FastQCFastQC Report
Thu 28 Nov 2013
HUH7-Mock-3h_R1_clipped.fastq

Summary

[OK] Basic Statistics

Measure Value
Filename HUH7-Mock-3h_R1_clipped.fastq
File type Conventional base calls
Encoding Sanger / Illumina 1.9
Total Sequences 20214335
Filtered Sequences 0
Sequence length 20-100
%GC 47

[OK] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[WARN] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[WARN] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[OK] Overrepresented sequences

No overrepresented sequences

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
AAAAAAA 2429805 15.502349 18.425793 90-94
TTTTTTT 2266785 14.444689 17.525204 90-94
GCTGCTG 608530 6.111715 9.728363 5
CAGCAGC 589390 5.940873 9.018201 9
CTGCTGC 515875 5.198056 7.495889 6
TTTTCTT 735535 5.143599 9.230456 2
GGAGGAG 504675 5.037475 9.721399 1
AAGAAAA 719260 5.018651 6.836556 5
GCAGCAG 490570 4.928706 6.5345774 8
GAGGAGG 492965 4.92059 7.411603 6
TTTCTTT 684075 4.783739 6.2696824 2
AAAGAAA 681160 4.752807 6.7913074 4
GAAGAAG 567115 4.732844 8.426927 1
AAGAAGA 619390 4.7265067 7.4132166 2
CTCCTCC 463150 4.6973085 6.739289 1
CCTCCTC 457640 4.641426 5.202801 10-14
CTTCTTC 550190 4.6334906 6.3864737 5
TCTTCTT 600445 4.607898 8.379575 7
AGAAGAA 594560 4.5370307 5.89352 4
TTCTTCT 586175 4.4983883 7.6904807 6
TTCTTTT 634035 4.433809 6.9692054 2
AGGAGGA 476655 4.3504105 6.7134943 4
AAAAGAA 616655 4.3027225 6.862864 3
TGCTGCT 466045 4.2791595 7.1979656 7
CTCCAGC 420070 4.2472625 7.50285 6
GAAGAAA 552695 4.217563 9.367189 1
GGAGAAG 459180 4.1909165 11.662322 1
TCCTCCT 446250 4.124201 5.3574586 7
AGCAGCA 447735 4.1131835 4.8381753 6
GCTGCAG 405845 4.0767746 7.3886714 5
TTTCTTC 529560 4.063917 6.7764754 5
TTTTTCT 578380 4.044614 4.873644 6
CTGCTGG 398830 4.0056124 5.9342136 8
AGAAAAA 573010 3.9981885 5.158259 6
CTGCAGC 396180 3.9926805 6.151542 6
TTCTTCA 519385 3.9865253 6.53126 6
CTTCTCC 431150 3.9846473 5.851912 6
TGAAGAA 522100 3.9834037 6.982057 8
CCCCCCC 322035 3.9333482 8.079181 90-94
GCTGGAG 387460 3.8794308 7.401896 5
CCTGGGC 346140 3.8150373 5.969781 1
AGGAAGA 456725 3.8115876 5.754266 4
CCAGCAG 374980 3.7796843 5.946276 8
CCGCCGC 311425 3.7790432 6.4701314 2
CTTCCTC 406975 3.7612245 4.927476 8
GCAGCTG 373700 3.7538733 5.785695 8
GGGGGGG 314375 3.7531776 6.903983 90-94
CAGCTGC 371510 3.7440577 6.11902 3
GAGGAAG 408670 3.729914 6.1358094 5
TCTTCCT 439465 3.701007 7.103504 7
GCCTGGG 335185 3.682274 6.3235307 1
GCGGCGG 303615 3.6484234 6.1284547 1
CAGCAGG 361125 3.6281867 4.992251 9
CAGCCTG 359825 3.6262968 5.307763 9
GGAAGAG 396625 3.6199799 11.819462 1
CCTGCTG 358005 3.6073277 4.8988166 8
AAAAAGA 514230 3.58805 7.593314 2
TTTTAAA 561245 3.5782995 6.537534 6
TCTTTTT 510880 3.5725853 4.8769083 7
GAGGCTG 356025 3.564689 5.408182 5
GGAGCTG 355275 3.5571795 7.052736 4
TTTAAAA 553810 3.53151 7.55331 7
ATTTTTT 554070 3.5313272 5.8602843 1
CACACAC 380960 3.5226324 7.938578 1
CAGGCTG 349265 3.50842 4.8465796 2
GAAGATG 420305 3.5070357 9.934499 2
AAAAAAT 547000 3.4892974 5.6071353 1
TTTGTTT 499535 3.481884 5.5747366 2
TGGAGAA 416580 3.4759545 4.18479 7
CAGGAGG 347045 3.4753804 6.123086 1
CCAGGAG 345895 3.4751713 6.9284897 1
CTTCTTT 451780 3.4670224 7.259813 1
CAGCCTC 342570 3.4636722 5.7482686 8
TTTTTAA 542525 3.4583466 6.394042 5
AGCTGCT 376115 3.4540353 5.690999 6
GCCGCCG 285490 3.4530575 4.9575615 7
CAGCTCC 341475 3.4526012 6.8916698 3
GAAGAGG 377750 3.4477086 6.603232 2
CTCCAGG 341950 3.4461532 7.310995 1
TTCTCCA 408870 3.4439454 6.0505877 7
CCTCTTC 372360 3.4413157 6.376788 3
AAAGAAG 450070 3.4344418 5.605945 4
AAACAAA 489990 3.430076 6.8295627 5
GAAAAAA 490895 3.4252295 8.230713 1
CATCTTC 405735 3.4175396 5.95652 5
TTAAAAA 535760 3.4170034 7.323177 7
CCTGGCC 308920 3.415926 6.5243926 1
CCTGGAG 339765 3.412991 9.175616 1
CCCAGCC 307400 3.4108078 9.809919 1
AGCAGCT 370970 3.407378 4.8074217 6
AGGAGAA 407040 3.3969426 4.6049657 4
GTGTGTG 372255 3.3957856 5.512988 6
GAAGCTG 370300 3.3901567 6.5808983 4
GCCCAGG 307340 3.3879855 4.8525724 1
CAGCTTC 367340 3.384463 6.944419 3
GGAAGAA 404845 3.3786242 8.318193 1
AAAACAA 481515 3.3707488 6.7874227 4
CCTCCTG 333105 3.3673882 3.8530753 20-24
TCCTTCT 398940 3.3597207 4.940945 3
CTTTTCT 437470 3.3572054 8.834618 1
GGCCAGG 304285 3.3433943 4.345144 6
CCAGCCT 330540 3.3420384 5.3776445 1
AGAAGGA 399025 3.3300536 5.490237 4
TCTTCAT 433455 3.3269715 6.031342 7
CTCCTTC 359125 3.318999 6.0852213 1
TTTTTTC 472220 3.3022363 4.8381 2
TTGTTTT 473415 3.2998207 4.682908 2
GGTGGAG 330335 3.296706 8.970378 5
TTCTCCT 391325 3.2955902 6.229769 7
CCACCAC 324760 3.2948897 5.3772535 1
CTTTTTT 470575 3.2907324 8.05699 1
CTGGAGG 328445 3.288545 8.39565 1
ACACACA 390025 3.2869258 6.097032 4
GTGGTGG 329100 3.2838106 4.711882 6
TCTTCAG 390835 3.2813232 6.194953 7
CCCAGGC 296400 3.2780542 8.7693205 1
GCCCAGC 296105 3.2747917 4.512484 6
TCTCCAG 354705 3.2680514 4.826576 7
CTGAAGA 390320 3.2674718 4.927652 1
CGGCGGC 270595 3.26225 5.6764665 2
AAAAAAG 467380 3.2611535 5.385767 2
TTCTTCC 386390 3.2540295 6.022095 6
GGCTGGG 297080 3.2530406 4.1974 90-94
CTGGCTG 323645 3.2504985 5.602739 2
CTCCTGG 322510 3.2496731 6.1422324 1
TGTGTGT 389535 3.2485962 4.446438 8
GGAGCAG 324035 3.2449534 6.266564 4
CCAGCTG 320960 3.2346168 5.908028 2
AGAGGAA 387350 3.23262 5.9678183 4
AGGAAAA 423570 3.2322226 3.9769242 40-44
CTCCTGC 319595 3.230814 6.289293 1
CGCCGCC 266185 3.23007 4.8779263 9
CCTGCAG 320345 3.228419 4.8902907 8
CTGCAGG 320705 3.2215304 5.165082 1
CTGGAGA 351785 3.2206492 8.281725 1
TCTTCTG 383360 3.2180066 5.9126916 7
GGTGGTG 321940 3.212367 4.382496 3
ATGAAGA 420095 3.2051482 6.04496 6
GAGGCAG 320055 3.205097 7.165572 5
CAGCTGG 318755 3.2019427 5.1643057 9
CAGCCAG 317515 3.200455 4.187859 9
AGAAAAG 418795 3.195785 5.9540057 2
GAAGGAG 349940 3.1938882 5.1846533 5
CTCTTCT 379165 3.1931832 6.0428023 1
TTTCTCT 414735 3.1827343 5.6304035 6
CTGCCTC 314515 3.1794598 5.1734834 8
GCTGAGG 317390 3.1778572 4.5417566 6
TCTTTCT 413805 3.175597 4.1060743 3
AGAAAGA 415885 3.1735792 4.9527955 2
AAGGAAA 415375 3.1696873 4.157295 5
CTGCTCC 313545 3.1696541 4.9620805 3
TTTTCCT 412845 3.16823 4.7092714 7
CCTCCAG 313220 3.166919 4.087758 5
TTTTGTT 454045 3.164807 5.376654 7
CTCTTCC 342330 3.1637812 4.811381 6
GAGAAGA 378945 3.1624763 6.3135223 2
AGCCTGG 314760 3.1618123 3.7092388 55-59
CACCACC 311580 3.1611707 5.400047 9
AGAAGAG 378755 3.1608903 4.4536266 3
GCAGGAG 315390 3.1583803 5.1072307 1
GGGGAGG 288040 3.1443357 8.507285 2
AACAAAA 448600 3.1403337 5.425871 5
CTGGAAG 342460 3.135277 10.616284 1
CAGGAAG 342050 3.1320677 10.157954 1
TCCTGCT 339940 3.1314707 6.6686034 7
GCCCTGG 283080 3.1200116 3.5994124 55-59
AAAGGAA 408700 3.1187508 5.016446 5
GAGGTGG 311955 3.1132755 5.6601596 3
TTTCCTT 405570 3.1124008 5.4733233 7
TTCCTTT 405045 3.1083715 4.634285 8
AAAAACA 443995 3.1080976 5.9993787 2
CTGGGCC 281885 3.1068408 5.687704 1
CTGGGCA 308915 3.1030984 7.8294234 1
GAGCTGG 309655 3.1004107 6.2701693 9
CTGCTTC 336430 3.099137 5.8160114 3
GGAGGCC 281670 3.0949073 4.304372 4
AGAGAAA 405305 3.092844 4.555052 4
CCAGGCT 306850 3.0924172 7.1843777 1
TCTCTTC 366890 3.0898077 4.505808 7
GAAGAGA 369985 3.0877008 5.6067204 4
CCTCAGC 304985 3.0836558 4.224956 1
GCTGGGC 280620 3.082834 3.8946145 5
CTTCCTG 334455 3.0809436 3.9857259 8
TGTTTTT 440900 3.073183 4.3552938 9
AGGCTGG 306375 3.0675697 3.805945 3
GGCCCAG 277955 3.064058 3.984937 5
CCAGCTC 303045 3.0640407 7.540862 2
CAAAAAA 437650 3.0636804 5.5083117 1
GATGATG 367120 3.0627263 6.3656693 2
GGGCAGG 279485 3.0609064 4.63672 5
TCTTCTC 362915 3.0563319 5.3286076 7
GGGAGGC 279010 3.0557044 6.9350405 3
TTCCTCT 360860 3.0390255 3.7456903 8
GGGGCTG 277465 3.0382557 5.848683 2
CTTCATC 360615 3.0374897 5.611671 6
CCACCTC 299400 3.037069 5.167936 2
CTTTCTT 395700 3.0366566 5.595734 1
GAAAGAA 397735 3.035078 6.0187206 1
ACAGCAG 330325 3.0345793 3.942592 20-24
CCTCTCC 299135 3.0338538 4.5347166 3
GGCTGAG 302680 3.0305736 4.9339585 1
CATCATC 359470 3.028372 4.323298 9
CTTCCAG 328475 3.026383 4.895146 5
CCAGCCC 272565 3.02429 6.3136415 2
TGGAAGA 362430 3.024125 5.7533913 2
CTTCTGC 327990 3.0213892 4.9157257 6
CCTCCCC 270870 3.0147707 3.9619887 1
TCTCCTT 357860 3.0137606 5.1287847 7
CCAGGGC 273380 3.0136247 5.8982124 2
CCAGGCC 272370 3.0122926 4.5433583 8
AAAAATA 471325 3.0065682 5.9684663 2
CAGAAGA 358955 3.0054295 4.624616 1
TTCTCTT 390990 3.0005114 5.330509 7
GGCCTCC 271160 2.9983897 5.0314646 9
CAGAAAA 391460 2.9969459 9.2196455 1
CCCCGCC 245830 2.9928071 8.185969 1
CTGCTGT 324935 2.9835072 7.95125 1
CCCAGGA 295450 2.9780464 8.93982 1
GATGAAG 356895 2.977941 7.678561 5
GAAGCAG 324975 2.975716 5.610712 4
GGCTGCT 296255 2.9754097 5.275525 4
TATTTTT 466670 2.9742894 5.168492 9
CTCCTCT 320790 2.964711 8.355891 1
TCTTCCA 351305 2.9590707 5.8938365 7
GGGCTGG 270220 2.9589224 5.0793786 3
CCCAGCT 291595 2.9482718 11.555115 1
GGCGGGG 245795 2.9440122 5.4341245 1
CTGGTGG 293165 2.934795 6.130275 1
CTCAGCC 289930 2.931437 5.0059614 1
TGGGAGG 293580 2.929895 6.3288026 2
GCTCCAG 289145 2.9139874 6.7001133 5
CCTGGCT 288605 2.9080398 10.188603 1
TCCTCTT 344860 2.9042795 5.8304033 2
TAAAAAA 455045 2.902719 5.4311876 9
AAGAGAA 379935 2.899248 5.442471 5
TTCTGCT 344930 2.895417 5.420618 7
CAAGAAG 345365 2.8916442 7.266141 1
GTGGAGG 289530 2.8894765 7.141018 6
GGCAGGG 263745 2.8885226 6.268377 1
CTGGAGC 287270 2.8856711 5.3286824 1
TTTATTT 451125 2.8752139 5.4146967 2
CCAGAAG 312425 2.8701377 6.5746365 1
GGGAAGA 314440 2.8698807 6.157355 2
GGAGAGG 287500 2.8697162 5.1828113 2
CTTCTCT 340225 2.8652453 5.329579 1
CCCAGCA 282530 2.8571134 5.1009445 1
TCCAGCT 310020 2.8563488 6.669762 7
CCCCAGC 256370 2.8445957 5.8136673 1
AAGATGA 372470 2.84179 5.956511 3
CTTCAGC 308240 2.839949 5.636707 6
TCCTGGG 282315 2.8354046 5.2566957 7
GAAAAGA 371540 2.8351867 6.465262 2
TGCTGGA 309025 2.8286824 5.1190357 9
TGCTGGG 282160 2.824627 5.3839707 7
GAGAGAG 309300 2.8229682 5.5965376 5
TCAGCAG 307120 2.8209126 5.290303 8
TCCAGCA 305525 2.8154235 5.9120827 7
GGAGGTG 281640 2.8107355 5.5996847 4
AAATAAA 440435 2.809522 5.2085686 4
TCTGCTG 305415 2.8042777 5.4721627 7
TCCAGGA 305005 2.8014863 5.8885717 7
CACCTCC 276065 2.8003623 5.4179864 9
GGCAGAG 279530 2.799271 5.6244783 1
AGAGAGA 335040 2.7960682 5.2844505 4
TCATCTT 363560 2.7904944 5.0207524 8
CAGGGCC 252500 2.7834527 5.067325 3
CTGGGGC 253190 2.7814937 6.8142824 1
CCCCAGG 251070 2.776724 5.7535796 1
CCTGGGG 252730 2.7764401 6.635362 1
TCCAGCC 274170 2.7720902 5.7529836 7
TGAAGAT 363180 2.7704294 5.590674 1
TGGTGGA 302845 2.7630937 5.599034 9
GGAAAAG 328850 2.7444093 11.238491 1
CTGGGAG 274085 2.7442672 10.939504 1
CCCCTCC 246305 2.7413635 5.396591 1
ATCTTCA 356770 2.7388546 5.950231 6
CTTCCTT 324585 2.7335312 6.0780716 1
CCCGGCG 225595 2.7286158 5.054145 1
GCCAGGC 246665 2.7191303 6.07341 1
AAAAATT 425965 2.7167463 6.255267 2
AGAAAAT 389035 2.714028 6.2458153 1
CTGCTTT 323220 2.7131784 7.3941655 1
TTTTCAA 387525 2.7109058 5.835431 5
GGGAGGG 248235 2.7098117 6.5019627 1
GAAAAAG 355015 2.709086 8.4404125 1
GGAAAAA 354520 2.7053084 8.369395 1
CCAGAGG 269150 2.7041225 6.3011813 2
CTGAGGA 293430 2.6863997 5.159037 1
TGAAAAA 384750 2.6841342 5.1898217 8
GAGCAGC 266845 2.6809647 5.3332953 5
TTGAAGA 349845 2.6687064 6.2639613 7
AGAAGAT 349705 2.668102 6.670921 1
AAGAAAT 382320 2.667182 5.606301 1
CTGGGCT 264380 2.655276 10.309676 1
GGGAGGA 265815 2.6532645 5.7826757 1
CCTGAAG 286255 2.6292665 5.376759 1
TCCTTTT 342605 2.6291983 5.234361 2
GGCTGCA 260900 2.6207805 5.220359 4
CCAGCAC 258765 2.6167872 5.336228 1
CCTGCCT 258560 2.6138058 6.5291986 1
TCTGCTT 311275 2.6129098 5.4130683 2
GAAGCCA 284320 2.6119475 6.317163 4
GAGCTGC 259770 2.6094294 6.1315227 5
CATTTTC 339910 2.6089702 5.0031395 3
AAAGAGA 340700 2.5998495 5.1550555 4
CCCCACC 233005 2.5937855 6.5837417 1
CCGGCGC 214215 2.5909724 5.1378784 2
CCATCTC 279965 2.5878594 6.3607044 2
ATCTTCT 336200 2.5804944 5.9349136 6
AAATGAA 368775 2.5726876 6.7315073 5
CCCTGCC 231540 2.5686443 5.513249 1
GGCAGCT 255660 2.5681438 5.454888 1
GCCAGAG 255060 2.5625618 9.747572 1
TCTCCTG 278165 2.5624096 5.1428823 7
GTGCTGG 255835 2.5610948 5.2628655 6
GCTTCTG 278510 2.5572398 5.386711 5
TTCATTT 365440 2.555967 6.7065077 7
AAAAATG 365445 2.5494568 5.1349025 2
GAAAATG 333920 2.5476696 6.687775 2
CCGGGCC 210445 2.5453737 5.273646 1
AGAAGCA 303865 2.5441763 5.4263563 4
TTTCTTG 331860 2.538453 5.263327 5
TTTTATT 396790 2.528914 5.708265 2
CTGGAAA 301265 2.5219688 7.966046 1
GAGATGG 275965 2.5182836 6.07136 3
TTCAGCA 299555 2.515403 5.8092656 7
GAAGAGC 274500 2.513529 5.8792334 2
GGCTGGA 250735 2.5104759 5.3058558 4
CAGCTTT 298005 2.5019531 6.6171103 3
CTCTGCT 271460 2.5006442 7.3770947 1
GGGAAGG 250365 2.4990485 6.283461 2
GAGAAGC 271395 2.4850974 5.7045608 2
GGGAGAG 248735 2.4827788 8.727428 1
TTTCAAA 354645 2.481327 5.605334 6
CCTCCTT 268275 2.4793725 5.655171 1
AAAATGA 354405 2.472438 6.452568 4
GCCAGGA 245860 2.4701304 7.2978234 1
TTTGAAA 353960 2.4684758 5.7558103 6
AATAAAA 385700 2.4603689 5.3983526 5
CAGCTCT 266890 2.4589736 5.3626347 3
TGCAGTG 268545 2.458146 5.7619257 7
GAAAAGG 294065 2.4541123 5.758274 2
GTTTTTT 351865 2.452587 7.4307365 1
CAAGAAA 319830 2.4485598 5.447001 1
CAGAAAG 291905 2.4440386 7.2583485 1
CTCCATC 264350 2.443522 5.2819433 1
GGAGATG 267215 2.4384365 7.226205 2
CCCAGAG 241710 2.4363635 7.401383 1
GATGGAG 266830 2.4349234 9.318868 5
TTGAAAA 348445 2.430437 6.1008058 7
TCATTTT 347185 2.4282877 5.0244274 2
GAAAACA 317080 2.4275067 5.3109145 2
GGGGAAG 243015 2.4256837 10.53887 1
TTCATCT 315755 2.423569 5.7706637 7
CAGCAGT 263720 2.4222817 5.363938 1
CAGGGAG 241800 2.421435 7.027103 1
CCTGGAA 263400 2.419342 5.2784557 1
TTTGAAG 317120 2.4186516 5.7980227 6
CCAGAGC 239865 2.4177663 5.125871 2
CAGAGAA 287940 2.4108407 5.131103 1
AGAAAAC 314250 2.4058404 5.959194 2
CTGGCAG 239390 2.4047089 6.3990927 1
CCAGGCA 238475 2.4037554 5.9325037 2
AGATGAA 314855 2.4022114 5.690164 4
TCTGCCT 260760 2.4020777 5.2800255 7
TGCAGCT 261525 2.401703 5.0373154 7
CCCAGGG 217825 2.40121 7.401968 1
TTCATCA 312675 2.4003456 6.025248 7
TCCAGGC 238135 2.3999116 5.0403385 7
CAGGAAA 286090 2.3953514 6.728485 1
CAGGATG 261610 2.395082 5.5118885 2
GGCTTCT 259590 2.383519 5.365509 4
CTGAAAA 311360 2.3833008 5.2608385 1
GCCAGCT 236260 2.3810155 7.184378 1
CTGGGGG 216955 2.375668 8.942349 1
GGGAAAG 260000 2.373009 8.409103 1
AAAATTT 371995 2.3721209 5.0525856 3
AAAGATG 310350 2.3678405 5.711463 4
AAGCCAG 257460 2.365194 5.2527514 5
CCCTCCT 233105 2.364172 5.6774263 1
CCCAAAG 256370 2.362869 5.420982 1
GATGCTG 258035 2.3619423 6.307012 5
CTGGGGA 235270 2.355633 9.290192 1
TGGCTTT 281360 2.354112 5.605667 2
AGATGGA 281075 2.3452969 8.598842 4
TTCCAGC 254220 2.3422391 5.1952004 6
CCTTTTC 277195 2.3344307 5.04282 3
GTTTTCT 304100 2.3261123 6.1470256 1
GCCAGGG 211080 2.319285 7.6233015 1
CTCCTTT 275035 2.31624 7.676945 1
CCAGCTT 251225 2.3146446 5.9070516 2
CTGGATG 252785 2.313886 6.2860394 2
AAAGCCA 275330 2.3127863 5.0532546 4
CTCCAGA 250620 2.309472 5.1413193 1
CCCAGAA 250510 2.3088596 5.897033 1
CCAGGTC 228870 2.3065393 6.6629434 2
TTTCCAA 300430 2.306343 5.060908 5
TTTGCTG 274985 2.3007727 5.5431156 7
CTGGCCT 227880 2.296163 5.420169 1
GGGCTCC 208060 2.2931666 5.4456472 5
TGGTTTT 300760 2.2930782 6.0126867 2
CTTCATT 298390 2.290284 5.025249 1
TGGGAAG 250885 2.2894192 5.3750734 2
CCCGGCC 188365 2.2857492 7.041307 1
CCAGGTG 227225 2.2825098 6.094445 2
TCCATTT 297290 2.2818408 5.3742867 7
CTGGCTT 247845 2.275678 7.408634 1
CTCAGCT 246955 2.2753036 7.0353956 1
AAAACCA 295975 2.2733276 6.1786356 4
AATGAAG 297805 2.272127 5.4344273 5
GAAAAAT 325395 2.2700558 8.057231 1
GCCGGGG 188755 2.2681956 5.860055 1
CTTGGCT 246785 2.2659452 6.507122 1
AGCCACC 223950 2.2647176 5.024726 6
CTGATGA 270455 2.2636573 5.4515758 8
GAAGACA 270165 2.2620158 5.76149 2
AACAGAA 295410 2.2616048 5.1824183 5
CCCTTCT 244585 2.2604315 5.715378 1
GTGGAGA 247600 2.2594423 5.2781315 1
GGGGGAG 206810 2.2576036 6.6797514 1
CTCAGGA 245700 2.2567668 6.8555818 1
CCCGGGG 186910 2.253357 9.766853 1
AAAATCA 321840 2.2525845 5.2656307 3
AGGTGGA 246450 2.248948 5.1414475 4
GGAAAGG 245490 2.240577 5.5041404 1
CTGGGAA 243885 2.2328072 8.533073 1
AAGAAAC 291535 2.2319386 7.202326 2
AAGATGG 267395 2.2311509 5.7880363 5
GGAGGCA 222780 2.2309651 5.3114376 4
CTGGAGT 243715 2.2308629 8.753079 1
TTCAAAA 318530 2.2290301 5.1407557 7
CAGAGAG 243340 2.2282045 5.6584578 1
TTCACCA 263955 2.2237012 6.4200683 7
AATGAAA 318350 2.2209074 5.173591 6
CAGAAAT 290070 2.2203367 10.6142845 1
AAACAGA 289115 2.2134113 5.1896935 4
TTTTGAA 317185 2.211627 5.2552357 5
TCAGCTT 263420 2.2115884 5.941346 2
CAAAAAG 288600 2.2094686 6.1630554 1
TTCAGCT 263115 2.2090278 5.378594 7
CTCTTTT 287460 2.206008 5.1814995 1
CTGCAGT 240160 2.2054982 6.418513 1
GAGCCAG 219450 2.2047918 5.595052 5
CTGGGTG 220215 2.2045124 5.4688015 1
CCTGGGT 217495 2.1843908 8.089777 1
AGAAATG 286160 2.183281 5.317562 2
CCACCAT 235980 2.1816628 5.936766 1
CCAGGAT 236835 2.1753411 9.00543 1
CATCCAG 235375 2.168989 5.1146445 5
CCTGCTT 235380 2.1682813 5.9068193 1
AGAAATT 310225 2.163849 7.129849 2
CCAGGAC 214605 2.1631532 6.134986 1
TTTGCCA 256755 2.1556315 6.077773 7
GACAGAG 234670 2.1488154 5.0695157 5
AGGATGA 257350 2.147335 5.073899 4
CACAGCT 233010 2.1471953 5.09844 1
TGGAGGT 234775 2.1420374 5.4587774 7
TTCATCC 253470 2.1349988 5.274671 7
CAGTTTT 279030 2.1347184 6.837702 9
GCTTCAG 232250 2.1328576 5.2252917 5
AAAATAT 334315 2.1322153 5.6172676 3
CTTGGAG 232435 2.1276104 6.2655864 1
CCGGGGC 176265 2.1250226 6.7422056 2
AAATGGA 278220 2.1227016 5.62272 4
AAAATGT 303590 2.1175692 5.591583 3
CAGAAAC 251725 2.1145031 9.193434 1
CTCCAGT 229330 2.1129167 7.7084956 1
CCCAGGT 209430 2.110624 10.016861 1
AGAAACT 275535 2.1090791 6.0258255 2
CTGAGAA 251685 2.1069217 5.6132383 1
TTGGTTT 275980 2.1041481 5.3635287 2
TGAATTT 301475 2.1020863 5.1419587 2
TGGAATG 251225 2.0958636 6.4161286 2
CTGGAAT 249805 2.0908206 11.948941 1
GTGGAAG 227190 2.0731936 6.645435 1
CCCACCT 203805 2.0673676 6.4902887 1
CTCAGGG 205755 2.0668402 6.6795497 1
CTGGGAT 225750 2.066419 14.315865 1
GGAAGAC 225345 2.0634289 6.9409842 1
CTTTGCT 245065 2.0571284 5.3356733 1
CACAGAG 223660 2.0546856 5.048535 1
GGGGAGA 204615 2.0423894 5.1177936 2
CAAAAAT 291295 2.0387974 6.5625787 1
TCTGCCC 201655 2.0385482 5.507419 7
GGAAGAT 244165 2.037319 9.400022 1
AATGGAA 266725 2.0349996 5.58706 5
CTGCCAT 220605 2.0325296 6.3751574 1
AAATTCA 290360 2.0319004 6.81111 4
CATTCCA 241090 2.031074 5.428589 4
CTTCCAT 241110 2.0308895 5.0483027 1
GGGAGAA 221625 2.0227623 5.69101 1
TCACCAT 239865 2.0207539 5.0443296 8
GAAACTG 241050 2.0178933 5.7448997 3
CCGGGGG 167830 2.016748 6.285021 1
CCCTGCT 199230 2.0140336 7.3382926 1
TCTGGTG 219900 2.0125208 5.833309 7
CAGGGAA 219375 2.0087628 5.436891 1
ATTAAAA 314335 2.0047855 5.8751445 6
ATTTAAA 311665 1.9874113 5.2273765 6
GGGCTTC 197255 1.9811124 5.5700192 3
CTGGGAC 197155 1.9804522 7.936932 1
TTTCATC 257710 1.9780462 5.149305 6
CTCAGAA 234025 1.9654807 5.447882 1
CCATCCA 212445 1.9640789 5.1099834 4
CTGGCAC 194875 1.9639397 5.088153 1
TCTTGAA 256330 1.9613925 5.2580357 5
CCTGGAC 194395 1.959102 6.166747 1
GAAGAAT 256600 1.95775 6.2129383 1
GTGGGAG 195940 1.9554591 6.5897126 1
TTCAAGA 255015 1.9516698 5.3586617 7
GGGAAAA 233800 1.951172 5.1532407 1
AAACTGA 254380 1.9471484 6.0399394 4
CAGTTTC 231175 1.9408702 5.1093154 3
CTCGGCC 175400 1.93951 5.2997828 1
CCCATCT 209820 1.9394736 7.7250576 1
GCCAGGT 192595 1.9346462 8.787651 1
GGAAACT 231020 1.9339294 6.400104 1
CTTGGAA 230970 1.933175 5.3162656 1
ATCCAGG 210165 1.9303763 5.5766096 6
TTCAGTT 252160 1.9291493 5.7554445 7
CGGGGGC 160135 1.92428 5.8424854 3
CCCCCAC 172825 1.9238685 5.293929 1
TGGAAGT 230580 1.9236312 5.5272646 2
CCAGTTT 228960 1.9222734 5.7265043 2
GTTCTTT 251125 1.9208976 5.3959994 1
CCAAAAT 250040 1.9201758 6.8110304 1
CCTGGAT 208540 1.9151175 9.862801 1
CTGGTCT 208305 1.9126272 6.468669 1
GGGAGGT 191450 1.9106492 5.9526863 3
TGGGATT 228605 1.9068232 9.659389 2
ACCTCCC 187945 1.9064862 5.2573423 6
CAGCAAC 206850 1.9064614 5.004974 1
CAGCCAT 206635 1.9041488 5.059848 1
CAGGAGT 207690 1.9014359 5.2229395 1
CCAGCAT 205885 1.8972373 6.2176085 1
CAGGAAC 206330 1.8954809 6.690057 1
TCCAGTT 224065 1.8811766 5.3983827 2
CCAGAAC 203630 1.8767835 7.080728 1
CCAGATG 204315 1.8766435 6.064067 2
AAATCAA 267435 1.8717993 5.8874893 4
CTTGGGG 186920 1.8712051 5.729664 1
TGGATTT 245165 1.8695313 5.2864075 2
CAGGTTC 203510 1.8689249 5.9860945 3
AAAATCT 266620 1.8657709 5.603325 3
GGGGGTG 170890 1.8651651 5.0628595 2
GGAAATG 223245 1.862762 5.9164424 2
GGGGAAA 203865 1.8606675 5.7504683 1
CAGAGAC 201485 1.8509716 5.984715 1
TGAAATT 264310 1.8432672 6.2298274 2
AACTGAA 240635 1.8419373 5.384505 5
CTGGAAC 200520 1.8417863 7.6078153 1
GGAAAAT 240875 1.8377749 9.823544 1
CTGAAAG 219305 1.8358601 5.2003284 1
CCCTCTT 198390 1.8335018 5.194319 2
AAATCCA 238740 1.8333977 6.4848323 4
AATTTCA 262030 1.8333321 5.3808837 4
CCCCTCT 180710 1.8327771 6.3334217 1
TGGGCTT 199475 1.8255917 6.5915294 2
GAAAAAC 238235 1.8238834 6.013432 1
CTCCACT 197165 1.822497 5.8798184 1
TGGAGTT 217910 1.8176149 5.4484262 7
GGGTCTG 181275 1.8146946 10.977814 4
CTCTGGT 197350 1.8120399 7.511175 1
CAGGTGT 197845 1.8109885 8.445253 3
GCCAGAA 197030 1.8100449 6.7841015 1
AGAAACC 214195 1.7992495 5.8193817 2
CTCAGAG 195245 1.7933351 5.201523 1
CCTGTCT 194515 1.7918397 5.6410556 1
CAAAAAC 232725 1.7875164 5.3325415 1
TCTGATG 212990 1.7823763 6.0696764 7
AAGAATT 255475 1.7819626 5.5980835 2
CAGGCAT 193135 1.7739546 6.364065 1
CGGGGGG 147650 1.7684793 5.3616695 1
GAAATGA 231730 1.7680027 5.1364117 4
GGATTTT 231710 1.7669287 5.00956 4
CTGGGGT 176195 1.7638401 10.741956 1
GTGGAAA 211305 1.7631344 5.9405336 1
CAGATTT 229875 1.7589637 5.293896 3
GGGGGCT 160515 1.7576474 5.064784 1
CGGGAGG 160395 1.7566384 5.493748 1
GGTTTCT 209815 1.7555016 5.0683465 4
AAATGTT 251660 1.7550476 5.068114 4
ATTTGAA 251575 1.754455 5.2204595 5
CTGGTTT 209625 1.753912 8.078695 1
CCACATC 189690 1.7537063 5.1057935 2
TGGCATT 209485 1.7530452 5.178356 2
GCAGTTT 209210 1.7507436 5.680333 8
CTGGCAT 190130 1.7460501 7.9227185 1
GGAGAAT 209110 1.7448192 8.56524 1
AGAACCA 207670 1.7444389 5.5144176 4
AACACAG 207545 1.7433889 5.842533 5
TTCAAAT 249110 1.7429355 5.0064025 7
GGCTTCA 189710 1.7421932 5.212626 4
CCTCCAT 188210 1.7397213 5.7421784 1
CTGGTGT 189915 1.7380987 6.8734865 1
GTGAAAA 227680 1.7371027 5.1549644 1
GGCAGGT 173490 1.737063 5.6980467 1
CTCCTGT 188185 1.7335289 6.4854994 1
CTGAGAG 189170 1.7318821 5.048273 1
CCAGGTT 188350 1.7297035 5.914262 1
CTTGGGA 188515 1.7255856 5.5329685 1
CAGGGAC 170870 1.7167134 5.7410164 1
GGAAGTG 187650 1.7123762 5.400539 3
TTTAATT 268520 1.711691 5.4183435 7
CTGAGGT 186890 1.7107111 5.0346184 1
CCAAGAT 202960 1.7045782 6.389732 1
AAATCTG 222535 1.7030953 5.928509 4
GAAGATC 203255 1.7015015 5.639749 2
CACAGAT 202425 1.7000852 6.6593914 1
CAAAGAT 221345 1.6942822 5.873475 1
GGAGGAT 185010 1.6882855 5.8683653 1
GAGAAAT 221245 1.6880063 5.225969 1
CAGAGAT 200575 1.6790664 7.3233094 1
CTGAAAT 218890 1.6751994 8.233544 1
GATGCAG 182160 1.6677046 5.9332848 5
GAAAATC 217330 1.6635497 5.7907753 2
AAGTGAA 217965 1.6629814 5.168208 5
TGGAATT 217855 1.6615646 6.8486834 2
GGAAAAC 197990 1.6577147 6.3310876 1
GAAGATT 216630 1.6525087 5.3379326 2
GGGGATG 165235 1.6490265 6.690979 2
CTCCGGG 149245 1.6449277 5.0466194 1
AATTAAA 257895 1.6448188 5.243118 5
CTCCCTT 177870 1.643858 5.4573474 1
CTGGACT 178430 1.6386038 6.273221 1
CGGGGAG 149465 1.6369336 9.351603 1
GGTGTTG 179425 1.6367512 5.6063538 5
GATCTTC 194930 1.6365689 5.1090636 5
AGAAATC 213765 1.6362615 5.883371 2
CCAGGGT 162390 1.6312323 5.1697564 1
CAAGAAC 193725 1.6273001 5.394107 1
GATCTTG 194215 1.6252604 6.050192 5
GCTGGAT 176290 1.6136833 6.5381885 1
CAGATCC 174665 1.609544 5.637961 3
CTTGAAC 191110 1.6047763 5.3482623 6
CTGAGAT 191655 1.6041161 6.9637246 1
CAGCAAT 190150 1.5969926 5.6901846 1
ACAGGTG 174335 1.5960653 5.7674627 2
CTGGATT 190505 1.5942138 6.7288733 1
CCGCCAC 143175 1.5886221 8.193864 1
GCTGGTT 173425 1.5871825 5.306298 1
GGATCTG 171850 1.5730414 5.889839 4
CCCCAGT 155400 1.5712252 8.468732 1
AATCCAG 186730 1.5682693 5.54065 5
TGGGGTC 156415 1.5658281 5.8639665 2
CCCGGAG 141730 1.5623713 6.535071 1
CAGGAAT 186535 1.5615339 8.110176 1
GTGGGAA 170835 1.5589333 5.481953 1
GTCAGGA 169865 1.5551418 5.0482736 1
CTCCATT 183860 1.5486678 5.7734075 1
CTCATTT 201365 1.5455713 5.2252593 1
CCCGGCT 139690 1.5446416 7.0183535 1
CTTTGAT 201665 1.5428374 5.5250955 1
CCAGATC 167305 1.5417213 6.7312655 2
GAAATTG 201610 1.5379324 5.9732213 3
TGGGTTT 184240 1.5365021 6.8833985 2
CCCAGAT 166375 1.5331515 10.106832 1
GCCAGTT 166925 1.532948 6.461246 1
ATTCAAA 219015 1.5326377 5.163533 6
CAAGAAT 200070 1.531433 5.3035808 1
CTGGGTT 166885 1.5273285 8.581212 1
CAGATCT 181735 1.5260532 5.196154 3
CAGATTC 181215 1.5216867 5.012531 3
CTGAATT 198605 1.5196911 6.284464 1
GACTGGG 151680 1.5186911 5.0588164 5
CCGGGAG 138130 1.5177318 9.162278 1
CCCAGTC 149940 1.5160199 5.41926 2
CGAGGAG 151080 1.5129462 5.13519 1
CCCTGGT 149830 1.5097162 5.41548 1
AAAGATT 216100 1.5073181 5.2703114 2
GCGGGAG 136915 1.4994866 5.534518 1
CCAGAAT 178265 1.497175 6.514791 1
CAGATGT 178690 1.4956015 5.187035 3
GAATCTG 177800 1.4881524 5.155779 4
TGGGGTT 163105 1.4878769 5.0379114 2
GATCCAG 161505 1.4834317 5.6065197 5
CCCAGAC 146215 1.478614 6.959684 1
GGTTTCA 176175 1.474295 6.3813076 4
GGGTTTT 176185 1.469326 5.6300983 3
AATTTAA 228140 1.4547926 6.2924285 5
CCTGGTT 158180 1.4523864 6.584028 1
AGTTTTA 207375 1.445958 5.0250607 4
GGAATCC 157270 1.444533 5.6409836 3
ATGGAGT 171910 1.4341723 5.1970744 6
CTCTGAT 169915 1.4265511 5.4498963 1
GAAACCT 168720 1.4170105 5.4197884 3
CCCCACT 139570 1.4157773 6.849025 1
CACAGGT 153915 1.413717 7.642008 1
GGAAATT 185005 1.4112651 5.118572 1
CCCAAGT 153000 1.4099004 5.1070156 1
TGGGATG 154450 1.409169 5.127931 2
GCCACAT 152805 1.4081035 5.274248 1
CCGGGGA 127720 1.4033496 6.3450813 1
GGCAGAT 153185 1.4024336 5.504109 1
CTCGGGG 127635 1.4021721 6.236627 1
CTCAGGT 152370 1.3992828 5.4484715 1
GTTTCAC 166590 1.3986353 5.1481233 5
ATTGAAA 200370 1.3975999 5.2505746 6
CCAAATC 165120 1.3913027 5.2453947 2
CGGGGCT 124575 1.3685557 5.5362854 1
CCCAGTT 148190 1.3653387 6.769585 1
GAAATCT 178255 1.3642135 5.355349 3
CCCCAAC 133980 1.3593094 5.150644 1
AATTCAA 194080 1.3581458 5.336082 5
TTGAACT 177395 1.3573959 5.5036883 7
CCCATTT 160915 1.3554002 5.6166277 1
GGGAAAT 162145 1.352942 8.69337 1
GGTCTGC 134595 1.3517925 6.915455 5
GTGGAAT 161955 1.3511218 6.8129573 1
GGAATTT 177110 1.3508054 5.127632 3
CTCAAAT 175470 1.3472832 5.2592316 1
GGGGTTT 147690 1.3472581 5.593907 2
GGGAGAT 147530 1.3462663 6.666666 1
AATCCAA 175200 1.3454438 5.0019283 5
TGGAATC 159740 1.3369936 5.0507483 2
AGATCCA 159145 1.336594 5.7752604 4
GGGTTTC 145170 1.3285933 5.9485474 3
CCAGATT 158155 1.3280487 5.102398 2
AAATTGA 189925 1.324745 5.7991633 4
CAGGGAT 144430 1.3222802 6.888656 1
GTGAAAT 172960 1.3193829 6.431937 1
CCCAAAT 156510 1.3187548 7.59469 1
CTTGGAT 156030 1.3057145 6.027948 1
CGCTGCT 128915 1.2989725 5.185732 1
CTCCAAT 153705 1.2948949 5.1432633 1
CTCAGAT 153865 1.292025 6.6699567 1
GCTGAAT 153535 1.285059 6.2821517 1
GGGGTCT 128245 1.2838259 6.72096 3
AGGTGTC 139665 1.2784337 6.1325874 4
CCTGCAT 137755 1.2691965 5.136139 1
CCCGCCT 114200 1.266905 5.9520373 1
CCCCATT 136480 1.2615545 5.6948643 1
CCTGAAT 148550 1.2473942 5.7751584 1
GGAAATC 148585 1.2438444 5.0672054 2
AGATTCA 160960 1.2318522 5.159405 4
GGTATTT 161320 1.2301624 5.0486875 3
CTCCCAT 132620 1.2258745 5.281944 1
GCCAGAT 133365 1.2249643 7.133395 1
TGGGATC 133780 1.2245649 5.4896374 2
GGAATCT 145400 1.2169706 5.0585275 3
CCCAAAC 131480 1.2157593 5.55055 1
GTGGGAT 131945 1.2038382 6.1560426 1
GGGATTT 142955 1.1924057 5.6116724 3
GGGTTTG 130160 1.1873459 5.046391 3
CACAAAT 154310 1.1850197 5.01715 1
GAATTCA 154640 1.1834842 5.159405 4
GCCAAAT 139680 1.1731154 5.428342 1
CAGATTG 140095 1.1725687 5.370061 3
AATTGAA 168070 1.1723043 5.4258075 5
CCGGGCT 105980 1.1680756 5.441528 1
AGATTGA 152715 1.1649488 6.359951 4
CCGAGAG 115530 1.1607181 5.3155828 1
CGGGAAG 114835 1.1499814 5.2144084 1
CCCCCCT 103065 1.1471088 5.2308607 1
CCCACAT 123510 1.1418644 6.5992746 1
GGGATTA 136700 1.1404301 5.503966 3
CCCCGCT 102650 1.1387722 6.2875814 1
CGGGGGA 102605 1.1237252 5.8912554 1
CCCTGAT 120515 1.1103569 5.449109 1
CCCCCAT 109095 1.1066434 6.584693 1
GGGATCT 118845 1.0878562 5.349086 3
GAATTTA 155345 1.0833579 5.5548086 4
CGGGTCT 104725 1.0517958 7.2288756 3
GGGAATC 114840 1.0513787 5.2477946 2
GGGGAAT 111575 1.0181636 7.006369 1
CCCGGGT 90830 1.0010974 7.2314363 1
CCGGGAA 97225 0.97680974 5.17533 1
CTGGTAT 114610 0.9590972 5.280296 1
CCCGCTT 93635 0.9465645 5.8094816 1
GGGGGAT 93540 0.93351865 6.032443 1
CGGGGGT 83365 0.912851 5.294075 1
CCGGGAC 82300 0.9072403 5.3296227 1
CTCGGCT 86270 0.8692732 5.0732026 1
CGGGGAT 82690 0.8279309 5.3858886 1
CGGGGAA 82355 0.82471997 5.438083 1
GTCGGGG 75095 0.82229394 6.277478 1
CCCGTCT 78535 0.79391724 5.9082665 1
CCGGGTT 75725 0.760537 6.047471 1
GTCGGGT 75320 0.754008 5.711031 1
AGATCGG 81865 0.7494874 7.6479044 90-94
TCGGGTC 69875 0.70178306 5.6868496 2
CCCGGAT 69365 0.6990567 6.335571 1
CGGGGTT 62805 0.6287238 5.8880453 1
CCGGGAT 61920 0.62199587 6.062545 1
GATCGGA 60635 0.5551233 6.4630303 90-94