FastQCFastQC Report
Wed 27 Nov 2013
HUH7-EBOV-3h_R1_clipped.fastq

Summary

[OK] Basic Statistics

Measure Value
Filename HUH7-EBOV-3h_R1_clipped.fastq
File type Conventional base calls
Encoding Sanger / Illumina 1.9
Total Sequences 17203785
Filtered Sequences 0
Sequence length 20-100
%GC 48

[OK] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[WARN] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[WARN] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[OK] Overrepresented sequences

No overrepresented sequences

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
AAAAAAA 1739900 13.80701 16.338118 90-94
TTTTTTT 1610325 12.778633 15.811036 90-94
GCTGCTG 558065 6.403042 10.354344 5
CAGCAGC 542900 6.2534037 9.398505 9
CTGCTGC 474395 5.464311 8.203305 8
TTTTCTT 609045 5.2151 9.990363 2
GCAGCAG 451750 5.1832366 6.890449 8
GGAGGAG 450485 5.128563 10.143443 1
AAGAAGA 558300 5.1184564 8.350733 2
GAAGAAG 517665 5.101151 9.187943 1
GAGGAGG 444595 5.061508 7.9388485 2
AAGAAAA 589570 5.028735 7.300633 5
CTTCTTC 502125 5.0062194 7.146938 5
TCTTCTT 538655 4.976985 9.558951 7
AGAAGAA 526405 4.826045 6.4570923 3
TTTCTTT 560430 4.798822 6.5444 6
TTCTTCT 518800 4.7935314 8.71651 6
CTCCTCC 411000 4.771167 7.685797 1
AAAGAAA 550310 4.693867 6.9675274 4
CCTCCTC 401650 4.662626 5.092276 15-19
AGGAGGA 432550 4.581458 6.9374657 4
TGCTGCT 418665 4.469095 7.6073165 7
TTCTTTT 520045 4.4530144 6.9789133 2
GAAGAAA 477160 4.3745704 9.350033 1
AGCAGCA 405015 4.3234053 5.273494 6
GGAGAAG 407350 4.3145456 11.689159 1
AAAAGAA 505785 4.314091 7.2930408 3
GCTGCAG 373465 4.2850127 7.5949764 5
TTCTTCA 462300 4.2714972 6.9886913 6
TCCTCCT 395465 4.254499 5.394845 7
TTTCTTC 458890 4.239984 7.1348205 5
CTCCAGC 366645 4.2397037 7.5590506 1
TGAAGAA 459515 4.2127957 7.1604424 8
CTGCAGC 363350 4.1852474 6.6923313 6
CTGCTGG 359280 4.1222525 6.3246765 8
CTTCTCC 380800 4.09673 5.8252215 6
TTTTTCT 472925 4.0495386 5.198078 6
AGAAAAA 468540 3.9964104 5.364375 6
AGGAAGA 404010 3.981177 5.766875 2
GCTGGAG 346930 3.9650648 7.9269366 5
CAGCTGC 343795 3.960003 6.5853734 9
GCAGCTG 344495 3.9526205 6.591551 8
CCAGCAG 339525 3.9108245 6.595885 8
CTTCCTC 362940 3.9045885 5.299743 8
GAGGAAG 368615 3.9042747 6.6219506 5
TCTTCCT 385600 3.8444571 7.5643525 7
GAAGATG 379560 3.7402372 10.616901 2
AGCTGCT 348635 3.7215555 6.211978 6
GGAGCTG 323805 3.700769 7.725113 4
CAGCAGG 320035 3.6719804 5.2467327 9
CCTGCTG 317525 3.6574066 4.897336 8
CTTCTTT 392925 3.6304903 8.288271 1
GAAGAGG 342440 3.6270359 6.7848744 2
CATCTTC 363040 3.6195378 6.571852 5
AGCAGCT 338915 3.6178036 4.8960986 6
CCTGGGC 292210 3.6177537 4.9423385 1
AAAAAGA 421870 3.5983386 8.138223 2
GGAAGAG 339555 3.596479 11.265355 1
AAAGAAG 391140 3.5859451 5.8258944 2
TCTTTTT 418350 3.5822258 5.1542716 7
CCGCCGC 266520 3.5744557 5.7586718 2
CCTCTTC 331945 3.5711374 7.17177 3
TGGAGAA 362225 3.5694156 4.3501554 7
CAGCTCC 308595 3.5684416 6.864045 3
TCTTCAT 385670 3.5634618 6.520211 7
TTCTCCA 356235 3.5516915 5.978213 7
CTCCAGG 308275 3.5508657 8.199523 1
CAGCTTC 330560 3.5424001 7.9066086 3
GGAAGAA 358980 3.5374448 8.110516 1
GAAGCTG 331025 3.519827 7.058546 4
GCGGCGG 264850 3.510741 7.5056906 1
CCTGGAG 305890 3.5096796 8.082194 1
CCAGGAG 303620 3.4836395 6.8757477 1
GCCTGGG 280330 3.4571626 5.4796753 1
CTCCTTC 321205 3.455594 7.257878 1
TCCTTCT 346390 3.453531 4.9581017 3
AGGAGAA 350090 3.4498413 4.2998476 4
GAGGCTG 301770 3.448931 5.4494367 5
CAGCCTG 298530 3.438618 5.3583183 9
CAGGAGG 300540 3.4348786 6.2321506 1
TCTTCAG 345370 3.4299638 6.2459917 7
ATTTTTT 431800 3.4265268 5.346152 1
CAGGCTG 298230 3.4217913 5.0225515 9
ATGAAGA 372455 3.4146366 6.9088345 6
AGAAGGA 345825 3.407813 5.775914 4
TTCTCCT 341620 3.4059737 6.205459 7
CTGCAGG 296545 3.4024582 5.279584 1
CTGGAGG 297160 3.396243 9.039795 1
CTGAAGA 341610 3.3794262 5.6981554 1
TCTTCTG 339730 3.3739462 6.139727 7
CTTTTCT 365025 3.3727038 9.749894 1
AAAAAAT 424270 3.3667977 5.549258 1
GAAAAAA 394495 3.3648436 8.083802 1
TTCTTCC 337445 3.3643486 6.335308 6
CCAGCTG 291630 3.3591404 6.0335765 2
CTCCTGG 291615 3.3589625 6.645355 1
TCTCCAG 313215 3.356525 4.7407565 7
CAGCCTC 289950 3.35284 5.433049 9
TTTGTTT 392300 3.3460913 5.9081936 2
CTGGCTG 291480 3.3443391 5.4664173 1
GGAGCAG 292275 3.3404176 6.31089 4
CTCTTCT 334415 3.3341393 7.537938 1
AAACAAA 389320 3.3336794 6.78744 5
TTTTAAA 419995 3.3328586 6.533789 6
CAGCTGG 290365 3.331551 5.631022 9
CCTGCAG 288380 3.321705 4.9937897 8
AGAAGAG 336940 3.3202589 4.9279647 3
GAAGGAG 313340 3.3188164 5.4838037 5
CTGGAGA 312030 3.3178504 8.533963 1
CCTCCTG 286805 3.3164678 3.7719243 10-14
GAGAAGA 336080 3.3117843 6.6928754 2
TTTAAAA 417030 3.3093355 7.556334 7
TCTTTCT 357280 3.3011427 4.349666 7
GCCCAGG 265875 3.291714 4.273341 6
AGAAAGA 358665 3.2882164 5.3396926 2
CCTGGCC 264490 3.2873576 5.7943754 1
CCTCCAG 284200 3.2863498 4.3355484 5
CCACCAC 281840 3.2717998 5.2174997 1
GCCGCCG 244700 3.2690403 4.480654 7
TTTTTTC 381255 3.2645912 4.835846 2
AAAACAA 380975 3.2622228 6.6721034 4
GGCCAGG 264435 3.2611423 4.1878657 6
CTGCTCC 281955 3.260385 4.95437 3
TTTTTAA 410780 3.2597284 6.242162 5
CTGGAAG 305930 3.2529886 12.091019 1
CTTCATC 326175 3.2519908 6.1080627 6
GTGGTGG 284600 3.24003 4.607363 6
TTTCTCT 350655 3.2399304 5.6304874 6
CTCCTGC 280145 3.239455 6.8703866 1
AGAGGAA 328590 3.237977 5.720906 4
CTCTTCC 300915 3.23731 5.129598 6
CATCATC 324685 3.237141 4.9858637 9
GATGATG 328235 3.2344687 6.83038 2
GGTGGTG 283115 3.2231233 4.51204 5
TTAAAAA 405690 3.2193513 7.7852125 7
CAGCCAG 279085 3.2146454 4.2920194 9
GCAGGAG 281260 3.214527 5.546189 1
GAGCTGG 281235 3.2142363 6.6405406 9
AGGAAAA 350385 3.2123055 3.8706088 40-44
TCTTCTC 321665 3.2070215 5.254698 7
CCCAGCC 256680 3.202758 8.708124 1
CAGGAAG 301050 3.201104 9.929096 1
AGAAAAG 348940 3.1990583 6.367541 2
CTGCTTC 298065 3.1941674 5.4389014 3
GGTGGAG 280350 3.19165 8.160873 5
CGGCGGC 239205 3.183192 6.2463207 2
CCCCCCC 235485 3.1829574 6.6392264 90-94
TTTTCCT 344220 3.180473 5.329622 6
CACCACC 273920 3.1798584 5.2004733 9
CTTTTTT 370605 3.1733973 8.665103 1
TCCTGCT 296050 3.1725736 6.3957734 7
AAGGAAA 345375 3.1663742 4.2433977 5
TGGAAGA 320620 3.1594348 6.1702724 2
TTGTTTT 370165 3.1572924 4.511412 9
AAAAAAG 369510 3.1517339 5.451934 2
GATGAAG 319725 3.1506147 8.714052 5
GGCTGGG 256235 3.147711 4.1030955 4
CCAGCTC 272195 3.1475298 7.7355127 2
CTTCCTG 293550 3.145783 4.0926847 8
AGAGAAA 343120 3.1457007 4.708377 4
CAGAAGA 317900 3.1448765 4.975538 1
GGGGGGG 238635 3.1386688 5.760047 90-94
GCCCTGG 253360 3.1367652 3.6077404 55-59
TTTCCTT 339080 3.132982 5.7895274 7
AAAGGAA 341305 3.1290607 5.0409007 5
CCCAGGC 251750 3.1290166 7.349963 1
GCCCAGC 251665 3.1279597 4.706324 6
TTCCTCT 313725 3.1278589 4.2482677 8
CCAGCCT 270470 3.1275828 5.3962474 1
CTTTCTT 338350 3.1262364 6.5558157 1
GAGGCAG 273335 3.123952 6.8849087 5
AAGAGGA 316680 3.1206138 4.666668 3
CTTCTTG 314055 3.1189613 5.174181 5
CGCCGCC 232550 3.118864 5.110522 1
TGGAGGA 294000 3.1139674 4.8038692 7
CTTCTGC 290405 3.11208 4.9750366 6
CAAGAAG 314565 3.111884 7.939687 1
TCTCCTT 311775 3.1084175 5.157303 7
TCTCTTC 311760 3.108268 5.2454224 7
CTGGGCC 251000 3.1075466 5.431964 1
CTTCCAG 289600 3.103458 4.47156 5
GAAGAGA 314590 3.1000185 5.789666 4
CCTTCTT 310560 3.0963035 5.036845 4
TTCCTTT 334860 3.09399 4.7968965 2
GCTGAGG 270605 3.092746 4.1309366 6
GGAGGCC 250285 3.086638 4.446234 3
GAGGTGG 270955 3.0846922 5.5767713 3
CTGCCTC 266110 3.0771613 5.2499757 8
TCCTCTT 308445 3.0752168 7.1797523 2
GGCCCAG 248325 3.0744328 4.4864345 5
TCTTCCA 308240 3.0731776 6.2193823 7
GAAGCAG 287875 3.0610123 5.589467 4
ACAGCAG 286650 3.0598965 3.7592268 20-24
AACAAAA 356905 3.0561154 5.672133 5
CTCTTCA 306520 3.0560288 5.630515 4
TTCTCTT 330690 3.0554607 5.5488334 7
CTCCTCT 283900 3.0542583 10.090952 1
AGAGGAG 288145 3.0519576 4.3950424 4
TTTTGTT 357775 3.051613 4.9120183 7
GAAAGAA 332680 3.0499873 6.334306 1
AAGAAGG 308780 3.042766 4.8042016 2
AAGGAGA 308380 3.0388243 3.8093529 4
GCTGGGC 246225 3.0365634 3.6814802 90-94
GGCTGCT 263790 3.0266335 5.3641186 4
TCCTCCA 281325 3.0265608 3.778399 7
AAGATGA 330065 3.0260088 6.8494554 3
AAGAAAG 330005 3.0254636 5.0153127 5
AAAAACA 353235 3.0246902 6.477064 2
AGCAGGA 283915 3.018905 3.7360327 25-29
GAGGAGA 284745 3.0159454 4.493585 4
TCCAGCT 281390 3.0154765 6.674945 7
CAGAAAA 326775 3.0075572 9.0183 1
AGCTGGA 282820 3.0072572 5.243208 4
AGCCTGG 261980 3.005871 3.5173872 9
CCAGGGC 242620 3.003801 5.241149 2
CTGCTGT 280795 2.997383 8.443122 1
CCACCTC 257880 2.9936504 5.141157 2
CCAGGCT 259695 2.991297 6.4363575 1
GGGGCTG 243410 2.9901628 6.120493 2
CTTCTCT 298975 2.9808004 6.127764 1
GGCGGCG 224125 2.9709072 5.672907 6
CTTCAGC 276340 2.961359 5.672946 6
GGCCTCC 238125 2.9596658 5.0822864 9
TGCTGGA 277605 2.9518013 5.436133 9
TCCAGCA 275420 2.9515042 6.206362 7
CTGGAGC 256855 2.9470685 5.920181 1
TTTTCCA 318450 2.9423718 5.2737637 7
AAGAGAA 320410 2.937497 5.5142846 5
GCTCCAG 254825 2.935202 6.499441 5
GGGGAGG 239655 2.9325798 7.9979773 2
CCCAGGA 254305 2.9292169 7.85119 1
TCAGCAG 274280 2.9278467 5.159269 8
CTCCACC 252145 2.9270744 5.49295 1
CTGGGCA 254730 2.9226868 7.767235 1
CCAGAAG 273580 2.9203787 6.327403 1
CAAAAAA 340390 2.9147 5.4819713 1
TCCAGGA 272920 2.9133291 6.291448 7
CACACAC 270535 2.910488 6.6072006 1
TTCTGCT 292775 2.907624 5.6916056 7
GCAGAAG 273360 2.9066725 5.4716396 1
TCTGCTG 271900 2.9024327 6.1275644 7
AAAAATA 365215 2.8981664 5.9656343 2
ATCTTCA 313320 2.8949769 6.528806 6
TGAAGAT 315320 2.8908236 5.8864083 1
CTGGTGG 252600 2.8869624 6.0726066 1
AGAAGAT 314485 2.8831725 7.2428527 1
CCAGCCC 230845 2.8803983 5.4215 2
CCTGGCT 249345 2.8720763 9.437476 1
GGGCTGG 233775 2.8718019 5.0575414 3
TCCTGGG 250240 2.8711655 5.097118 7
CCCAGCT 247225 2.858789 11.49729 1
CAGAAGG 268240 2.8522305 5.2589083 1
CTCAGCC 245365 2.8372808 5.891217 1
GAGCAGC 247060 2.834688 5.8977237 5
TGGAAAA 307925 2.8230312 5.049429 7
GGAGGTG 247285 2.815221 5.6084323 4
TTCTGGA 284115 2.8106403 5.2783036 7
GGGAGGC 228700 2.8094625 6.6291037 3
GAAAAGA 305190 2.7979612 6.550933 2
ATCTTCT 302760 2.7974014 6.7265086 6
ACACACA 280315 2.7947752 5.4403815 4
GTGGAGG 244635 2.7850523 6.5403466 6
CTGCCTG 241775 2.7848814 5.1920333 8
CACCTCC 239830 2.7841134 5.1572638 9
AAGAAGC 281430 2.7840915 5.08069 2
TTGAAGA 303255 2.780213 6.48663 7
GGCAGAG 243245 2.7800524 5.450473 1
CTTTTTC 300690 2.7782707 5.4209065 1
CCTGGGG 224935 2.7740052 5.462462 1
CTTCCTT 278180 2.773473 7.421971 1
GGGAAGA 261485 2.769581 6.3315635 2
TGCTGGG 242105 2.7670157 5.2580404 7
TAAAAAA 348420 2.7648897 5.562966 8
CTGAGGA 258955 2.7534978 5.7882533 1
GAAAAAG 299790 2.7484543 8.688877 1
CCCCAGC 220230 2.7479484 5.2306795 1
AGAGAGA 278710 2.7464514 5.253331 4
AGAAAAT 321975 2.7462804 6.72657 1
GGAAAAG 278590 2.745269 10.833887 1
GAGAGAG 258040 2.7330933 5.1783266 5
CTTCAGG 255900 2.7316425 5.3887067 1
CTGGGAG 238945 2.7309036 11.087043 1
TGCAGCA 255720 2.7297251 5.064939 7
CTGCTTT 274690 2.7280173 8.284871 1
GGCAGGG 222000 2.7271564 5.4755 1
AAGAAAT 319470 2.724914 6.3535333 1
AGAAGCT 275220 2.722654 5.4396343 3
TTTTCAA 317590 2.7194517 5.5565863 5
TTTATTT 342495 2.7178519 5.319564 2
GCTTCTT 273070 2.7119286 5.211277 4
TGGGAGG 237945 2.70889 5.947508 2
GAGAAAG 274755 2.7074783 5.2083354 1
CTGGGGC 219260 2.7040184 6.4780664 1
AAATAAA 339915 2.6973987 5.2308884 4
TGAAAAA 316220 2.6971931 5.285004 8
GGAGAAA 272985 2.6900363 5.0891304 1
GGAAAAA 292820 2.6845536 7.6608844 1
GAGCTGC 233770 2.6821988 6.538191 5
CATTTTC 290025 2.6797342 5.394358 3
TCCAGCC 231630 2.678456 5.78791 7
GCCAGGC 215790 2.6716275 5.529897 1
AAAAATT 334790 2.6567247 6.3200192 2
AAAGAGA 289605 2.6550791 5.083683 4
AGAAGCA 268180 2.6530137 5.7892804 4
GGGCTGC 214685 2.6475968 5.3125243 3
TCCTTTT 286465 2.646837 6.1121745 2
GGCAGCT 230060 2.6396313 5.2742453 1
GGCTGCA 229980 2.6387136 5.1506295 4
ATTTTCA 307995 2.637292 5.281884 4
CTGGGCT 228375 2.6202946 10.7993765 1
GCTTCTG 245295 2.618434 5.477063 5
GGCGGGG 198145 2.616304 5.4000177 1
CTCCCAG 226050 2.6139317 5.073441 1
TCTGCTT 262450 2.6064587 5.3777146 2
CCCCGCC 193510 2.6054173 6.865713 1
CAAAGAA 282065 2.5960574 5.3099203 1
CCAGAGG 226100 2.5942 5.1240644 2
TTCATTT 302300 2.5885231 6.7595153 7
AAATGAA 303400 2.5878453 6.8721075 5
GAAAATG 282145 2.5866823 7.3015494 2
CAGCTTT 259820 2.5803435 6.7175217 3
GAAGCCA 241710 2.580177 6.2220964 4
TTTCTTG 279580 2.5731673 5.7883916 5
TTCAGCA 258930 2.5715082 5.825597 7
GTGCTGG 224855 2.5698655 5.316513 6
TTCATCA 277910 2.5677996 6.429961 7
TTCTTGG 259310 2.5652502 5.1034174 6
GAGAAGC 240085 2.5528548 6.2128553 2
TTCATCT 276190 2.5519035 5.841112 7
CTCTGCT 237630 2.5465248 8.346479 1
CTGGAAA 257345 2.545823 7.9903064 1
CAGCTCT 237420 2.5442781 5.3491745 3
GGAGATG 239040 2.531846 8.125085 2
GGGAGGA 222280 2.5305548 5.3921795 1
AAAAATG 296625 2.5300581 5.106717 2
AGATGAA 275635 2.526999 6.7640166 4
GGCTGGA 220945 2.5251815 5.1677976 4
TTTCAAA 294865 2.5248663 5.9947457 6
CCTCCTT 234495 2.5227487 5.711199 1
CCATCTC 234110 2.5186107 5.995679 2
CCAGAGC 218000 2.511037 5.020844 2
GAAGAGC 236045 2.509897 5.8913302 2
GGGAGGG 204695 2.5047858 5.7616262 1
AAAATGA 293210 2.5009296 6.1144323 4
CAGAAAG 252795 2.500815 7.801606 1
GAGGATG 236075 2.5004416 5.1884255 2
GCCAGAG 217590 2.4965587 8.648067 1
TTCTGCA 251230 2.4950333 5.0078807 7
CAAGAAA 270505 2.4896617 6.2091804 1
CAGCAGT 233050 2.4877305 5.880404 1
GATGCTG 233825 2.4862843 7.3996425 5
TCATTTT 290295 2.4857273 5.931289 2
CCTGCCT 214785 2.483665 6.181734 1
CTGGCAG 216290 2.4816391 6.5714545 1
CTTCAAA 268155 2.47767 5.0416727 6
GAGATGG 233905 2.4774575 6.011271 3
TTTGAAA 289850 2.4722633 5.99125 6
TTTGAAG 269170 2.4677212 6.256315 6
CTGAAGG 231760 2.4643304 5.4419475 1
CAGGATG 231475 2.4613 5.3768826 2
CAGAGAA 247885 2.4522421 5.431207 1
AAGCTGC 229565 2.450529 5.1046576 5
GAAAAGG 248455 2.4483142 5.79438 2
GCCAGGA 213205 2.4462464 7.0145435 1
CCCAGAG 212200 2.4442296 6.838306 1
TCCAGGC 211730 2.438812 5.159909 7
CTCCATC 226410 2.4357722 6.0615883 1
CAGGAAA 246050 2.4340892 7.000734 1
GGGAAGG 213235 2.4275815 5.523828 2
CCCCACC 193565 2.42467 5.3385406 1
CTGGATG 227375 2.4177008 5.965511 2
AAAGATG 263485 2.415609 5.761912 2
TTGAAAA 282645 2.4108124 6.65388 7
GAAAACA 261580 2.4075186 5.39481 2
CTGCTCT 224630 2.4072125 5.6042075 1
CCTTTTC 241420 2.4069734 5.4543767 3
AGAAAAC 261495 2.4067364 5.9214463 2
GATGGAG 227145 2.4058573 8.913013 5
TTCCAGC 224410 2.4048584 5.1495194 6
CAGGGAG 210275 2.4032378 7.056369 1
TCTGCCT 224110 2.40164 5.697872 7
CTCAGCA 223980 2.400254 5.170445 1
CCCAGGG 193850 2.3999956 6.8432484 1
TTTTATT 301350 2.3913474 5.234657 2
CTCTGGG 208420 2.3913376 5.242208 1
CCAGCTT 222910 2.3887837 6.0870023 2
GGGGAAG 209615 2.3863697 9.290651 1
AAAATTT 300620 2.3855653 5.1829886 3
GGGAGAG 209090 2.3803928 8.014113 1
CTGGCTC 206470 2.3782213 5.0261874 2
CTGAAAA 257745 2.3722186 5.746696 1
AATAAAA 298925 2.372122 5.596201 5
CTCCAGA 221160 2.3700337 5.5294347 1
CTCCTTT 236985 2.362756 9.402708 1
GTTTTCT 256280 2.3587208 5.7509437 1
GGCTTCT 220840 2.3573856 5.442447 4
TGGCTTT 237930 2.3537467 5.6697216 2
CCGGGCC 175945 2.3505166 5.022258 1
AGATGGA 238490 2.3501136 8.306302 4
CTGGGGG 190860 2.344614 8.350412 1
TTTGCTG 236760 2.3421726 5.7338777 7
CTGCCTT 218550 2.3420572 5.3050504 1
AATGAAG 255270 2.3402946 6.2094254 5
GTTTTTT 274235 2.3390653 6.198716 1
GCCAGCT 202770 2.3356063 6.570337 1
CTTCATT 252445 2.3325074 5.9969673 1
TGCAGTG 218975 2.328383 5.361779 7
GAAGACA 234360 2.318444 5.637541 2
TTCAGCT 233340 2.3173628 5.6130767 7
AGAAACA 251400 2.3138244 5.0094666 2
AAAGCCA 232900 2.313004 5.761083 4
CTGGGGA 202015 2.3088307 8.922811 1
AAGATGG 233570 2.3016317 5.7255993 3
CATCCAG 214495 2.298609 5.6330776 5
TGGGAAG 216920 2.297557 5.439717 2
CTCAGCT 214035 2.293676 8.396351 1
AGGTGGA 216435 2.29242 5.1932364 4
CTTTGGG 215530 2.291748 5.2143598 1
GCCAGGG 185705 2.2902052 6.776446 1
CTGATGA 231390 2.2890556 5.0850177 8
CCCAAAG 213555 2.2885394 5.4197516 1
TCAGCTT 230335 2.28752 6.740634 2
AAAACCA 247540 2.287201 6.348487 4
TTCACCA 229350 2.2866414 6.41882 7
TCCTGCA 213225 2.2849958 5.1943927 7
GAAAAAT 267440 2.281125 7.960767 1
CCCAGAA 212215 2.2741792 5.4297237 1
TGGTTTT 247930 2.2729886 6.5722084 2
AACAGAA 246860 2.2720394 5.1933217 5
TCCATTT 245865 2.2717104 5.6133127 7
GAGCCAG 197820 2.2697241 5.4387155 5
TTCAAAA 265025 2.269356 5.4291453 7
CAAAAAG 246535 2.269048 6.8172526 1
CCAGGTG 197420 2.265131 6.2075815 2
CTGTTTT 245870 2.2629106 5.2456484 1
CCAGGTC 195920 2.2567046 6.3979487 2
CTGGCCT 195395 2.2506542 5.911151 1
CAGAGAG 211385 2.2476842 6.0554132 1
AAAATCA 262070 2.2440565 5.5090714 3
CTGGAGT 211005 2.2436366 9.152353 1
CTCTTTT 242630 2.2418168 6.246295 1
CTCAGGA 209905 2.2406652 7.2611065 1
AAGAAAC 243320 2.239458 7.21877 2
CTTGGCT 209780 2.239324 7.216386 1
CTGGCTT 209645 2.2378833 8.24446 1
CTGCAGT 209595 2.2373526 7.0723667 1
AAGCCAG 209420 2.2354913 5.0947337 5
CTGGGAA 210200 2.2350805 8.855533 1
CAGAAAT 242735 2.2340703 10.692622 1
CTCCTGA 208445 2.2337716 5.165451 1
AGAAATG 243365 2.2311504 6.0732512 2
GGGAAAG 210580 2.230409 8.072024 1
CTCTGGA 208735 2.2281725 5.1900444 1
TTTGCCA 224315 2.2277336 6.172075 7
GGAGGCA 194650 2.2246592 5.481489 4
AGAAATT 260690 2.2235477 7.594594 2
CTTCTGT 223475 2.219388 5.669569 1
TTTTGAA 260000 2.217656 5.396088 5
AAACAGA 240040 2.2092698 5.257682 4
CCCTTCT 205080 2.2062957 5.270721 1
CCAGGAC 191460 2.2053354 5.8522177 1
AATGAAA 257565 2.1968966 5.1580453 6
TGGAGCT 205715 2.187388 5.0798407 7
CCCGGCC 162910 2.1848812 6.5769105 1
GCTTCAG 204435 2.1822717 5.1195474 5
TTCAAAG 236600 2.1776023 5.0691524 7
CTTGGAG 204710 2.1767015 6.6540084 1
CTGGGTG 189800 2.169222 6.088559 1
CCACCAT 201325 2.165905 5.676178 1
GTTCTTC 217115 2.1562252 5.243478 5
CTCCAGT 200985 2.1538274 9.004638 1
GTGGAAG 202405 2.1438181 6.263448 1
AGAAACT 232880 2.1433675 6.16977 2
CTTTGAA 232700 2.1417046 5.0144267 1
TCTGCCA 199350 2.1363063 5.328989 7
GGAAGAT 216430 2.132732 9.577639 1
TGAATTT 250020 2.1325316 5.1781163 2
CCTGCTT 198830 2.1307309 5.7039266 1
GACAGAG 199875 2.1252968 5.648674 5
CAGAAAC 213965 2.1249542 9.338441 1
CTGAGAA 214540 2.1223683 6.2366734 1
CCAGGAT 198255 2.1163054 8.314016 1
AGCTTCA 212885 2.114222 5.0218744 4
AAATGGA 230090 2.1094463 5.642368 4
CTTTGCT 212360 2.1090019 6.1177745 1
AAAATGT 246930 2.106182 5.717758 3
GCCGGGG 158850 2.1056492 6.1488686 1
AAAATAT 265165 2.1042159 5.7072034 3
CTGCCAT 195950 2.0998707 6.8806205 1
TGGAGGT 198160 2.0988533 5.592188 7
TCTTGCT 211295 2.0984251 5.1557074 7
CTGGAAT 211400 2.0913022 12.892175 1
GGGGGAG 170725 2.089106 6.0235186 1
AGCTCCA 194435 2.0836387 5.0449777 4
CAGTTTT 224735 2.0683937 6.2167253 9
TGGAGAT 209400 2.063454 5.3596177 1
TTGGTTT 225005 2.0628152 5.2543545 2
AAATTCA 240540 2.0596962 7.436884 4
CCTGGGT 179085 2.0547585 7.3882036 1
GAAGAAT 224025 2.0538428 7.0551696 1
CTCAGGG 178305 2.045812 7.2600956 1
GGGAGAA 193090 2.045159 5.4109173 1
CAAAAAT 238650 2.0435152 6.8245654 1
GGAAGAC 192090 2.042518 6.8123403 1
CCGGGGC 153155 2.0380921 5.9190464 1
CTTCCAT 204110 2.034993 5.5989575 1
AATGGAA 221035 2.0264308 5.834131 5
CTTCAGT 203885 2.0248377 5.974543 1
GAAACTG 204590 2.0239367 5.7111564 3
CCCGGGG 151865 2.0209253 7.640275 1
CTGAGCT 189110 2.0186825 5.493004 1
TGGAATG 204850 2.0186179 6.028155 2
CCCTGCT 174050 2.0126262 6.9295683 1
AAACCAA 216950 2.0045576 5.011604 5
AAAACTG 217735 2.003977 5.026577 3
AAGCCAA 201600 2.0021534 5.0910544 5
TTCAAGA 217385 2.0007522 5.2917833 7
CTTGGCA 186790 1.9939173 5.0360813 1
AAAAACT 231910 1.9858022 5.3975453 2
AAGAACT 215365 1.982164 5.0051775 2
CTGGGAT 186355 1.9815308 15.173118 1
CAGCAAC 184860 1.9810323 5.1804247 1
AAACTGA 214645 1.9755374 6.0069356 4
CCTGGAC 171275 1.9728311 5.7182293 1
CTCAGAA 198520 1.9715624 6.0207677 1
TCTGGTG 185160 1.9688216 5.3320937 7
CCTGGAT 184405 1.9684583 9.014287 1
CTTGGAA 198730 1.9659625 5.711956 1
GGGCTTC 171190 1.9641738 5.1987653 3
CCAGTTT 197670 1.9631149 5.710366 2
CTGGGAC 171075 1.9628574 8.055503 1
TCAGTTT 213120 1.9614928 5.0351257 2
ATCCAGG 183715 1.9610958 6.0183287 6
CCCAGGT 170255 1.9610826 9.775119 1
CTGGCAC 169890 1.9568781 5.7664623 1
CCAGCAT 182520 1.955953 6.192568 1
TCTTGAA 212415 1.9550071 5.29177 5
CAGGAAC 182935 1.9527726 6.7098293 1
CCATCCA 180810 1.9451995 5.1697893 4
CCAGAAC 181185 1.9416494 7.2496033 1
TGGAAGT 196865 1.9399326 5.844789 2
CAGGGAA 182055 1.9358143 5.0461774 1
CTTTGGA 195250 1.9315331 5.219458 1
TCCAGTT 194360 1.9302423 6.2971106 2
TTCAGTT 209205 1.9254602 5.762718 7
CCAAAAT 208360 1.9251854 6.9900455 1
ATCTTCC 192980 1.9240263 5.2361455 6
CCCACCT 165265 1.9185113 6.35173 1
CTCATCT 192175 1.9160001 5.1026125 1
ATTAAAA 241345 1.915192 5.991169 6
TGGATTT 208735 1.9136568 5.2074485 2
AAAACAT 223190 1.9111344 5.039028 3
ATTTAAA 240350 1.9072937 5.5592666 6
CTGGAAC 178425 1.9046268 7.911726 1
CCAGATG 178345 1.903773 6.1030455 2
AAAATCT 221820 1.8994004 5.84367 3
AGAGCCA 177835 1.8983318 5.0104513 4
TGAAATT 221960 1.8931984 6.725609 2
GCCAGGT 164795 1.8908027 7.9327216 1
AAATCAA 220560 1.8886142 6.329526 4
CAGGAGT 177420 1.8865271 5.115431 1
CAGAGAC 176155 1.8803984 6.476401 1
CCCATCT 174520 1.8775274 7.448096 1
CTCGGCC 150590 1.8716896 5.0599585 1
GCCAGAA 175310 1.8713781 6.3820353 1
AACTGAA 203295 1.8710748 5.039184 5
GGAAATG 189855 1.8708576 6.197777 2
GTGGGAG 164290 1.8703628 5.535187 1
AAATCCA 202180 1.8680842 7.221017 4
AAATACA 217870 1.8655802 5.082741 4
TGGGCTT 174410 1.8545159 6.8558755 2
CTGAAAG 187365 1.8535357 6.034154 1
AATTTCA 216305 1.8521737 5.3416414 4
GGAAAAT 201485 1.8471979 9.541967 1
CTGGTCT 172950 1.8461775 6.5508695 1
CTCAGAG 172935 1.846023 6.0592003 1
AAAAATC 215365 1.8441304 5.1266723 2
AAGAATT 215915 1.8416407 6.1820154 2
CGGGGGC 138435 1.8350366 5.642346 3
CCACATC 170365 1.8328296 5.2750044 2
CTCCACT 170045 1.8293842 6.376931 1
GAAAAAC 198505 1.8269917 6.042176 1
CAGGTTC 170820 1.8234434 5.487261 3
CTGAAGT 184225 1.8224698 5.8040094 1
ATCTGCT 182905 1.8164792 5.178805 6
TGGAGTT 184330 1.8164085 5.3173504 7
GAAGATC 182460 1.8050122 5.789401 2
CCGGGGG 135845 1.8007047 6.247547 1
CAAAGAT 195620 1.8004359 6.6459546 1
GGAAACT 181960 1.800066 5.9513054 1
AGAAACC 181175 1.7993065 5.7103915 2
ATCAAGA 195435 1.7987334 5.090558 6
GGGAGGT 157795 1.7964201 5.3490396 3
CTGGTTT 181520 1.7957051 9.725485 1
GAAATGA 195545 1.7927406 5.5485415 4
CTTGGGG 156790 1.7919511 5.9503036 1
TCTGATG 180850 1.7890794 5.393349 7
CTGGTGT 167850 1.7847627 7.2723994 1
GGGGAAA 168490 1.7846023 5.011751 1
CAAAAAC 192785 1.7812792 6.2205467 1
AGAACCA 179100 1.778699 5.7148833 4
GGCTTCA 165995 1.7719381 5.502044 4
TGGGATT 179745 1.7712274 9.865071 2
CCCTCTT 164505 1.769781 5.650344 2
TGGCATT 178715 1.767959 5.1543 2
CTTTGTT 192090 1.7679362 5.134312 1
CTGAGAG 166260 1.7678615 5.412265 1
CCTGTCT 164815 1.7662144 5.0707107 1
CTTTTGT 191810 1.765359 5.121465 1
ATTTGAA 206755 1.763508 5.1540647 5
CTCTGGT 164620 1.7572578 7.4796124 1
TTCAAAT 205215 1.7572124 5.1343784 7
CAGATTT 190775 1.7558386 5.403339 3
GTGGAAA 178175 1.7557613 5.079953 1
CTGGCAT 164405 1.7549655 8.23454 1
CAAAGAC 176365 1.7515367 5.0966353 1
CAGAGAT 176570 1.7467446 7.41957 1
CTGCATT 175840 1.7463151 5.725026 1
GGAAGTG 164810 1.7456223 5.484053 3
CTCCTGT 162800 1.7446209 7.224641 1
CAGGTGT 163825 1.7419671 7.3158994 3
CTGGGGT 152380 1.7415495 10.916867 1
GAAATGG 176445 1.738714 5.001304 3
GGGTCTG 151900 1.7360631 9.373264 4
CCTCCAT 161270 1.7349807 5.260718 1
GAAGATT 189040 1.7331007 5.642485 2
GAGAAAT 188680 1.7298027 5.694469 1
GATCTTC 173870 1.7267505 5.991895 5
GGAGAAT 174645 1.7209762 8.335158 1
CCAAGAT 173215 1.7202504 6.7878027 1
AAATGTT 201585 1.7194108 5.110555 4
CAGGCAT 160770 1.7161657 6.1436315 1
GGCTTTT 173070 1.7121124 5.0070176 3
GGAGGAT 161625 1.7118877 5.948058 1
CTCAAAG 171870 1.7068931 5.406215 1
AAATCTG 185405 1.7064176 5.750037 4
CAGGGAC 148705 1.7061939 5.5838757 1
GATGCAG 159875 1.699969 5.836625 5
CCAGGTT 158875 1.6959345 5.5625353 1
CCCCTCT 145885 1.693532 6.3247147 1
CACAGAT 170445 1.6927407 6.7000093 1
AACACAG 169175 1.6801305 5.539178 5
TGGAATT 182820 1.676074 6.97313 2
TTCAACA 181255 1.6747406 5.0717683 7
GGAAAAC 169165 1.6734918 6.0525737 1
CTTGGGA 157330 1.6729052 5.669512 1
CTCTGTT 168210 1.6705369 5.683431 1
CTGAGGT 157035 1.6697685 5.417204 1
CTGAAAT 181135 1.6671175 8.714239 1
AAGTGAA 181790 1.6666358 5.1560407 5
GCTGGAT 156730 1.6665254 6.193917 1
CAAGAAC 167640 1.6648858 5.7158093 1
GATCTTG 168215 1.6640862 6.253885 5
TTTAATT 208600 1.6553372 5.367306 7
CGGGAGG 134640 1.6539836 5.509794 1
CAGCAAT 166515 1.6537106 5.932974 1
CTGGATT 167000 1.6520671 7.249248 1
CTGGACT 154040 1.6443226 6.1088557 1
CAGATCC 153010 1.6397127 5.4090056 3
GAAAGAT 178590 1.6372983 5.1100926 1
GAAAATC 177730 1.6357813 5.484716 2
CTTGTTT 177715 1.6356332 5.044387 1
CCAGGGT 142525 1.6352842 5.156803 1
CAAATTC 176900 1.6345016 5.196651 3
TCAAATT 189755 1.6248317 5.15454 2
AGAAATC 176500 1.6244607 6.092702 2
GGATCTG 152750 1.6242057 5.5399857 4
AATTAAA 204085 1.6195157 5.179061 5
GGTGTTG 152580 1.6160805 5.0157104 5
GGGGATG 141785 1.614154 6.551261 2
CTCCCTT 150000 1.6137328 6.231764 1
CAGGAAT 163115 1.613639 8.243456 1
AATGCAG 162905 1.6115618 5.195481 5
GAAATTG 175720 1.6109843 6.670319 3
CGAGGAG 140950 1.6109208 5.567459 1
CCAGATC 149615 1.6033306 6.959433 2
AATCCAG 161155 1.6004794 5.8902774 5
CTGAGAT 160150 1.5843049 7.8936377 1
CTTTGAT 171720 1.5804596 6.106372 1
CTCCGGG 127595 1.5797108 5.8582263 1
ATCCAGC 146895 1.574182 5.134572 6
CTCCCCT 135565 1.5737305 5.600964 1
CGGGGAG 127765 1.5695276 9.162032 1
AGATCTT 170255 1.5669783 5.129213 4
CTCCATT 156415 1.55947 6.6241183 1
CTCATTT 168680 1.5585468 5.919587 1
CGGGGGG 118025 1.5584005 5.0682764 1
CCCAGAT 145195 1.5559642 10.126494 1
CTGTGAT 157095 1.5540806 5.7349606 1
AAAGATT 181475 1.5478858 5.5471487 2
CAGATTC 155700 1.5463014 5.4608817 3
CAGATCT 154285 1.5322486 5.4470215 3
CAAGAAT 166365 1.5311804 5.4169664 1
TGGGGTC 133875 1.530056 5.593248 2
ATTCAAA 178205 1.5259336 5.2538733 6
CCCGGAG 123230 1.5256715 5.8467145 1
GCAGGAT 143075 1.5213327 5.0263805 1
CAGATGT 153670 1.5202005 5.3613906 3
ATCCAAA 164115 1.5163746 5.157729 6
CCCAGTC 131045 1.5153403 5.5568743 2
CCGCCAC 121425 1.5150963 7.19291 1
CCGGGAG 122740 1.5136902 8.721591 1
AATCAAA 176710 1.5131348 5.174221 5
CTTGAAC 152340 1.5129323 5.160333 6
CCAGAAT 152330 1.5128351 6.4089055 1
TGGGTTT 153445 1.5120617 6.8991213 2
GAAATTC 164015 1.5095496 5.009443 3
CCCCAGT 130540 1.5095007 8.193903 1
GAATCTG 152575 1.5093681 5.1726 4
GGAGATC 141870 1.5085199 5.658835 2
CTGAATT 163845 1.5079826 6.303361 1
CTGGGTT 141475 1.5043153 9.290861 1
GTGGGAA 141545 1.4992058 5.0610237 1
GCGGGAG 122040 1.4991989 6.155651 1
GATCCAG 140245 1.4970682 5.730326 5
ATTGAAG 163155 1.4957894 5.360736 6
GGGCTTT 140395 1.4928315 5.1146913 3
AGATCTG 150630 1.4901268 5.057551 4
CCTGGTT 138835 1.4820125 6.1833453 1
GATGTTG 150335 1.4814177 5.404438 5
CCCAGAC 127470 1.4740028 6.6229224 1
GATCCTG 137270 1.4653089 5.159272 5
GCCAGTT 137110 1.4636009 5.8803945 1
CTCTGAT 145275 1.4427655 6.224059 1
TGGGGTT 136090 1.4414237 5.0750833 2
CCAAATC 144310 1.4387866 5.1668477 2
CTGTAAT 155835 1.4342608 5.5282874 1
CAGATCA 143595 1.4260852 5.1097665 3
CCCGGCT 114560 1.4238712 6.413136 1
GGTTTCA 143915 1.4236957 6.0653706 4
CACAGGT 133170 1.421545 6.729685 1
AGATCCA 143135 1.4215168 5.788793 4
GAAACCT 142980 1.4199778 5.2437487 3
AATTTAA 178485 1.4163649 6.1462045 5
GGCAGAT 133025 1.4144698 5.2341638 1
ATTGAAA 165820 1.4143567 5.844453 6
TGGGATG 133135 1.4101274 5.5924544 2
CTGAAAC 141985 1.4100958 5.5124907 1
GGGTTTT 141365 1.3930241 5.890601 3
GGAATCC 130340 1.3913357 5.3233957 3
CGCTGCT 120450 1.3874013 5.005453 1
GAAATCT 150545 1.3855755 5.4119115 3
ATGGAGT 139875 1.3783457 5.0331454 6
CCCCACT 118665 1.3775458 6.5893793 1
CTCCAAT 138010 1.3759729 6.17417 1
CTCAGGT 128860 1.375535 6.1783876 1
GGGAGAT 129630 1.3730053 7.1356983 1
AATCCAA 148435 1.3714961 5.3296566 5
TGGAATC 138435 1.3694866 5.4856567 2
CCCAGTT 127500 1.366336 6.7160845 1
AAATTGA 160100 1.3655684 6.348526 4
AATTCAA 158995 1.3614426 5.245911 5
CTCGGGG 110180 1.3587921 6.3174057 1
GGAATTT 147770 1.3547393 5.30554 3
GGGAAAT 136755 1.3476028 8.303064 1
TCAGATT 146315 1.3466414 5.0008807 2
GTGAAAT 145605 1.3348929 6.3385534 1
ACAGATT 144835 1.3330219 5.052267 2
GTGGAAT 135105 1.3313416 6.028997 1
GAAATGT 144640 1.3260458 5.1008325 3
CTCAAAT 143420 1.3251568 6.3623934 1
CCCATTT 132900 1.3250237 5.4366016 1
GATCTGC 123945 1.3230691 5.2287903 5
CAGGGAT 124385 1.3225999 6.7579093 1
GGTCTGC 115000 1.3194695 5.625504 5
CGGGGCT 106845 1.3176631 5.4624615 1
TTGAACT 143010 1.3162233 5.5743465 7
CTCAGAT 132530 1.3161936 7.328414 1
CTTGGAT 132845 1.3141847 6.301092 1
CCGGGGA 106455 1.3128555 6.0075693 1
CTTGGTT 130480 1.2907866 5.1504107 1
CTCAGTT 129550 1.2865964 5.521716 1
GGAAATC 129730 1.283373 5.2095404 2
CCCAAAT 128685 1.2830036 8.131733 1
GCTGAAT 129405 1.2801559 5.2839046 1
GGGTTTC 120040 1.2763951 5.25814 3
GAGATGT 129290 1.2740399 5.303849 3
AGATTCA 138355 1.2733817 5.210569 4
GGGGTTT 119390 1.2645422 5.385501 2
CTTGAAT 137100 1.2618293 5.3398714 1
CCTGAAT 126920 1.2604791 5.105862 1
GGGGTCT 109650 1.2531886 6.209983 3
AGATTGA 136100 1.2477518 6.636062 4
AGGTGTC 116845 1.2424242 5.075022 4
CCCAAAC 114800 1.2350492 5.5860887 1
TGGGATC 116125 1.2347686 5.54011 2
CAGATTG 124600 1.2326217 5.402809 3
CCCCATT 114390 1.2306346 5.8363433 1
CTCCCAT 114165 1.228214 5.6411314 1
GCCAGAT 114850 1.2259852 6.560822 1
GGAATCT 123335 1.2201077 5.053054 3
AATTGAA 142110 1.2121232 6.499131 5
CTGCAAT 121695 1.2085881 5.332276 1
GAATTCA 130710 1.2030193 5.064998 4
GGGATTT 121015 1.192495 5.652235 3
GTGGGAT 110315 1.1684244 5.893842 1
CGGGAAG 101020 1.1545599 5.5142837 1
CCGGGCT 93080 1.1523923 5.5010877 1
CCCGCCT 91925 1.1470045 5.277116 1
CCCTGAT 105740 1.133148 5.110606 1
CCGAGAG 97675 1.120692 5.0607214 1
CCCACAT 103065 1.1087992 6.166712 1
GGGATCT 103495 1.1004723 5.357078 3
CCCCCAT 91760 1.0652139 6.5191646 1
CCCCGCT 84370 1.0527362 5.8866835 1
CGGGGGA 84750 1.0411104 5.5498023 1
GGGATTA 103530 1.0201975 5.5376396 3
GAGATCG 94600 1.0058925 5.056291 90-94
GGGGAAT 93175 0.98688394 6.736533 1
CTGGTAT 97355 0.9630957 5.564661 1
CCGGGAC 75850 0.9390748 5.5298977 1
CCCGGGT 74420 0.921369 6.2499266 1
CGGGTCT 79785 0.915425 5.7805576 3
CTCGGCT 79195 0.9122063 5.1823053 1
GGGGGAT 79950 0.9101924 5.720576 1
AGATCGG 80470 0.85564667 9.289534 90-94
CGGGGGT 69530 0.8541392 5.1154127 1
CCCGCTT 73565 0.85066843 5.2886376 1
CGGGGAA 71430 0.816375 5.274994 1
CGGGGAT 69690 0.7964874 5.429194 1
GTCGGGG 63705 0.7825822 5.526933 1
CCCGTCT 65975 0.7629015 5.0250125 1
CTCCCGT 62270 0.72005874 5.42314 1
CCCGGAT 61785 0.7116706 5.954033 1
ATCGGAA 70085 0.6933261 5.3619733 90-94
CCGGGTT 59785 0.6859521 5.370328 1
GATCGGA 59370 0.63128793 7.7247505 90-94
CCGGGAT 52930 0.6073011 6.4166436 1
CGGGGTT 52905 0.6046506 6.024749 1