 0 yes blast uuaaugcuaaucgugauagggguu cuccuacauguuagcauuaaca uuaaugcuaaucgugauagggguuuuaccuccgacugacuccuacauguuagcauuaaca NW_006433378.1:16389165..16389225:+
PAL_7795_16232 2.4 76 76 0 0 yes blast gggggcggggaggggggca ccccacauucccgcuucuuc ccccacauucccgcuucuucuuucugcucaauucagggcuccccagccccugaccugcuugagauuggggggcggggaggggggca NW_006436812.1:4926058..4926144:-
PAL_13495_30522 2.4 23052 23052 0 0 yes blast ucucgcuggggccucca gagccccucugcuccagc gagccccucugcuccagccuggccgagccaccaguccggcggcucaaagggccagcgugguuggaaucucgcuggggccucca NW_006442512.1:1875239..1875322:-
PAL_7793_15496 2.4 25 25 0 0 yes blast uggagugugacaaugguguuu acgccauuaucacacuaaaua uggagugugacaaugguguuuguguccaaacuaucaaacgccauuaucacacuaaaua NW_006436810.1:6600083..6600141:+
PAL_3218_5041 2.3 18 18 0 0 yes blast acucaaacugugggggcacuu gugccgccauuuuuugaguuu acucaaacugugggggcacuuucuuuucugacuacgaaagugccgccauuuuuugaguuu NW_006432235.1:293374..293434:-
PAL_5692_9320 2.3 17 17 0 0 yes blast cgguggcgguggcggcggc cgcuccagccaccgccuccucg cgcuccagccaccgccuccucgcucaccuuguccgcaccccucacucuugagaaacgguggcgguggcggcggc NW_006434709.1:12931565..12931639:-
PAL_5356_8858 2.3 28 28 0 0 yes blast ggcggcgggcggcgggcggc ccccgcucugcccgcccccga ccccgcucugcccgcccccgagaacccaucagcguaggcggcgggcggcgggcggc NW_006434373.1:1543364..1543420:-
PAL_11609_21368 2.3 1367 1367 0 0 yes blast ggcaguagguuguauaguua accacacaaccuacuaccuc ggcaguagguuguauaguuaucuuccuagggggcaacaucacugcccugaaaccacacaaccuacuaccuc NW_006440626.1:113756..113827:+
PAL_1447_1539 2.3 206856 206850 6 0 yes blast aaccccaugcaccgcucugagaccu gaucagaaauuauguucuguugggguaac aaccccaugcaccgcucugagaccuacuguccgcucccuccucgggucgggggcugugggaucagaaauuauguucuguugggguaac NW_006430464.1:1550365..1550453:-
PAL_5822_10923 2.3 24554 24554 0 0 yes blast ucccuguucgggcgcca guaccugaaugggggag ucccuguucgggcgccacuugucggaaaccagccgaccaagucaaaccagguaccugaaugggggag NW_006434839.1:20531681..20531748:-
PAL_11609_21468 2.3 13 13 0 0 yes blast ggcccccucugcccacc ccugcaaaggggcaggccgc ccugcaaaggggcaggccgcucccccccgccaagacgccaccaccgcggcccccucugcccacc NW_006440626.1:999104..999168:-
PAL_8719_17026 2.3 12 12 0 0 yes blast acacuguacuggaagauggacc gccaucuuuaccagacaguguua gccaucuuuaccagacaguguuaggagcuucacaauuagaccauccaacacuguacuggaagauggacc NW_006437736.1:13553202..13553271:-
PAL_12936_24292 2.3 40 40 0 0 yes blast ucaggucccuguucgggugcca guaaucgaggguaccugaaa ucaggucccuguucgggugccacuugucggagccagcugacaaaguaaucgaggguaccugaaa NW_006441953.1:30831062..30831126:+
PAL_13190_27543 2.3 12 12 0 0 yes blast ucagagaggaagggagaga ucucucauucucucucucu ucucucauucucucucucuccaggcaccgaccugagugggugcaucccugagguuccugggcaauucagagaggaagggagaga NW_006442207.1:229993..230077:+
PAL_5692_9411 2.2 37 37 0 0 yes blast uucuaaugugcagccaagguug accuuggcuguagaccaauauc uucuaaugugcagccaagguugauaaccuuggcuguagaccaauauc NW_006434709.1:23105593..23105640:-
PAL_4930_7482 2.2 rRNA 912 912 0 0 yes blast ccugguuaguacuuggaug ucugggaagaccaggug ccugguuaguacuuggaugggaggcuaucugggaagaccaggug NW_006433947.1:65811..65855:-
PAL_12938_24950 2.2 15 13 2 0 yes blast gggcuagggcucacagcu cuucuccucaggcccug gggcuagggcucacagcuuccucugccggcccuggacacuccaugucggccccccaagcuucuccucaggcccug NW_006441955.1:36664211..36664286:+
PAL_4932_7730 2.2 74 74 0 0 yes blast cagggcugggcugggcuggg cagcaggugucugggccugac cagcaggugucugggccugacgcagcagggcugggcugggcuggg NW_006433949.1:649779..649824:-
PAL_7281_14899 2.2 2962 2962 0 0 yes blast ucuuugguuaucuagcuguauga auaaagcuagauaaccgaaagua ucuuugguuaucuagcuguaugaguguauuggucuucauaaagcuagauaaccgaaagua NW_006436298.1:19415658..19415718:-
PAL_1709_1742 2.2 2962 2962 0 0 yes blast ucuuugguuaucuagcuguauga auaaagcuagauaaccgaaagu ucuuugguuaucuagcuguaugagugccacagagccgucauaaagcuagauaaccgaaagu NW_006430726.1:2942557..2942618:+
PAL_4933_7929 2.2 189 166 23 0 yes blast ugugugugugugugugugugu auauauauacacacacauaua uguguguguguguguguguguacguguguguguacguguguauauauauacacacacauaua NW_006433950.1:8988968..8989030:+
PAL_65594_35913 2.2 50 50 0 0 yes blast ucuggcugcuauggcccccucc ggaggugccauucugagggccaggagu ggaggugccauucugagggccaggaguuugauuauguaucacucuggcugcuauggcccccucc NW_006494611.1:11070052..11070116:+
PAL_13467_28709 2.2 24 24 0 0 yes blast cggggcggggcgcggcggg agccguccaccucgcg cggggcggggcgcggcggggaguagccguccaccucgcg NW_006442484.1:50298580..50298619:-
PAL_7871_16612 2.2 61 61 0 0 yes blast ugcccccugguggucagu ugcacugccuuggagcacg ugcacugccuuggagcacgucugcccccugguggucagu NW_006436888.1:4388017..4388056:-
PAL_14550_33229 2.2 12628 12628 0 0 yes blast acuagauugugagcuccuggca ccagagcugacagugggugc acuagauugugagcuccuggcaagcaaggugggucccauuuaucuuuguguuuccagagcugacagugggugc NW_006443567.1:3075257..3075330:-
PAL_10740_20764 2.2 rRNA/tRNA 414 414 0 0 yes blast guuagcacgucugcuuu ugcagaugguccugaguu guuagcacgucugcuuuaaaugcagaugguccugaguu NW_006439757.1:7579318..7579356:+
PAL_12938_25149 2.2 73784 73782 0 2 yes blast caaagaauucuccuuuugggcuu cccaaaggugaauuuuuugggaa caaagaauucuccuuuugggcuuucugaguuuauuuuaagcccaaaggugaauuuuuugggaa NW_006441955.1:19186540..19186603:-
PAL_617_228 2.2 22 19 3 0 yes blast gcaaaagguccuggguucg uacccagggcucguggggu gcaaaagguccuggguucgagccccagcagagcugcggcccauacccagggcucguggggu NW_006429634.1:1962260..1962321:+
PAL_11803_22560 2.2 11 11 0 0 yes blast gcggcgguggcagcggcgg gcucgcuuuucccgccgccauuu gcucgcuuuucccgccgccauuuucuuuuccucaucaccgaaagcggcgguggcagcggcgg NW_006440820.1:1631910..1631972:-
PAL_6747_11574 2.2 11 11 0 0 yes blast cugggcugggcugggcuggg ccucagcuggggagagca cugggcugggcugggcugggcugucccuccuucgggauagaaagacuuauucccagccccuuggagggucugccccucagcuggggagagca NW_006435764.1:6300037..6300129:+
PAL_7871_16483 2.2 86 86 0 0 yes blast cugggcugggguggggggugcu ccccuccacccagagugccugcagggu ccccuccacccagagugccugcaggguaggggagccugggcugggguggggggugcu NW_006436888.1:5353238..5353295:+
PAL_14551_33327 2.2 rRNA 1261 1261 0 0 yes blast agcagggucgggccuggu caugccacccugaaug caugccacccugaauguguccauucucgucugaucuuggaagcugagcagggucgggccuggu NW_006443568.1:6097076..6097139:+
PAL_12938_25016 2.2 71 71 0 0 yes blast aucucacuggagccucca gaggccgguccagucuuagaucu gaggccgguccagucuuagaucucagggccacucccugagaucucacuggagccucca NW_006441955.1:5331044..5331102:-
PAL_13467_28136 2.1 95 95 0 0 yes blast ucaggucccuguucgggcgc aauugaggguaccugaaa ucaggucccuguucgggcgcuacuuguuggagccagccgacgaaguaauugaggguaccugaaa NW_006442484.1:41112453..41112517:+
PAL_65592_35355 2.1 375 375 0 0 yes blast ucggauccgucugagcuugg aagcucagagggcucugauu aagcucagagggcucugauucagaaagaucaucggauccgucugagcuugg NW_006494609.1:21955622..21955673:+
PAL_14551_33397 2.1 17 17 0 0 yes blast uaugcguaugcguaugcauaug uauguguaugugaguauguguagg uauguguaugugaguauguguagguguguaugcguaugcguaugcauaug NW_006443568.1:10709298..10709348:+
PAL_877_690 2.1 2393799 2393799 0 0 yes blast aacauucauugcugucgguggg cacugaacaaugaaugcaac aacauucauugcugucgguggguugaacuguguggaugagcucacugaacaaugaaugcaac NW_006429894.1:1373383..1373445:+
PAL_4933_8007 2.1 40 40 0 0 yes blast ucaggucccuguucgggugcca gucccugaaugggggagcgggg ucaggucccuguucgggugccacuugucggaaaccagacgaccgagucaaaccaggucccugaaugggggagcgggg NW_006433950.1:8290914..8290991:-
PAL_8729_17190 2.1 23 23 0 0 yes blast cagggccgggccgggccgggc gcggcaccacagucaggcucugcc cagggccgggccgggccgggccgcggcaccacagucaggcucugcc NW_006437746.1:5298861..5298907:+
PAL_1709_1844 2.1 648 648 0 0 yes blast uggacggagaacugauaagggu ccuuaucacuuuuccagccagc ccuuaucacuuuuccagccagcuucgugaugcucaguguuggacggagaacugauaagggu NW_006430726.1:6199802..6199863:-
PAL_6761_11887 2.1 11 11 0 0 yes blast ggcugggcugggcugggcua ggccagcugggauugaaugg ggccagcugggauugaauggacuggguggaucauggcucgguugggcugggcugggcugggcua NW_006435778.1:1224005..1224069:+
PAL_63014_34887 2.1 23 23 0 0 yes blast aacccguagauccgaacuugug caagcuugugucuauagguaug aacccguagauccgaacuugugguguuaguccacacaagcuugugucuauagguaug NW_006492031.1:1559413..1559470:-
PAL_13473_28944 2.1 163 163 0 0 yes blast caaagugcucauagugcagguag uacuguagugugggcacuuccag caaagugcucauagugcagguaguuuuggcauuacucuacuguagugugggcacuuccag NW_006442490.1:682794..682854:+
PAL_12054_23323 2.1 644 607 37 0 yes blast ccugguuaguacuuggaug gccaugcuacccugaacgagcc gccaugcuacccugaacgagcccaaucccguuugaucucggaagcuaagcgggguugggccugguuaguacuuggaug NW_006441071.1:16831693..16831771:+
PAL_765_394 2.1 129 129 0 0 yes blast uggaagacuagugauuuuguuguu caacaagucacagcuuccuca uggaagacuagugauuuuguuguucugauguacaaugacaacaagucacagcuuccuca NW_006429782.1:2893019..2893078:+
PAL_11628_22333 2.1 11 11 0 0 yes blast uggggcggggguucugggcugc agcccacccugcucacaug uggggcggggguucugggcugcagugacggcgcucacccccgagagugagcccacccugcucacaug NW_006440645.1:5879832..5879899:-
PAL_65594_35769 2.1 23214 23214 0 0 yes blast ucucgcuggggccucca ugggucucagagaaaac ugggucucagagaaaacuccccuucucucucgggggaaaaucucgcuggggccucca NW_006494611.1:227148..227205:+
PAL_13473_28945 2.0 1060 1059 0 1 yes blast ugugcaaauccaugcaaaacuga uuaguuuugcagguuug uuaguuuugcagguuugcauuucagcguauauauguauauauggcugugcaaauccaugcaaaacuga NW_006442490.1:682916..682984:+
PAL_5808_9545 2.0 16 16 0 0 yes blast cucuggggggcuugcccagccu gcuugcucagcccaaacagggag gcuugcucagcccaaacagggagacucuggggggcuugcccagccu NW_006434825.1:11501541..11501587:+
PAL_2902_3592 2.0 488 488 0 0 yes blast ugagaacugaauuccauggguug accugugaaauucaguucuucag ugagaacugaauuccauggguugugucagugucagaccugugaaauucaguucuucag NW_006431919.1:9190019..9190077:+
PAL_2903_4078 2.0 625 625 0 0 yes blast gcaaggggcuucaacuuu gguucgaggccgccuuccca gcaaggggcuucaacuuucugguucgaggccgccuuccca NW_006431920.1:10242085..10242125:+
PAL_13090_25930 2.0 rRNA 12421 12335 0 86 yes blast ccacccugaacgcgcccga ucggaagcuaagcaggguc ccacccugaacgcgcccgaucucaucugaucucggaagcuaagcaggguc NW_006442107.1:3146379..3146429:+
PAL_65592_35359 2.0 36 36 0 0 yes blast aauguugcucggugaaccccu agguuacccgagcaacuuug agguuacccgagcaacuuugcaucuggacgacgaauguugcucggugaaccccu NW_006494609.1:22107742..22107796:+
PAL_7267_13553 2.0 384 384 0 0 yes blast uggcaguguauuguuagcuggu cagcuaacaugcaacugcuauc uggcaguguauuguuagcugguugaauauaugaauggcaucagcuaacaugcaacugcuauc NW_006436284.1:5389915..5389977:-
PAL_12369_23768 2.0 28 28 0 0 yes blast cccgcugcugcugcugcug gcagcccagauaguggauc gcagcccagauaguggaucuacugcuguggccacuguguagaggugcuacauggggccaccccgcugcugcugcugcug NW_006441386.1:7169159..7169238:-
PAL_65597_37228 2.0 62 62 0 0 yes blast agugcaaaggcugaucc cucagauccuuaugcgcuca agugcaaaggcugauccaccucccacuucucagauccuuaugcgcuca NW_006494614.1:49454913..49454961:+
PAL_12377_23816 2.0 11 11 0 0 yes blast agccaggcggucaaugcgcug guggacuggcugccugcuucu guggacuggcugccugcuucucauucagcagagccaggcggucaaugcgcug NW_006441394.1:648165..648217:-
PAL_11609_21511 2.0 rRNA/tRNA 6192 6192 0 0 yes blast ggggguguagcucagugguagagc aggucccugguucaaucccugg ggggguguagcucagugguagagcaugugcuucgcauguacaaggucccugguucaaucccugg NW_006440626.1:4930704..4930768:-
PAL_5822_10663 2.0 28207 28207 0 0 yes blast uuuggcaaugguagaacucgcacu ugugcguccgccaccgccaccug ugugcguccgccaccgccaccugccucccuccguuuuuggcaaugguagaacucgcacu NW_006434839.1:9534754..9534813:+
PAL_3207_4773 2.0 315 315 0 0 yes blast gcgggcgggcgggcggc ugcuggugugcgggagccg ugcuggugugcgggagccggguaagcggcgggcgggcgggcggc NW_006432224.1:836526..836570:+
PAL_2903_4143 2.0 16 16 0 0 yes blast gaacuugacuaucuagaggaa ucucagauaaucaaucaucau gaacuugacuaucuagaggaauuuucuugggauuucaucaauuauuucucagauaaucaaucaucau NW_006431920.1:1401452..1401519:-
PAL_2371_2660 2.0 11 10 0 1 yes blast uguguauguauguguauauaug uauauacauacacauacaug uguguauguauguguauauauguguauuuauguauguguauauauauguguauauauacauacacauacaug NW_006431388.1:171591..171663:+
PAL_7795_16050 2.0 40 40 0 0 yes blast gguuccauaguguagcgguuagu uggguuugcgccccaguggagccau gguuccauaguguagcgguuaguaugucugcuuuacacgcagaaaguccuggguuugcgccccaguggagccau NW_006436812.1:3274281..3274355:+
PAL_65592_35361 2.0 12 12 0 0 yes blast aauauaacacagauggccugu agguugucugugaugaguucg agguugucugugaugaguucgcuuuauuaaugacgaauauaacacagauggccugu NW_006494609.1:22108341..22108397:+
PAL_63014_34885 2.0 4255253 4255250 0 3 yes blast ugagguaguagguuguauaguu uacagccuccuagcuuuccu ugagguaguagguuguauaguuuagaauugcaucaagggagauaacuguacagccuccuagcuuuccu NW_006492031.1:1553647..1553715:-
PAL_12938_24918 2.0 13 13 0 0 yes blast uagaucugggguggggccu gcccugcaggugauucugag uagaucugggguggggccugagaaauugugucuaaaaggcccugcaggugauucugag NW_006441955.1:33585487..33585545:+
PAL_5812_10074 1.9 11 11 0 0 yes blast cuggagggcgggcgggcg cccggccgccuucccccu cccggccgccuucccccugcacggagacgcucagggucuggagggcgggcgggcg NW_006434829.1:4046749..4046804:-
PAL_12044_22598 1.9 2412031 2412003 0 28 yes blast aacauucauugcugucgguggg cucacugaucaaugaaugcaaa aacauucauugcugucgguggguuugagucugaaucaacucacugaucaaugaaugcaaa NW_006441061.1:1518205..1518265:+
PAL_3435_5439 1.9 6929 6929 0 0 yes blast aucucggugggaccucca ugggucucagagaaaa ugggucucagagaaaacuccccuucucucucuggggaagaucucggugggaccucca NW_006432452.1:451638..451695:+
PAL_65595_36445 1.9 14 14 0 0 yes blast acucucugucccucucccu gacacagggggacaccagcagc acucucugucccucucccuccaucuuuagcuccgcuaugccagagaccggaggacacagggggacaccagcagc NW_006494612.1:7537392..7537466:-
PAL_5822_10855 1.9 68 68 0 0 yes blast uuauggcccuucgguaauucacug gugaauucuaccagugccauacac uuauggcccuucgguaauucacugaccgagacuguucacagugaauucuaccagugccauacac NW_006434839.1:9530384..9530448:-
PAL_5815_10136 1.9 10 7 2 1 yes blast cugcugcuccagcuccugcu gugggaugggguggggg cugcugcuccagcuccugcugccucuuggcugccagcaucuccugcugcugcugcagaggcacggggugggaugggguggggg NW_006434832.1:461784..461867:+
PAL_1026_902 1.9 79 79 0 0 yes blast ucugucucagucguugcccuga aggggggagaccgagacacagc aggggggagaccgagacacagcgaaaaguucggagucucugucucagucguugcccuga NW_006430043.1:778960..779019:-
PAL_14113_31392 1.9 78 78 0 0 yes blast cgggggggcgggcuggg cagcucgucccccuuuc cgggggggcgggcugggcccacucaaccccacggccgaggcagcucgucccccuuuc NW_006443130.1:1641341..1641398:+
PAL_7871_16618 1.9 100 100 0 0 yes blast cugugaggacugugagga gucagguacuccagug gucagguacuccagugucucuggagggagagacugugaggacugugagga NW_006436888.1:4799884..4799934:-
PAL_7871_16432 1.9 78 78 0 0 yes blast cagggcugggcugggcuggg uaccagucgggaagaacc cagggcugggcugggcugggcaggacugggcaaccgauccgucuaccagucgggaagaacc NW_006436888.1:1406989..1407050:+
PAL_7793_15649 1.9 275 275 0 0 yes blast gcgggcgggcgggcggc cgagcagcgcgcagagcgc gcgggcgggcgggcggccuccuuaccugcagcgggccgagcagcgcgcagagcgc NW_006436810.1:9090728..9090783:-
PAL_13474_29353 1.8 61 61 0 0 yes blast uguguauguguguguauaua uguaugcauguaugcaugca uguaugcauguaugcaugcauguguguauguauguuuguguguaugcauguguguauguguguguauaua NW_006442491.1:35880609..35880679:+
PAL_2939_4485 1.8 13 13 0 0 yes blast uccccucccccucccccucc aggggagagcugggacu aggggagagcugggacucaagacuaacagguucuucuuuccccucccccucccccucc NW_006431956.1:781678..781736:+
PAL_12044_22818 1.8 134 134 0 0 yes blast ucaguggucuggggugc gcucuggacccugacc gcucuggacccugacccagagauucauauucaguggucuggggugc NW_006441061.1:3197637..3197683:-
PAL_11628_22276 1.8 22339 22339 0 0 yes blast ucccuguucgggcgcca guaccugaaaggggga ucccuguucgggcgccacuugucggagccagccgaugaagugauugaggguaccugaaaggggga NW_006440645.1:11288757..11288822:+
PAL_7282_15108 1.8 51 51 0 0 yes blast aauccuuggaaccuaggugugagu acacaccuauucaaggauuca aauccuuggaaccuaggugugagugcuguuuuagugcaacacaccuauucaaggauuca NW_006436299.1:316356..316415:+
PAL_7265_12750 1.8 17 17 0 0 yes blast uccugggccccacccccggaga uuugaugaggggucuggagc uccugggccccacccccggagauccugacccaguagcuuugaugaggggucuggagc NW_006436282.1:18489269..18489326:+
PAL_1445_1334 1.8 25 20 0 5 yes blast acacacacacacacacacaca uguguguauauguguauguaug acacacacacacacacacacaaacacauaguguguguguguauauguguauguaug NW_006430462.1:543804..543860:-
PAL_4933_8003 1.8 31 31 0 0 yes blast cugcacuccagccugggca cccguugauaacaagugaccagag cugcacuccagccugggcaaaaaucagggcagagccuggguggcucauguucauauccuagcccguugauaacaagugaccagag NW_006433950.1:7930556..7930641:-
PAL_6742_11136 1.8 337 337 0 0 yes blast uguccucuggcuguccugggc ccaggcagcugccacaguagacaua uguccucuggcuguccugggccagccccugccugcuuagccaucuggagccaggcagcugccacaguagacaua NW_006435759.1:788851..788925:+
PAL_2902_3886 1.7 51560 51560 0 0 yes blast agcagcauuguacagggcu cuucuuuacagugcugccuug cuucuuuacagugcugccuuguugcauauggaucaagcagcauuguacagggcu NW_006431919.1:14797438..14797492:-
PAL_12044_22832 1.7 58 58 0 0 yes blast acaguagucugcacauugguu ccaguguuuagacuaucuguuc ccaguguuuagacuaucuguucaggacucccaaauuguacaguagucugcacauugguu NW_006441061.1:4121731..4121790:-
PAL_11629_22375 1.7 14 14 0 0 yes blast gagaaaaugaugcgggugcu caaaauacccucaucaucuuau caaaauacccucaucaucuuauggggcucauuacaccaagagaaaaugaugcgggugcu NW_006440646.1:577289..577348:+
PAL_3928_6136 1.7 157 56 0 101 yes blast uagcaccauuugaaaucaguguu cugguuucacaugguggcuuagau cugguuucacaugguggcuuagauuuuuccaucuuuguaucuagcaccauuugaaaucaguguu NW_006432945.1:127220..127284:-
PAL_13491_30076 1.7 31 31 0 0 yes blast uggcaggggagauacca guucacccacugcucuucagg uggcaggggagauaccaugaccaugaagaugauuuucccaaggugagguucacccacugcucuucagg NW_006442508.1:2990258..2990326:+
PAL_6764_12001 1.7 14 14 0 0 yes blast guucguucguccguccguccguc cgcacgcacgcucguucguacgu cgcacgcacgcucguucguacguucguucguucguucguccguccguccguc NW_006435781.1:883242..883294:+
PAL_10740_20814 1.7 145 145 0 0 yes blast ugugugugugugugugugugu agagacaggcagacaaacaga ugugugugugugugugugugugcgagagagagagagagacaggcagacaaacaga NW_006439757.1:2153220..2153275:-
PAL_13473_28932 1.7 12 12 0 0 yes blast uuuugcgauguguuccuaauau auugggaacauuuugcauucau uuuugcgauguguuccuaauauguaauauaaauguauugggaacauuuugcauucau NW_006442490.1:440067..440124:+
PAL_2898_3040 1.7 82 82 0 0 yes blast aucugggguagggccugggaau uccagggccccauucuuagagau uccagggccccauucuuagagauggagauucuguaaaucugggguagggccugggaau NW_006431915.1:4788818..4788876:-
PAL_7793_15456 1.7 16 16 0 0 yes blast caggaugucuacaaaauuggug ucccugugggcauagugga caggaugucuacaaaauuggugguaucaguacuaucccugugggcauagugga NW_006436810.1:1120812..1120865:+
PAL_13467_28690 1.7 15 15 0 0 yes blast uucuggaggcucugagagaga ucucucagaguuuuggagg ucucucagaguuuuggaggcuagaagucugaaaugcagguguggcaggacugguuccuucuggaggcucugagagaga NW_006442484.1:47034266..47034344:-
PAL_65593_35732 1.7 rRNA 673 673 0 0 yes blast ccugguuaguacuuggaug ugccacacugaacaugcc ugccacacugaacaugccugaucucaucugaucgcagaagcuaagcagggucaggccaggccugguuaguacuuggaug NW_006494610.1:3027427..3027506:-
PAL_2902_3814 1.6 10 10 0 0 yes blast uguguguauauguauauguaug uauauauacauggaauacgcaug uauauauacauggaauacgcaugaauguauguauauauguauguauacauguguguauauguauauguaug NW_006431919.1:6148747..6148818:-
PAL_13190_27771 1.6 5498 5491 0 7 yes blast ugagaacugaauuccauaggcugu ugcccuagggacucaguuc ugagaacugaauuccauaggcugugaccucuagcaaaugcccuagggacucaguuc NW_006442207.1:12687938..12687994:-
PAL_65594_35971 1.6 40027 40024 0 3 yes blast agcagcauuguacagggcu agcuucuuuacaguguugccuug agcuucuuuacaguguugccuuguggcauggaguucaagcagcauuguacagggcu NW_006494611.1:16684542..16684598:+
PAL_4007_6642 1.6 54 54 0 0 yes blast ucccuguccucaaggagcucau cuguucuuaaggcuagggaca cuguucuuaaggcuagggacaaaagagggaacaaaaccaacucccuguccucaaggagcucau NW_006433024.1:19025184..19025247:-
PAL_14553_33869 1.6 94 94 0 0 yes blast agugguucucaaccuuggcugc uuccugagacuccuaaacuga uuccugagacuccuaaacugacucucauugcccaaccacugggcuggaucagugguucucaaccuuggcugc NW_006443570.1:16596481..16596553:+
PAL_13190_27735 1.5 10 10 0 0 yes blast uguguguauauguauauguaug uauauauacauauauacauauu uguguguauauguauauguauguguguauguauguauauauacauauauacauauu NW_006442207.1:9573966..9574022:-
PAL_1544_1603 1.5 1596 1596 0 0 yes blast cagccuggccccacccucaa gggggagcucuccaguccugcc gggggagcucuccaguccugccucuauuuucaaggccucuugccuaugcaggcagccuggccccacccucaa NW_006430561.1:10051..10123:+
PAL_7794_15977 1.5 rRNA 504 501 0 3 yes blast aaaaaaaaaaaaaaaaaaaaaaaa uuuuuuuuuuuuuuuuuuu aaaaaaaaaaaaaaaaaaaaaaaagggccucagaacauggggccggacuuuuuuuuuuuuuuuuuuuuu NW_006436811.1:16982076..16982145:-
PAL_1223_1106 1.5 23 23 0 0 yes blast ggggugugcucagagcagg uguuuacaacacacuaaacag ggggugugcucagagcagggugcugaauaauggcuccuuuguuuacaacacacuaaacag NW_006430240.1:6313..6373:+
PAL_12044_22915 1.5 7 6 0 1 no blast gccucggucuccuccucug cuguggagggaggggugcc gccucggucuccuccucuguaaagggagcacugcccccucgcagcuguggagggaggggugcc NW_006441061.1:9069967..9070030:-
PAL_13473_28940 1.5 334 334 0 0 yes blast aaaagugcuuacagugcagguag acugcaaugcaagcacuucuuac aaaagugcuuacagugcagguagcuuuuugagaucuacugcaaugcaagcacuucuuac NW_006442490.1:682420..682479:+
PAL_13473_28934 1.5 12 12 0 0 yes blast uuuugcgauguguuccuaauau auugggagcauuuugcaugcau uuuugcgauguguuccuaauaugcuauauaaauauauugggagcauuuugcaugcau NW_006442490.1:440199..440256:+
PAL_8719_16739 1.5 11 11 0 0 yes blast acgaggaagcugaggcuca aguccauauuauuccuguuu aguccauauuauuccuguuuacagacgaggaagcugaggcuca NW_006437736.1:33639..33682:+
PAL_1718_2107 1.5 7580 7580 0 0 yes blast acuggacuuggagucagaagaca cuuuuuggcuguguguucuugu acuggacuuggagucagaagacaugaaacuugguuucaucacuuuuuggcuguguguucuugu NW_006430735.1:10840216..10840279:-
PAL_12938_24948 1.5 27 27 0 0 yes blast agacugaagauccuugaggaa cuuugaggagggguggucaugg agacugaagauccuugaggaaucuuugaggagggguggucaugg NW_006441955.1:36489216..36489260:+
PAL_13474_29518 1.4 51565 51560 1 4 yes blast agcagcauuguacagggcu agcuucuuuacagugcugccuug agcuucuuuacagugcugccuuguagcauucaggucaagcagcauuguacagggcu NW_006442491.1:15894112..15894168:-
PAL_14128_32573 1.4 18 18 0 0 yes blast ucagcugcuagagacugggca ccacugucauagcuucuguuu ccacugucauagcuucuguuucacucagcugcuagagacugggca NW_006443145.1:305568..305613:+
PAL_13474_29663 1.4 18 16 1 1 yes blast augggccgggcagggacca ucugugucucugucucu augggccgggcagggaccacaucagcgccgccucucugagcuaccaguuucugucugugucucugucucu NW_006442491.1:31037845..31037915:-
PAL_14121_32367 1.4 rRNA 515 515 0 0 yes blast gcagggucgggccuggu caagcccgaucccaucu caagcccgaucccaucugaucucagaagcuaggcagggucgggccuggu NW_006443138.1:31835967..31836016:+
PAL_10696_20436 1.3 9 9 0 0 yes blast cagggcagggcagggcaggg cugcaccaucgugccccgua cugcaccaucgugccccguacaggguggaccccaggcgcugguguccccagggcagggcagggcagggcaggg NW_006439713.1:1377782..1377855:-
PAL_946_799 1.3 14 13 0 1 yes blast cugggcugggcugggcuggg ucuuggacuccccugcc cugggcugggcugggcugggugaccggugucuuggacuccccugcc NW_006429963.1:2139970..2140016:-
PAL_14208_32949 1.3 9 8 1 0 yes blast gcgggcgggggcgcgggg ggcagcucccgucagcgg gcgggcgggggcgcggggccgagcgcggacuugcguuucagggggagucuggggcgcgggugcagcacggcagcucccgucagcgg NW_006443225.1:22125603..22125689:-
PAL_7272_14007 1.3 21 21 0 0 yes blast cacuagauugugaguuccuuga uuucuccucauaguuuagcaga cacuagauugugaguuccuugagaaaaggaauguuaccuuacucaucuuuucuccucauaguuuagcaga NW_006436289.1:1192923..1192993:-
PAL_10175_19711 1.2 225 225 0 0 yes blast uccccaguggucuagugguuaggau ccuuguuuacuagauacuuauaaug uccccaguggucuagugguuaggauuuggcgcucucugccaccauccuuguuuacuagauacuuauaaug NW_006439192.1:4723649..4723719:-
PAL_13467_28468 1.2 rRNA 68374 68374 0 0 yes blast accgggugcuguaggcuu gcuaagcaggaucgggucu gcuaagcaggaucgggucugcuuaguacuugaauggaagaucaucuaggaagaccgggugcuguaggcuu NW_006442484.1:9438537..9438607:-
PAL_3207_4775 1.2 15 15 0 0 yes blast ugagugugugugugcgagugu gugugcacacacauauguggg gugugcacacacauauguggguguaugagguguguguuuugagugugugugugcgagugu NW_006432224.1:907520..907580:+
PAL_7796_16309 1.2 795 795 0 0 yes blast ccugguuaguacuuggaug uccaugaucuacggccauucc uccaugaucuacggccauuccacccugaacaagcccgaugucugaucucagaagcuaagcagggucaggccugguuaguacuuggaug NW_006436813.1:436918..437006:-
PAL_2031_2258 1.2 rRNA 450 450 0 0 yes blast cgucugaucucggaagcu caucugaucucggacgau caucugaucucggacgaucccgucugaucucggaagcu NW_006431048.1:1107445..1107483:-
PAL_1026_882 1.2 6542 6507 0 35 yes blast ucagugcaucacagaacuuugucu gaaguucuguuauacacucaggcu gaaguucuguuauacacucaggcuguggcucucugaaagucagugcaucacagaacuuugucu NW_006430043.1:517262..517325:-
PAL_14105_30849 1.1 1131173 1131173 0 0 yes blast aucccggacgagccccca ggggccagagcccaaagacaa ggggccagagcccaaagacaaaggaggcaaaaaaccaacaucuccagaucccggacgagccccca NW_006443122.1:257169..257234:+
PAL_13474_29466 1.1 67 67 0 0 yes blast aucacauugccaggguuuaa aaucugguguggcuuaauug aaucugguguggcuuaauugauaaucauacuugaggauuaucaaucacauugccaggguuuaa NW_006442491.1:5460064..5460127:-
PAL_5103_8166 1.1 4452 4443 1 8 yes blast uagcagcacauaaugguuug caggccauauugugcugcc uagcagcacauaaugguuuguggguuuugaaaaggugcaggccauauugugcugcc NW_006434120.1:3176730..3176786:+
PAL_7793_15696 1.1 12 12 0 0 no blast cugggcggggaggcgggc ucaaccgcccuggacccagcu ucaaccgcccuggacccagcucagggcugggcggggaggcgggc NW_006436810.1:16530804..16530848:-
PAL_14553_34172 1.1 226 211 0 15 yes blast cagugcaauaguauugucaaagc gcucugacuuuauugcacuacu gcucugacuuuauugcacuacuguacuuuacagcuagcagugcaauaguauugucaaagc NW_006443570.1:11796143..11796203:-
PAL_7265_12882 1.1 480 480 0 0 yes blast uguguaugugugugucuauaug uauguacauauguauaugua uguguaugugugugucuauaugucuuugugucugugcguauguacauauguauaugua NW_006436282.1:28337045..28337103:+
PAL_4007_6413 1.1 10 10 0 0 yes blast gccagggcugcagucaucug ggugauuguggcucagggccu ggugauuguggcucagggccuuuaaagccuugcagucauuguuggccagggcugcagucaucug NW_006433024.1:10140641..10140705:+
PAL_3217_5028 1.1 126 126 0 0 yes blast cuuccucugauuccaucu augggaacagaaagau cuuccucugauuccaucuccaucucccacuugggauguuuauguaugggaacagaaagau NW_006432234.1:98008..98068:+
PAL_9056_17593 1.0 9 9 0 0 yes blast gguggcggcgguggcggugg augguggcaguggccguggcggc augguggcaguggccguggcggcggcagugguggugauaguggcgggguggcggcgguggcggugg NW_006438073.1:7268085..7268151:+
PAL_13086_25698 1.0 9 9 0 0 yes blast uuugaggaccccugcucua gugcggccugguucuuaauag gugcggccugguucuuaauaggccacagacugguaccaguccauggccugggguuugaggaccccugcucua NW_006442103.1:13424014..13424086:-
PAL_1721_2118 1.0 16 16 0 0 yes blast uagaguggccuuguguaguagg uauguauuagguaguucugcu uauguauuagguaguucugcuaugucuccuggucuuaguagaguggccuuguguaguagg NW_006430738.1:159690..159750:-
PAL_7793_15596 1.0 11 11 0 0 yes blast ugagugugugugcgugagugu agucugcacggguguaug ugagugugugugcgugagugugcaugugugcaugcugugugugcaggugcaugagucugcacggguguaug NW_006436810.1:18658289..18658360:+
PAL_11118_21114 1.0 8 8 0 0 yes blast gcggagggcggagggcggg cgcucccuuguccucaggcgg gcggagggcggagggcggggagcgguucucggccgcuccgcgcucccuuguccucaggcgg NW_006440135.1:4335569..4335630:+
PAL_13491_30186 0.9 310 310 0 0 yes blast cacuagauuaugagcuccuuga aagggacucuaacacagagcc aagggacucuaacacagagccaagugugacuuuuacugcacuagauuaugagcuccuuga NW_006442508.1:1983030..1983090:-
PAL_65598_37958 0.9 rRNA/tRNA 113 88 0 25 yes blast aagggcuuagcuuaauuaaagug uaggguauuuagcuguuaacu uaggguauuuagcuguuaacuaaauuuucgugggguuggagcccaccaaucuaguaagggcuuagcuuaauuaaagug NC_023122.1:5079..5157:-
PAL_12938_24715 0.9 9 9 0 0 yes blast ccuaagccacagcccagcaugcc cagcagggggguggcuacaacu cagcagggggguggcuacaacuggcagcagacacagccuaagccacagcccagcaugcc NW_006441955.1:15122360..15122419:+
PAL_14121_32517 0.9 10 10 0 0 yes blast gggggagggggagagggga accucugcacuuccuaaucca gggggagggggagaggggacuauaggaccucugcacuuccuaaucca NW_006443138.1:25570163..25570210:-
PAL_7274_14133 0.9 14 14 0 0 no blast cacccaggcuggccaggca ccaagccacagcccggggaca ccaagccacagcccggggacagcacccaggcuggccaggca NW_006436291.1:228937..228978:-
PAL_14102_30782 0.9 9 6 3 0 yes blast auggaccuggcugcaggg cugcugccggcucucugucu auggaccuggcugcagggaggaggagggaacucucugucccucccuccuccuccaucuccccacccuuccucccuccuccuccugcugccggcucucugucu NW_006443119.1:2501966..2502068:-
PAL_13467_28006 0.8 rRNA 194 193 0 1 yes blast ugugugugugugugugugugu uauauauauauauauauauau uguguguguguguguguguguguaugaauauauauauuauauauauauauauauauauauauauau NW_006442484.1:26567048..26567114:+
PAL_3928_5969 0.8 10 10 0 0 yes blast agggcaaggagcuggaguuc gcaagcuucuugcaugu gcaagcuucuugcauguaucgcuucaagaccaggccaguguggccgagcagauggcuaugugcuacagggcaaggagcuggaguuc NW_006432945.1:10648138..10648224:+
PAL_7871_16540 0.8 14641 14641 0 0 yes blast caaguccuucugcucgaggcc ccccagcggggggcaccagcc caaguccuucugcucgaggcccaaaugaaaacaaaaccaaaauccagcaagucggccccagcggggggcaccagcc NW_006436888.1:8953809..8953885:+
PAL_3928_6054 0.8 9 9 0 0 yes blast gaggggcaggggcaggggca gugcugucagagaaggccgcucuc gaggggcaggggcaggggcagugacgcggaggcuggguggcuugcguuucauguggugcugucagagaaggccgcucuc NW_006432945.1:15579214..15579293:+
PAL_14245_32974 0.7 16 16 0 0 yes blast uguagagcugcuaugucucc aguagaguggcuuuaugua uguagagcugcuaugucucccggucuuaguagaguggcuuuaugua NW_006443262.1:817000..817046:+
PAL_13473_28936 0.7 40 40 0 0 yes blast uuuugcaauauguuccugaau uugggaacauuuugcauccau uuuugcaauauguuccugaauauguaauauaaguauauugggaacauuuugcauccau NW_006442490.1:440368..440426:+
PAL_13467_28512 0.7 126 126 0 0 yes blast ugugugugugugugugugugu auacauauguauaugcagaug auacauauguauaugcagauguauauauacgugugugugugugugugugugu NW_006442484.1:19534056..19534108:-
PAL_5822_10794 0.6 436 436 0 0 yes blast ggagcucacagucuagu uaggcauggucuag uaggcauggucuaggugcagauuauaaggagauagaagacucagucuuguccucaaggagcucacagucuagu NW_006434839.1:2360814..2360887:-
PAL_8719_16969 0.6 10 10 0 0 yes blast augaguuugaacugugcagguc ccgugcgugcaguucaaaccugcau augaguuugaacugugcaggucuacuuacauguagauauuuuucaauugauccgugcgugcaguucaaaccugcau NW_006437736.1:8848808..8848884:-
PAL_12938_24695 0.6 2020 2020 0 0 yes blast ugagugugugugugugaguga acuuuaauacuggcauucuuu acuuuaauacuggcauucuuuauacuguacaacuuugauguugcgugugugagugugugugugugaguga NW_006441955.1:13009999..13010069:+
PAL_65596_36615 0.6 163 163 0 0 yes blast guaguguagugguuaucacguuc ggugauauccacacauacuauuu ggugauauccacacauacuauuuuuguaguguagugguuaucacguuc NW_006494613.1:11208018..11208066:+
PAL_3432_5294 0.5 rRNA 2342 1089 0 1253 yes blast auaccgggugcuguagg aguacuuggaugggagacc aguacuuggaugggagaccaccuagaaauaccgggugcuguagg NW_006432449.1:78882..78926:-
PAL_61526_34807 0.5 331 331 0 0 yes blast uaaugaaaacauuugcaca ugcuguuuucuagg uaaugaaaacauuugcacaaugcuguuuucuagg NW_006490543.1:371..405:+
PAL_1448_1584 0.5 10 10 0 0 yes blast gucugucugucuguccccag guucacagacauauggaauu gucugucugucuguccccagagcccccuguccccagguucacagacauauggaauu NW_006430465.1:55328..55384:+
PAL_13491_30179 0.5 rRNA 500 497 0 3 yes blast ccugguuaguacuuggaug gaagcuaagcagggucg gaagcuaagcagggucgugccugguuaguacuuggaug NW_006442508.1:1108922..1108960:-
PAL_3217_5032 0.5 85 85 0 0 yes blast agauggaaucagaggaag cccaucuuucuguuccc cccaucuuucuguucccauacauaaacaucccaagugggagauggagauggaaucagaggaag NW_006432234.1:98008..98071:-
PAL_7266_13310 0.5 40 40 0 0 yes blast ucuggcuguuguggugugcaa gccacacugcaacaccuuaca ucuggcuguuguggugugcaaaacuccguacauuacuauuuugccacacugcaacaccuuaca NW_006436283.1:11971201..11971264:+
PAL_14107_31150 0.5 rRNA 68316 68314 2 0 yes blast accgggugcuguaggcuu gcuaagcagagucggacc gcuaagcagagucggaccuggguaguacuuagaugggagaccaccuaggaagaccgggugcuguaggcuu NW_006443124.1:5043878..5043948:-
PAL_7871_16516 0.5 8 8 0 0 yes blast cggggggcggggugggggg cuggaccccuugccggc cggggggcggggugggggggagcaagggagggagcaggguuucuagaagguuugcaucucagugcugcccuggaccccuugccggc NW_006436888.1:8098581..8098667:+
PAL_6820_12304 0.4 rRNA 673 673 0 0 yes blast ccugguuaguacuuggaug ccuaggaagaccaggug ccugguuaguacuuggaugggugaccaccuaggaagaccaggug NW_006435837.1:5721462..5721506:-
PAL_56910_34724 0.4 7 7 0 0 yes blast ccggcccugcccugcccugcc cuugcugggcaggcggca ccggcccugcccugcccugcccugugacugugacagggcuugcugggcaggcggca NW_006485927.1:97..153:+
PAL_13100_27362 0.4 5 3 0 2 no blast gccagggcggggcgggc uccgcugggcccggagc uccgcugggcccggagcgcuggccagggcggggcgggc NW_006442117.1:2262144..2262182:+
PAL_11621_21641 0.3 116 116 0 0 yes blast aauugggagagcauuagacuga aguuugauguagucccauuugu aguuugauguagucccauuuguaaacucaccgaaauagcucaauugggagagcauuagacuga NW_006440638.1:10915013..10915076:+
PAL_12044_22668 0.3 24 24 0 0 yes blast gcgggcggcgggcggcggggg gacgcuccuugucccaccg gcgggcggcgggcggcgggggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngagggggacgcuccuugucccaccg NW_006441061.1:5146453..5146532:+
PAL_65592_35358 0.2 7 7 0 0 yes blast ucuuggaguaggucauugggu uggauggccccuccaugucu ucuuggaguaggucauuggguggauccguuauuucccucugugggccacuggauggccccuccaugucu NW_006494609.1:21957108..21957177:+
PAL_13190_27736 0.2 10 10 0 0 yes blast uguguguauauguauauguaug uauguauguauguauauacaug uauguauguauguauauacauguuguguguauauguauauguaug NW_006442207.1:9574000..9574045:-
PAL_12938_25216 0.1 3691 3691 0 0 yes blast uguguauguguguguauauaug uauaacaaagcacguguaugua uauaacaaagcacguguauguauuuaaaguguguguguauguguguguauauaug NW_006441955.1:29812710..29812765:-
PAL_7271_13826 0.1 9 9 0 0 yes blast auauauguauguguguaugugua ucuauauccacauacauauaugu auauauguauguguguauguguauuuauauacguguauaucuauauccacauacauauaugu NW_006436288.1:11213662..11213724:+
PAL_14553_34200 0.1 7 7 0 0 yes blast cagggcagggcagggcaggg cugcuuccucccucucugca cugcuuccucccucucugcacuccuggccaggcagggcagggcagggcagggcaggg NW_006443570.1:14276147..14276204:-
PAL_14553_34199 0.1 7 7 0 0 yes blast cagggcagggcagggcaggg cucccucucugcacuccuggc cucccucucugcacuccuggccaggcagggcagggcagggcagggcaggg NW_006443570.1:14276147..14276197:-
PAL_14121_32132 0 rRNA 1006 1006 0 0 yes blast ccugguuaguacuuggaug accaggugcuguaggcg ccugguuaguacuuggaugggagaucgccuaggaagaccaggugcuguaggcg NW_006443138.1:6512696..6512749:+
PAL_3210_4893 0 4758 4758 0 0 yes blast ugagugugugugugugagugu ccugaaaucacauguuaua ccugaaaucacauguuauacaggcaaugcaggugacugaaaaaauuacguuguguuguguguaugagugugugugugugagugu NW_006432227.1:6971081..6971165:+
PAL_9056_17671 0 7 7 0 0 yes blast ugcccccugugucccug uggccaccagggggcagc ugcccccugugucccugcuucagcggcccuuucucgagugcuggaacuuggccaccagggggcagc NW_006438073.1:4781063..4781129:-
PAL_2894_2908 0 rRNA 68492 68374 12 106 yes blast accgggugcuguaggcuu ucgggccugguuaguac ucgggccugguuaguacguggaugggagaccgccuaggaagaccgggugcuguaggcuu NW_006431911.1:1046752..1046811:-
PAL_4932_7717 0 754 750 3 1 yes blast ucugagccuuggcuucccagc cccgccuggcuccagccc cccgccuggcuccagcccauuccccacucuggccaccugcccuggcagcuuccucaaaucucugagccuuggcuucccagc NW_006433949.1:8395776..8395857:+
PAL_65595_36282 0 10 10 0 0 yes blast uauauauauauauguacguau acguacauauauauauauaca uauauauauauauguacguauauaaacauauauacguacauauauauauauaca NW_006494612.1:8925462..8925516:+
PAL_12054_23411 0 rRNA 7 3 4 0 yes blast cugcugcugcugcugcug acugcugcugcugcugcu acugcugcugcugcugcugcugcugcugcuacugcugcugcugcugcugcuacugcugcuacugcugcugcugcugcugcagcugcugcugcugcugcugcugcug NW_006441071.1:715960..716066:-
PAL_14111_31343 0 9 9 0 0 yes blast cuggccucagacuccaaugac gcuuggaucuguggucugca cuggccucagacuccaaugacucaugcucugaucacuaaccuggcucccgaagaccaaggaaucagcagcuuggaucuguggucugca NW_006443128.1:1355025..1355113:-
PAL_2902_3778 0 10 10 0 0 yes blast gacuagcugugugaccuugggc ccgaguuuaaauagugguuuc ccgaguuuaaauagugguuucaucauugacuagcugugugaccuugggc NW_006431919.1:956064..956113:-
PAL_7281_14717 0 11 11 0 0 yes blast ccucagugaugaaaacuuugu agcuauuucugagguugagguu agcuauuucugagguugagguuagggagcuaaccucagugaugaaaacuuugu NW_006436298.1:43394632..43394685:+
PAL_65596_36785 0 21 21 0 0 yes blast aucaauguagaacucagucuccu gaggcccugaguugacaaauggugg aucaauguagaacucagucuccuuggaaaaaaagaggcccugaguugacaaauggugg NW_006494613.1:15970959..15971017:-
PAL_579_68 0 7 7 0 0 yes blast gaggaggggcugggggccuggacuc guuggggaccccuggguucuaagcga gaggaggggcugggggccuggacuccugagucagaaggaggaagggguuggggaccccuggguucuaagcga NW_006429596.1:147389..147461:+