FastQCFastQC Report
Thu 28 Nov 2013
HUH7-MARV-3h_R1_clipped.fastq

Summary

[OK] Basic Statistics

Measure Value
Filename HUH7-MARV-3h_R1_clipped.fastq
File type Conventional base calls
Encoding Sanger / Illumina 1.9
Total Sequences 22027445
Filtered Sequences 0
Sequence length 20-100
%GC 48

[OK] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[WARN] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[WARN] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[OK] Overrepresented sequences

No overrepresented sequences

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
AAAAAAA 2187970 13.734206 16.348785 90-94
TTTTTTT 1994245 12.399824 15.584417 90-94
GCTGCTG 723660 6.4519725 10.476741 5
CAGCAGC 690455 6.194368 9.340483 9
CTGCTGC 615030 5.5027432 8.05792 6
GGAGGAG 585875 5.2010555 10.140347 1
TTTTCTT 773785 5.181751 9.249617 2
AAGAAGA 716245 5.1645617 8.701602 2
GCAGCAG 574420 5.1353035 6.791372 8
GAAGAAG 664145 5.132626 9.873975 1
GAGGAGG 576770 5.120227 7.7395096 2
AAGAAAA 752045 5.059538 7.2921877 5
CTTCTTC 650575 5.0534964 7.2161827 5
TCTTCTT 696225 5.021402 9.964788 7
AGAAGAA 671305 4.840517 6.3836265 3
CTCCTCC 536635 4.835173 7.478985 1
TTCTTCT 668050 4.8181953 8.924661 6
TTTCTTT 714125 4.78223 6.4018097 6
CCTCCTC 527595 4.7537217 5.3074045 10-14
AAAGAAA 701110 4.716862 6.91371 4
AGGAGGA 557070 4.614147 7.637192 4
TGCTGCT 545275 4.5298038 7.802547 7
TTCTTTT 659740 4.418034 7.0096464 2
GAAGAAA 606460 4.3729453 9.400583 1
GGAGAAG 523545 4.3364635 12.278411 1
TCCTCCT 517890 4.332628 5.5769444 7
AAAAGAA 640800 4.311115 7.3520236 3
AGCAGCA 516160 4.305425 5.12977 6
GCTGCAG 478395 4.271043 7.641876 5
TTCTTCA 590200 4.262496 7.1628633 6
CTCCAGC 472655 4.2495365 7.6204457 6
TTTCTTC 583655 4.209511 7.545704 5
TGAAGAA 584330 4.2076616 7.4264812 8
CTGCAGC 467730 4.1905165 6.426749 6
CTTCTCC 492025 4.1162434 5.9933443 6
CTGCTGG 459830 4.0997295 5.752666 8
TTTTTCT 609400 4.0809255 5.417395 6
AGGAAGA 522180 4.035496 5.702132 2
AGAAAAA 595455 4.0060463 5.0607133 6
GCAGCTG 443080 3.9557552 6.4872866 8
GCTGGAG 444570 3.9551446 7.6481967 5
CAGCTGC 439360 3.9363422 6.6228333 9
GAGGAAG 474870 3.933294 6.481007 5
CTTCCTC 469640 3.9289718 5.467955 8
CCAGCAG 437070 3.921142 6.297753 8
TCTTCCT 500605 3.8885694 7.6606703 7
GAAGATG 493955 3.8121927 10.896914 2
AGCTGCT 445335 3.7045884 5.8859563 6
CCTGCTG 413475 3.6994083 5.103062 2
GGAGCTG 415780 3.699013 7.4497747 4
CATCTTC 471235 3.665401 6.4950614 5
GAAGAGG 439950 3.6440554 7.117146 2
CAGCAGG 407430 3.6424165 5.514774 9
CTTCTTT 504910 3.6415758 7.681321 1
GGAAGAG 437585 3.6244667 12.081864 1
AGCAGCT 434900 3.6226954 4.9368114 6
CCTCTTC 432505 3.6183035 7.1340003 3
CCTGGGC 376510 3.615378 5.222836 1
TGGAGAA 467325 3.606671 4.3477836 7
CAGCTCC 399940 3.5957725 6.8595867 3
CTCCAGG 401310 3.595442 7.353357 1
AAAAAGA 534110 3.5933354 8.2409115 2
AAAGAAG 496695 3.5814729 5.9742613 4
TCTTCAT 494425 3.570797 6.554782 7
TCTTTTT 532510 3.566022 4.753867 7
CCGCCGC 343230 3.5621047 5.846863 2
CAGCTTC 426385 3.5594265 7.5807943 3
TTCTCCA 456435 3.5502822 6.158568 7
GGAAGAA 458875 3.5462651 8.741309 1
CCTGGAG 396890 3.5433776 8.769004 1
CCAGGAG 392440 3.5084062 7.0962734 1
GAAGCTG 421995 3.5028756 7.140073 4
GCGGCGG 341055 3.5024397 6.159053 1
CAGGAGG 391485 3.4875998 6.1512046 1
CAGCCTG 388895 3.484213 5.355784 9
CTCCTTC 416035 3.4805167 6.5938945 1
GAGGCTG 389385 3.464188 5.5292163 5
AGGAGAA 448240 3.464076 4.281904 4
TCCTTCT 445300 3.4589746 5.080854 3
TCTTCAG 446065 3.4574592 6.216306 7
GCCTGGG 359950 3.4442472 5.676453 1
TTCTCCT 442310 3.435749 6.023744 7
CAGGCTG 384540 3.4331183 4.5935664 9
CTGGAGG 385860 3.4328272 8.634779 1
ATGAAGA 475740 3.4257233 6.5756335 6
AAAAAAT 545350 3.4185996 5.751678 1
ATTTTTT 548765 3.4167466 5.6693325 1
TCTTCTG 440790 3.4119394 6.143061 7
AGAAGGA 441190 3.409592 5.874585 4
CTGAAGA 437320 3.3869739 5.08457 1
CAGCCTC 376405 3.3841743 5.5292163 8
TTCTTCC 435595 3.3835886 6.901805 6
CTGCAGG 378230 3.3767836 5.5704565 1
GAAAAAA 501005 3.3706145 8.551897 1
CTCTTCT 433600 3.368092 6.5886445 1
AGAAGAG 434960 3.3614454 4.9830675 3
CTGGCTG 376515 3.356914 5.354779 2
TCTCCAG 401530 3.3519392 4.815441 7
CCAGCTG 374015 3.3508992 6.181172 2
CAGCTGG 375150 3.349286 5.38685 9
GGAGCAG 375730 3.3472443 6.258019 4
TTTGTTT 501480 3.3464537 5.7588067 2
CCTGCAG 372750 3.3395655 4.972188 8
GAGAAGA 431715 3.3363674 6.737576 2
GAAGGAG 402500 3.3338616 5.3828583 5
AAACAAA 493640 3.332748 6.4635687 5
CCTGGCC 345855 3.3327005 6.079623 1
CTCCTGG 372140 3.3295794 5.640753 1
TTTTAAA 532105 3.32202 6.5724025 6
CCTCCTG 369710 3.319474 3.8143516 10-14
GCCCAGG 345130 3.3185565 4.3351593 1
TCTTTCT 459180 3.3117564 4.395244 7
CCACCAC 366280 3.3092146 5.271376 1
GGCCAGG 345115 3.3067796 4.7069545 6
AGAAAGA 458515 3.306172 5.222974 2
CTTTTCT 457490 3.2995675 8.698115 1
TTTAAAA 527170 3.2956793 7.3084116 7
CCTCCAG 365805 3.2888722 4.161552 5
CTGGAGA 396090 3.287844 8.079673 1
GTGGTGG 370990 3.284506 4.534505 6
CAGCCAG 365965 3.2832289 4.461562 9
AAAACAA 486070 3.2816398 6.6490765 4
CTGCTCC 365240 3.2793393 4.7951994 3
CTCCTGC 364395 3.2717526 6.629789 1
CATCATC 418965 3.2632551 4.666989 9
TTTCTCT 452445 3.2631814 5.7003756 6
CTTCATC 419090 3.259802 5.8618355 6
CTGGAAG 392315 3.2565086 10.906785 1
GATGATG 422505 3.2563422 6.6440206 2
TCTTCTC 417830 3.2455943 5.503396 7
TTTTTTC 484595 3.245153 5.028253 2
TTAAAAA 517780 3.2413716 7.2134967 7
AGAGGAA 419015 3.2382202 5.547421 4
TTTTTAA 519265 3.237462 6.0820355 5
GAGCTGG 363500 3.2339003 6.3322964 9
GGTGGTG 365245 3.2336435 4.583929 5
CAGGAAG 388705 3.2309246 10.380157 1
CTCTTCC 385880 3.2282424 4.880295 6
AGGAAAA 447310 3.225377 3.8942828 40-44
GCAGGAG 361775 3.2229242 5.5294523 1
CCCAGCC 332145 3.216209 8.893617 1
GCCGCCG 310710 3.2133021 4.5175004 7
GAGGCAG 358620 3.1948173 7.1529837 5
CACCACC 353445 3.1932547 5.203313 9
TCTCCTT 410550 3.189045 5.423898 7
AAGGAAA 442180 3.1883867 4.380763 6
TGGAAGA 412915 3.186751 5.9098253 2
TTTTCCT 440965 3.1803837 5.096451 6
CTTTTTT 474275 3.1760437 8.154075 1
CCAGCCT 352550 3.1696994 5.3744655 8
CTGCTTC 380025 3.1681151 6.007544 3
AGAAAAG 439035 3.1657093 6.0280566 2
CTTCCTG 379620 3.164739 4.2310514 8
TTGTTTT 474150 3.1640763 4.6287766 2
CCAGCTC 351550 3.1607087 7.4660854 2
AAAAAAG 469690 3.159937 5.4428205 2
GATGAAG 409360 3.1593144 8.472944 5
TCCTGCT 378830 3.158153 6.139118 7
TGGAGGA 381635 3.1567523 4.990782 7
AGAGAAA 437410 3.153992 4.5821676 4
CAGAAGA 406625 3.1535223 5.062607 1
GGTGGAG 354810 3.1455243 7.905952 5
CGGCGGC 305220 3.1454608 5.710057 2
AAGAGGA 406865 3.1443224 4.3934402 3
CCCAGGC 325700 3.1427457 7.7714725 1
GCCCAGC 325305 3.1389346 4.3855166 6
CTTTCTT 434905 3.1366768 5.6846476 1
GGCTGGG 328870 3.1358216 3.8813565 4
CAAGAAG 404160 3.1344051 7.9637733 1
CTGGGCC 326380 3.1340122 5.5266447 1
CTGCCTC 349050 3.133976 5.475774 8
GCTGAGG 352210 3.1334581 4.14691 6
GCCCTGG 326305 3.1332922 3.5056508 55-59
TTTCCTT 433565 3.1270125 5.6567793 7
CTTCCAG 374510 3.1263783 4.88921 5
CTTCTGC 374900 3.1253903 4.9329944 6
AAAGGAA 432695 3.119994 5.2998533 5
TCCTCTT 401060 3.1153297 6.768459 2
CTTCTTG 402470 3.1153228 5.044784 5
GAGGTGG 351360 3.1149387 5.448247 3
CGCCGCC 300135 3.1148567 5.0846906 1
CCTTCTT 400995 3.1148248 5.2000055 4
TCTCTTC 400465 3.1107075 4.6361504 7
CCCCCCC 297510 3.109375 6.496967 90-94
TTCCTCT 399930 3.1065521 4.119403 8
GAAGAGA 401630 3.1038654 5.8026805 4
CACACAC 368965 3.0993237 6.9842706 1
AAGATGA 428140 3.0829637 6.770265 3
TCTTCCA 396160 3.081446 6.1549497 7
CTCCTCT 367910 3.0779066 9.2719345 1
GAAAGAA 426485 3.075216 6.4851274 1
AACAAAA 455475 3.0750816 5.6815333 5
GGGGGGG 301340 3.0729327 5.7222147 90-94
TTCCTTT 425340 3.067691 4.667237 2
AAGAAGG 396280 3.0625198 4.720618 2
GGCCCAG 318495 3.0624504 4.11071 5
AAGAAAG 424520 3.0610473 4.9512587 2
AGAGGAG 369390 3.0596151 4.4582396 4
TTCTCTT 424040 3.058315 5.616517 7
CCACCTC 338435 3.0534983 5.6119165 2
GGAGGCC 318050 3.047452 4.2124043 3
TTTTGTT 456300 3.0449605 5.109722 7
TCCTCCA 363335 3.04376 4.0256844 7
CTCTTCA 391075 3.0418935 5.5472083 4
GGCTGCT 341050 3.0407171 5.3878503 4
CCAGGCC 315020 3.0396924 4.4708037 8
GAAGCAG 365510 3.0381272 5.800245 4
GGGGCTG 318415 3.036132 5.5227304 2
AAGGAGA 392680 3.0346982 3.9870884 9
GCTGGGC 317090 3.0341334 3.6057198 90-94
AAAAACA 449315 3.0334933 6.5424247 2
GAGGAGA 365715 3.0291755 4.5238385 2
GGCCTGG 316470 3.0282006 4.0062885 9
CCAGGGC 314635 3.0253353 5.309756 2
AGCCTGG 338350 3.020741 3.6156654 55-59
CCAGGCT 336870 3.0181072 6.490463 1
TCCAGCT 361340 3.016436 7.3979144 7
AGCTGGA 362940 3.0126746 5.344435 4
ACAGCAG 361085 3.0119042 3.7833033 8
GTGTGTG 365010 3.0110538 4.935025 6
GGAGGAA 362675 3.0039957 4.7780614 4
CTGCTGT 361515 3.00324 7.699594 1
CCTCAGC 333780 3.0009425 3.886224 1
CCTTCTC 358625 3.0002291 4.140987 4
CTTCTCT 385175 2.991939 5.5296907 1
CAGAAAA 413100 2.9891803 9.120543 1
GAGAAGG 360750 2.9880507 5.140375 2
CTTCAGC 357835 2.9871767 5.5843377 6
TGCTGCC 333515 2.983997 5.119463 7
AGCAGCC 332370 2.981834 5.262734 6
TCATCTT 411820 2.9742134 5.278076 8
CCCAGGA 331270 2.971965 8.29002 1
TCCAGCA 355140 2.9687047 6.089693 7
CTGGAGC 331540 2.9599419 5.6618433 1
GGGGAGG 310535 2.954622 7.4451723 2
GCTCCAG 329410 2.951271 6.6309743 5
AAGAGAA 409200 2.9505808 5.5313025 5
ACACACA 377775 2.9504287 5.5044374 4
TGCTGGA 355355 2.9457135 5.1133776 7
AAAAATA 469640 2.944001 6.3458405 2
TGAAGAT 409285 2.9431958 5.811763 1
TCAGCAG 352940 2.9399724 5.3049417 8
CTGGGCA 328605 2.9337387 6.7834115 1
CAAAAAA 434420 2.9329314 5.5098076 1
TCTCCTC 349685 2.9254375 5.078794 7
ATCTTCA 403905 2.9210114 6.321432 6
TCTGCTG 350930 2.9153068 5.634528 7
TCCAGGA 349540 2.9116504 6.506229 7
CCAGAAG 348950 2.9106832 6.613267 1
AGAAGAT 403940 2.9087036 6.767819 1
TTCTGCT 375220 2.9043941 5.3868814 7
CCTGGCT 324130 2.9000285 9.570546 1
CCAGCCC 298995 2.895213 5.554398 2
CTGGTGG 325305 2.8901718 6.01052 1
GCAGAAG 347385 2.887472 5.514942 1
CCCAGCT 319765 2.8749363 10.784375 1
TCTGCAG 344670 2.8671906 5.1081457 7
CCCAGCA 317670 2.8599792 5.1272297 1
GGAGGTG 322215 2.8565576 5.4233966 4
CTCAGCC 317435 2.8539877 5.3587213 1
TCCTGGG 320030 2.853308 5.3379283 7
GGGAGGC 296800 2.8338726 6.2764683 3
GAGCAGC 316980 2.833795 5.8182073 5
CTGCCTG 316475 2.831538 5.0486884 8
ATCTTCT 391110 2.8246436 6.7025847 6
TGCTGTG 341075 2.8235054 5.048678 7
GGCAGAG 316305 2.8178482 5.405102 1
TGCTGGG 316800 2.8146093 5.3316164 7
TTCTGGA 363475 2.8074265 5.3429494 7
GTGGAGG 316055 2.8019464 6.4831247 6
GGAGAGG 314590 2.792746 5.038528 2
CTTCCTT 359500 2.792502 6.2742105 1
CCCCAGC 288100 2.789715 5.1541533 1
GAAAAGA 386785 2.788955 6.457434 2
GGGAAGA 336300 2.7855344 6.192341 2
TTGAAGA 386720 2.7809293 6.988243 7
CACCTCC 307440 2.7738488 5.3263736 9
CTTTTTC 384525 2.7733202 5.2551117 1
TAAAAAA 442405 2.7732751 5.220037 9
CCTGGGG 289735 2.7723823 6.1350217 1
AGAGAGA 358725 2.7722883 5.4863014 4
CTGGGAG 310980 2.7666526 11.4661255 1
CTGAGGA 333095 2.7649384 5.4727035 1
AAGAAGC 354815 2.751717 5.0475063 2
CCCCAGG 285010 2.75012 5.360565 1
CTGGGGC 287120 2.7473598 6.2997494 1
GGAAAAG 355085 2.7441578 11.844455 1
GAAAAAG 380270 2.741978 9.055022 1
GAGAGAG 331030 2.7418838 5.4175363 5
TTTATTT 440045 2.7398288 5.5556164 2
AGAAAAT 407790 2.7397711 6.5021324 1
TGCAGCA 327965 2.7319322 5.157708 7
GCCAGGC 282910 2.720287 5.7981067 1
CCTGAAG 326510 2.7198122 5.127634 1
AAATAAA 433345 2.7164812 5.077151 4
AAGAAAT 403845 2.7132664 5.920692 1
TGGGAGG 305710 2.710234 6.0009155 2
CTGCTTT 349870 2.708172 7.4083014 1
GAGCTGC 303175 2.7067032 6.4416027 5
TCCAGCC 300545 2.7021334 6.236073 7
GCTTCTT 348625 2.6985357 5.2970085 4
GAGAAAG 349090 2.6978273 5.3469048 1
AGAAGCT 347815 2.6937718 5.4694166 3
GGCAGGG 281940 2.691988 5.966329 1
GGAGAAA 347870 2.6883993 5.1563296 1
TGAAAAA 399560 2.6844773 5.4351573 8
GGGCTGC 280510 2.6841114 5.047776 5
GGAAAAA 371650 2.6798224 8.652428 1
AGAAGCA 343175 2.6614447 6.057604 4
AAAAATT 424360 2.65655 6.4537287 2
TTTTCAA 394705 2.6503756 5.413377 5
GGCTGCA 295575 2.6388514 5.158427 4
GGCAGCT 295445 2.6376908 5.4998393 1
TCCTTTT 365390 2.635312 5.378563 2
AAAGAGA 365395 2.63472 5.1893215 4
CATTTTC 364310 2.6310909 5.285064 3
CCAGCAC 291125 2.6209948 5.060208 1
TCTGCTT 337775 2.6145506 5.37634 2
AAATGAA 388570 2.6106403 6.8603644 5
GCTTCTG 314250 2.6105926 5.325347 5
TTCATCA 360720 2.6087005 6.526675 7
CTGGGCT 292405 2.6070104 10.262954 1
GTGCTGG 293210 2.6050239 5.2076063 6
CCAGAGG 291155 2.6029203 5.02413 2
CAAAGAA 359445 2.6009345 5.0972695 1
TTTCTTG 360200 2.588774 5.907746 5
TTCATTT 385330 2.5839155 6.73495 7
CAGCTCT 309370 2.582595 5.448696 3
ATTTTCA 384450 2.5815156 5.019947 4
GAGAAAA 357975 2.5812173 5.1733403 1
GAAGCCA 309435 2.581078 6.212572 4
TTCAGCA 331640 2.574039 5.9864454 7
GAAAATG 356920 2.5701206 7.16222 2
CTCTGCT 308185 2.5692143 8.033109 1
TTCATCT 354990 2.5637803 6.161696 7
CCTCCTT 306340 2.5628169 5.9166 1
GAGAAGC 307130 2.5528712 6.5312104 2
AGCTGCC 284785 2.551464 5.2389264 6
AAAAATG 379695 2.5510125 5.391681 2
CCCCTCC 262830 2.5505111 5.0930285 1
AGATGAA 354180 2.5503902 6.626089 4
CAGCTTT 328190 2.5438077 6.544739 3
GGGAGGA 286515 2.5435126 5.348981 1
TTCTTGG 329620 2.5424836 5.274686 6
CTGGAAA 327325 2.5350797 7.64307 1
GAGGATG 306410 2.5345173 5.645206 2
TGCAGCT 304575 2.5336545 5.23972 7
CCCCGCC 243190 2.5327492 6.2849402 1
CCTGCCT 281425 2.5267992 5.919604 1
GAAGAGC 303375 2.5216596 5.823566 2
AAAATGA 375225 2.5209808 6.638664 4
GGGAGGG 264800 2.5194712 5.511572 1
CCATCTC 300445 2.5169127 6.2629137 2
GGAGATG 303815 2.5130525 7.6539297 2
CAAGAAA 346000 2.5036466 5.7066517 1
GGCTGGA 281405 2.5035372 5.0161815 4
TTCTGCA 322270 2.4979215 5.2607837 7
GATGCTG 301035 2.495428 7.1147447 5
TTTCAAA 369855 2.4868846 5.7960787 6
CAGAAAG 320230 2.483498 7.364776 1
CAGGATG 299125 2.4829621 5.6998196 2
CTGGCAG 278000 2.4819443 6.455249 1
TTTCTGG 321615 2.480738 5.059393 6
CCCCACC 255045 2.4783258 5.9996686 1
CAGCAGT 297485 2.4780354 5.7051225 1
GCCAGGA 276660 2.473335 7.4539986 1
TCATTTT 368545 2.47136 5.671484 2
TCCAGGC 275485 2.4681425 5.180595 7
TTTCTGT 342905 2.4644742 5.219009 6
TTTGAAA 367010 2.459105 5.881739 6
GCCAGAG 274900 2.4576006 8.747633 1
CAGAGAA 316485 2.4544544 5.5136595 1
GAGATGG 296290 2.4508083 6.041555 3
CTGAAGG 295180 2.4502156 5.0015182 1
CCCAGAG 272980 2.4490206 6.599457 1
AAGCTGC 293600 2.4456732 5.1538157 5
GATGGAG 295355 2.4430745 8.877176 5
GGGAAGG 275085 2.4420438 5.877683 1
CCAGGCA 271615 2.4367745 5.1920557 2
CTGCTCT 292120 2.4352865 5.4653068 1
GAAAAGG 314950 2.4339876 5.7632523 2
TCTGCCT 291850 2.4330359 5.770694 7
AGAAAAC 336205 2.4327703 6.284903 2
GAAAACA 335920 2.430708 5.783323 2
CCCAGGG 252765 2.4304318 7.1805263 1
AAAGATG 337390 2.4294884 5.825585 2
TTTGAAG 338270 2.4292233 6.0299797 6
CTCCATC 289850 2.4281554 5.546548 1
TTCCAGC 290450 2.4246523 5.5843377 6
CTGGATG 292295 2.4229777 6.1548605 2
CTCTGGG 271110 2.4171493 5.326448 1
CAGGAAA 311650 2.4169574 6.957026 1
CAGGGAG 270965 2.4139304 6.8434224 1
TTTTATT 387345 2.4117055 5.567203 2
AATAAAA 383705 2.4053063 5.4298453 5
GGGGAAG 270705 2.4031608 9.541426 1
TTGAAAA 357660 2.3997102 6.2642927 7
CTCCTTT 307890 2.3916094 8.005402 1
GGGAGAG 268675 2.3851395 8.194887 1
CCAGCTT 284970 2.378906 5.954359 1
GAAGACA 305280 2.3675554 6.010826 2
TGCAGTG 285430 2.3660705 5.491289 7
GTTTTCT 328640 2.3619506 6.6110706 1
AAAATTT 377705 2.3612773 5.2845254 3
CTGCCTT 282880 2.3582566 5.085179 1
GGCTTCT 283830 2.357882 5.4028053 4
TGGCTTT 305665 2.3577094 5.5943294 2
CCTTTTC 302995 2.3535862 5.0121937 3
CTGGGGG 246445 2.3498874 8.407193 1
TTTGCTG 304195 2.3463707 5.884704 7
GTTTTTT 351535 2.3458474 7.007732 1
CTGGGGA 263260 2.3421087 8.812774 1
AGATGGA 303405 2.3415864 8.207522 4
TTCAGCT 300710 2.3308096 5.606935 7
TTTCCAA 321625 2.3259685 5.2381454 5
AATGAAG 322915 2.3252563 5.6678433 5
GCCAGCT 259455 2.3245256 7.044883 1
GTGGAGA 280365 2.319082 5.6690435 1
CTGAAAA 320890 2.3188026 5.3526077 1
GCCAGGG 242000 2.3187654 7.405012 1
AGGATGA 300300 2.317623 5.2024055 4
AAAGCCA 297645 2.3164632 5.5828967 4
AAAACCA 317885 2.308299 6.4926767 4
TTCACCA 296320 2.3079913 6.558251 7
AAGATGG 297975 2.2996793 5.7087545 3
AGGTGGA 277775 2.2976584 5.1294513 4
CTTCATT 318110 2.2974284 5.5176296 1
CTTTGGG 277395 2.2963462 5.04959 1
TCCTGCA 274835 2.2942998 5.0678635 7
CCAGGTG 256745 2.292183 6.171965 2
CAGAGAG 274815 2.2842684 5.7585897 1
TCAGCTT 294690 2.2841485 6.4509935 2
CATCCAG 273105 2.282954 5.7008066 5
CCCTCCT 253305 2.2823217 5.4457407 1
GAAAAAT 339690 2.2822356 8.637208 1
TGGGAAG 275760 2.280991 5.3142667 2
CTCAGCT 272925 2.2783551 7.3914833 1
GAGCCAG 254850 2.278354 5.4272766 5
CTGGCCT 254645 2.278338 5.407629 1
GGAGGCA 255630 2.2773163 5.358688 4
CCCAAAG 271940 2.2763016 5.366865 1
AACAGAA 314365 2.274737 5.331962 5
CTTCTGT 291135 2.2535334 5.312224 1
CTGCAGT 270865 2.2532322 6.661142 1
CTGGAGT 271640 2.2517583 9.233511 1
AAACAGA 310470 2.2465527 5.4162836 4
CCAGGTC 250365 2.243086 6.2353563 2
CAAAAAG 309770 2.2414875 6.753714 1
GGGAAAG 270535 2.2408104 8.2318535 1
CTCAGGA 268880 2.2397568 6.906608 1
CCCAGAA 267535 2.2394292 5.573283 1
CCAGGAC 249580 2.2390893 6.440837 1
TGGTTTT 312515 2.2381864 6.497067 2
AGAAATG 310470 2.235642 5.7753353 2
AAGAAAC 308885 2.2350836 7.1332135 2
TCCATTT 309280 2.2336571 5.200821 7
AAAATCA 331230 2.233225 5.2632203 3
CTGGCTT 267795 2.2246733 7.7227855 1
AAGCCAG 266355 2.2217367 5.044405 5
CAGAAAT 307230 2.2200933 10.859877 1
CACAGCT 265310 2.2177932 5.1767864 1
CCCTTCT 264595 2.2135813 5.052465 1
GGAAAGG 266015 2.2033718 5.225839 1
TTTGCCA 284140 2.2023752 6.010779 7
TTTTGAA 329100 2.2021031 5.31347 5
CTCTTTT 305025 2.19994 5.5202155 1
CTGGGAA 264975 2.1994913 8.095121 1
CCCGGCC 211905 2.1991894 6.837533 1
TGGAGCT 265060 2.1972136 5.1288023 7
AGAAATT 326640 2.1915824 7.288408 2
GTTCTTC 283080 2.1911836 5.4120703 5
CTGGGTG 246235 2.1876745 6.084928 1
CTTGGCT 263280 2.1871655 6.2965055 1
CCACCAT 260680 2.1867554 5.780459 1
AATGAAA 325210 2.1849506 5.0163455 6
CTTGGAG 263265 2.1823337 6.4256606 1
GTGGAAG 263155 2.176727 6.9467916 1
GGAAGAT 281910 2.1756947 10.542856 1
GCTTCAG 260800 2.1695051 5.208744 5
GACAGAG 260645 2.166487 5.37086 5
AAGGCAG 260360 2.164118 5.0460563 5
TCTGCCA 258195 2.1553905 5.1960163 7
CTCCAGT 256720 2.1430774 7.950798 1
TTCAAAG 296895 2.1425018 5.102678 7
CTGAGAA 276260 2.1395898 6.0827456 1
CTTTGCT 276385 2.1393607 5.78042 1
CCAGGAT 255645 2.1295102 8.968514 1
TGGAGGT 257665 2.1284254 5.1799927 7
CCTGCTT 254520 2.121831 6.0432568 1
AGAAACT 293625 2.1217813 6.007441 2
AAAATAT 338495 2.119024 5.856693 3
GCAGATG 255035 2.116982 5.2518663 2
AGCTCCA 252990 2.1148071 5.1837726 4
AAAATGT 314060 2.1071775 5.927481 3
CTGCCAT 251670 2.1009202 6.6263113 1
AAATGGA 290730 2.0934978 5.68142 4
CAGAAAC 268745 2.091545 8.480637 1
GGGGGAG 219700 2.0903616 6.095931 1
TTTCATC 287215 2.0743015 5.244479 6
CCCTGCT 230380 2.0684872 7.252246 1
CTGGAAT 266700 2.062748 11.936675 1
CAGTTTT 286440 2.0614529 5.865721 9
CTCAGGG 230380 2.0568 6.5798674 1
GGAAGAC 246900 2.0522382 6.7215776 1
AAATTCA 304765 2.0520055 7.0570474 4
TTGGTTT 285580 2.0452816 5.4975176 2
GAAGAAT 283820 2.0437398 6.9621425 1
GGGAGAA 246060 2.038087 5.302917 1
CAAAAAT 302140 2.0370936 6.7728295 1
CCTGGGT 228440 2.0367143 7.3093476 1
GCCGGGG 196905 2.0221016 5.399325 1
CTTCAGT 260875 2.0220475 5.359107 1
CTGAGCT 242005 2.013156 5.0045652 1
AAAAACT 298505 2.0125856 5.5423846 2
CTTCCAT 257710 2.0045424 5.2404337 1
CCTGGAC 223680 2.0040083 6.2028317 1
AATGGAA 278110 2.002623 5.852082 5
GAAACTG 257615 1.9951872 5.5378747 3
CTGGGAC 223215 1.9928317 7.8343625 1
AAACCAA 274265 1.9915555 5.0568337 5
TGGAATG 257995 1.9884262 6.256781 2
CAGCCAT 237750 1.9874123 5.2351274 1
CTGGGAT 239625 1.9863701 14.247532 1
AAACTGA 274490 1.9835091 6.1148915 4
TTCAAGA 273925 1.976742 5.3678827 7
CTCAGAA 254215 1.9757805 5.5761786 1
CAGCAAC 235310 1.9696866 5.1059217 1
CCCAGGT 219380 1.9654832 9.691924 1
CCCACCT 217765 1.9647645 6.8048754 1
CCTGGAT 235635 1.9601663 9.529188 1
CCAAAAT 270025 1.9581081 7.2170253 1
ATCCAGG 234975 1.9573303 5.9365745 6
CCAGCAT 234010 1.9561487 6.3474946 1
CCAGAAC 233590 1.9552892 7.4583073 1
CCCGGGG 189220 1.9500169 7.6048255 1
CCGGGGC 189145 1.9492438 5.8498654 1
CAGTTTC 251130 1.946514 5.4269047 3
CCAGTTT 250480 1.9414759 5.8956823 2
CTTGGAA 250950 1.9409323 5.3727636 1
GGGCTTC 217455 1.938775 5.342329 3
CCAGATG 232705 1.9384211 6.417414 2
ATCTTCC 248815 1.9353544 5.069402 6
TTCAGTT 268860 1.9349327 6.03966 7
TCTTGAA 268325 1.9337046 5.0253406 5
TGGAAGT 249675 1.9243017 5.6938496 2
CTGGCAC 214625 1.9228817 5.431646 1
CAGGAAC 230345 1.9213678 6.9897265 1
ATTAAAA 306875 1.9210786 5.8680434 6
AAAATCT 283300 1.9074804 5.7071414 3
TCCAGTT 245895 1.9059373 5.8199573 2
CTGGAAC 228785 1.9057674 7.677885 1
GCCAGGT 212480 1.8969911 8.44084 1
TGGATTT 263865 1.8923281 5.091275 2
CAGGAGT 227935 1.8920317 5.302768 1
CAGAGAC 226790 1.8917146 6.295023 1
GGGAAAA 244570 1.8900791 5.1599255 1
AATTTCA 280510 1.8861338 6.0465045 4
TGAAATT 279735 1.8743293 6.742376 2
TGGGCTT 226260 1.8730378 6.5778503 2
AAATACA 277755 1.872685 5.0184684 4
AAATCCA 258065 1.8713791 6.9662833 4
GTTCTTT 260215 1.8701771 5.313602 1
CCCATCT 223140 1.8693069 7.3512225 1
AACTGAA 258420 1.8673844 5.166737 5
AAATCAA 276935 1.8671563 6.1350775 4
CTGGTCT 224255 1.86297 6.3003707 1
GCCAGAA 223195 1.8617278 5.9651356 1
GGAAAAT 258505 1.8614508 9.846842 1
ATTTAAA 297340 1.858864 5.237725 6
GTGGGAG 209635 1.8584932 5.745966 1
GGAAATG 240775 1.8582274 5.917006 2
CTCGGCC 192400 1.8539895 5.0170336 1
CTGAAAG 239160 1.8522562 5.40168 1
CCACATC 220750 1.8517963 5.3543158 2
CTCAGAG 220235 1.8345463 5.5345883 1
ATCTGCT 236530 1.8333491 5.1057186 6
GAAAAAC 253280 1.8327272 6.4271374 1
AAGAATT 272320 1.8271238 6.0180087 2
CTCCACT 217795 1.8245302 5.7921085 1
TGGAGTT 236950 1.8237511 5.2705135 7
CAGGTTC 219080 1.8224509 5.584396 3
CAAAGAT 252200 1.822438 6.5125647 1
GAAGATC 234375 1.8151971 5.9378204 2
GAAATGA 251955 1.8142854 5.4971747 4
CGGGGGC 175935 1.806752 5.1788383 3
ATCAAGA 249840 1.8053843 5.1398425 6
GGGGAAA 217880 1.8046751 5.499464 1
CTGGTGT 217945 1.804204 7.1102543 1
AGAACCA 231715 1.803354 6.100636 4
GGGAGGT 201820 1.7892104 5.5266094 3
AGAAACC 229585 1.786777 5.152157 2
CTGGTTT 231390 1.7847983 8.939907 1
CTTGGGG 200675 1.7828968 5.6012754 1
CAAAAAC 245385 1.7818455 5.9362 1
TCTGATG 230650 1.7815063 5.1884465 7
CAGGTGT 214775 1.7803762 7.8825316 3
CCCTCTT 212780 1.7801011 5.2931004 2
ATTTGAA 264945 1.775231 5.295749 5
GGAAGTG 214585 1.7749728 5.956896 3
CCTGTCT 212180 1.7688593 5.3334255 1
CCTCCAT 211065 1.7681512 5.8038025 1
TGGGATT 229595 1.7671411 9.370653 2
TGGCATT 227740 1.7590296 5.2390037 2
GGAAACT 227050 1.7584661 5.5998735 1
CAGATTT 243300 1.7533604 5.4714947 3
GTGGAAA 226865 1.7508743 5.5084267 1
GATCTTC 225795 1.7501419 5.8160505 5
CTGCATT 225360 1.74677 5.0922337 1
CTCCTGT 209240 1.7443497 6.6212063 1
GAAGATT 242380 1.7429708 5.356018 2
GGAGAAT 225625 1.7413043 8.693547 1
CAGAGAT 224420 1.7380972 7.4737053 1
GATGCAG 208955 1.7344835 6.151316 5
CCGGGGG 168765 1.7331201 5.7672434 1
GGCTTCA 208105 1.7311536 5.4140115 4
CAGGCAT 207820 1.7311302 5.805892 1
CTGGCAT 207685 1.7276597 7.272682 1
CTGGGGT 194330 1.7265244 10.012021 1
GAGAAAT 239660 1.7257512 5.551622 1
GGAGGAT 208600 1.7254671 6.342556 1
CCCCTCT 191170 1.7224746 6.1332707 1
AAATGTT 257005 1.72203 5.4891725 4
GTGAAAA 238935 1.7205305 5.5248184 1
GGGTCTG 193220 1.7166629 9.278925 4
CCAAGAT 220755 1.7157267 6.5453205 1
CTCTGGT 206345 1.7141851 6.617322 1
CAGGGAC 191580 1.7127216 5.6487336 1
AAATGCA 234670 1.6957633 5.203877 4
AACACAG 217875 1.6956425 5.7021985 5
CCAGGTT 203810 1.6954252 5.7353334 2
TTCAACA 233325 1.6896805 5.2115855 7
AAATCTG 233800 1.6871856 5.9924574 4
CTGAGGT 203045 1.6831404 5.09116 1
CTCTGTT 217045 1.6800389 5.1969757 1
CAAGAAC 215500 1.6771585 5.6054764 1
GGCAGGT 187700 1.6698849 5.2611723 1
CACAGAT 214675 1.6684724 6.4079046 1
TGGAATT 232130 1.6669986 6.681767 2
CTTGGGA 200890 1.6652765 5.2415805 1
GCTGGAT 200845 1.6649035 6.5027995 1
CTGAAAT 230525 1.6635519 8.377291 1
AAGTGAA 230615 1.6606196 5.279268 5
TTTAATT 266080 1.6589292 5.101733 7
GGAAAAC 213760 1.6577852 6.6575265 1
GGGGATG 186815 1.6561854 6.293744 2
CCAGGGT 185345 1.6547338 5.304603 1
GAAATTT 246755 1.653351 5.0154734 3
CTGGACT 198310 1.6496724 6.1618466 1
GATCTTG 213285 1.6473815 5.9465733 5
CTGGATT 212970 1.6449484 6.9611053 1
CAGCAAT 211225 1.6416588 5.738908 1
AGAAATC 226270 1.6350634 6.246125 2
GAAAATT 243375 1.632918 5.0722322 2
GAAAGAT 225915 1.6267757 5.3941526 1
CTCCCTT 193840 1.6216505 5.383327 1
CAGATCC 193860 1.6205248 5.728316 3
CAGGAAT 209140 1.619756 8.324137 1
GAAAATC 223160 1.61259 5.298113 2
AATCCAG 207005 1.6088604 5.7920847 5
CGAGGAG 180450 1.6075646 5.3636518 1
GAAATTG 223375 1.6063043 6.2726536 3
AATGCAG 207355 1.6059318 5.0440044 5
GGATCTG 193440 1.6035199 5.8115196 4
CTCCCCT 176960 1.5944399 5.0768223 1
AATTAAA 254530 1.5933917 5.378799 5
CTGAGAT 205925 1.5926937 7.564333 1
GCTGGTT 191495 1.5852443 5.4463167 1
CCAGATC 188785 1.5781015 6.673322 2
CTTTGAT 217860 1.5678958 5.682458 1
CTCCATT 201305 1.5658079 5.6855807 1
ATCCAGC 186915 1.5624698 5.2302737 6
CTGTGAT 202230 1.5619944 5.1714153 1
AAAGATT 232635 1.5608582 5.3063354 2
CTGGATC 187340 1.5584166 5.1238737 2
CCCAGAT 186425 1.5583736 9.684597 1
AGATCTT 215915 1.5560082 5.012088 4
ACAGGTG 186990 1.5521574 5.4835663 2
CCCTGGT 172835 1.5463744 5.3285336 1
CTCATTT 214095 1.5462197 5.5008283 1
CAGATCT 198550 1.5410551 5.1309657 3
CCGGGAG 160305 1.5359904 8.849458 1
CAGATGT 198390 1.5344157 5.1885414 3
GAATCTG 198290 1.5336423 5.4115224 4
TGGGGTC 172055 1.5286225 5.2078786 2
CAAGAAT 211260 1.5265987 5.4938197 1
AGATGTT 212450 1.5256704 5.064675 4
CCAGAAT 196055 1.5237563 6.668271 1
GATCCAG 182430 1.5196328 5.86295 5
AATCAAA 224965 1.516763 5.162588 5
GATGTTG 196895 1.5154567 5.8004107 5
CCCAGTC 168525 1.515171 5.299456 2
CGGGGAG 158265 1.5111281 8.543 1
ATTCAAA 224135 1.5091178 5.014637 6
GGAGATC 181660 1.5079143 5.491289 2
ATCCAAA 207580 1.5052831 5.087082 6
TGGGTTT 195545 1.503025 6.658196 2
CTGGGTT 181145 1.4995642 8.70101 1
CCCCAGT 166775 1.4994373 7.9816093 1
GTGGGAA 181120 1.4981619 5.422731 1
CTGAATT 207245 1.4935269 5.623113 1
ATTGAAG 207465 1.4918947 5.5129642 6
CCCAGAC 165330 1.488464 6.848873 1
CCTGGTT 177690 1.4761374 6.543883 1
CCCGGAG 152970 1.4708648 5.8517933 1
GATCCTG 175510 1.4600071 5.173916 5
GCGGGAG 152865 1.4595684 5.6509085 1
CTGTAAT 202470 1.4591156 5.0933266 1
CCGCCAC 150545 1.4577496 6.7040033 1
GGAAATT 201625 1.4498988 5.2563496 1
CCAAATC 185425 1.4462085 5.185041 2
GCCAGTT 173210 1.4408741 6.5411563 1
CACAGGT 172265 1.4349589 7.7243953 1
CTCTGAT 184185 1.4276217 5.669257 1
TGGGATG 172390 1.4240167 5.6029644 2
ATTGAAA 210805 1.4143907 5.2748466 6
CGCTGCT 157355 1.4078733 5.6365895 1
AGATCCA 180595 1.4035997 5.9694324 4
GGTTTCA 181665 1.4031534 6.043775 4
AATTTAA 223820 1.3992431 5.8688135 5
CCCAGTT 167425 1.39765 6.5330935 1
GGCAGAT 168070 1.3951073 5.7276077 1
GGGAGAC 156485 1.3940691 5.0279055 1
CCCCACT 154370 1.392789 6.4774356 1
CTCAGGT 166500 1.385056 5.6122346 1
CCCGGCT 143480 1.3825907 6.4114017 1
GAAATCT 191135 1.3792994 5.4789233 3
GGGTTTT 179125 1.3768156 5.660532 3
TGGAATC 177795 1.3751267 5.4080358 2
GGGAGAT 165770 1.3711921 7.2354403 1
GCCACAT 163685 1.3682841 5.083441 1
AATCCAA 188650 1.3680106 5.3502088 5
AAATTGA 203445 1.3650088 6.1052814 4
GGGAAAT 176485 1.362057 8.438594 1
GGAATTT 188830 1.3560477 5.0747952 3
CTCCAAT 173460 1.3510537 5.3453975 1
AATTCAA 199605 1.3439555 5.296537 5
GTGGAAT 172680 1.3308839 6.6448975 1
CCCACTT 158555 1.3282601 5.0242453 1
CTTGGAT 171675 1.3259921 6.213605 1
TTGAACT 183940 1.3255777 5.1829233 7
GTGAAAT 184250 1.324954 6.701762 1
GGTCTGC 148355 1.3226963 5.8605046 5
GAAATGT 183675 1.3208191 5.15194 3
CAGGGAT 159075 1.320442 6.6081843 1
CTCGGGG 137935 1.319856 6.103856 1
CTCAAAT 181490 1.3143046 5.5730586 1
CTCAGAT 168570 1.3083637 6.5725565 1
CCCATTT 165925 1.2906122 5.298339 1
GCTGAAT 166715 1.2894303 5.624668 1
CGGGGCT 134735 1.2892364 5.1778154 1
GGAAATC 165360 1.2806869 5.3216996 2
GGGTTTC 153690 1.272285 5.2530303 3
CCCAAAT 163100 1.2720863 7.5154915 1
CCGGGGA 131775 1.2626251 6.0229807 1
AGGTGTC 152235 1.2619513 5.495299 4
CCTGAAT 162000 1.2573706 5.1822085 1
GCCAGAT 150510 1.2537408 7.150781 1
CTTGAAT 173815 1.2526112 5.2844524 1
GGGGTTT 151665 1.2511203 5.242299 2
CTCCCAT 149245 1.2502675 5.6634817 1
GGGGTCT 140000 1.2438298 5.9146543 3
CCCAAAC 147140 1.2359831 5.42092 1
TGGGATC 147520 1.2228662 5.2408876 2
CAGATTG 157720 1.2198601 5.5159736 3
AGATTGA 168550 1.2120543 6.5936866 4
GGAATCT 156300 1.2088772 5.0733995 3
CCCCATT 143250 1.2000457 5.3087835 1
AATTGAA 178840 1.1999222 5.8553944 5
CACAAAT 163065 1.182479 5.0239134 1
GGGATTT 152675 1.1751052 5.421151 3
CGGGAAG 129235 1.1513084 5.541887 1
CCCGCCT 118785 1.148653 5.2371497 1
GTGGGAT 138685 1.1455986 6.2186522 1
CCCTGAT 136460 1.1391568 5.3600883 1
CCGGGCT 117995 1.1330284 5.334531 1
GCCAAAT 145165 1.1282347 5.1458507 1
CCCACAT 133960 1.1237446 6.178572 1
CCGAGAG 125555 1.1224592 5.2535715 1
CCCCCAT 121270 1.0941472 6.5487995 1
GGGATCT 128960 1.0690132 5.051916 3
CCCCGCT 106400 1.0288899 5.385626 1
GGGATTA 132625 1.022171 5.1631823 3
CGGGGGA 105385 1.0062252 5.557615 1
GGGGAAT 117290 0.9701823 6.685085 1
CTGGTAT 124765 0.96366614 5.775166 1
CCGGGAC 96500 0.92788416 5.484937 1
GGGGGAT 101690 0.90152013 5.3747263 1
CCCGGGT 92465 0.88788056 6.9876103 1
CGGGTCT 98570 0.8788256 5.910573 3
CCCGCTT 92565 0.831103 5.079914 1
CGGGGAA 89720 0.7992834 5.2641706 1
GTCGGGG 81260 0.7748255 5.7053566 1
CCCGTCT 86200 0.77395433 5.539446 1
CGGGGAT 83065 0.7389929 5.228057 1
CCCGGAT 78120 0.69989765 5.7984805 1
CCGGGTT 76055 0.6780875 5.724687 1
AGATCGG 79170 0.6571705 5.9339385 90-94
CCGGGAT 67250 0.6003984 6.405401 1
CGGGGTT 67490 0.5996148 5.787296 1
GATCGGA 58585 0.4862995 5.017691 90-94