hg19_v1_chr12_+_109551041_109551084	0.39498	LHX3,4.p2	
hg19_v1_chr3_-_57234279_57234279	0.378661	LHX3,4.p2	NM_003865|HESX1|8820|HESX homeobox 1
hg19_v1_chr1_+_43253660_43253660	0.375755	LHX3,4.p2	NM_001242750|LOC100129924|100129924|uncharacterized LOC100129924
hg19_v1_chr9_+_12693385_12693466	0.371931	LHX3,4.p2	NM_000550|TYRP1|7306|tyrosinase-related protein 1	X51420|TYRP1|7306|tyrosinase-related protein 1	BC052608|TYRP1|7306|tyrosinase-related protein 1
hg19_v1_chr3_+_151591428_151591478	0.351468	LHX3,4.p2	AK290420|SUCNR1|56670|succinate receptor 1	NM_033050|SUCNR1|56670|succinate receptor 1	BC030948|SUCNR1|56670|succinate receptor 1	AF247785|SUCNR1|56670|succinate receptor 1
hg19_v1_chr5_+_147691988_147692026	0.318323	LHX3,4.p2	AF268198|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)	NM_032566|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)	AY359072|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)	BC109385|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)	BC110067|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)
hg19_v1_chr8_+_32785485_32785494	0.301424	LHX3,4.p2	
hg19_v1_chr1_+_168250277_168250328	0.300734	LHX3,4.p2	AJ010277|TBX19|9095|T-box 19	NM_005149|TBX19|9095|T-box 19	BC093664|TBX19|9095|T-box 19	BC093666|TBX19|9095|T-box 19	EU446671|TBX19|9095|T-box 19
hg19_v1_chr12_-_10021932_10021984	0.28229	LHX3,4.p2	X96719|CLEC2B|9976|C-type lectin domain family 2, member B	AY142147|CLEC2B|9976|C-type lectin domain family 2, member B	AB015628|CLEC2B|9976|C-type lectin domain family 2, member B	BC005254|CLEC2B|9976|C-type lectin domain family 2, member B	AK311232|CLEC2B|9976|C-type lectin domain family 2, member B	AK313916|CLEC2B|9976|C-type lectin domain family 2, member B	AK307334|CLEC2B|9976|C-type lectin domain family 2, member B
hg19_v1_chr12_-_10282680_10282867	0.280593	LHX3,4.p2	AF400595|CLEC7A|64581|C-type lectin domain family 7, member A	AF400596|CLEC7A|64581|C-type lectin domain family 7, member A	AF400597|CLEC7A|64581|C-type lectin domain family 7, member A	AF400598|CLEC7A|64581|C-type lectin domain family 7, member A	AF400599|CLEC7A|64581|C-type lectin domain family 7, member A	AF400600|CLEC7A|64581|C-type lectin domain family 7, member A	AF400601|CLEC7A|64581|C-type lectin domain family 7, member A	AF400602|CLEC7A|64581|C-type lectin domain family 7, member A	AY026769|CLEC7A|64581|C-type lectin domain family 7, member A	AY026770|CLEC7A|64581|C-type lectin domain family 7, member A	AY026771|CLEC7A|64581|C-type lectin domain family 7, member A	AF313469|CLEC7A|64581|C-type lectin domain family 7, member A	BC013385|CLEC7A|64581|C-type lectin domain family 7, member A	AY009090|CLEC7A|64581|C-type lectin domain family 7, member A	AK297028|CLEC7A|64581|C-type lectin domain family 7, member A	BC093829|CLEC7A|64581|C-type lectin domain family 7, member A	BC093831|CLEC7A|64581|C-type lectin domain family 7, member A	BC071746|CLEC7A|64581|C-type lectin domain family 7, member A	AK298679|CLEC7A|64581|C-type lectin domain family 7, member A	AK298724|CLEC7A|64581|C-type lectin domain family 7, member A	AK313247|CLEC7A|64581|C-type lectin domain family 7, member A	CR749536|CLEC7A|64581|C-type lectin domain family 7, member A	AK295108|CLEC7A|64581|C-type lectin domain family 7, member A	AF313468|CLEC7A|64581|C-type lectin domain family 7, member A	AJ312372|CLEC7A|64581|C-type lectin domain family 7, member A	AJ312373|CLEC7A|64581|C-type lectin domain family 7, member A	AY359002|CLEC7A|64581|C-type lectin domain family 7, member A	AK294111|CLEC7A|64581|C-type lectin domain family 7, member A	NM_022570|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197947|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197948|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197949|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197950|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197954|CLEC7A|64581|C-type lectin domain family 7, member A
hg19_v1_chr10_+_5238756_5238834	0.237542	LHX3,4.p2	AK314988|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)	BC020744|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)	NM_001818|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)	S68287|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)	AB031085|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)	AB045829|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)	DQ891424|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)	DQ894598|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)	M33375|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)	D26125|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)
hg19_v1_chrM_+_10123_10283	0.232435	LHX3,4.p2	
hg19_v1_chr6_-_87804773_87804864	0.224282	LHX3,4.p2	V00518|CGA|1081|glycoprotein hormones, alpha polypeptide	AK311972|CGA|1081|glycoprotein hormones, alpha polypeptide	BC055080|CGA|1081|glycoprotein hormones, alpha polypeptide	BC010957|CGA|1081|glycoprotein hormones, alpha polypeptide	BC020782|CGA|1081|glycoprotein hormones, alpha polypeptide	NM_000735|CGA|1081|glycoprotein hormones, alpha polypeptide	NM_001252383|CGA|1081|glycoprotein hormones, alpha polypeptide
hg19_v1_chr2_-_99871569_99871569	0.208677	LHX3,4.p2	NM_175735|LYG2|254773|lysozyme G-like 2
hg19_v1_chr10_+_695887_696016	0.205692	LHX3,4.p2	AK096000|C10orf108|414235|chromosome 10 open reading frame 108	AK296168|C10orf108|414235|chromosome 10 open reading frame 108	AK096013|C10orf108|414235|chromosome 10 open reading frame 108
hg19_v1_chr2_+_27719702_27719764	0.19985	LHX3,4.p2	NM_001486|GCKR|2646|glucokinase (hexokinase 4) regulator	Z48475|GCKR|2646|glucokinase (hexokinase 4) regulator	AK298448|GCKR|2646|glucokinase (hexokinase 4) regulator	AK303784|GCKR|2646|glucokinase (hexokinase 4) regulator	AK291846|GCKR|2646|glucokinase (hexokinase 4) regulator	BC130481|GCKR|2646|glucokinase (hexokinase 4) regulator	BC130483|GCKR|2646|glucokinase (hexokinase 4) regulator	AK309599|GCKR|2646|glucokinase (hexokinase 4) regulator	HQ258318|GCKR|2646|glucokinase (hexokinase 4) regulator
hg19_v1_chr6_+_31496738_31496756	0.197873	LHX3,4.p2	NM_001011700|MCCD1|401250|mitochondrial coiled-coil domain 1	BC132994|MCCD1|401250|mitochondrial coiled-coil domain 1	BC132996|MCCD1|401250|mitochondrial coiled-coil domain 1
hg19_v1_chr17_+_74463629_74463686	0.195627	LHX3,4.p2	NM_001088|AANAT|15|aralkylamine N-acetyltransferase	U40347|AANAT|15|aralkylamine N-acetyltransferase	AB593119|AANAT|15|aralkylamine N-acetyltransferase	BC069434|AANAT|15|aralkylamine N-acetyltransferase
hg19_v1_chr5_-_137475076_137475131	0.19404	LHX3,4.p2	U90450|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	AK312181|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	AF067724|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	BC026182|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	NM_003551|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)
hg19_v1_chr13_+_24463006_24463027	0.190994	LHX3,4.p2	BC015452|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)	BC073902|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)	NM_001014442|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)
hg19_v1_chr4_+_88896838_88896866	0.190043	LHX3,4.p2	BX648003|SPP1|6696|secreted phosphoprotein 1	J04765|SPP1|6696|secreted phosphoprotein 1	AK057738|SPP1|6696|secreted phosphoprotein 1	AK075463|SPP1|6696|secreted phosphoprotein 1	AK290090|SPP1|6696|secreted phosphoprotein 1	AK296035|SPP1|6696|secreted phosphoprotein 1	BC007016|SPP1|6696|secreted phosphoprotein 1	BC017387|SPP1|6696|secreted phosphoprotein 1	BC022844|SPP1|6696|secreted phosphoprotein 1	AK295491|SPP1|6696|secreted phosphoprotein 1
hg19_v1_chr4_+_88896868_88896891	0.188083	LHX3,4.p2	AK290104|SPP1|6696|secreted phosphoprotein 1	M83248|SPP1|6696|secreted phosphoprotein 1	AK315461|SPP1|6696|secreted phosphoprotein 1	AF052124|SPP1|6696|secreted phosphoprotein 1
hg19_v1_chr12_-_26277807_26278036	0.186663	LHX3,4.p2	AY665467|BHLHE41|79365|basic helix-loop-helix family, member e41	AK303677|BHLHE41|79365|basic helix-loop-helix family, member e41	AB044088|BHLHE41|79365|basic helix-loop-helix family, member e41	BC025968|BHLHE41|79365|basic helix-loop-helix family, member e41	NM_030762|BHLHE41|79365|basic helix-loop-helix family, member e41
hg19_v1_chr16_-_67517715_67517715	0.185677	LHX3,4.p2	NM_001138|AGRP|181|agouti related protein homolog (mouse)	U88063|AGRP|181|agouti related protein homolog (mouse)
hg19_v1_chr6_-_167797917_167797997	0.177934	LHX3,4.p2	BC068592|TCP10|6953|t-complex 10 homolog (mouse)	U03399|TCP10|6953|t-complex 10 homolog (mouse)	BC063451|TCP10|6953|t-complex 10 homolog (mouse)	NM_004610|TCP10|6953|t-complex 10 homolog (mouse)
hg19_v1_chr20_-_34117447_34117480	0.16571	LHX3,4.p2	AK058089|C20orf173|140873|chromosome 20 open reading frame 173	AK310337|C20orf173|140873|chromosome 20 open reading frame 173	NM_001145350|C20orf173|140873|chromosome 20 open reading frame 173
hg19_v1_chr7_-_107880492_107880613	0.16534	LHX3,4.p2	AJ001057|NRCAM|4897|neuronal cell adhesion molecule	NM_001037132|NRCAM|4897|neuronal cell adhesion molecule
hg19_v1_chr14_-_71001731_71001731	0.16229	LHX3,4.p2	BC025378|ADAM20|8748|ADAM metallopeptidase domain 20	NM_003814|ADAM20|8748|ADAM metallopeptidase domain 20
hg19_v1_chr5_+_59784004_59784077	0.161734	LHX3,4.p2	AL050198|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)	AK094518|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)
hg19_v1_chrX_-_102531673_102531796	0.157499	LHX3,4.p2	BC132922|TCEAL5|340543|transcription elongation factor A (SII)-like 5	BC132924|TCEAL5|340543|transcription elongation factor A (SII)-like 5	NM_001012979|TCEAL5|340543|transcription elongation factor A (SII)-like 5
hg19_v1_chr4_+_88896899_88896928	0.155263	LHX3,4.p2	AY956318|SPP1|6696|secreted phosphoprotein 1	X13694|SPP1|6696|secreted phosphoprotein 1
hg19_v1_chr6_+_26104103_26104175	0.149485	LHX3,4.p2	BC130558|HIST1H4C|8364|histone cluster 1, H4c	BC130560|HIST1H4C|8364|histone cluster 1, H4c	EU446977|HIST1H4C|8364|histone cluster 1, H4c	HQ258693|HIST2H4B|554313|histone cluster 2, H4b	NM_003542|HIST1H4C|8364|histone cluster 1, H4c
hg19_v1_chr2_+_210444364_210444424	0.141894	LHX3,4.p2	NM_002374|MAP2|4133|microtubule-associated protein 2	NM_031845|MAP2|4133|microtubule-associated protein 2	NM_031847|MAP2|4133|microtubule-associated protein 2	U01828|MAP2|4133|microtubule-associated protein 2	AK307603|MAP2|4133|microtubule-associated protein 2
hg19_v1_chr9_-_95166827_95166980	0.139685	LHX3,4.p2	AF086912|OGN|4969|osteoglycin	AF100758|OGN|4969|osteoglycin	NM_014057|OGN|4969|osteoglycin	NM_033014|OGN|4969|osteoglycin	AK289628|OGN|4969|osteoglycin	AK295433|OGN|4969|osteoglycin
hg19_v1_chr19_-_36304200_36304200	0.137706	LHX3,4.p2	NM_021232|PRODH2|58510|proline dehydrogenase (oxidase) 2	U80018|PRODH2|58510|proline dehydrogenase (oxidase) 2
hg19_v1_chr11_-_71524890_71524923	0.123869	LHX3,4.p2	BC073927|LOC285407|285407|asparagine-linked glycosylation 1 homolog pseudogene
hg19_v1_chr3_+_82035288_82035316	0.122618	LHX3,4.p2	
hg19_v1_chr6_-_53013581_53013626	0.122546	LHX3,4.p2	BC096288|GCM1|8521|glial cells missing homolog 1 (Drosophila)	BC096289|GCM1|8521|glial cells missing homolog 1 (Drosophila)	AK309881|GCM1|8521|glial cells missing homolog 1 (Drosophila)	NM_003643|GCM1|8521|glial cells missing homolog 1 (Drosophila)	D88613|GCM1|8521|glial cells missing homolog 1 (Drosophila)
hg19_v1_chr8_+_22210311_22210342	0.1153	LHX3,4.p2	AK000397|PIWIL2|55124|piwi-like 2 (Drosophila)
hg19_v1_chr9_+_75766777_75766780	0.111659	LHX3,4.p2	AK296808|ANXA1|301|annexin A1	BC035993|ANXA1|301|annexin A1	NM_000700|ANXA1|301|annexin A1	X05908|ANXA1|301|annexin A1
hg19_v1_chr4_+_88896801_88896819	0.111436	LHX3,4.p2	NM_000582|SPP1|6696|secreted phosphoprotein 1	NM_001040058|SPP1|6696|secreted phosphoprotein 1	NM_001040060|SPP1|6696|secreted phosphoprotein 1	NM_001251829|SPP1|6696|secreted phosphoprotein 1	NM_001251830|SPP1|6696|secreted phosphoprotein 1	JF412667|SPP1|6696|secreted phosphoprotein 1	BC093033|SPP1|6696|secreted phosphoprotein 1
hg19_v1_chr12_-_53600999_53601045	0.110697	LHX3,4.p2	M68892|ITGB7|3695|integrin, beta 7	NM_000889|ITGB7|3695|integrin, beta 7	S80335|ITGB7|3695|integrin, beta 7	AK298239|ITGB7|3695|integrin, beta 7	AK301523|ITGB7|3695|integrin, beta 7	AK311703|ITGB7|3695|integrin, beta 7
hg19_v1_chr7_+_28452143_28452143	0.109987	LHX3,4.p2	L05515|CREB5|9586|cAMP responsive element binding protein 5	NM_182898|CREB5|9586|cAMP responsive element binding protein 5
hg19_v1_chr3_+_46411632_46411632	0.106124	LHX3,4.p2	NM_000579|CCR5|1234|chemokine (C-C motif) receptor 5	NM_001100168|CCR5|1234|chemokine (C-C motif) receptor 5
hg19_v1_chr14_-_61115906_61116274	0.105689	LHX3,4.p2	BT007083|SIX1|6495|SIX homeobox 1	BC008874|SIX1|6495|SIX homeobox 1	NM_005982|SIX1|6495|SIX homeobox 1	X91868|SIX1|6495|SIX homeobox 1
hg19_v1_chr6_-_133035180_133035196	0.103105	LHX3,4.p2	U39664|VNN1|8876|vanin 1	BC096268|VNN1|8876|vanin 1	AJ132099|VNN1|8876|vanin 1	BC096265|VNN1|8876|vanin 1	BC096266|VNN1|8876|vanin 1	BC096267|VNN1|8876|vanin 1	AK290425|VNN1|8876|vanin 1	AK314265|VNN1|8876|vanin 1	NM_004666|VNN1|8876|vanin 1
hg19_v1_chr3_+_73110809_73110809	0.102667	LHX3,4.p2	BC051316|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2	BC064501|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2	NM_018029|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2
hg19_v1_chr19_-_36303724_36303749	0.101552	LHX3,4.p2	BC039710|PRODH2|58510|proline dehydrogenase (oxidase) 2
hg19_v1_chr13_-_99910548_99910681	0.0998102	LHX3,4.p2	AF261135|GPR18|2841|G protein-coupled receptor 18	BC050646|GPR18|2841|G protein-coupled receptor 18	AF339781|GPR18|2841|G protein-coupled receptor 18	BC008569|GPR18|2841|G protein-coupled receptor 18	NM_001098200|GPR18|2841|G protein-coupled receptor 18	NM_005292|GPR18|2841|G protein-coupled receptor 18
hg19_v1_chr12_+_54410893_54410956	0.0990269	LHX3,4.p2	BC034922|HOXC5|3222|homeobox C5	BC044635|HOXC5|3222|homeobox C5	M16938|HOXC6|3223|homeobox C6	AK314829|HOXC6|3223|homeobox C6
hg19_v1_chr4_+_186990308_186990350	0.0978392	LHX3,4.p2	BC017954|TLR3|7098|toll-like receptor 3	NM_003265|TLR3|7098|toll-like receptor 3	AK314208|TLR3|7098|toll-like receptor 3	BC068487|TLR3|7098|toll-like receptor 3	BC094737|TLR3|7098|toll-like receptor 3	BC059372|TLR3|7098|toll-like receptor 3	BC096333|TLR3|7098|toll-like receptor 3	BC096334|TLR3|7098|toll-like receptor 3	BC096335|TLR3|7098|toll-like receptor 3	DQ445682|TLR3|7098|toll-like receptor 3	U88879|TLR3|7098|toll-like receptor 3
hg19_v1_chr1_+_117544371_117544439	0.0976481	LHX3,4.p2	AK307542|CD101|9398|CD101 molecule	NM_004258|CD101|9398|CD101 molecule	AK298237|CD101|9398|CD101 molecule	BC130327|CD101|9398|CD101 molecule	BC136484|CD101|9398|CD101 molecule	BC171768|CD101|9398|CD101 molecule	Z33642|CD101|9398|CD101 molecule
hg19_v1_chr7_-_14025826_14026138	0.0963067	LHX3,4.p2	AK293802|ETV1|2115|ets variant 1	AK311134|ETV1|2115|ets variant 1	AK311194|ETV1|2115|ets variant 1	CR627389|ETV1|2115|ets variant 1	AK294572|ETV1|2115|ets variant 1	AK311707|ETV1|2115|ets variant 1	AK316007|ETV1|2115|ets variant 1	AK299693|ETV1|2115|ets variant 1	NM_001163150|ETV1|2115|ets variant 1	NM_001163151|ETV1|2115|ets variant 1	NM_001163152|ETV1|2115|ets variant 1
hg19_v1_chr2_+_177016112_177016314	0.0958505	LHX3,4.p2	NM_014621|HOXD4|3233|homeobox D4	X04706|HOXD4|3233|homeobox D4	AK313885|HOXD4|3233|homeobox D4	BC016763|HOXD4|3233|homeobox D4	BC074797|HOXD4|3233|homeobox D4
hg19_v1_chr1_+_192127591_192127616	0.0927661	LHX3,4.p2	NM_130782|RGS18|64407|regulator of G-protein signaling 18	AK292015|RGS18|64407|regulator of G-protein signaling 18	BC020632|RGS18|64407|regulator of G-protein signaling 18	AK057114|RGS18|64407|regulator of G-protein signaling 18	AK315377|RGS18|64407|regulator of G-protein signaling 18	AF268036|RGS18|64407|regulator of G-protein signaling 18	AF076642|RGS18|64407|regulator of G-protein signaling 18
hg19_v1_chrX_+_70765479_70765566	0.0926358	LHX3,4.p2	AL050366|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
hg19_v1_chrX_-_13835187_13835203	0.0924359	LHX3,4.p2	AK299675|GPM6B|2824|glycoprotein M6B	BC047295|GPM6B|2824|glycoprotein M6B
hg19_v1_chr2_-_175462428_175462535	0.0921947	LHX3,4.p2	BC002914|WIPF1|7456|WAS/WASL interacting protein family, member 1	X86019|WIPF1|7456|WAS/WASL interacting protein family, member 1
hg19_v1_chr4_+_166131170_166131187	0.0920068	LHX3,4.p2	NM_001161521|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	NM_001161522|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	AK294103|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	BX647776|KLHL2|11275|kelch-like 2, Mayven (Drosophila)
hg19_v1_chr1_+_97260515_97260652	0.0910591	LHX3,4.p2	
hg19_v1_chr7_-_87342569_87342726	0.0903282	LHX3,4.p2	AY425005|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1	AY425006|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1	M14758|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1	AF345625|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1	AK290159|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1	NM_000927|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1	AY425007|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1
hg19_v1_chr1_+_198608216_198608234	0.0873307	LHX3,4.p2	AK307635|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK130573|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK292131|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK299986|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK303539|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC017863|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	Y00638|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC014239|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC031525|PTPRC|5788|protein tyrosine phosphatase, receptor type, C
hg19_v1_chr6_-_24583454_24583454	0.0864348	LHX3,4.p2	AK310289|KIAA0319|9856|KIAA0319	NM_001252328|KIAA0319|9856|KIAA0319
hg19_v1_chr10_+_102222797_102222814	0.0777561	LHX3,4.p2	Y11094|WNT8B|7479|wingless-type MMTV integration site family, member 8B	NM_003393|WNT8B|7479|wingless-type MMTV integration site family, member 8B	AB073637|WNT8B|7479|wingless-type MMTV integration site family, member 8B
hg19_v1_chr3_+_113616317_113616402	0.0773843	LHX3,4.p2	AK304142|GRAMD1C|54762|GRAM domain containing 1C	NM_001172105|GRAMD1C|54762|GRAM domain containing 1C	AY358725|GRAMD1C|54762|GRAM domain containing 1C	AK292964|GRAMD1C|54762|GRAM domain containing 1C
hg19_v1_chr19_+_15838833_15838853	0.0771273	LHX3,4.p2	BC112178|OR10H2|26538|olfactory receptor, family 10, subfamily H, member 2	BC113647|OR10H2|26538|olfactory receptor, family 10, subfamily H, member 2	NM_013939|OR10H2|26538|olfactory receptor, family 10, subfamily H, member 2	HQ258140|OR10H2|26538|olfactory receptor, family 10, subfamily H, member 2	BC069085|OR10H2|26538|olfactory receptor, family 10, subfamily H, member 2	BC069457|OR10H2|26538|olfactory receptor, family 10, subfamily H, member 2
hg19_v1_chr4_+_169418167_169418274	0.0761274	LHX3,4.p2	AF464873|PALLD|23022|palladin, cytoskeletal associated protein	NM_001166108|PALLD|23022|palladin, cytoskeletal associated protein	NM_016081|PALLD|23022|palladin, cytoskeletal associated protein	BC140850|PALLD|23022|palladin, cytoskeletal associated protein	BC144666|PALLD|23022|palladin, cytoskeletal associated protein
hg19_v1_chr17_-_39092714_39093086	0.0756816	LHX3,4.p2	AK314604|KRT23|25984|keratin 23 (histone deacetylase inducible)	DQ891640|KRT23|25984|keratin 23 (histone deacetylase inducible)	DQ894829|KRT23|25984|keratin 23 (histone deacetylase inducible)	AK002047|KRT23|25984|keratin 23 (histone deacetylase inducible)	AF102848|KRT23|25984|keratin 23 (histone deacetylase inducible)	AK289449|KRT23|25984|keratin 23 (histone deacetylase inducible)	AK310880|KRT23|25984|keratin 23 (histone deacetylase inducible)
hg19_v1_chr11_+_99426872_99426875	0.0751485	LHX3,4.p2	AB013802|CNTN5|53942|contactin 5	AB013803|CNTN5|53942|contactin 5	NM_175566|CNTN5|53942|contactin 5
hg19_v1_chr21_-_27372461_27372498	0.0745373	LHX3,4.p2	X06981|APP|351|amyloid beta (A4) precursor protein	X06982|APP|351|amyloid beta (A4) precursor protein
hg19_v1_chr3_-_64211111_64211130	0.0726374	LHX3,4.p2	BC119002|PRICKLE2|166336|prickle homolog 2 (Drosophila)	AL833539|PRICKLE2|166336|prickle homolog 2 (Drosophila)	NM_198859|PRICKLE2|166336|prickle homolog 2 (Drosophila)
hg19_v1_chr2_+_177016337_177016361	0.0722116	LHX3,4.p2	
hg19_v1_chr3_+_156544075_156544147	0.0721957	LHX3,4.p2	AK094480|LEKR1|389170|leucine, glutamate and lysine rich 1	AK131473|LEKR1|389170|leucine, glutamate and lysine rich 1	NM_001004316|LEKR1|389170|leucine, glutamate and lysine rich 1	BC041967|LEKR1|389170|leucine, glutamate and lysine rich 1	NM_001193283|LEKR1|389170|leucine, glutamate and lysine rich 1
hg19_v1_chr9_+_118916069_118916071	0.0712713	LHX3,4.p2	NM_002581|PAPPA|5069|pregnancy-associated plasma protein A, pappalysin 1
hg19_v1_chr5_+_71502700_71502827	0.0709502	LHX3,4.p2	AK125194|MAP1B|4131|microtubule-associated protein 1B
hg19_v1_chr7_+_77469446_77469572	0.0695068	LHX3,4.p2	BC022419|PHTF2|57157|putative homeodomain transcription factor 2	NM_001127357|PHTF2|57157|putative homeodomain transcription factor 2	NM_001127359|PHTF2|57157|putative homeodomain transcription factor 2	NM_020432|PHTF2|57157|putative homeodomain transcription factor 2	AL831969|PHTF2|57157|putative homeodomain transcription factor 2	BC127093|PHTF2|57157|putative homeodomain transcription factor 2	BC127094|PHTF2|57157|putative homeodomain transcription factor 2	AM392983|PHTF2|57157|putative homeodomain transcription factor 2	AM393200|PHTF2|57157|putative homeodomain transcription factor 2
hg19_v1_chr6_+_31583766_31583888	0.0685679	LHX3,4.p2	NM_032955|AIF1|199|allograft inflammatory factor 1	EF070982|AIF1|199|allograft inflammatory factor 1	AF299327|AIF1|199|allograft inflammatory factor 1	CR542153|AIF1|199|allograft inflammatory factor 1
hg19_v1_chr6_+_136172802_136172901	0.0684444	LHX3,4.p2	AK290582|PDE7B|27115|phosphodiesterase 7B	AB038040|PDE7B|27115|phosphodiesterase 7B	NM_018945|PDE7B|27115|phosphodiesterase 7B	AJ251860|PDE7B|27115|phosphodiesterase 7B	BC070267|PDE7B|27115|phosphodiesterase 7B
hg19_v1_chr1_-_232651227_232651311	0.0669587	LHX3,4.p2	BC006013|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2	NM_020808|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2	AY168879|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2
hg19_v1_chr21_-_43771069_43771207	0.066374	LHX3,4.p2	X51698|TFF2|7032|trefoil factor 2	BC032820|TFF2|7032|trefoil factor 2	NM_005423|TFF2|7032|trefoil factor 2
hg19_v1_chr15_+_93443559_93443602	0.0662396	LHX3,4.p2	BC007347|CHD2|1106|chromodomain helicase DNA binding protein 2	BC020810|CHD2|1106|chromodomain helicase DNA binding protein 2
hg19_v1_chrX_-_13835012_13835171	0.065944	LHX3,4.p2	AM392527|GPM6B|2824|glycoprotein M6B	AM392754|GPM6B|2824|glycoprotein M6B	AM392867|GPM6B|2824|glycoprotein M6B	AM392943|GPM6B|2824|glycoprotein M6B	AM392957|GPM6B|2824|glycoprotein M6B	AM392968|GPM6B|2824|glycoprotein M6B	AM392974|GPM6B|2824|glycoprotein M6B	AM393048|GPM6B|2824|glycoprotein M6B	AM393215|GPM6B|2824|glycoprotein M6B	AM393570|GPM6B|2824|glycoprotein M6B	AM393576|GPM6B|2824|glycoprotein M6B	AM393741|GPM6B|2824|glycoprotein M6B	AM393770|GPM6B|2824|glycoprotein M6B	AM393783|GPM6B|2824|glycoprotein M6B	AM393822|GPM6B|2824|glycoprotein M6B	DQ891541|GPM6B|2824|glycoprotein M6B	DQ894729|GPM6B|2824|glycoprotein M6B	EU832134|GPM6B|2824|glycoprotein M6B	EU832227|GPM6B|2824|glycoprotein M6B	BC008151|GPM6B|2824|glycoprotein M6B
hg19_v1_chr12_+_28410132_28410148	0.0657554	LHX3,4.p2	AY289196|CCDC91|55297|coiled-coil domain containing 91	NM_018318|CCDC91|55297|coiled-coil domain containing 91
hg19_v1_chr10_+_17270257_17270257	0.0645007	LHX3,4.p2	NM_003380|VIM|7431|vimentin
hg19_v1_chr9_+_130026755_130026860	0.0625752	LHX3,4.p2	NM_032293|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3	AK293732|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3	AK095679|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3
hg19_v1_chr22_+_23487512_23487697	0.0623583	LHX3,4.p2	AB023061|RAB36|9609|RAB36, member RAS oncogene family	NM_004914|RAB36|9609|RAB36, member RAS oncogene family	BC104989|RAB36|9609|RAB36, member RAS oncogene family	BC104991|RAB36|9609|RAB36, member RAS oncogene family	CR456553|RAB36|9609|RAB36, member RAS oncogene family	AF133588|RAB36|9609|RAB36, member RAS oncogene family	AY336745|RAB36|9609|RAB36, member RAS oncogene family	CU013153|RAB36|9609|RAB36, member RAS oncogene family	CU013441|RAB36|9609|RAB36, member RAS oncogene family	AK296052|RAB36|9609|RAB36, member RAS oncogene family
hg19_v1_chr8_+_9953061_9953065	0.062012	LHX3,4.p2	AK293488|MSRA|4482|methionine sulfoxide reductase A	AY958430|MSRA|4482|methionine sulfoxide reductase A	AY958431|MSRA|4482|methionine sulfoxide reductase A	BC047552|MSRA|4482|methionine sulfoxide reductase A	NM_001135671|MSRA|4482|methionine sulfoxide reductase A	NM_001199729|MSRA|4482|methionine sulfoxide reductase A
hg19_v1_chr21_-_36231794_36231878	0.0617092	LHX3,4.p2	S76350|RUNX1|861|runt-related transcription factor 1
hg19_v1_chr12_-_56756526_56756606	0.0616006	LHX3,4.p2	L27050|APOF|319|apolipoprotein F	AK314892|APOF|319|apolipoprotein F	BC026257|APOF|319|apolipoprotein F	NM_001638|APOF|319|apolipoprotein F	CR936663|APOF|319|apolipoprotein F
hg19_v1_chr10_+_91152321_91152405	0.0613317	LHX3,4.p2	NM_001548|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1	BC007091|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1	AK314588|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1	AK308688|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1	X03557|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1
hg19_v1_chr10_+_123748688_123748777	0.0610863	LHX3,4.p2	BC010219|TACC2|10579|transforming, acidic coiled-coil containing protein 2	NM_206861|TACC2|10579|transforming, acidic coiled-coil containing protein 2	NM_206862|TACC2|10579|transforming, acidic coiled-coil containing protein 2	AF528098|TACC2|10579|transforming, acidic coiled-coil containing protein 2	AF528099|TACC2|10579|transforming, acidic coiled-coil containing protein 2	BC144599|TACC2|10579|transforming, acidic coiled-coil containing protein 2	BC144600|TACC2|10579|transforming, acidic coiled-coil containing protein 2	BC150627|TACC2|10579|transforming, acidic coiled-coil containing protein 2	BC031036|TACC2|10579|transforming, acidic coiled-coil containing protein 2
hg19_v1_chrX_+_36065052_36065052	0.0605771	LHX3,4.p2	AK093920|CXorf59|286464|chromosome X open reading frame 59	NM_173695|CXorf59|286464|chromosome X open reading frame 59
hg19_v1_chr2_+_207406815_207406857	0.0594973	LHX3,4.p2	AK129906|ADAM23|8745|ADAM metallopeptidase domain 23
hg19_v1_chr3_+_136649316_136649358	0.0578357	LHX3,4.p2	NM_001190796|NCK1|4690|NCK adaptor protein 1	AK301460|NCK1|4690|NCK adaptor protein 1
hg19_v1_chr9_+_75766794_75766812	0.0577026	LHX3,4.p2	BC001275|ANXA1|301|annexin A1
hg19_v1_chr6_-_26108320_26108364	0.0576595	LHX3,4.p2	EU446962|HIST1H1T|3010|histone cluster 1, H1t	HQ258096|HIST1H1T|3010|histone cluster 1, H1t	BC130350|HIST1H1T|3010|histone cluster 1, H1t	BC069517|HIST1H1T|3010|histone cluster 1, H1t	NM_005323|HIST1H1T|3010|histone cluster 1, H1t
hg19_v1_chr18_+_66465316_66465369	0.0571604	LHX3,4.p2	NM_024781|CCDC102B|79839|coiled-coil domain containing 102B	CR749520|CCDC102B|79839|coiled-coil domain containing 102B
hg19_v1_chr1_-_53608120_53608303	0.0566278	LHX3,4.p2	JF917096|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7	DQ892299|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7	DQ895498|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7	BC012119|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7	BC017242|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7	AB593061|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7	BC000651|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7	NM_006671|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7	AB593059|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7	AB593060|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7
hg19_v1_chr9_+_12774988_12775045	0.0563401	LHX3,4.p2	NM_203403|C9orf150|286343|chromosome 9 open reading frame 150	AB073606|C9orf150|286343|chromosome 9 open reading frame 150	AK095824|C9orf150|286343|chromosome 9 open reading frame 150	BC036923|C9orf150|286343|chromosome 9 open reading frame 150
hg19_v1_chr1_-_93342706_93342706	0.0562811	LHX3,4.p2	NM_001252271|FAM69A|388650|family with sequence similarity 69, member A
hg19_v1_chr5_+_140247767_140247830	0.0560532	LHX3,4.p2	BC136706|PCDHA11|56138|protocadherin alpha 11	AJ007609|PCDHA11|56138|protocadherin alpha 11	NM_018902|PCDHA11|56138|protocadherin alpha 11	NM_031861|PCDHA11|56138|protocadherin alpha 11
hg19_v1_chr3_-_195310985_195311075	0.0558608	LHX3,4.p2	NM_001647|APOD|347|apolipoprotein D
hg19_v1_chr4_+_88754120_88754139	0.0555214	LHX3,4.p2	AK307774|MEPE|56955|matrix extracellular phosphoglycoprotein	NM_001184695|MEPE|56955|matrix extracellular phosphoglycoprotein	NM_001184696|MEPE|56955|matrix extracellular phosphoglycoprotein	NM_001184697|MEPE|56955|matrix extracellular phosphoglycoprotein	NM_020203|MEPE|56955|matrix extracellular phosphoglycoprotein	AJ276396|MEPE|56955|matrix extracellular phosphoglycoprotein	BC128158|MEPE|56955|matrix extracellular phosphoglycoprotein	AF325916|MEPE|56955|matrix extracellular phosphoglycoprotein
hg19_v1_chr7_+_102553343_102553521	0.0555073	LHX3,4.p2	NM_001031692|LRRC17|10234|leucine rich repeat containing 17	NM_005824|LRRC17|10234|leucine rich repeat containing 17	AK226021|LRRC17|10234|leucine rich repeat containing 17	AK225701|LRRC17|10234|leucine rich repeat containing 17	U32907|LRRC17|10234|leucine rich repeat containing 17	AK290305|LRRC17|10234|leucine rich repeat containing 17	BC027903|LRRC17|10234|leucine rich repeat containing 17	AY358889|LRRC17|10234|leucine rich repeat containing 17
hg19_v1_chr11_-_31014232_31014232	0.0552178	LHX3,4.p2	BX647348|DCDC5|100506627|doublecortin domain containing 5	NM_020869|DCDC5|100506627|doublecortin domain containing 5
hg19_v1_chr5_+_96212167_96212209	0.0541864	LHX3,4.p2	AK312864|ERAP2|64167|endoplasmic reticulum aminopeptidase 2	AB109031|ERAP2|64167|endoplasmic reticulum aminopeptidase 2	AB163917|ERAP2|64167|endoplasmic reticulum aminopeptidase 2	BC065240|ERAP2|64167|endoplasmic reticulum aminopeptidase 2
hg19_v1_chr4_+_41614911_41614927	0.0540055	LHX3,4.p2	AK298915|LIMCH1|22998|LIM and calponin homology domains 1	AK299297|LIMCH1|22998|LIM and calponin homology domains 1	BC068200|LIMCH1|22998|LIM and calponin homology domains 1	BX537916|LIMCH1|22998|LIM and calponin homology domains 1	CR749205|LIMCH1|22998|LIM and calponin homology domains 1	NM_001112719|LIMCH1|22998|LIM and calponin homology domains 1	NM_001112720|LIMCH1|22998|LIM and calponin homology domains 1
hg19_v1_chr6_-_64029847_64029881	0.0537388	LHX3,4.p2	DQ682605|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	DQ682606|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	BC130366|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	BC130368|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	AF242388|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	NM_001143940|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	NM_016571|LGSN|51557|lengsin, lens protein with glutamine synthetase domain
hg19_v1_chr11_+_22689653_22689653	0.0534531	LHX3,4.p2	BC013326|GAS2|2620|growth arrest-specific 2	BC040470|GAS2|2620|growth arrest-specific 2	NM_177553|GAS2|2620|growth arrest-specific 2
hg19_v1_chr11_+_59856136_59856238	0.0527167	LHX3,4.p2	AK304487|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)	AK310142|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)	NM_000139|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)	D10583|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)	BC074800|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)	BC074843|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)	JF411082|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)
hg19_v1_chr1_-_150738255_150738281	0.0524747	LHX3,4.p2	AK301472|CTSS|1520|cathepsin S	AK314482|CTSS|1520|cathepsin S
hg19_v1_chr12_+_58003962_58004100	0.0523666	LHX3,4.p2	AB370196|ARHGEF25|115557|Rho guanine nucleotide exchange factor (GEF) 25	NM_001111270|ARHGEF25|115557|Rho guanine nucleotide exchange factor (GEF) 25
hg19_v1_chr18_+_28956739_28956874	0.0521088	LHX3,4.p2	AY177664|DSG4|147409|desmoglein 4	NM_001134453|DSG4|147409|desmoglein 4	NM_177986|DSG4|147409|desmoglein 4	AY168788|DSG4|147409|desmoglein 4	AY228236|DSG4|147409|desmoglein 4	BC132907|DSG4|147409|desmoglein 4	BC132909|DSG4|147409|desmoglein 4	AY227350|DSG4|147409|desmoglein 4
hg19_v1_chr14_-_57960432_57960575	0.0520811	LHX3,4.p2	HQ258368|C14orf105|55195|chromosome 14 open reading frame 105	BC117405|C14orf105|55195|chromosome 14 open reading frame 105	BC143565|C14orf105|55195|chromosome 14 open reading frame 105	BC143566|C14orf105|55195|chromosome 14 open reading frame 105	BC143567|C14orf105|55195|chromosome 14 open reading frame 105	BC143568|C14orf105|55195|chromosome 14 open reading frame 105	AK307238|C14orf105|55195|chromosome 14 open reading frame 105	AK223127|C14orf105|55195|chromosome 14 open reading frame 105	AK001512|C14orf105|55195|chromosome 14 open reading frame 105	BC028060|C14orf105|55195|chromosome 14 open reading frame 105	NM_018168|C14orf105|55195|chromosome 14 open reading frame 105
hg19_v1_chr14_+_39583426_39583509	0.0520236	LHX3,4.p2	AF027150|GEMIN2|8487|gem (nuclear organelle) associated protein 2	NM_001009182|GEMIN2|8487|gem (nuclear organelle) associated protein 2	NM_001009183|GEMIN2|8487|gem (nuclear organelle) associated protein 2	NM_003616|GEMIN2|8487|gem (nuclear organelle) associated protein 2	BC028095|GEMIN2|8487|gem (nuclear organelle) associated protein 2	BC104968|GEMIN2|8487|gem (nuclear organelle) associated protein 2	AK313947|GEMIN2|8487|gem (nuclear organelle) associated protein 2	AB037701|GEMIN2|8487|gem (nuclear organelle) associated protein 2	AB037702|GEMIN2|8487|gem (nuclear organelle) associated protein 2	AB037703|GEMIN2|8487|gem (nuclear organelle) associated protein 2
hg19_v1_chr16_+_2809933_2810070	0.0518098	LHX3,4.p2	
hg19_v1_chr3_+_194207685_194207919	0.051462	LHX3,4.p2	AK091527|FLJ34208|401106|uncharacterized LOC401106
hg19_v1_chr22_+_44395090_44395090	0.0511642	LHX3,4.p2	AF303887|PARVB|29780|parvin, beta	NM_001003828|PARVB|29780|parvin, beta
hg19_v1_chr21_-_36252872_36253000	0.0510406	LHX3,4.p2	S76345|RUNX1|861|runt-related transcription factor 1	S76346|RUNX1|861|runt-related transcription factor 1
hg19_v1_chr1_+_171217632_171217691	0.0509561	LHX3,4.p2	AK290113|FMO1|2326|flavin containing monooxygenase 1	AK315100|FMO1|2326|flavin containing monooxygenase 1	M64082|FMO1|2326|flavin containing monooxygenase 1	NM_002021|FMO1|2326|flavin containing monooxygenase 1	AK296198|FMO1|2326|flavin containing monooxygenase 1
hg19_v1_chr4_+_74606222_74606375	0.0506465	LHX3,4.p2	NM_000584|IL8|3576|interleukin 8	Y00787|IL8|3576|interleukin 8	AK131067|IL8|3576|interleukin 8	AK311874|IL8|3576|interleukin 8	M17017|IL8|3576|interleukin 8	M26383|IL8|3576|interleukin 8	BC013615|IL8|3576|interleukin 8	DQ890564|IL8|3576|interleukin 8	DQ893727|IL8|3576|interleukin 8	BT007067|IL8|3576|interleukin 8	CR542151|IL8|3576|interleukin 8	Z11686|IL8|3576|interleukin 8
hg19_v1_chr7_+_18548899_18548948	0.0503455	LHX3,4.p2	NM_001204147|HDAC9|9734|histone deacetylase 9	NM_001204148|HDAC9|9734|histone deacetylase 9	AK304410|HDAC9|9734|histone deacetylase 9
hg19_v1_chr2_-_134326030_134326047	0.0500639	LHX3,4.p2	AK057980|NCKAP5|344148|NCK-associated protein 5	NM_207363|NCKAP5|344148|NCK-associated protein 5	NM_207481|NCKAP5|344148|NCK-associated protein 5
hg19_v1_chr3_+_149192367_149192437	0.049776	LHX3,4.p2	NM_004617|TM4SF4|7104|transmembrane 4 L six family member 4
hg19_v1_chr5_-_95158365_95158435	0.0496448	LHX3,4.p2	AF162769|GLRX|2745|glutaredoxin (thioltransferase)	BT006689|GLRX|2745|glutaredoxin (thioltransferase)	CR450312|GLRX|2745|glutaredoxin (thioltransferase)	CR542165|GLRX|2745|glutaredoxin (thioltransferase)	DQ892497|GLRX|2745|glutaredoxin (thioltransferase)	DQ895709|GLRX|2745|glutaredoxin (thioltransferase)	D21238|GLRX|2745|glutaredoxin (thioltransferase)	AF069668|GLRX|2745|glutaredoxin (thioltransferase)	BC106075|GLRX|2745|glutaredoxin (thioltransferase)	X76648|GLRX|2745|glutaredoxin (thioltransferase)	AK311868|GLRX|2745|glutaredoxin (thioltransferase)	BC005304|GLRX|2745|glutaredoxin (thioltransferase)	BC010965|GLRX|2745|glutaredoxin (thioltransferase)
hg19_v1_chr8_+_98703361_98703396	0.0494736	LHX3,4.p2	AK308030|MTDH|92140|metadherin
hg19_v1_chr6_+_139349818_139349857	0.0494152	LHX3,4.p2	NM_021243|C6orf115|58527|chromosome 6 open reading frame 115	AF161398|C6orf115|58527|chromosome 6 open reading frame 115
hg19_v1_chr5_+_36608430_36608563	0.0492673	LHX3,4.p2	NM_001166695|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	U03504|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AY954110|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg19_v1_chr1_-_155774769_155774814	0.0491597	LHX3,4.p2	AK315191|GON4L|54856|gon-4-like (C. elegans)	BC071650|GON4L|54856|gon-4-like (C. elegans)
hg19_v1_chr1_-_150738232_150738233	0.0488557	LHX3,4.p2	BC002642|CTSS|1520|cathepsin S
hg19_v1_chr17_-_39093671_39093835	0.0487218	LHX3,4.p2	BC028356|KRT23|25984|keratin 23 (histone deacetylase inducible)	AK302109|KRT23|25984|keratin 23 (histone deacetylase inducible)	AL117538|KRT23|25984|keratin 23 (histone deacetylase inducible)	NM_015515|KRT23|25984|keratin 23 (histone deacetylase inducible)
hg19_v1_chrX_+_41548225_41548310	0.0481314	LHX3,4.p2	AK027780|GPR34|2857|G protein-coupled receptor 34	NM_001097579|GPR34|2857|G protein-coupled receptor 34	NM_005300|GPR34|2857|G protein-coupled receptor 34	DQ106398|GPR34|2857|G protein-coupled receptor 34	DQ106400|GPR34|2857|G protein-coupled receptor 34	BC020678|GPR34|2857|G protein-coupled receptor 34	DQ106399|GPR34|2857|G protein-coupled receptor 34	DQ106401|GPR34|2857|G protein-coupled receptor 34	DQ106402|GPR34|2857|G protein-coupled receptor 34	AK075217|GPR34|2857|G protein-coupled receptor 34
hg19_v1_chr13_-_34250899_34250972	0.0477814	LHX3,4.p2	BX647695|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_001243476|STARD13|90627|StAR-related lipid transfer (START) domain containing 13
hg19_v1_chr8_-_110661007_110661131	0.047645	LHX3,4.p2	AL713645|SYBU|55638|syntabulin (syntaxin-interacting)	AB195676|SYBU|55638|syntabulin (syntaxin-interacting)	AB195677|SYBU|55638|syntabulin (syntaxin-interacting)	AB195678|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099747|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099748|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099749|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099750|SYBU|55638|syntabulin (syntaxin-interacting)	NM_017786|SYBU|55638|syntabulin (syntaxin-interacting)
hg19_v1_chr6_-_32908583_32908846	0.0475227	LHX3,4.p2	CR407606|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	DQ891141|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	DQ894320|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	BC027175|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	Z23139|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AB209577|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AK315979|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AK295872|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AY645722|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	U15085|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	NM_002118|HLA-DMB|3109|major histocompatibility complex, class II, DM beta
hg19_v1_chr4_-_23891608_23891699	0.0474631	LHX3,4.p2	AF159714|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AF186379|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AB061325|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AK296591|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AK309261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	BC029800|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AF106698|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	NM_013261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
hg19_v1_chr3_-_157213138_157213294	0.0472903	LHX3,4.p2	HQ258524|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	AL713656|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	BC101660|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	BC113555|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167917|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)
hg19_v1_chr7_+_28338939_28338939	0.0465653	LHX3,4.p2	L05913|CREB5|9586|cAMP responsive element binding protein 5	NM_182899|CREB5|9586|cAMP responsive element binding protein 5
hg19_v1_chr6_+_155538096_155538160	0.0462727	LHX3,4.p2	NM_001010927|TIAM2|26230|T-cell lymphoma invasion and metastasis 2	AK299723|TIAM2|26230|T-cell lymphoma invasion and metastasis 2	BC066979|TIAM2|26230|T-cell lymphoma invasion and metastasis 2	AF120324|TIAM2|26230|T-cell lymphoma invasion and metastasis 2	BC022469|TIAM2|26230|T-cell lymphoma invasion and metastasis 2
hg19_v1_chr16_-_71610948_71610997	0.0462304	LHX3,4.p2	X55675|TAT|6898|tyrosine aminotransferase	BC130534|TAT|6898|tyrosine aminotransferase	BC020707|TAT|6898|tyrosine aminotransferase	BC022292|TAT|6898|tyrosine aminotransferase	X52520|TAT|6898|tyrosine aminotransferase	AK313380|TAT|6898|tyrosine aminotransferase	NM_000353|TAT|6898|tyrosine aminotransferase
hg19_v1_chr4_+_71587674_71587767	0.0453506	LHX3,4.p2	NM_001037442|RUFY3|22902|RUN and FYVE domain containing 3	NM_014961|RUFY3|22902|RUN and FYVE domain containing 3	BC051716|RUFY3|22902|RUN and FYVE domain containing 3	BC053837|RUFY3|22902|RUN and FYVE domain containing 3	BC098433|RUFY3|22902|RUN and FYVE domain containing 3	AB020678|RUFY3|22902|RUN and FYVE domain containing 3	BC071988|RUFY3|22902|RUN and FYVE domain containing 3
hg19_v1_chr1_-_94147201_94147454	0.0450238	LHX3,4.p2	U92715|BCAR3|8412|breast cancer anti-estrogen resistance 3	BC039895|BCAR3|8412|breast cancer anti-estrogen resistance 3	AF124250|BCAR3|8412|breast cancer anti-estrogen resistance 3	NM_003567|BCAR3|8412|breast cancer anti-estrogen resistance 3
hg19_v1_chr7_+_129015483_129015483	0.0449476	LHX3,4.p2	AK316073|AHCYL2|23382|adenosylhomocysteinase-like 2	NM_001130722|AHCYL2|23382|adenosylhomocysteinase-like 2
hg19_v1_chr5_+_140792507_140792742	0.0447974	LHX3,4.p2	BC014509|PCDHGA10|56106|protocadherin gamma subfamily A, 10	BC093873|PCDHGA10|56106|protocadherin gamma subfamily A, 10	BC093875|PCDHGA10|56106|protocadherin gamma subfamily A, 10	AF152319|PCDHGA10|56106|protocadherin gamma subfamily A, 10	AF152503|PCDHGA10|56106|protocadherin gamma subfamily A, 10	NM_018913|PCDHGA10|56106|protocadherin gamma subfamily A, 10	NM_032090|PCDHGA10|56106|protocadherin gamma subfamily A, 10
hg19_v1_chr10_+_17270469_17270604	0.0446943	LHX3,4.p2	BC066956|VIM|7431|vimentin
hg19_v1_chr6_-_47253962_47254003	0.0440959	LHX3,4.p2	BC010241|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr13_+_50760015_50760091	0.0436103	LHX3,4.p2	
hg19_v1_chr21_-_43346780_43346798	0.0435441	LHX3,4.p2	BC062323|C2CD2|25966|C2 calcium-dependent domain containing 2	AL833323|C2CD2|25966|C2 calcium-dependent domain containing 2	NM_199050|C2CD2|25966|C2 calcium-dependent domain containing 2
hg19_v1_chr5_+_36606667_36606790	0.0433694	LHX3,4.p2	AK312304|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC037310|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK057823|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK293886|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC022285|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC054475|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK295032|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK295754|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	D26443|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	L19158|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg19_v1_chr10_-_52008312_52008369	0.0426982	LHX3,4.p2	AF250847|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2	BC107105|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2	AF449759|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2	NM_001143974|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2	NM_019893|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2
hg19_v1_chr10_-_29923900_29923914	0.0425187	LHX3,4.p2	AF109135|SVIL|6840|supervillin	NM_021738|SVIL|6840|supervillin
hg19_v1_chr2_+_132480063_132480063	0.0423985	LHX3,4.p2	AF038169|C2orf27A|29798|chromosome 2 open reading frame 27A	NM_013310|C2orf27A|29798|chromosome 2 open reading frame 27A
hg19_v1_chr8_-_122653493_122653760	0.0423623	LHX3,4.p2	BC109071|HAS2|3037|hyaluronan synthase 2	BC109072|HAS2|3037|hyaluronan synthase 2	NM_005328|HAS2|3037|hyaluronan synthase 2	U54804|HAS2|3037|hyaluronan synthase 2	AK297724|HAS2|3037|hyaluronan synthase 2
hg19_v1_chr11_-_124973204_124973204	0.0419304	LHX3,4.p2	NM_001080546|TMEM218|219854|transmembrane protein 218
hg19_v1_chr6_+_49518112_49518112	0.0417845	LHX3,4.p2	NM_001145652|C6orf141|135398|chromosome 6 open reading frame 141
hg19_v1_chr2_-_158300517_158300611	0.0417413	LHX3,4.p2	L06633|CYTIP|9595|cytohesin 1 interacting protein	AF068836|CYTIP|9595|cytohesin 1 interacting protein	BC036449|CYTIP|9595|cytohesin 1 interacting protein	AK312753|CYTIP|9595|cytohesin 1 interacting protein	NM_004288|CYTIP|9595|cytohesin 1 interacting protein
hg19_v1_chrX_+_100354797_100354797	0.0416348	LHX3,4.p2	NM_006733|CENPI|2491|centromere protein I	X97249|CENPI|2491|centromere protein I
hg19_v1_chrX_+_36254050_36254050	0.0413902	LHX3,4.p2	NM_001098843|CXorf30|645090|chromosome X open reading frame 30
hg19_v1_chr7_+_107110501_107110504	0.0406634	LHX3,4.p2	NM_005295|GPR22|2845|G protein-coupled receptor 22	AK122621|GPR22|2845|G protein-coupled receptor 22	AK307393|GPR22|2845|G protein-coupled receptor 22
hg19_v1_chrX_-_21776158_21776277	0.0403809	LHX3,4.p2	BC005948|SMPX|23676|small muscle protein, X-linked	AF129505|SMPX|23676|small muscle protein, X-linked	AJ250584|SMPX|23676|small muscle protein, X-linked	NM_014332|SMPX|23676|small muscle protein, X-linked	AK312134|SMPX|23676|small muscle protein, X-linked
hg19_v1_chr6_+_25754926_25754973	0.0402761	LHX3,4.p2	AK024903|SLC17A4|10050|solute carrier family 17 (sodium phosphate), member 4	NM_005495|SLC17A4|10050|solute carrier family 17 (sodium phosphate), member 4	AK293354|SLC17A4|10050|solute carrier family 17 (sodium phosphate), member 4
hg19_v1_chr8_-_29207795_29208346	0.0400011	LHX3,4.p2	EU831463|DUSP4|1846|dual specificity phosphatase 4	EU831550|DUSP4|1846|dual specificity phosphatase 4	S80632|DUSP4|1846|dual specificity phosphatase 4	U48807|DUSP4|1846|dual specificity phosphatase 4	BC002671|DUSP4|1846|dual specificity phosphatase 4	U21108|DUSP4|1846|dual specificity phosphatase 4	BC014565|DUSP4|1846|dual specificity phosphatase 4	AK314820|DUSP4|1846|dual specificity phosphatase 4	NM_001394|DUSP4|1846|dual specificity phosphatase 4
hg19_v1_chr5_+_166711842_166711842	0.0395214	LHX3,4.p2	NM_001122679|ODZ2|57451|odz, odd Oz/ten-m homolog 2 (Drosophila)
hg19_v1_chrX_-_13835313_13835318	0.0387442	LHX3,4.p2	NM_001001995|GPM6B|2824|glycoprotein M6B	NM_001001996|GPM6B|2824|glycoprotein M6B	NM_005278|GPM6B|2824|glycoprotein M6B
hg19_v1_chr1_+_44457424_44457628	0.0386895	LHX3,4.p2	AY487420|CCDC24|149473|coiled-coil domain containing 24
hg19_v1_chr9_-_215892_215892	0.0384344	LHX3,4.p2	NM_152569|C9orf66|157983|chromosome 9 open reading frame 66
hg19_v1_chr6_+_12717036_12717051	0.0382267	LHX3,4.p2	AK290017|PHACTR1|221692|phosphatase and actin regulator 1	NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1	NM_030948|PHACTR1|221692|phosphatase and actin regulator 1
hg19_v1_chr21_-_35899046_35899260	0.0372903	LHX3,4.p2	CR542065|RCAN1|1827|regulator of calcineurin 1	AK299444|RCAN1|1827|regulator of calcineurin 1	AK293293|RCAN1|1827|regulator of calcineurin 1	U85267|RCAN1|1827|regulator of calcineurin 1	NM_203418|RCAN1|1827|regulator of calcineurin 1
hg19_v1_chr4_+_169552752_169552840	0.0367908	LHX3,4.p2	NM_001166109|PALLD|23022|palladin, cytoskeletal associated protein	AK095512|PALLD|23022|palladin, cytoskeletal associated protein
hg19_v1_chr1_+_177140062_177140095	0.0367499	LHX3,4.p2	AK296524|FAM5B|57795|family with sequence similarity 5, member B
hg19_v1_chr8_+_92114846_92114872	0.0364661	LHX3,4.p2	AK097393|LRRC69|100130742|leucine rich repeat containing 69	NM_001129890|LRRC69|100130742|leucine rich repeat containing 69	AK130865|LRRC69|100130742|leucine rich repeat containing 69
hg19_v1_chr5_+_150399980_150400027	0.0363503	LHX3,4.p2	NM_002084|GPX3|2878|glutathione peroxidase 3 (plasma)
hg19_v1_chr3_-_15563160_15563276	0.0363344	LHX3,4.p2	BC126363|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	BC144004|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	BC074828|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	BC074829|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AY150334|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AY150335|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AY150336|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AY150337|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AY150338|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AY150339|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AJ225895|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AF057036|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	NM_005677|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	NM_080539|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AK289688|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
hg19_v1_chr3_-_141747434_141747506	0.0359027	LHX3,4.p2	AK303634|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	U18422|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	BC007976|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	AK303181|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_001178141|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_001178142|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_006286|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)
hg19_v1_chr8_-_102803196_102803204	0.0350794	LHX3,4.p2	AK055073|NCALD|83988|neurocalcin delta	AK314523|NCALD|83988|neurocalcin delta
hg19_v1_chr8_-_124749573_124749665	0.0347639	LHX3,4.p2	CR541838|ANXA13|312|annexin A13	BC125158|ANXA13|312|annexin A13	AJ306450|ANXA13|312|annexin A13	Z11502|ANXA13|312|annexin A13	NM_001003954|ANXA13|312|annexin A13	NM_004306|ANXA13|312|annexin A13	AK290281|ANXA13|312|annexin A13	AK223374|ANXA13|312|annexin A13
hg19_v1_chr4_+_113218498_113218557	0.0346919	LHX3,4.p2	NM_001102406|ALPK1|80216|alpha-kinase 1	NM_025144|ALPK1|80216|alpha-kinase 1	AK026323|ALPK1|80216|alpha-kinase 1	AK304708|ALPK1|80216|alpha-kinase 1	AK097246|ALPK1|80216|alpha-kinase 1	BC028117|ALPK1|80216|alpha-kinase 1	AK303489|ALPK1|80216|alpha-kinase 1	BX648798|ALPK1|80216|alpha-kinase 1	BC060780|ALPK1|80216|alpha-kinase 1
hg19_v1_chr1_+_244214576_244214591	0.0341575	LHX3,4.p2	AK291408|ZNF238|10472|zinc finger protein 238	AK293892|ZNF238|10472|zinc finger protein 238	BC036677|ZNF238|10472|zinc finger protein 238
hg19_v1_chr10_+_35426709_35426763	0.0341246	LHX3,4.p2	NM_183011|CREM|1390|cAMP responsive element modulator	NM_183012|CREM|1390|cAMP responsive element modulator
hg19_v1_chr8_-_62602285_62602407	0.0341234	LHX3,4.p2	AF184241|ASPH|444|aspartate beta-hydroxylase	AF306765|ASPH|444|aspartate beta-hydroxylase	AF224469|ASPH|444|aspartate beta-hydroxylase	BC144362|ASPH|444|aspartate beta-hydroxylase	BC144363|ASPH|444|aspartate beta-hydroxylase	AF224468|ASPH|444|aspartate beta-hydroxylase	AK304314|ASPH|444|aspartate beta-hydroxylase	AK295528|ASPH|444|aspartate beta-hydroxylase	NM_001164750|ASPH|444|aspartate beta-hydroxylase	NM_001164751|ASPH|444|aspartate beta-hydroxylase	NM_001164752|ASPH|444|aspartate beta-hydroxylase	NM_001164753|ASPH|444|aspartate beta-hydroxylase	NM_020164|ASPH|444|aspartate beta-hydroxylase	NM_032467|ASPH|444|aspartate beta-hydroxylase	NM_032468|ASPH|444|aspartate beta-hydroxylase
hg19_v1_chr7_+_112120907_112121065	0.0339599	LHX3,4.p2	NM_001134468|C7orf53|286006|chromosome 7 open reading frame 53	BC031976|C7orf53|286006|chromosome 7 open reading frame 53	AK096894|C7orf53|286006|chromosome 7 open reading frame 53	NM_182597|C7orf53|286006|chromosome 7 open reading frame 53
hg19_v1_chr1_-_35450928_35450951	0.0337056	LHX3,4.p2	NM_001195156|ZMYM6NB|100506144|ZMYM6 neighbor
hg19_v1_chr12_+_18414473_18414473	0.0334641	LHX3,4.p2	NM_004570|PIK3C2G|5288|phosphoinositide-3-kinase, class 2, gamma polypeptide
hg19_v1_chr9_-_112191105_112191322	0.0333552	LHX3,4.p2	AK296265|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3	AK296388|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3	AK316118|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3	NM_001145371|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3	NM_001145372|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3
hg19_v1_chr17_+_28268622_28268786	0.0332456	LHX3,4.p2	NM_198529|EFCAB5|374786|EF-hand calcium binding domain 5	BX648689|EFCAB5|374786|EF-hand calcium binding domain 5	BC137519|EFCAB5|374786|EF-hand calcium binding domain 5
hg19_v1_chr12_+_75784849_75784870	0.0330722	LHX3,4.p2	BC016749|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	AK093175|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2
hg19_v1_chr12_-_16757944_16758080	0.0325097	LHX3,4.p2	AB044745|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr9_+_130860816_130860835	0.0320253	LHX3,4.p2	NM_052901|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25	BC103930|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25	BC103931|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25	BC103932|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25	BC103933|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25	AJ619989|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25	AJ619992|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25	NM_001006643|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25
hg19_v1_chr19_+_7504573_7504573	0.0320197	LHX3,4.p2	AK127045|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18	NM_001130955|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18
hg19_v1_chr12_+_75784878_75784893	0.0319531	LHX3,4.p2	BX640916|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	BC029557|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	NM_152436|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	DQ891533|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	DQ894722|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2
hg19_v1_chrX_+_100224696_100224696	0.0316164	LHX3,4.p2	AK301813|ARL13A|392509|ADP-ribosylation factor-like 13A	NM_001012990|ARL13A|392509|ADP-ribosylation factor-like 13A	NM_001162490|ARL13A|392509|ADP-ribosylation factor-like 13A	NM_001162491|ARL13A|392509|ADP-ribosylation factor-like 13A
hg19_v1_chr3_-_55514933_55514955	0.0313239	LHX3,4.p2	BC074783|WNT5A|7474|wingless-type MMTV integration site family, member 5A
hg19_v1_chr9_-_75567915_75567976	0.0309794	LHX3,4.p2	AF003341|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1	AY390731|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1	BT006921|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1	DQ890669|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1	DQ893850|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1	BC001505|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1	AB209821|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1	AK000118|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1	AK026641|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1	AK302168|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1
hg19_v1_chr4_-_10041833_10042011	0.030968	LHX3,4.p2	AK310895|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9	BC018897|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9	NM_001001290|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9	AK096819|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9
hg19_v1_chr2_+_68961912_68962234	0.0307879	LHX3,4.p2	NM_001007231|ARHGAP25|9938|Rho GTPase activating protein 25	NM_001166277|ARHGAP25|9938|Rho GTPase activating protein 25	AK297056|ARHGAP25|9938|Rho GTPase activating protein 25	AK310742|ARHGAP25|9938|Rho GTPase activating protein 25	AK290396|ARHGAP25|9938|Rho GTPase activating protein 25
hg19_v1_chr22_-_26961333_26961369	0.0307773	LHX3,4.p2	AK075139|TPST2|8459|tyrosylprotein sulfotransferase 2	NM_001008566|TPST2|8459|tyrosylprotein sulfotransferase 2
hg19_v1_chr2_+_103378489_103378676	0.0306844	LHX3,4.p2	CR936735|TMEM182|130827|transmembrane protein 182	NM_144632|TMEM182|130827|transmembrane protein 182	CR936731|TMEM182|130827|transmembrane protein 182	CR936732|TMEM182|130827|transmembrane protein 182	AK129862|TMEM182|130827|transmembrane protein 182	BC130306|TMEM182|130827|transmembrane protein 182	BC130308|TMEM182|130827|transmembrane protein 182	HQ258113|TMEM182|130827|transmembrane protein 182
hg19_v1_chr9_+_130860769_130860794	0.0306232	LHX3,4.p2	BC089448|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25	AK290705|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25
hg19_v1_chr1_+_207262583_207262659	0.0302582	LHX3,4.p2	BC005378|C4BPB|725|complement component 4 binding protein, beta	NM_000716|C4BPB|725|complement component 4 binding protein, beta	NM_001017364|C4BPB|725|complement component 4 binding protein, beta	L11245|C4BPB|725|complement component 4 binding protein, beta	NM_001017367|C4BPB|725|complement component 4 binding protein, beta	AK315137|C4BPB|725|complement component 4 binding protein, beta
hg19_v1_chr12_+_12223872_12223894	0.0302452	LHX3,4.p2	AK292995|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)	BC025778|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)	NM_138723|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)	AK223415|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)
hg19_v1_chr3_-_187452669_187452694	0.0301322	LHX3,4.p2	EU139066|BCL6|604|B-cell CLL/lymphoma 6	NM_001134738|BCL6|604|B-cell CLL/lymphoma 6
hg19_v1_chr14_-_74025643_74025650	0.0300894	LHX3,4.p2	AK093515|HEATR4|399671|HEAT repeat containing 4	BC047590|HEATR4|399671|HEAT repeat containing 4	NM_001220484|HEATR4|399671|HEAT repeat containing 4	NM_203309|HEATR4|399671|HEAT repeat containing 4
hg19_v1_chr4_+_41614933_41615091	0.0300303	LHX3,4.p2	AK299835|LIMCH1|22998|LIM and calponin homology domains 1
hg19_v1_chr10_-_61900659_61900773	0.029915	LHX3,4.p2	AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v1_chr2_+_32502971_32502978	0.0298539	LHX3,4.p2	AK098486|YIPF4|84272|Yip1 domain family, member 4
hg19_v1_chr1_-_205744543_205744614	0.0295734	LHX3,4.p2	BC002585|RAB7L1|8934|RAB7, member RAS oncogene family-like 1	BX647960|RAB7L1|8934|RAB7, member RAS oncogene family-like 1	AK308359|RAB7L1|8934|RAB7, member RAS oncogene family-like 1	AK311085|RAB7L1|8934|RAB7, member RAS oncogene family-like 1	AK313000|RAB7L1|8934|RAB7, member RAS oncogene family-like 1	NM_001135662|RAB7L1|8934|RAB7, member RAS oncogene family-like 1	NM_001135663|RAB7L1|8934|RAB7, member RAS oncogene family-like 1	NM_001135664|RAB7L1|8934|RAB7, member RAS oncogene family-like 1	NM_003929|RAB7L1|8934|RAB7, member RAS oncogene family-like 1
hg19_v1_chr16_+_2732475_2732524	0.0295074	LHX3,4.p2	NM_018992|KCTD5|54442|potassium channel tetramerisation domain containing 5	AK000047|KCTD5|54442|potassium channel tetramerisation domain containing 5
hg19_v1_chr9_+_97521930_97522065	0.0294432	LHX3,4.p2	NM_001193329|C9orf3|84909|chromosome 9 open reading frame 3	AJ560639|C9orf3|84909|chromosome 9 open reading frame 3
hg19_v1_chr16_-_21436657_21436657	0.0293206	LHX3,4.p2	BC036263|NPIPL3|23117|nuclear pore complex interacting protein-like 3	NM_130464|NPIPL3|23117|nuclear pore complex interacting protein-like 3
hg19_v1_chr5_+_36606456_36606456	0.0293125	LHX3,4.p2	NM_001166696|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	NM_004172|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg19_v1_chr19_+_39155209_39155341	0.0290857	LHX3,4.p2	
hg19_v1_chr1_-_35450902_35450919	0.0289596	LHX3,4.p2	BC029439|ZMYM6NB|100506144|ZMYM6 neighbor
hg19_v1_chr1_+_84630575_84630648	0.0287554	LHX3,4.p2	AY927366|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AY927367|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AY927368|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AK091420|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242860|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242861|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta
hg19_v1_chr2_-_200213802_200213898	0.0285704	LHX3,4.p2	AK025127|SATB2|23314|SATB homeobox 2
hg19_v1_chr18_+_21269528_21269647	0.0282688	LHX3,4.p2	BC093406|LAMA3|3909|laminin, alpha 3	NM_001127717|LAMA3|3909|laminin, alpha 3	NM_198129|LAMA3|3909|laminin, alpha 3	AY327115|LAMA3|3909|laminin, alpha 3	AY327116|LAMA3|3909|laminin, alpha 3
hg19_v1_chr20_-_6104056_6104271	0.0281831	LHX3,4.p2	AB105105|FERMT1|55612|fermitin family member 1	NM_017671|FERMT1|55612|fermitin family member 1
hg19_v1_chr19_+_46498338_46498338	0.0281579	LHX3,4.p2	NM_001080402|CCDC61|729440|coiled-coil domain containing 61
hg19_v1_chr1_+_198608136_198608210	0.0281038	LHX3,4.p2	NM_002838|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	NM_080921|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	NM_080923|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK308217|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK310898|PTPRC|5788|protein tyrosine phosphatase, receptor type, C
hg19_v1_chr9_-_15250113_15250197	0.0279998	LHX3,4.p2	AK301427|TTC39B|158219|tetratricopeptide repeat domain 39B	NM_001168342|TTC39B|158219|tetratricopeptide repeat domain 39B
hg19_v1_chr1_-_35450923_35450927	0.0279351	LHX3,4.p2	AK129824|ZMYM6NB|100506144|ZMYM6 neighbor
hg19_v1_chr15_+_93443418_93443555	0.027922	LHX3,4.p2	AF006514|CHD2|1106|chromodomain helicase DNA binding protein 2	NM_001042572|CHD2|1106|chromodomain helicase DNA binding protein 2	NM_001271|CHD2|1106|chromodomain helicase DNA binding protein 2	AK292850|CHD2|1106|chromodomain helicase DNA binding protein 2	BC107885|CHD2|1106|chromodomain helicase DNA binding protein 2
hg19_v1_chrX_-_115594136_115594163	0.0278661	LHX3,4.p2	BC062223|CXorf61|203413|chromosome X open reading frame 61	NM_001017978|CXorf61|203413|chromosome X open reading frame 61	AK000618|CXorf61|203413|chromosome X open reading frame 61	AK026566|CXorf61|203413|chromosome X open reading frame 61
hg19_v1_chr15_+_100173182_100173356	0.0277569	LHX3,4.p2	NM_001130928|MEF2A|4205|myocyte enhancer factor 2A	BC053871|MEF2A|4205|myocyte enhancer factor 2A	AM392739|MEF2A|4205|myocyte enhancer factor 2A	AM393856|MEF2A|4205|myocyte enhancer factor 2A	EU446488|MEF2A|4205|myocyte enhancer factor 2A
hg19_v1_chr2_-_224866616_224866641	0.0275374	LHX3,4.p2	M17783|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2	DQ893191|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2	DQ893684|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2	DQ893685|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2	DQ896516|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2	DQ896862|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2	DQ896863|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2
hg19_v1_chr12_+_56414688_56414831	0.027519	LHX3,4.p2	NM_022465|IKZF4|64375|IKAROS family zinc finger 4 (Eos)	AK122880|IKZF4|64375|IKAROS family zinc finger 4 (Eos)
hg19_v1_chr6_+_130339715_130339735	0.0273966	LHX3,4.p2	AK094137|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	NM_001007102|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	NM_032438|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	BC060845|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	AK290219|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)
hg19_v1_chrX_-_107682600_107682726	0.0272357	LHX3,4.p2	BT007228|COL4A6|1288|collagen, type IV, alpha 6	L22763|COL4A6|1288|collagen, type IV, alpha 6	U04845|COL4A6|1288|collagen, type IV, alpha 6	NM_001847|COL4A6|1288|collagen, type IV, alpha 6	BC005305|COL4A6|1288|collagen, type IV, alpha 6
hg19_v1_chr2_+_182850550_182850748	0.0268332	LHX3,4.p2	NM_001080545|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK129898|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AF494535|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BX647581|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BC017943|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C
hg19_v1_chr7_+_18548963_18548975	0.0265956	LHX3,4.p2	AK304343|HDAC9|9734|histone deacetylase 9
hg19_v1_chr12_-_57693146_57693218	0.0263033	LHX3,4.p2	
hg19_v1_chr10_-_69752385_69752431	0.0262261	LHX3,4.p2	AK027835|HERC4|26091|hect domain and RLD 4
hg19_v1_chr19_+_41430123_41430177	0.0260736	LHX3,4.p2	AK307933|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1	AK310944|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1	BC041174|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1	M29873|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1	DQ198366|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1	DQ198367|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1
hg19_v1_chr3_+_195447751_195447760	0.0260058	LHX3,4.p2	NM_152673|MUC20|200958|mucin 20, cell surface associated	AK311504|MUC20|200958|mucin 20, cell surface associated
hg19_v1_chr16_+_2732526_2732656	0.0259404	LHX3,4.p2	BC007314|KCTD5|54442|potassium channel tetramerisation domain containing 5
hg19_v1_chr1_-_91182777_91182793	0.0259047	LHX3,4.p2	BC126439|BARHL2|343472|BarH-like homeobox 2	BC126441|BARHL2|343472|BarH-like homeobox 2	AY338397|BARHL2|343472|BarH-like homeobox 2	NM_020063|BARHL2|343472|BarH-like homeobox 2
hg19_v1_chr4_+_88571453_88571458	0.0259045	LHX3,4.p2	NM_001079911|DMP1|1758|dentin matrix acidic phosphoprotein 1	NM_004407|DMP1|1758|dentin matrix acidic phosphoprotein 1	U65378|DMP1|1758|dentin matrix acidic phosphoprotein 1	U89012|DMP1|1758|dentin matrix acidic phosphoprotein 1
hg19_v1_chr11_-_85437457_85437510	0.0258576	LHX3,4.p2	BX647671|SYTL2|54843|synaptotagmin-like 2	AK127504|SYTL2|54843|synaptotagmin-like 2	NM_206927|SYTL2|54843|synaptotagmin-like 2	NM_206928|SYTL2|54843|synaptotagmin-like 2
hg19_v1_chr8_-_101315457_101315486	0.02522	LHX3,4.p2	AB271913|RNF19A|25897|ring finger protein 19A	AB029316|RNF19A|25897|ring finger protein 19A	NM_015435|RNF19A|25897|ring finger protein 19A
hg19_v1_chr7_+_90339146_90339175	0.0250267	LHX3,4.p2	AK295086|CDK14|5218|cyclin-dependent kinase 14	AK296406|CDK14|5218|cyclin-dependent kinase 14	AK307484|CDK14|5218|cyclin-dependent kinase 14	AK316026|CDK14|5218|cyclin-dependent kinase 14
hg19_v1_chr10_-_74283693_74283746	0.0246938	LHX3,4.p2	AK298347|MICU1|10367|mitochondrial calcium uptake 1	AK296086|MICU1|10367|mitochondrial calcium uptake 1	NM_001195519|MICU1|10367|mitochondrial calcium uptake 1
hg19_v1_chr18_+_32173281_32173328	0.0245038	LHX3,4.p2	NM_001128175|DTNA|1837|dystrobrevin, alpha	NM_001198938|DTNA|1837|dystrobrevin, alpha	NM_001198939|DTNA|1837|dystrobrevin, alpha	NM_001198940|DTNA|1837|dystrobrevin, alpha	AK308410|DTNA|1837|dystrobrevin, alpha	AL833285|DTNA|1837|dystrobrevin, alpha	BC005300|DTNA|1837|dystrobrevin, alpha	AB209102|DTNA|1837|dystrobrevin, alpha
hg19_v1_chr11_+_101918168_101918198	0.0244688	LHX3,4.p2	NM_001195005|C11orf70|85016|chromosome 11 open reading frame 70	NM_032930|C11orf70|85016|chromosome 11 open reading frame 70	AK094851|C11orf70|85016|chromosome 11 open reading frame 70	BC054869|C11orf70|85016|chromosome 11 open reading frame 70	BC006128|C11orf70|85016|chromosome 11 open reading frame 70
hg19_v1_chr11_-_83984230_83984322	0.0243975	LHX3,4.p2	AK294375|DLG2|1740|discs, large homolog 2 (Drosophila)	AK126776|DLG2|1740|discs, large homolog 2 (Drosophila)	AK295624|DLG2|1740|discs, large homolog 2 (Drosophila)	NM_001142700|DLG2|1740|discs, large homolog 2 (Drosophila)
hg19_v1_chr6_+_26087447_26087707	0.0242993	LHX3,4.p2	U60319|HFE|3077|hemochromatosis	AJ249335|HFE|3077|hemochromatosis	AJ249336|HFE|3077|hemochromatosis	AJ249337|HFE|3077|hemochromatosis	AJ249338|HFE|3077|hemochromatosis	AJ250635|HFE|3077|hemochromatosis	NM_000410|HFE|3077|hemochromatosis	NM_139003|HFE|3077|hemochromatosis	NM_139004|HFE|3077|hemochromatosis	NM_139006|HFE|3077|hemochromatosis	NM_139007|HFE|3077|hemochromatosis	NM_139008|HFE|3077|hemochromatosis	NM_139009|HFE|3077|hemochromatosis	NM_139010|HFE|3077|hemochromatosis	NM_139011|HFE|3077|hemochromatosis	AF144242|HFE|3077|hemochromatosis	AF144243|HFE|3077|hemochromatosis	AF144244|HFE|3077|hemochromatosis	AF144245|HFE|3077|hemochromatosis	BC074721|HFE|3077|hemochromatosis	AF149804|HFE|3077|hemochromatosis	AF150664|HFE|3077|hemochromatosis	AF079407|HFE|3077|hemochromatosis	AF079408|HFE|3077|hemochromatosis	AF079409|HFE|3077|hemochromatosis	BC117201|HFE|3077|hemochromatosis	BC117203|HFE|3077|hemochromatosis	BC143887|HFE|3077|hemochromatosis	AK293393|HFE|3077|hemochromatosis	AK316502|HFE|3077|hemochromatosis	AF115265|HFE|3077|hemochromatosis	AF115264|HFE|3077|hemochromatosis	AK300933|HFE|3077|hemochromatosis	HQ258197|HFE|3077|hemochromatosis	JN375754|HFE|3077|hemochromatosis
hg19_v1_chr17_-_63009302_63009310	0.0240296	LHX3,4.p2	AK026902|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13
hg19_v1_chr14_-_35344852_35344852	0.0237427	LHX3,4.p2	AB032252|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A	NM_013448|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A	NM_182648|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg19_v1_chr14_+_45366426_45366571	0.023646	LHX3,4.p2	NM_001017923|C14orf28|122525|chromosome 14 open reading frame 28	BC105030|C14orf28|122525|chromosome 14 open reading frame 28	BC105032|C14orf28|122525|chromosome 14 open reading frame 28	AF250395|C14orf28|122525|chromosome 14 open reading frame 28
hg19_v1_chr1_-_213020947_213020990	0.0235978	LHX3,4.p2	AY640234|C1orf227|149643|chromosome 1 open reading frame 227	BC035742|C1orf227|149643|chromosome 1 open reading frame 227	NM_001024601|C1orf227|149643|chromosome 1 open reading frame 227
hg19_v1_chr5_+_40841296_40841589	0.0235662	LHX3,4.p2	AF356193|CARD6|84674|caspase recruitment domain family, member 6	AY196783|CARD6|84674|caspase recruitment domain family, member 6	NM_032587|CARD6|84674|caspase recruitment domain family, member 6	BC093825|CARD6|84674|caspase recruitment domain family, member 6	AK304349|CARD6|84674|caspase recruitment domain family, member 6	AB209844|CARD6|84674|caspase recruitment domain family, member 6
hg19_v1_chrM_-_379_715	0.0233416	LHX3,4.p2	
hg19_v1_chr15_-_31947541_31947541	0.0230945	LHX3,4.p2	AJ430383|OTUD7A|161725|OTU domain containing 7A	NM_130901|OTUD7A|161725|OTU domain containing 7A
hg19_v1_chr16_-_3627353_3627446	0.0225029	LHX3,4.p2	AY601811|NLRC3|197358|NLR family, CARD domain containing 3	NM_178844|NLRC3|197358|NLR family, CARD domain containing 3	AK090431|NLRC3|197358|NLR family, CARD domain containing 3	AK090476|NLRC3|197358|NLR family, CARD domain containing 3
hg19_v1_chrX_-_21676416_21676447	0.0224978	LHX3,4.p2	BC109031|KLHL34|257240|kelch-like 34 (Drosophila)	AK092279|KLHL34|257240|kelch-like 34 (Drosophila)	NM_153270|KLHL34|257240|kelch-like 34 (Drosophila)
hg19_v1_chr1_-_110950489_110950563	0.0224943	LHX3,4.p2	HQ257924|HBXIP|10542|hepatitis B virus x interacting protein	NM_006402|HBXIP|10542|hepatitis B virus x interacting protein	BC062619|HBXIP|10542|hepatitis B virus x interacting protein
hg19_v1_chr14_+_29236171_29236286	0.0224424	LHX3,4.p2	X74142|FOXG1|2290|forkhead box G1	X74143|FOXG1|2290|forkhead box G1	NM_005249|FOXG1|2290|forkhead box G1
hg19_v1_chr17_-_7218370_7218664	0.0223284	LHX3,4.p2	BT006998|GPS2|2874|G protein pathway suppressor 2	CR541723|GPS2|2874|G protein pathway suppressor 2	CR541750|GPS2|2874|G protein pathway suppressor 2	BC014192|GPS2|2874|G protein pathway suppressor 2	BC013652|GPS2|2874|G protein pathway suppressor 2	NM_004489|GPS2|2874|G protein pathway suppressor 2
hg19_v1_chr6_+_29855349_29855474	0.0221939	LHX3,4.p2	AK299998|HLA-H|3136|major histocompatibility complex, class I, H (pseudogene)	AK090500|HLA-H|3136|major histocompatibility complex, class I, H (pseudogene)	AK308374|HLA-H|3136|major histocompatibility complex, class I, H (pseudogene)
hg19_v1_chr4_+_41614725_41614803	0.0221848	LHX3,4.p2	AK294774|LIMCH1|22998|LIM and calponin homology domains 1
hg19_v1_chr7_-_126883568_126883568	0.0221402	LHX3,4.p2	NM_000845|GRM8|2918|glutamate receptor, metabotropic 8
hg19_v1_chr1_+_206317458_206317605	0.022084	LHX3,4.p2	NM_001910|CTSE|1510|cathepsin E	NM_148964|CTSE|1510|cathepsin E	AJ250716|CTSE|1510|cathepsin E	AJ250717|CTSE|1510|cathepsin E	BC042537|CTSE|1510|cathepsin E	J05036|CTSE|1510|cathepsin E	AK292057|CTSE|1510|cathepsin E	AK298069|CTSE|1510|cathepsin E
hg19_v1_chr1_-_150738292_150738432	0.0220019	LHX3,4.p2	AK226095|CTSS|1520|cathepsin S	M90696|CTSS|1520|cathepsin S	NM_001199739|CTSS|1520|cathepsin S	NM_004079|CTSS|1520|cathepsin S
hg19_v1_chrX_+_50027539_50027539	0.0218999	LHX3,4.p2	AJ314764|CCNB3|85417|cyclin B3	AJ314765|CCNB3|85417|cyclin B3	AJ314766|CCNB3|85417|cyclin B3	AJ416458|CCNB3|85417|cyclin B3	NM_033031|CCNB3|85417|cyclin B3	NM_033670|CCNB3|85417|cyclin B3
hg19_v1_chr10_+_102732285_102732285	0.0216656	LHX3,4.p2	NM_001203244|SEMA4G|57715|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G	NM_017893|SEMA4G|57715|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
hg19_v1_chr9_-_85882093_85882201	0.0215724	LHX3,4.p2	GQ129452|FRMD3|257019|FERM domain containing 3	BC023560|FRMD3|257019|FERM domain containing 3	NM_001244962|FRMD3|257019|FERM domain containing 3
hg19_v1_chr12_-_52225700_52225700	0.0215197	LHX3,4.p2	AK129980|FIGNL2|401720|fidgetin-like 2	NM_001013690|FIGNL2|401720|fidgetin-like 2
hg19_v1_chr7_+_138818489_138818567	0.0213028	LHX3,4.p2	NM_001144920|TTC26|79989|tetratricopeptide repeat domain 26	NM_001144923|TTC26|79989|tetratricopeptide repeat domain 26	NM_024926|TTC26|79989|tetratricopeptide repeat domain 26	AK295092|TTC26|79989|tetratricopeptide repeat domain 26	AK022633|TTC26|79989|tetratricopeptide repeat domain 26	AK300807|TTC26|79989|tetratricopeptide repeat domain 26	BC013912|TTC26|79989|tetratricopeptide repeat domain 26	AL137393|TTC26|79989|tetratricopeptide repeat domain 26	AK299132|TTC26|79989|tetratricopeptide repeat domain 26	BC034466|TTC26|79989|tetratricopeptide repeat domain 26	BC126331|TTC26|79989|tetratricopeptide repeat domain 26	BC130339|TTC26|79989|tetratricopeptide repeat domain 26	BC144151|TTC26|79989|tetratricopeptide repeat domain 26	AK293444|TTC26|79989|tetratricopeptide repeat domain 26
hg19_v1_chr1_+_206643830_206643860	0.0211916	LHX3,4.p2	BC105923|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon	BC105924|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon	BC107591|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon	BC107812|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon	D63485|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon
hg19_v1_chr11_-_5701371_5701461	0.0208891	LHX3,4.p2	AB362928|TRIM5|85363|tripartite motif containing 5	AY625000|TRIM5|85363|tripartite motif containing 5	DQ288685|TRIM5|85363|tripartite motif containing 5	AF220025|TRIM5|85363|tripartite motif containing 5	AF220026|TRIM5|85363|tripartite motif containing 5	AF220027|TRIM5|85363|tripartite motif containing 5	AF220028|TRIM5|85363|tripartite motif containing 5	AF220029|TRIM5|85363|tripartite motif containing 5
hg19_v1_chr19_+_663381_663481	0.0208531	LHX3,4.p2	
hg19_v1_chr2_+_135596185_135596252	0.0208238	LHX3,4.p2	AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase	NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase	BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase	BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase	AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase
hg19_v1_chr12_-_102874299_102874306	0.0208002	LHX3,4.p2	BC152321|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	M27544|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg19_v1_chr3_-_124930192_124930242	0.0204637	LHX3,4.p2	AF345197|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	HQ258349|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	BC126158|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	BC126160|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	AF390442|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	NM_001195483|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8
hg19_v1_chr12_-_46633551_46633675	0.020428	LHX3,4.p2	AK074851|SLC38A1|81539|solute carrier family 38, member 1	DQ891017|SLC38A1|81539|solute carrier family 38, member 1	EU176550|SLC38A1|81539|solute carrier family 38, member 1	AK074949|SLC38A1|81539|solute carrier family 38, member 1	AK313731|SLC38A1|81539|solute carrier family 38, member 1
hg19_v1_chr7_+_91924291_91924419	0.0202302	LHX3,4.p2	
hg19_v1_chr22_-_38881529_38881541	0.020052	LHX3,4.p2	BC045747|DDX17|10521|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17
hg19_v1_chr8_-_38326351_38326351	0.0199979	LHX3,4.p2	FJ809916|FGFR1|2260|fibroblast growth factor receptor 1	FJ809917|FGFR1|2260|fibroblast growth factor receptor 1	NM_001174063|FGFR1|2260|fibroblast growth factor receptor 1	NM_001174064|FGFR1|2260|fibroblast growth factor receptor 1	NM_015850|FGFR1|2260|fibroblast growth factor receptor 1	NM_023105|FGFR1|2260|fibroblast growth factor receptor 1	NM_023106|FGFR1|2260|fibroblast growth factor receptor 1	NM_023110|FGFR1|2260|fibroblast growth factor receptor 1
hg19_v1_chrM_+_5769_6092	0.019867	LHX3,4.p2	
hg19_v1_chr12_-_102874373_102874391	0.0198546	LHX3,4.p2	AB209184|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_000618|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111283|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111285|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg19_v1_chr6_-_169654047_169654181	0.019684	LHX3,4.p2	L12350|THBS2|7058|thrombospondin 2	NM_003247|THBS2|7058|thrombospondin 2	AK292429|THBS2|7058|thrombospondin 2
hg19_v1_chrM_+_10704_11421	0.0196617	LHX3,4.p2	
hg19_v1_chr14_-_23504353_23504428	0.0194749	LHX3,4.p2	NM_001144932|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5	NM_002797|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5	NM_001130725|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5
hg19_v1_chr18_+_33234532_33234626	0.0194225	LHX3,4.p2	NM_020474|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)	BC047746|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)	U41514|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)	X85018|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)
hg19_v1_chr1_+_57320442_57320574	0.0193064	LHX3,4.p2	NM_000562|C8A|731|complement component 8, alpha polypeptide	AK309596|C8A|731|complement component 8, alpha polypeptide	BC020702|C8A|731|complement component 8, alpha polypeptide	BC132911|C8A|731|complement component 8, alpha polypeptide	BC132913|C8A|731|complement component 8, alpha polypeptide	HQ258328|C8A|731|complement component 8, alpha polypeptide
hg19_v1_chr3_-_71778268_71778268	0.0192629	LHX3,4.p2	NM_001134650|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3
hg19_v1_chr3_-_114478117_114478123	0.0192151	LHX3,4.p2	AK225788|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164344|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164345|ZBTB20|26137|zinc finger and BTB domain containing 20
hg19_v1_chrX_-_110655384_110655459	0.019209	LHX3,4.p2	AF040254|DCX|1641|doublecortin	AF040255|DCX|1641|doublecortin	BC027925|DCX|1641|doublecortin	AK290455|DCX|1641|doublecortin	AK299822|DCX|1641|doublecortin	NM_178151|DCX|1641|doublecortin	NM_001195553|DCX|1641|doublecortin	NM_178152|DCX|1641|doublecortin	NM_178153|DCX|1641|doublecortin
hg19_v1_chr12_+_57157091_57157131	0.0191587	LHX3,4.p2	AK313423|HSD17B6|8630|hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse)	BC020710|HSD17B6|8630|hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse)	NM_003725|HSD17B6|8630|hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse)	U89281|HSD17B6|8630|hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse)	AF223225|HSD17B6|8630|hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse)
hg19_v1_chr11_-_67141647_67141647	0.0190763	LHX3,4.p2	AK298052|CLCF1|23529|cardiotrophin-like cytokine factor 1	NM_001166212|CLCF1|23529|cardiotrophin-like cytokine factor 1
hg19_v1_chr8_+_128748476_128748505	0.0190734	LHX3,4.p2	AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)
hg19_v1_chr2_-_163695239_163695256	0.0189664	LHX3,4.p2	BC035815|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7	NM_033272|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7	NM_173162|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7
hg19_v1_chrX_-_24690740_24690978	0.0189128	LHX3,4.p2	BC045634|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AK296333|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AK226121|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_001163264|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg19_v1_chr2_-_175712276_175712345	0.0188589	LHX3,4.p2	AK055060|CHN1|1123|chimerin (chimaerin) 1	NM_001206602|CHN1|1123|chimerin (chimaerin) 1
hg19_v1_chr3_+_39424766_39425215	0.0188409	LHX3,4.p2	NM_017875|SLC25A38|54977|solute carrier family 25, member 38	AK000558|SLC25A38|54977|solute carrier family 25, member 38	AK225388|SLC25A38|54977|solute carrier family 25, member 38	BC013194|SLC25A38|54977|solute carrier family 25, member 38	CR457242|SLC25A38|54977|solute carrier family 25, member 38
hg19_v1_chr6_-_144385647_144385734	0.0187722	LHX3,4.p2	EF100438|PLAGL1|5325|pleiomorphic adenoma gene-like 1	EF100439|PLAGL1|5325|pleiomorphic adenoma gene-like 1	EF100440|PLAGL1|5325|pleiomorphic adenoma gene-like 1	EF100441|PLAGL1|5325|pleiomorphic adenoma gene-like 1	EF100442|PLAGL1|5325|pleiomorphic adenoma gene-like 1	EF100443|PLAGL1|5325|pleiomorphic adenoma gene-like 1	EF100444|PLAGL1|5325|pleiomorphic adenoma gene-like 1	EF100445|PLAGL1|5325|pleiomorphic adenoma gene-like 1	NM_001080951|PLAGL1|5325|pleiomorphic adenoma gene-like 1	NM_001080955|PLAGL1|5325|pleiomorphic adenoma gene-like 1
hg19_v1_chr1_-_89664510_89664632	0.0187293	LHX3,4.p2	AK304245|GBP4|115361|guanylate binding protein 4	AF288814|GBP4|115361|guanylate binding protein 4	AK131094|GBP4|115361|guanylate binding protein 4	AL832576|GBP4|115361|guanylate binding protein 4	BC070055|GBP4|115361|guanylate binding protein 4	BC017889|GBP4|115361|guanylate binding protein 4	AK312417|GBP4|115361|guanylate binding protein 4	BC008421|GBP4|115361|guanylate binding protein 4	NM_052941|GBP4|115361|guanylate binding protein 4
hg19_v1_chr2_+_234627423_234627474	0.0187246	LHX3,4.p2	AK313623|UGT1A4|54657|UDP glucuronosyltransferase 1 family, polypeptide A4	M57951|UGT1A4|54657|UDP glucuronosyltransferase 1 family, polypeptide A4	NM_007120|UGT1A4|54657|UDP glucuronosyltransferase 1 family, polypeptide A4	BC139784|UGT1A4|54657|UDP glucuronosyltransferase 1 family, polypeptide A4	AY435139|UGT1A4|54657|UDP glucuronosyltransferase 1 family, polypeptide A4	BC121036|UGT1A4|54657|UDP glucuronosyltransferase 1 family, polypeptide A4	BC131623|UGT1A4|54657|UDP glucuronosyltransferase 1 family, polypeptide A4
hg19_v1_chr12_+_93130264_93130310	0.0182833	LHX3,4.p2	NM_001004330|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7	AK128530|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7
hg19_v1_chr17_-_49124128_49124328	0.0182445	LHX3,4.p2	BC007524|SPAG9|9043|sperm associated antigen 9	BC059946|SPAG9|9043|sperm associated antigen 9	AK299553|SPAG9|9043|sperm associated antigen 9	AK307793|SPAG9|9043|sperm associated antigen 9	AK295098|SPAG9|9043|sperm associated antigen 9	AK309214|SPAG9|9043|sperm associated antigen 9	AK024068|SPAG9|9043|sperm associated antigen 9	NM_001251971|SPAG9|9043|sperm associated antigen 9
hg19_v1_chr16_-_30934437_30934589	0.0182305	LHX3,4.p2	BC101464|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)	BC101988|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)	BC105687|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)	BC105926|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)	AK092263|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)
hg19_v1_chr7_-_37488408_37488529	0.0180772	LHX3,4.p2	AL136787|ELMO1|9844|engulfment and cell motility 1	AK001084|ELMO1|9844|engulfment and cell motility 1	AK314349|ELMO1|9844|engulfment and cell motility 1
hg19_v1_chr15_-_43877043_43877090	0.0178593	LHX3,4.p2	AF543190|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1	AF502586|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1	AF502588|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1	NM_014659|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1	AB002375|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1	AF502587|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1	AF502589|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1
hg19_v1_chr1_+_63063186_63063237	0.0176787	LHX3,4.p2	NM_014495|ANGPTL3|27329|angiopoietin-like 3	AK315304|ANGPTL3|27329|angiopoietin-like 3	AK289426|ANGPTL3|27329|angiopoietin-like 3	BC007059|ANGPTL3|27329|angiopoietin-like 3	BC058287|ANGPTL3|27329|angiopoietin-like 3	AY358273|ANGPTL3|27329|angiopoietin-like 3	AF152562|ANGPTL3|27329|angiopoietin-like 3
hg19_v1_chr5_+_140235594_140235633	0.0175178	LHX3,4.p2	BC130447|PCDHA10|56139|protocadherin alpha 10	AF152306|PCDHA10|56139|protocadherin alpha 10	AF152475|PCDHA10|56139|protocadherin alpha 10	AF169689|PCDHA10|56139|protocadherin alpha 10	HQ258585|PCDHA10|56139|protocadherin alpha 10	NM_018901|PCDHA10|56139|protocadherin alpha 10	NM_031859|PCDHA10|56139|protocadherin alpha 10	NM_031860|PCDHA10|56139|protocadherin alpha 10
hg19_v1_chr7_-_27166638_27166638	0.0172363	LHX3,4.p2	AK056567|HOXA3|3200|homeobox A3	NM_153631|HOXA3|3200|homeobox A3
hg19_v1_chr7_-_107643330_107643880	0.0171639	LHX3,4.p2	BC113455|LAMB1|3912|laminin, beta 1	M61916|LAMB1|3912|laminin, beta 1	BX648251|LAMB1|3912|laminin, beta 1	AK303501|LAMB1|3912|laminin, beta 1	AK309921|LAMB1|3912|laminin, beta 1	AK307611|LAMB1|3912|laminin, beta 1	BC044633|LAMB1|3912|laminin, beta 1	BC052598|LAMB1|3912|laminin, beta 1	NM_002291|LAMB1|3912|laminin, beta 1
hg19_v1_chr10_+_24755440_24755448	0.0171182	LHX3,4.p2	AK300422|KIAA1217|56243|KIAA1217
hg19_v1_chr15_-_41166336_41166558	0.0168508	LHX3,4.p2	AY059636|RHOV|171177|ras homolog gene family, member V	BC112945|RHOV|171177|ras homolog gene family, member V	BC019353|RHOV|171177|ras homolog gene family, member V	BC105020|RHOV|171177|ras homolog gene family, member V	BC105022|RHOV|171177|ras homolog gene family, member V	AB079131|RHOV|171177|ras homolog gene family, member V	NM_133639|RHOV|171177|ras homolog gene family, member V
hg19_v1_chr12_-_102872329_102872428	0.0167791	LHX3,4.p2	M37484|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111284|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg19_v1_chr9_+_124329398_124329398	0.0167587	LHX3,4.p2	NM_032552|DAB2IP|153090|DAB2 interacting protein
hg19_v1_chr3_-_149095333_149095399	0.0167339	LHX3,4.p2	CR456953|TM4SF1|4071|transmembrane 4 L six family member 1	BC010166|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr12_+_80838125_80838125	0.0167253	LHX3,4.p2	NM_001145026|PTPRQ|374462|protein tyrosine phosphatase, receptor type, Q
hg19_v1_chr4_+_187070326_187070391	0.0166005	LHX3,4.p2	NM_001006655|FAM149A|25854|family with sequence similarity 149, member A	AF173894|FAM149A|25854|family with sequence similarity 149, member A
hg19_v1_chr15_-_75194542_75194610	0.0165353	LHX3,4.p2	AK025373|C15orf17|57184|chromosome 15 open reading frame 17
hg19_v1_chr2_-_99279935_99279935	0.0164265	LHX3,4.p2	AK304393|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A	AK309852|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A	NM_001160154|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg19_v1_chr12_-_58135853_58135943	0.0163695	LHX3,4.p2	AF413077|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2	BC028020|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2	AK292672|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2	AF384128|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2	D79989|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2	NM_014770|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2
hg19_v1_chr11_-_118123001_118123100	0.0162337	LHX3,4.p2	HQ258603|MPZL3|196264|myelin protein zero-like 3	AY358626|MPZL3|196264|myelin protein zero-like 3	NM_198275|MPZL3|196264|myelin protein zero-like 3	AK095399|MPZL3|196264|myelin protein zero-like 3	AK289390|MPZL3|196264|myelin protein zero-like 3	AK296951|MPZL3|196264|myelin protein zero-like 3	BC031223|MPZL3|196264|myelin protein zero-like 3	AK304292|MPZL3|196264|myelin protein zero-like 3	AK310966|MPZL3|196264|myelin protein zero-like 3	BC113586|MPZL3|196264|myelin protein zero-like 3	BC143897|MPZL3|196264|myelin protein zero-like 3
hg19_v1_chr5_-_95158465_95158576	0.0161964	LHX3,4.p2	NM_001118890|GLRX|2745|glutaredoxin (thioltransferase)	NM_001243658|GLRX|2745|glutaredoxin (thioltransferase)	NM_001243659|GLRX|2745|glutaredoxin (thioltransferase)	NM_002064|GLRX|2745|glutaredoxin (thioltransferase)
hg19_v1_chr1_-_149900143_149900235	0.016181	LHX3,4.p2	NM_005850|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	AK097315|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa
hg19_v1_chr3_-_157221127_157221135	0.0160898	LHX3,4.p2	BC111017|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	AB051479|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167911|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167912|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)
hg19_v1_chr10_+_115524577_115524577	0.0159718	LHX3,4.p2	BC037870|C10orf81|79949|chromosome 10 open reading frame 81	FJ236306|C10orf81|79949|chromosome 10 open reading frame 81	NM_182601|C10orf81|79949|chromosome 10 open reading frame 81
hg19_v1_chr11_+_92085261_92085261	0.0159432	LHX3,4.p2	NM_001008781|FAT3|120114|FAT tumor suppressor homolog 3 (Drosophila)
hg19_v1_chr13_-_96294282_96294404	0.0158692	LHX3,4.p2	AF272347|DZIP1|22873|DAZ interacting protein 1	AF272348|DZIP1|22873|DAZ interacting protein 1
hg19_v1_chr4_+_3315873_3315873	0.0157092	LHX3,4.p2	AF030111|RGS12|6002|regulator of G-protein signaling 12	NM_002926|RGS12|6002|regulator of G-protein signaling 12	NM_198229|RGS12|6002|regulator of G-protein signaling 12
hg19_v1_chr19_+_48949241_48949278	0.0156776	LHX3,4.p2	AF337808|GRWD1|83743|glutamate-rich WD repeat containing 1	BC002440|GRWD1|83743|glutamate-rich WD repeat containing 1	EF011614|GRWD1|83743|glutamate-rich WD repeat containing 1	AL713729|GRWD1|83743|glutamate-rich WD repeat containing 1	DQ892630|GRWD1|83743|glutamate-rich WD repeat containing 1	DQ895868|GRWD1|83743|glutamate-rich WD repeat containing 1	BC036281|GRWD1|83743|glutamate-rich WD repeat containing 1	BC047351|GRWD1|83743|glutamate-rich WD repeat containing 1
hg19_v1_chr7_+_141695678_141695706	0.0155596	LHX3,4.p2	AF016833|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)	NM_004668|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)	BC120872|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)
hg19_v1_chr3_+_35683848_35683848	0.0154989	LHX3,4.p2	BC051828|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	NM_016300|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa
hg19_v1_chr5_+_69321071_69321259	0.0154844	LHX3,4.p2	NM_021967|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_022968|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC021174|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_001178087|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	NM_022978|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	AF073519|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	AF073518|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC035932|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC093880|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC171749|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC101970|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC103687|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC104738|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC143260|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC093882|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC143255|SERF1B|728492|small EDRK-rich factor 1B (centromeric)
hg19_v1_chr2_+_32502956_32502969	0.0153673	LHX3,4.p2	NM_032312|YIPF4|84272|Yip1 domain family, member 4
hg19_v1_chr11_+_65266980_65267204	0.0153661	LHX3,4.p2	
hg19_v1_chr8_+_107738239_107738471	0.0152192	LHX3,4.p2	AK303695|OXR1|55074|oxidation resistance 1	NM_001198534|OXR1|55074|oxidation resistance 1	NM_001198535|OXR1|55074|oxidation resistance 1	AB075503|OXR1|55074|oxidation resistance 1	AK302844|OXR1|55074|oxidation resistance 1	AK316153|OXR1|55074|oxidation resistance 1	FN650109|OXR1|55074|oxidation resistance 1
hg19_v1_chr17_+_30348022_30348165	0.0149889	LHX3,4.p2	AY386261|LRRC37B|114659|leucine rich repeat containing 37B	AK302740|LRRC37B|114659|leucine rich repeat containing 37B	BC117373|LRRC37B|114659|leucine rich repeat containing 37B	BC143578|LRRC37B|114659|leucine rich repeat containing 37B	BC143581|LRRC37B|114659|leucine rich repeat containing 37B	AK310287|LRRC37B|114659|leucine rich repeat containing 37B	NM_052888|LRRC37B|114659|leucine rich repeat containing 37B	HQ258530|LRRC37B|114659|leucine rich repeat containing 37B	AJ314647|LRRC37B|114659|leucine rich repeat containing 37B
hg19_v1_chr1_+_206643786_206643827	0.0149842	LHX3,4.p2	AK093798|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon	AK310737|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon	AY660028|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon
hg19_v1_chr3_-_186262114_186262166	0.0149689	LHX3,4.p2	AF161703|CRYGS|1427|crystallin, gamma S	BC069478|CRYGS|1427|crystallin, gamma S	AK314172|CRYGS|1427|crystallin, gamma S	NM_017541|CRYGS|1427|crystallin, gamma S
hg19_v1_chr3_-_129599220_129599401	0.0149354	LHX3,4.p2	AK291448|TMCC1|23023|transmembrane and coiled-coil domain family 1	BC039859|TMCC1|23023|transmembrane and coiled-coil domain family 1	NM_001017395|TMCC1|23023|transmembrane and coiled-coil domain family 1
hg19_v1_chr4_-_54457628_54457659	0.0148966	LHX3,4.p2	BC022983|LNX1|84708|ligand of numb-protein X 1
hg19_v1_chr3_+_130569368_130569444	0.0148643	LHX3,4.p2	NM_001199180|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1	NM_001199181|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1	NM_001199182|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1	AK296470|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1
hg19_v1_chr13_-_49975734_49975734	0.014793	LHX3,4.p2	NM_030925|CAB39L|81617|calcium binding protein 39-like
hg19_v1_chr6_+_151561571_151561591	0.0147544	LHX3,4.p2	
hg19_v1_chr17_+_78518742_78518894	0.0147221	LHX3,4.p2	AK055912|RPTOR|57521|regulatory associated protein of MTOR, complex 1
hg19_v1_chr14_+_58894395_58894447	0.0145395	LHX3,4.p2	
hg19_v1_chr2_-_200325200_200325283	0.0144213	LHX3,4.p2	AB028957|SATB2|23314|SATB homeobox 2
hg19_v1_chr4_-_39523132_39523141	0.0143684	LHX3,4.p2	DQ891116|UGDH|7358|UDP-glucose 6-dehydrogenase	DQ894295|UGDH|7358|UDP-glucose 6-dehydrogenase
hg19_v1_chr2_-_87248942_87248974	0.0143588	LHX3,4.p2	BC107767|PLGLB1|5343|plasminogen-like B1	BC109248|PLGLB1|5343|plasminogen-like B1	BC070296|PLGLB1|5343|plasminogen-like B1	BC005379|PLGLB2|5342|plasminogen-like B2	NM_001032392|PLGLB1|5343|plasminogen-like B1	M93143|PLGLB2|5342|plasminogen-like B2	NM_002665|PLGLB2|5342|plasminogen-like B2	BC022294|PLGLB2|5342|plasminogen-like B2
hg19_v1_chr4_-_170077807_170077832	0.0143019	LHX3,4.p2	BC041023|SH3RF1|57630|SH3 domain containing ring finger 1
hg19_v1_chr15_-_72563627_72563627	0.0142846	LHX3,4.p2	NM_020214|PARP6|56965|poly (ADP-ribose) polymerase family, member 6
hg19_v1_chr1_+_35851101_35851133	0.0141623	LHX3,4.p2	BX648067|ZMYM4|9202|zinc finger, MYM-type 4
hg19_v1_chr3_+_159943252_159943422	0.0140957	LHX3,4.p2	NM_001168214|C3orf80|401097|chromosome 3 open reading frame 80
hg19_v1_chr8_-_108510094_108510282	0.0140707	LHX3,4.p2	U83508|ANGPT1|284|angiopoietin 1	BC152411|ANGPT1|284|angiopoietin 1	BC152419|ANGPT1|284|angiopoietin 1	D13628|ANGPT1|284|angiopoietin 1	AY055342|ANGPT1|284|angiopoietin 1	NM_001146|ANGPT1|284|angiopoietin 1	NM_001199859|ANGPT1|284|angiopoietin 1	BX648814|ANGPT1|284|angiopoietin 1
hg19_v1_chr18_+_46065367_46066179	0.0140704	LHX3,4.p2	AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor	NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor	NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor	BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor
hg19_v1_chr11_-_16497917_16497934	0.0139395	LHX3,4.p2	AF309034|SOX6|55553|SRY (sex determining region Y)-box 6	NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6
hg19_v1_chr12_-_10022457_10022457	0.0139198	LHX3,4.p2	NM_005127|CLEC2B|9976|C-type lectin domain family 2, member B
hg19_v1_chr3_-_178969402_178969417	0.0139054	LHX3,4.p2	AF160968|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3	NM_014407|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3	BC113851|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3
hg19_v1_chr20_+_42187705_42187735	0.0138035	LHX3,4.p2	BC006523|SGK2|10110|serum/glucocorticoid regulated kinase 2	BC014037|SGK2|10110|serum/glucocorticoid regulated kinase 2	AF169034|SGK2|10110|serum/glucocorticoid regulated kinase 2
hg19_v1_chr4_+_3371723_3371723	0.0137933	LHX3,4.p2	AF030109|RGS12|6002|regulator of G-protein signaling 12	NM_198227|RGS12|6002|regulator of G-protein signaling 12
hg19_v1_chr10_-_75335415_75335432	0.013691	LHX3,4.p2	AJ583820|USP54|159195|ubiquitin specific peptidase 54	NM_152586|USP54|159195|ubiquitin specific peptidase 54
hg19_v1_chr1_+_10509775_10509775	0.013538	LHX3,4.p2	AY358561|CORT|1325|cortistatin	NM_001302|CORT|1325|cortistatin
hg19_v1_chr2_+_202047620_202047620	0.0133943	LHX3,4.p2	NM_001206524|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	NM_001206542|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	NM_001230|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	NM_032974|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	NM_032976|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	NM_032977|CASP10|843|caspase 10, apoptosis-related cysteine peptidase
hg19_v1_chr2_+_5832778_5832852	0.0133789	LHX3,4.p2	U23752|SOX11|6664|SRY (sex determining region Y)-box 11	AB028641|SOX11|6664|SRY (sex determining region Y)-box 11	NM_003108|SOX11|6664|SRY (sex determining region Y)-box 11	BC025789|SOX11|6664|SRY (sex determining region Y)-box 11
hg19_v1_chr5_-_150467220_150467220	0.0133706	LHX3,4.p2	AK290999|TNIP1|10318|TNFAIP3 interacting protein 1	NM_001252390|TNIP1|10318|TNFAIP3 interacting protein 1
hg19_v1_chr16_+_28565225_28565256	0.0133671	LHX3,4.p2	NM_138414|CCDC101|112869|coiled-coil domain containing 101	BC011981|CCDC101|112869|coiled-coil domain containing 101
hg19_v1_chr3_+_99833773_99833773	0.0131849	LHX3,4.p2	AK300704|C3orf26|84319|chromosome 3 open reading frame 26	NM_001167924|C3orf26|84319|chromosome 3 open reading frame 26
hg19_v1_chr3_+_148447966_148447966	0.0131256	LHX3,4.p2	NM_032049|AGTR1|185|angiotensin II receptor, type 1
hg19_v1_chr2_-_37297372_37297516	0.0129969	LHX3,4.p2	BX538008|HEATR5B|54497|HEAT repeat containing 5B
hg19_v1_chr15_+_64680002_64680070	0.0129517	LHX3,4.p2	NM_016213|TRIP4|9325|thyroid hormone receptor interactor 4	BC012448|TRIP4|9325|thyroid hormone receptor interactor 4	AK314319|TRIP4|9325|thyroid hormone receptor interactor 4	EU446746|TRIP4|9325|thyroid hormone receptor interactor 4
hg19_v1_chr8_-_17580024_17580083	0.0126632	LHX3,4.p2	AK294860|MTUS1|57509|microtubule associated tumor suppressor 1	NM_001166393|MTUS1|57509|microtubule associated tumor suppressor 1
hg19_v1_chr8_-_17555158_17555245	0.0125159	LHX3,4.p2	AF293357|MTUS1|57509|microtubule associated tumor suppressor 1	BC017740|MTUS1|57509|microtubule associated tumor suppressor 1	AK314692|MTUS1|57509|microtubule associated tumor suppressor 1	BC098381|MTUS1|57509|microtubule associated tumor suppressor 1	BC142971|MTUS1|57509|microtubule associated tumor suppressor 1	FJ472827|MTUS1|57509|microtubule associated tumor suppressor 1	AK289750|MTUS1|57509|microtubule associated tumor suppressor 1	NM_020749|MTUS1|57509|microtubule associated tumor suppressor 1
hg19_v1_chr2_-_122159140_122159171	0.0124809	LHX3,4.p2	CR749627|CLASP1|23332|cytoplasmic linker associated protein 1
hg19_v1_chr1_+_197237333_197237542	0.0124549	LHX3,4.p2	NM_001193640|CRB1|23418|crumbs homolog 1 (Drosophila)	NM_201253|CRB1|23418|crumbs homolog 1 (Drosophila)	AK299368|CRB1|23418|crumbs homolog 1 (Drosophila)	AK289733|CRB1|23418|crumbs homolog 1 (Drosophila)	AK307844|CRB1|23418|crumbs homolog 1 (Drosophila)	AB208923|CRB1|23418|crumbs homolog 1 (Drosophila)	AF154671|CRB1|23418|crumbs homolog 1 (Drosophila)	AY043324|CRB1|23418|crumbs homolog 1 (Drosophila)	AY043325|CRB1|23418|crumbs homolog 1 (Drosophila)	BC136271|CRB1|23418|crumbs homolog 1 (Drosophila)	BC143726|CRB1|23418|crumbs homolog 1 (Drosophila)	AJ748821|CRB1|23418|crumbs homolog 1 (Drosophila)
hg19_v1_chr19_+_48949217_48949239	0.0123438	LHX3,4.p2	AK131055|GRWD1|83743|glutamate-rich WD repeat containing 1	AK315625|GRWD1|83743|glutamate-rich WD repeat containing 1
hg19_v1_chr6_+_131894343_131894422	0.01225	LHX3,4.p2	NM_000045|ARG1|383|arginase, liver	NM_001244438|ARG1|383|arginase, liver	AY074488|ARG1|383|arginase, liver	BC005321|ARG1|383|arginase, liver	M14502|ARG1|383|arginase, liver	BC020653|ARG1|383|arginase, liver	DQ892039|ARG1|383|arginase, liver	DQ895230|ARG1|383|arginase, liver	BT006741|ARG1|383|arginase, liver
hg19_v1_chr5_+_149997205_149997205	0.0122216	LHX3,4.p2	AK127049|SYNPO|11346|synaptopodin	NM_001166209|SYNPO|11346|synaptopodin
hg19_v1_chrM_+_5513_5584	0.0119905	LHX3,4.p2	
hg19_v1_chr22_+_20918810_20918838	0.0118805	LHX3,4.p2	U80745|MED15|51586|mediator complex subunit 15
hg19_v1_chr12_-_21487831_21487833	0.0118728	LHX3,4.p2	NM_021094|SLCO1A2|6579|solute carrier organic anion transporter family, member 1A2	AK296044|SLCO1A2|6579|solute carrier organic anion transporter family, member 1A2
hg19_v1_chr12_-_50595303_50595315	0.011832	LHX3,4.p2	AK023649|LIMA1|51474|LIM domain and actin binding 1	AF157325|LIMA1|51474|LIM domain and actin binding 1	NM_001243775|LIMA1|51474|LIM domain and actin binding 1
hg19_v1_chr4_-_2230957_2230957	0.0118182	LHX3,4.p2	AY136549|POLN|353497|polymerase (DNA directed) nu	NM_181808|POLN|353497|polymerase (DNA directed) nu
hg19_v1_chr22_-_36236330_36236351	0.0117702	LHX3,4.p2	CR456559|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2
hg19_v1_chr17_+_61086897_61086897	0.0115797	LHX3,4.p2	NM_025185|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
hg19_v1_chr17_+_19976828_19976976	0.0115589	LHX3,4.p2	AK314341|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1
hg19_v1_chr6_+_26440699_26440780	0.0114816	LHX3,4.p2	NM_001242803|BTN3A3|10384|butyrophilin, subfamily 3, member A3	NM_006994|BTN3A3|10384|butyrophilin, subfamily 3, member A3	NM_197974|BTN3A3|10384|butyrophilin, subfamily 3, member A3	AK291722|BTN3A3|10384|butyrophilin, subfamily 3, member A3	AK301553|BTN3A3|10384|butyrophilin, subfamily 3, member A3	AB209581|BTN3A3|10384|butyrophilin, subfamily 3, member A3	BC015815|BTN3A3|10384|butyrophilin, subfamily 3, member A3	AK223279|BTN3A3|10384|butyrophilin, subfamily 3, member A3	AK223301|BTN3A3|10384|butyrophilin, subfamily 3, member A3	U90548|BTN3A3|10384|butyrophilin, subfamily 3, member A3
hg19_v1_chr11_-_118084073_118084073	0.0114111	LHX3,4.p2	AK094399|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	NM_153206|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1
hg19_v1_chr16_+_4902076_4902215	0.0113604	LHX3,4.p2	NM_016936|UBN1|29855|ubinuclein 1	AF108461|UBN1|29855|ubinuclein 1
hg19_v1_chr1_+_20208923_20209003	0.0112717	LHX3,4.p2	
hg19_v1_chr5_-_176981537_176981559	0.0112679	LHX3,4.p2	AB067518|FAM193B|54540|family with sequence similarity 193, member B	NM_001190946|FAM193B|54540|family with sequence similarity 193, member B
hg19_v1_chr2_+_29038862_29038880	0.0112616	LHX3,4.p2	NM_001008779|SPDYA|245711|speedy homolog A (Xenopus laevis)	AY820303|SPDYA|245711|speedy homolog A (Xenopus laevis)	AY820304|SPDYA|245711|speedy homolog A (Xenopus laevis)
hg19_v1_chr2_+_185463292_185463319	0.0111798	LHX3,4.p2	BC142612|ZNF804A|91752|zinc finger protein 804A
hg19_v1_chr18_+_21269404_21269424	0.0111251	LHX3,4.p2	AK096422|LAMA3|3909|laminin, alpha 3
hg19_v1_chr10_+_24755459_24755479	0.0110822	LHX3,4.p2	BX640796|KIAA1217|56243|KIAA1217	BX648451|KIAA1217|56243|KIAA1217	BC098577|KIAA1217|56243|KIAA1217
hg19_v1_chr2_+_202047803_202047917	0.0110551	LHX3,4.p2	AK310746|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	U86214|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AK304859|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AK225475|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AY690601|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	BC042844|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	U60519|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AJ487678|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AJ487679|CASP10|843|caspase 10, apoptosis-related cysteine peptidase
hg19_v1_chr11_+_22696381_22696415	0.0109978	LHX3,4.p2	CR450285|GAS2|2620|growth arrest-specific 2
hg19_v1_chr3_-_99833348_99833356	0.0109576	LHX3,4.p2	BC017987|FILIP1L|11259|filamin A interacting protein 1-like	NM_001042459|FILIP1L|11259|filamin A interacting protein 1-like	NM_182909|FILIP1L|11259|filamin A interacting protein 1-like	AF329092|FILIP1L|11259|filamin A interacting protein 1-like	AX776292|FILIP1L|11259|filamin A interacting protein 1-like
hg19_v1_chr22_+_31478845_31478899	0.0109472	LHX3,4.p2	AK304084|SMTN|6525|smoothelin	NM_001207017|SMTN|6525|smoothelin
hg19_v1_chr6_-_49712055_49712167	0.0109312	LHX3,4.p2	BC069602|CRISP3|10321|cysteine-rich secretory protein 3	X95240|CRISP3|10321|cysteine-rich secretory protein 3	AK223380|CRISP3|10321|cysteine-rich secretory protein 3	X94323|CRISP3|10321|cysteine-rich secretory protein 3	AK303966|CRISP3|10321|cysteine-rich secretory protein 3	AK313387|CRISP3|10321|cysteine-rich secretory protein 3	AK292786|CRISP3|10321|cysteine-rich secretory protein 3	NM_001190986|CRISP3|10321|cysteine-rich secretory protein 3	NM_006061|CRISP3|10321|cysteine-rich secretory protein 3
hg19_v1_chr2_-_220083658_220083691	0.0109159	LHX3,4.p2	AK057026|ABCB6|10058|ATP-binding cassette, sub-family B (MDR/TAP), member 6	BC000559|ABCB6|10058|ATP-binding cassette, sub-family B (MDR/TAP), member 6	AJ289233|ABCB6|10058|ATP-binding cassette, sub-family B (MDR/TAP), member 6	AK303230|ABCB6|10058|ATP-binding cassette, sub-family B (MDR/TAP), member 6
hg19_v1_chr5_+_137673223_137673286	0.0109111	LHX3,4.p2	NM_001135647|FAM53C|51307|family with sequence similarity 53, member C	BC052993|FAM53C|51307|family with sequence similarity 53, member C
hg19_v1_chr1_-_168513201_168513234	0.0108741	LHX3,4.p2	BC069360|XCL2|6846|chemokine (C motif) ligand 2	U23772|XCL1|6375|chemokine (C motif) ligand 1	BC070308|XCL2|6846|chemokine (C motif) ligand 2	NM_003175|XCL2|6846|chemokine (C motif) ligand 2
hg19_v1_chr10_-_52645430_52645440	0.010834	LHX3,4.p2	BC054873|A1CF|29974|APOBEC1 complementation factor	AK000324|A1CF|29974|APOBEC1 complementation factor	NM_001198818|A1CF|29974|APOBEC1 complementation factor	NM_001198819|A1CF|29974|APOBEC1 complementation factor	NM_001198820|A1CF|29974|APOBEC1 complementation factor	NM_014576|A1CF|29974|APOBEC1 complementation factor	NM_138932|A1CF|29974|APOBEC1 complementation factor	NM_138933|A1CF|29974|APOBEC1 complementation factor
hg19_v1_chr1_+_206643585_206643585	0.0107684	LHX3,4.p2	NM_001193321|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon	NM_001193322|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon	NM_014002|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon
hg19_v1_chr7_+_134671244_134671327	0.010766	LHX3,4.p2	AK302827|AGBL3|340351|ATP/GTP binding protein-like 3	NM_178563|AGBL3|340351|ATP/GTP binding protein-like 3	BC030651|AGBL3|340351|ATP/GTP binding protein-like 3	AL832281|AGBL3|340351|ATP/GTP binding protein-like 3	AK023045|AGBL3|340351|ATP/GTP binding protein-like 3
hg19_v1_chr18_+_22040592_22040692	0.0106228	LHX3,4.p2	AF312230|HRH4|59340|histamine receptor H4	BC069136|HRH4|59340|histamine receptor H4	NM_001143828|HRH4|59340|histamine receptor H4	NM_001160166|HRH4|59340|histamine receptor H4	NM_021624|HRH4|59340|histamine receptor H4	AB045370|HRH4|59340|histamine receptor H4	BC112348|HRH4|59340|histamine receptor H4	AB044934|HRH4|59340|histamine receptor H4	AF307973|HRH4|59340|histamine receptor H4	AF325356|HRH4|59340|histamine receptor H4	AF329449|HRH4|59340|histamine receptor H4	AJ298292|HRH4|59340|histamine receptor H4	AY008280|HRH4|59340|histamine receptor H4	AY136745|HRH4|59340|histamine receptor H4	DQ835186|HRH4|59340|histamine receptor H4	DQ835187|HRH4|59340|histamine receptor H4
hg19_v1_chr15_-_55652777_55652835	0.0105835	LHX3,4.p2	AF011794|CCPG1|9236|cell cycle progression 1
hg19_v1_chrX_+_43515406_43515423	0.010563	LHX3,4.p2	NM_000240|MAOA|4128|monoamine oxidase A	AK223499|MAOA|4128|monoamine oxidase A
hg19_v1_chr12_-_91505215_91505293	0.0105422	LHX3,4.p2	BC035997|LUM|4060|lumican	AK223177|LUM|4060|lumican	U18728|LUM|4060|lumican	U21128|LUM|4060|lumican	AK312682|LUM|4060|lumican	BC007038|LUM|4060|lumican
hg19_v1_chr3_+_69812961_69812961	0.0105	LHX3,4.p2	AB006988|MITF|4286|microphthalmia-associated transcription factor	NM_006722|MITF|4286|microphthalmia-associated transcription factor
hg19_v1_chr9_-_86082656_86082663	0.010432	LHX3,4.p2	NM_001244960|FRMD3|257019|FERM domain containing 3	AY137774|FRMD3|257019|FERM domain containing 3
hg19_v1_chr19_-_44008984_44009086	0.0103192	LHX3,4.p2	BC029299|PHLDB3|653583|pleckstrin homology-like domain, family B, member 3	NM_198850|PHLDB3|653583|pleckstrin homology-like domain, family B, member 3	BC070094|PHLDB3|653583|pleckstrin homology-like domain, family B, member 3
hg19_v1_chr7_-_111428944_111429079	0.0102582	LHX3,4.p2	AK294820|DOCK4|9732|dedicator of cytokinesis 4
hg19_v1_chr22_-_41682187_41682228	0.0102404	LHX3,4.p2	AK303524|RANGAP1|5905|Ran GTPase activating protein 1	NM_002883|RANGAP1|5905|Ran GTPase activating protein 1
hg19_v1_chr5_+_147582338_147582403	0.0102036	LHX3,4.p2	GQ504704|SPINK6|404203|serine peptidase inhibitor, Kazal type 6	NM_001195290|SPINK6|404203|serine peptidase inhibitor, Kazal type 6	NM_205841|SPINK6|404203|serine peptidase inhibitor, Kazal type 6	GQ504705|SPINK6|404203|serine peptidase inhibitor, Kazal type 6	BC032003|SPINK6|404203|serine peptidase inhibitor, Kazal type 6
hg19_v1_chrX_-_10544852_10544957	0.0101167	LHX3,4.p2	AF035360|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193277|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY112903|MID1|4281|midline 1 (Opitz/BBB syndrome)
hg19_v1_chr9_+_34652125_34652204	0.0099946	LHX3,4.p2	NM_001142784|IL11RA|3590|interleukin 11 receptor, alpha
hg19_v1_chr15_-_41364176_41364232	0.00991156	LHX3,4.p2	AK057582|INO80|54617|INO80 homolog (S. cerevisiae)
hg19_v1_chr6_-_76782204_76782394	0.00990546	LHX3,4.p2	HQ258361|IMPG1|3617|interphotoreceptor matrix proteoglycan 1	BC117450|IMPG1|3617|interphotoreceptor matrix proteoglycan 1	BC117452|IMPG1|3617|interphotoreceptor matrix proteoglycan 1	AF047492|IMPG1|3617|interphotoreceptor matrix proteoglycan 1	NM_001563|IMPG1|3617|interphotoreceptor matrix proteoglycan 1	CR749572|IMPG1|3617|interphotoreceptor matrix proteoglycan 1
hg19_v1_chr17_+_4692226_4692317	0.00982143	LHX3,4.p2	BC029290|GLTPD2|388323|glycolipid transfer protein domain containing 2	NM_001014985|GLTPD2|388323|glycolipid transfer protein domain containing 2
hg19_v1_chr8_-_110693233_110693233	0.0097396	LHX3,4.p2	AK290469|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099745|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099746|SYBU|55638|syntabulin (syntaxin-interacting)
hg19_v1_chr7_-_112758604_112758608	0.00972666	LHX3,4.p2	BC065765|LOC401397|401397|uncharacterized LOC401397	BX537645|LOC401397|401397|uncharacterized LOC401397
hg19_v1_chr6_-_24719286_24719402	0.00951705	LHX3,4.p2	AK022681|C6orf62|81688|chromosome 6 open reading frame 62	AB075502|C6orf62|81688|chromosome 6 open reading frame 62	AL136632|C6orf62|81688|chromosome 6 open reading frame 62	NM_030939|C6orf62|81688|chromosome 6 open reading frame 62
hg19_v1_chr9_-_123639462_123639495	0.00946805	LHX3,4.p2	AK122744|PHF19|26147|PHD finger protein 19	BC022374|PHF19|26147|PHD finger protein 19	AK303433|PHF19|26147|PHD finger protein 19
hg19_v1_chr4_-_54424345_54424355	0.00944561	LHX3,4.p2	AY358326|LNX1|84708|ligand of numb-protein X 1	BC034737|LNX1|84708|ligand of numb-protein X 1
hg19_v1_chr7_-_26232148_26232154	0.00937857	LHX3,4.p2	BX538099|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1
hg19_v1_chr6_-_26235160_26235241	0.00921734	LHX3,4.p2	EU446961|HIST1H1D|3007|histone cluster 1, H1d	AK312845|HIST1H1D|3007|histone cluster 1, H1d	NM_005320|HIST1H1D|3007|histone cluster 1, H1d	BC104874|HIST1H1D|3007|histone cluster 1, H1d	BC111971|HIST1H1D|3007|histone cluster 1, H1d
hg19_v1_chr4_-_146859960_146859976	0.00919991	LHX3,4.p2	
hg19_v1_chr2_+_209271555_209271768	0.00919625	LHX3,4.p2	BC036811|PTH2R|5746|parathyroid hormone 2 receptor	NM_005048|PTH2R|5746|parathyroid hormone 2 receptor	U25128|PTH2R|5746|parathyroid hormone 2 receptor	HQ257935|PTH2R|5746|parathyroid hormone 2 receptor	AY497546|PTH2R|5746|parathyroid hormone 2 receptor
hg19_v1_chr4_+_187148624_187148712	0.00911727	LHX3,4.p2	AK292624|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	AK297672|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	M13143|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	NM_000892|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	AK313378|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	BC117349|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	BC117351|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	BC143911|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1
hg19_v1_chr7_-_44580857_44580913	0.00911088	LHX3,4.p2	AY437865|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	AY515256|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	FJ481111|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	BC117178|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	BC143731|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	BC143756|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	AF192522|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	AF192523|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	NM_001101648|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	NM_013389|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1
hg19_v1_chr2_-_188312872_188313020	0.00908421	LHX3,4.p2	DQ280491|CALCRL|10203|calcitonin receptor-like	U17473|CALCRL|10203|calcitonin receptor-like	L76380|CALCRL|10203|calcitonin receptor-like	AK291630|CALCRL|10203|calcitonin receptor-like	AK292998|CALCRL|10203|calcitonin receptor-like	NM_005795|CALCRL|10203|calcitonin receptor-like
hg19_v1_chr17_+_3377346_3377403	0.00908153	LHX3,4.p2	AK312901|ASPA|443|aspartoacylase	NM_001128085|ASPA|443|aspartoacylase
hg19_v1_chr8_-_102803438_102803438	0.00905657	LHX3,4.p2	NM_032041|NCALD|83988|neurocalcin delta
hg19_v1_chr5_+_141348450_141348450	0.00900334	LHX3,4.p2	NM_004290|RNF14|9604|ring finger protein 14	NM_183398|RNF14|9604|ring finger protein 14	NM_183400|RNF14|9604|ring finger protein 14
hg19_v1_chr6_+_105404922_105404922	0.00899765	LHX3,4.p2	AK131411|LIN28B|389421|lin-28 homolog B (C. elegans)	DQ127228|LIN28B|389421|lin-28 homolog B (C. elegans)	NM_001004317|LIN28B|389421|lin-28 homolog B (C. elegans)
hg19_v1_chr12_+_26348488_26348683	0.00889507	LHX3,4.p2	AK304667|SSPN|8082|sarcospan (Kras oncogene-associated gene)	NM_005086|SSPN|8082|sarcospan (Kras oncogene-associated gene)	AK314353|SSPN|8082|sarcospan (Kras oncogene-associated gene)	AL136756|SSPN|8082|sarcospan (Kras oncogene-associated gene)	BC062299|SSPN|8082|sarcospan (Kras oncogene-associated gene)	AM392675|SSPN|8082|sarcospan (Kras oncogene-associated gene)	AM392714|SSPN|8082|sarcospan (Kras oncogene-associated gene)	AF016028|SSPN|8082|sarcospan (Kras oncogene-associated gene)	DQ897666|SSPN|8082|sarcospan (Kras oncogene-associated gene)	EU433933|SSPN|8082|sarcospan (Kras oncogene-associated gene)	X89105|SSPN|8082|sarcospan (Kras oncogene-associated gene)
hg19_v1_chr2_-_55199894_55199922	0.00883332	LHX3,4.p2	
hg19_v1_chr5_-_58882274_58882324	0.00878089	LHX3,4.p2	U50159|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	NM_006203|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	L20970|PDE4D|5144|phosphodiesterase 4D, cAMP-specific
hg19_v1_chr17_-_18177716_18177777	0.00872516	LHX3,4.p2	AF086042|TOP3A|7156|topoisomerase (DNA) III alpha
hg19_v1_chr6_+_43738394_43738674	0.00863583	LHX3,4.p2	BC011177|VEGFA|7422|vascular endothelial growth factor A	BC065522|VEGFA|7422|vascular endothelial growth factor A
hg19_v1_chr7_+_26400503_26400554	0.00862017	LHX3,4.p2	NM_001199837|SNX10|29887|sorting nexin 10	AK307905|SNX10|29887|sorting nexin 10
hg19_v1_chrM_+_10361_10600	0.0085998	LHX3,4.p2	
hg19_v1_chr1_-_190446701_190446770	0.00857878	LHX3,4.p2	AK123024|FAM5C|339479|family with sequence similarity 5, member C	AB111893|FAM5C|339479|family with sequence similarity 5, member C	NM_199051|FAM5C|339479|family with sequence similarity 5, member C
hg19_v1_chrX_-_24665225_24665425	0.00852636	LHX3,4.p2	AF148464|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AF052510|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg19_v1_chr1_-_231560789_231560789	0.00843734	LHX3,4.p2	AF229245|EGLN1|54583|egl nine homolog 1 (C. elegans)	NM_022051|EGLN1|54583|egl nine homolog 1 (C. elegans)
hg19_v1_chr3_+_45927995_45928116	0.00838549	LHX3,4.p2	NM_006641|CCR9|10803|chemokine (C-C motif) receptor 9	NM_031200|CCR9|10803|chemokine (C-C motif) receptor 9	AF145439|CCR9|10803|chemokine (C-C motif) receptor 9	BC069678|CCR9|10803|chemokine (C-C motif) receptor 9	AK312824|CCR9|10803|chemokine (C-C motif) receptor 9	AK313366|CCR9|10803|chemokine (C-C motif) receptor 9	AF145440|CCR9|10803|chemokine (C-C motif) receptor 9	AF145207|CCR9|10803|chemokine (C-C motif) receptor 9	AJ132337|CCR9|10803|chemokine (C-C motif) receptor 9
hg19_v1_chr6_+_52935770_52935770	0.00837378	LHX3,4.p2	AF176704|FBXO9|26268|F-box protein 9	NM_012347|FBXO9|26268|F-box protein 9
hg19_v1_chr17_+_78518611_78518688	0.00836728	LHX3,4.p2	AK295964|RPTOR|57521|regulatory associated protein of MTOR, complex 1	NM_001163034|RPTOR|57521|regulatory associated protein of MTOR, complex 1	NM_020761|RPTOR|57521|regulatory associated protein of MTOR, complex 1	AK296321|RPTOR|57521|regulatory associated protein of MTOR, complex 1	BC064515|RPTOR|57521|regulatory associated protein of MTOR, complex 1
hg19_v1_chr1_+_150459913_150459951	0.00833617	LHX3,4.p2	AK225368|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)	BC009997|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)	NM_025150|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)	BC007824|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)
hg19_v1_chr9_-_32526164_32526340	0.00824105	LHX3,4.p2	AK301678|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	AK315040|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	BX647917|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	BC070029|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	BC132786|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	BC136610|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	AF038963|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	NM_014314|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	BC107731|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58
hg19_v1_chr20_+_30697291_30697447	0.00821007	LHX3,4.p2	NM_014742|TM9SF4|9777|transmembrane 9 superfamily protein member 4
hg19_v1_chr1_+_81771844_81772011	0.00808056	LHX3,4.p2	BC031321|LPHN2|23266|latrophilin 2	AK123422|LPHN2|23266|latrophilin 2
hg19_v1_chr6_+_26365397_26365508	0.00807491	LHX3,4.p2	NM_001197247|BTN3A2|11118|butyrophilin, subfamily 3, member A2	NM_001197249|BTN3A2|11118|butyrophilin, subfamily 3, member A2	NM_007047|BTN3A2|11118|butyrophilin, subfamily 3, member A2	AK312847|BTN3A2|11118|butyrophilin, subfamily 3, member A2	AK290880|BTN3A2|11118|butyrophilin, subfamily 3, member A2	U90546|BTN3A2|11118|butyrophilin, subfamily 3, member A2	AK303600|BTN3A2|11118|butyrophilin, subfamily 3, member A2	NM_001197248|BTN3A2|11118|butyrophilin, subfamily 3, member A2	BC002832|BTN3A2|11118|butyrophilin, subfamily 3, member A2	BC020214|BTN3A2|11118|butyrophilin, subfamily 3, member A2	AK299417|BTN3A2|11118|butyrophilin, subfamily 3, member A2
hg19_v1_chr8_-_17579729_17579729	0.00791898	LHX3,4.p2	AK125188|MTUS1|57509|microtubule associated tumor suppressor 1	FJ472826|MTUS1|57509|microtubule associated tumor suppressor 1	NM_001001931|MTUS1|57509|microtubule associated tumor suppressor 1
hg19_v1_chr2_-_167343477_167343480	0.0079121	LHX3,4.p2	BC141864|SCN7A|6332|sodium channel, voltage-gated, type VII, alpha	M91556|SCN7A|6332|sodium channel, voltage-gated, type VII, alpha	NM_002976|SCN7A|6332|sodium channel, voltage-gated, type VII, alpha
hg19_v1_chr2_+_201473942_201474053	0.00778288	LHX3,4.p2	AK297930|AOX1|316|aldehyde oxidase 1	AK307738|AOX1|316|aldehyde oxidase 1
hg19_v1_chr2_-_234474197_234474235	0.00774872	LHX3,4.p2	AK001647|USP40|55230|ubiquitin specific peptidase 40	AJ583821|USP40|55230|ubiquitin specific peptidase 40	NM_018218|USP40|55230|ubiquitin specific peptidase 40
hg19_v1_chr1_-_94586678_94586704	0.00774739	LHX3,4.p2	AF001945|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4	U88667|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4	AK295818|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4	AF000148|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4	AB210040|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4	DQ426859|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4	NM_000350|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4
hg19_v1_chr1_+_174844655_174844683	0.00773809	LHX3,4.p2	NM_001035230|RABGAP1L|9910|RAB GTPase activating protein 1-like	BC012094|RABGAP1L|9910|RAB GTPase activating protein 1-like
hg19_v1_chr2_-_169887832_169887832	0.00768566	LHX3,4.p2	AF091582|ABCB11|8647|ATP-binding cassette, sub-family B (MDR/TAP), member 11	NM_003742|ABCB11|8647|ATP-binding cassette, sub-family B (MDR/TAP), member 11
hg19_v1_chr6_-_116692855_116692883	0.00763309	LHX3,4.p2	AK298559|LOC100287467|100287467|uncharacterized LOC100287467	AK316303|LOC100287467|100287467|uncharacterized LOC100287467
hg19_v1_chr10_-_94003002_94003037	0.00750398	LHX3,4.p2	AB023157|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3	NM_001178137|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3
hg19_v1_chr4_+_123161119_123161129	0.00748727	LHX3,4.p2	CR936613|KIAA1109|84162|KIAA1109
hg19_v1_chr17_+_73472578_73472627	0.00742588	LHX3,4.p2	AK316060|KIAA0195|9772|KIAA0195	AK294526|KIAA0195|9772|KIAA0195	CR936809|KIAA0195|9772|KIAA0195
hg19_v1_chr13_-_49018802_49018839	0.00741802	LHX3,4.p2	BC039373|LPAR6|10161|lysophosphatidic acid receptor 6	BC045651|LPAR6|10161|lysophosphatidic acid receptor 6	NM_005767|LPAR6|10161|lysophosphatidic acid receptor 6
hg19_v1_chr14_+_103851769_103851772	0.00721455	LHX3,4.p2	BX161395|MARK3|4140|MAP/microtubule affinity-regulating kinase 3
hg19_v1_chr20_+_3776905_3777106	0.00718323	LHX3,4.p2	S78187|CDC25B|994|cell division cycle 25 homolog B (S. pombe)	Z68092|CDC25B|994|cell division cycle 25 homolog B (S. pombe)	BC006395|CDC25B|994|cell division cycle 25 homolog B (S. pombe)	M81934|CDC25B|994|cell division cycle 25 homolog B (S. pombe)
hg19_v1_chr19_+_30433111_30433453	0.00717359	LHX3,4.p2	NM_003796|URI1|8725|URI1, prefoldin-like chaperone	AK226173|URI1|8725|URI1, prefoldin-like chaperone	AF091095|URI1|8725|URI1, prefoldin-like chaperone	AK292170|URI1|8725|URI1, prefoldin-like chaperone	BC067259|URI1|8725|URI1, prefoldin-like chaperone	AK314313|URI1|8725|URI1, prefoldin-like chaperone	AK001437|URI1|8725|URI1, prefoldin-like chaperone	NM_134447|URI1|8725|URI1, prefoldin-like chaperone
hg19_v1_chr2_-_166060552_166060603	0.00712486	LHX3,4.p2	AF225986|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	AF225987|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	AK299757|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_001081676|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_001081677|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_006922|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit
hg19_v1_chr19_+_52800424_52800450	0.00710437	LHX3,4.p2	BC007056|ZNF480|147657|zinc finger protein 480	BC054018|ZNF480|147657|zinc finger protein 480	NM_144684|ZNF480|147657|zinc finger protein 480	AK096559|ZNF480|147657|zinc finger protein 480	AK096442|ZNF480|147657|zinc finger protein 480	AK303271|ZNF480|147657|zinc finger protein 480	AL832560|ZNF480|147657|zinc finger protein 480	BC065503|ZNF480|147657|zinc finger protein 480	AY512662|ZNF480|147657|zinc finger protein 480	BC018783|ZNF480|147657|zinc finger protein 480
hg19_v1_chr1_+_100316530_100316598	0.00698251	LHX3,4.p2	NM_000646|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84011|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	AB208867|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
hg19_v1_chr15_+_57511616_57511718	0.00694744	LHX3,4.p2	AK294991|TCF12|6938|transcription factor 12	AK304007|TCF12|6938|transcription factor 12	AK311359|TCF12|6938|transcription factor 12	AK308101|TCF12|6938|transcription factor 12	NM_207040|TCF12|6938|transcription factor 12	BX537967|TCF12|6938|transcription factor 12	AM393573|TCF12|6938|transcription factor 12
hg19_v1_chr14_-_78083109_78083144	0.00690041	LHX3,4.p2	AB011098|SPTLC2|9517|serine palmitoyltransferase, long chain base subunit 2	NM_004863|SPTLC2|9517|serine palmitoyltransferase, long chain base subunit 2
hg19_v1_chr3_+_157827937_157827944	0.00689362	LHX3,4.p2	AK300388|RSRC1|51319|arginine/serine-rich coiled-coil 1
hg19_v1_chr17_-_1248346_1248366	0.00681644	LHX3,4.p2	L13388|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)
hg19_v1_chr17_-_2304217_2304415	0.00678764	LHX3,4.p2	X96401|MNT|4335|MAX binding protein	NM_020310|MNT|4335|MAX binding protein	AK291596|MNT|4335|MAX binding protein
hg19_v1_chr2_-_152830448_152830484	0.00677894	LHX3,4.p2	AY054985|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	AK290049|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	NM_001005747|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit
hg19_v1_chr1_-_205053530_205053644	0.00677181	LHX3,4.p2	BC061592|TMEM81|388730|transmembrane protein 81	AY359081|TMEM81|388730|transmembrane protein 81	NM_203376|TMEM81|388730|transmembrane protein 81	AK303432|TMEM81|388730|transmembrane protein 81
hg19_v1_chr4_-_99851785_99851787	0.00664706	LHX3,4.p2	NM_001130679|EIF4E|1977|eukaryotic translation initiation factor 4E	NM_001968|EIF4E|1977|eukaryotic translation initiation factor 4E	BC035166|EIF4E|1977|eukaryotic translation initiation factor 4E
hg19_v1_chr9_+_79093256_79093256	0.00660058	LHX3,4.p2	AY196296|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2	NM_001097635|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2
hg19_v1_chr15_-_100882105_100882182	0.00657202	LHX3,4.p2	AJ315735|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17	NM_139057|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17
hg19_v1_chr3_-_119582422_119582427	0.00655274	LHX3,4.p2	AY123976|GSK3B|2932|glycogen synthase kinase 3 beta
hg19_v1_chr21_+_30400229_30400257	0.00654189	LHX3,4.p2	DQ892395|USP16|10600|ubiquitin specific peptidase 16	DQ895610|USP16|10600|ubiquitin specific peptidase 16
hg19_v1_chr12_-_42983412_42983573	0.00647477	LHX3,4.p2	BC114939|PRICKLE1|144165|prickle homolog 1 (Drosophila)	BC114940|PRICKLE1|144165|prickle homolog 1 (Drosophila)	AF399844|PRICKLE1|144165|prickle homolog 1 (Drosophila)	AF543759|PRICKLE1|144165|prickle homolog 1 (Drosophila)	AF543760|PRICKLE1|144165|prickle homolog 1 (Drosophila)	AK056499|PRICKLE1|144165|prickle homolog 1 (Drosophila)	NM_153026|PRICKLE1|144165|prickle homolog 1 (Drosophila)
hg19_v1_chr14_+_75898836_75898836	0.00642132	LHX3,4.p2	BC051303|JDP2|122953|Jun dimerization protein 2	NM_001135049|JDP2|122953|Jun dimerization protein 2
hg19_v1_chr16_-_28634873_28634906	0.00640117	LHX3,4.p2	NM_177536|SULT1A1|6817|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1
hg19_v1_chr9_+_6720862_6720862	0.00629369	LHX3,4.p2	AK310439|KDM4C|23081|lysine (K)-specific demethylase 4C	NM_001146696|KDM4C|23081|lysine (K)-specific demethylase 4C
hg19_v1_chr10_+_18689512_18689615	0.00627935	LHX3,4.p2	NM_201570|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK299873|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK295113|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit
hg19_v1_chr6_+_34206567_34206567	0.00625515	LHX3,4.p2	BC015789|HMGA1|3159|high mobility group AT-hook 1	NM_145905|HMGA1|3159|high mobility group AT-hook 1
hg19_v1_chr14_+_103851775_103851997	0.0062376	LHX3,4.p2	AF465413|MARK3|4140|MAP/microtubule affinity-regulating kinase 3	BC024773|MARK3|4140|MAP/microtubule affinity-regulating kinase 3	U64205|MARK3|4140|MAP/microtubule affinity-regulating kinase 3
hg19_v1_chr10_+_48255223_48255428	0.00621739	LHX3,4.p2	AK298761|ANXA8|653145|annexin A8	NM_001040084|ANXA8|653145|annexin A8	BC073755|ANXA8|653145|annexin A8	Z36830|ANXA8|653145|annexin A8	BC004376|ANXA8|653145|annexin A8	NM_001098845|ANXA8L1|728113|annexin A8-like 1	X16662|ANXA8L2|244|annexin A8-like 2	AK300158|ANXA8|653145|annexin A8	AK223149|ANXA8L2|244|annexin A8-like 2	AK296573|ANXA8|653145|annexin A8	AK300139|ANXA8|653145|annexin A8	M81844|ANXA8|653145|annexin A8	DQ893430|ANXA8L2|244|annexin A8-like 2	DQ896775|ANXA8|653145|annexin A8
hg19_v1_chr7_-_112726143_112726848	0.00617804	LHX3,4.p2	AK297464|GPR85|54329|G protein-coupled receptor 85	AK312587|GPR85|54329|G protein-coupled receptor 85	NM_001146266|GPR85|54329|G protein-coupled receptor 85	AL161959|GPR85|54329|G protein-coupled receptor 85	NM_001146267|GPR85|54329|G protein-coupled receptor 85
hg19_v1_chr22_-_36236264_36236318	0.00607944	LHX3,4.p2	AY960684|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	CU013159|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	CU013447|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ891720|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ894897|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ894898|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2
hg19_v1_chr10_-_104262404_104262511	0.00605237	LHX3,4.p2	AM393135|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	DQ892689|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	DQ895934|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	BC026016|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	BC000693|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	Z14978|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	X82206|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK302072|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK312506|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK297362|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK297620|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	NM_005736|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
hg19_v1_chr1_+_213123853_213123982	0.00594298	LHX3,4.p2	AK290973|VASH2|79805|vasohibin 2	NM_001136474|VASH2|79805|vasohibin 2	NM_001136475|VASH2|79805|vasohibin 2	NM_024749|VASH2|79805|vasohibin 2	AK022567|VASH2|79805|vasohibin 2	AK096605|VASH2|79805|vasohibin 2	BC053836|VASH2|79805|vasohibin 2	BC051856|VASH2|79805|vasohibin 2	BC028194|VASH2|79805|vasohibin 2
hg19_v1_chr4_+_15471488_15471661	0.00589715	LHX3,4.p2	NM_001080522|CC2D2A|57545|coiled-coil and C2 domain containing 2A	NM_001164720|CC2D2A|57545|coiled-coil and C2 domain containing 2A	NM_020785|CC2D2A|57545|coiled-coil and C2 domain containing 2A	AK096047|CC2D2A|57545|coiled-coil and C2 domain containing 2A	AK309178|CC2D2A|57545|coiled-coil and C2 domain containing 2A	BX647334|CC2D2A|57545|coiled-coil and C2 domain containing 2A	BC061921|CC2D2A|57545|coiled-coil and C2 domain containing 2A	BC053865|CC2D2A|57545|coiled-coil and C2 domain containing 2A	BC070395|CC2D2A|57545|coiled-coil and C2 domain containing 2A	EU450799|CC2D2A|57545|coiled-coil and C2 domain containing 2A
hg19_v1_chr2_-_44586854_44586887	0.00581393	LHX3,4.p2	BC143061|PREPL|9581|prolyl endopeptidase-like	BC143062|PREPL|9581|prolyl endopeptidase-like	DQ023506|PREPL|9581|prolyl endopeptidase-like	DQ023507|PREPL|9581|prolyl endopeptidase-like	NM_001042385|PREPL|9581|prolyl endopeptidase-like	NM_001042386|PREPL|9581|prolyl endopeptidase-like
hg19_v1_chr3_-_147124595_147124595	0.00579711	LHX3,4.p2	NM_001243256|ZIC4|84107|Zic family member 4	NM_032153|ZIC4|84107|Zic family member 4
hg19_v1_chr20_+_23345020_23345020	0.0057965	LHX3,4.p2	AB100265|GZF1|64412|GDNF-inducible zinc finger protein 1	BC125188|GZF1|64412|GDNF-inducible zinc finger protein 1	BC154409|GZF1|64412|GDNF-inducible zinc finger protein 1	NM_022482|GZF1|64412|GDNF-inducible zinc finger protein 1
hg19_v1_chr12_-_102874321_102874323	0.00577355	LHX3,4.p2	AK312231|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X57025|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg19_v1_chr6_-_136788012_136788012	0.00571736	LHX3,4.p2	AK299355|MAP7|9053|microtubule-associated protein 7	NM_001198615|MAP7|9053|microtubule-associated protein 7
hg19_v1_chr7_-_112758611_112758647	0.00570901	LHX3,4.p2	BC107860|LOC401397|401397|uncharacterized LOC401397
hg19_v1_chrX_-_71458760_71458908	0.00569076	LHX3,4.p2	EU069463|ERCC6L|54821|excision repair cross-complementing rodent repair deficiency, complementation group 6-like	BC111486|ERCC6L|54821|excision repair cross-complementing rodent repair deficiency, complementation group 6-like	NM_017669|ERCC6L|54821|excision repair cross-complementing rodent repair deficiency, complementation group 6-like	AK056494|ERCC6L|54821|excision repair cross-complementing rodent repair deficiency, complementation group 6-like
hg19_v1_chr19_-_56704420_56704420	0.0056599	LHX3,4.p2	NM_001080456|ZSCAN5B|342933|zinc finger and SCAN domain containing 5B
hg19_v1_chr20_+_42136313_42136375	0.00565695	LHX3,4.p2	NM_032107|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)	AK299199|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)
hg19_v1_chr6_-_74161978_74162011	0.00562687	LHX3,4.p2	BC113606|MB21D1|115004|Mab-21 domain containing 1	BC113608|MB21D1|115004|Mab-21 domain containing 1	BC143694|MB21D1|115004|Mab-21 domain containing 1	BC012928|MB21D1|115004|Mab-21 domain containing 1	AK097148|MB21D1|115004|Mab-21 domain containing 1	BC108714|MB21D1|115004|Mab-21 domain containing 1
hg19_v1_chr1_+_150459873_150459911	0.00560274	LHX3,4.p2	AK298773|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK022590|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)	BC000541|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK315507|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK222814|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)	AY450558|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)
hg19_v1_chr14_+_103851693_103851713	0.00551083	LHX3,4.p2	NM_001128918|MARK3|4140|MAP/microtubule affinity-regulating kinase 3	NM_001128919|MARK3|4140|MAP/microtubule affinity-regulating kinase 3	NM_001128920|MARK3|4140|MAP/microtubule affinity-regulating kinase 3	NM_001128921|MARK3|4140|MAP/microtubule affinity-regulating kinase 3	NM_002376|MARK3|4140|MAP/microtubule affinity-regulating kinase 3
hg19_v1_chr4_+_91156181_91156181	0.00548977	LHX3,4.p2	BC051694|FAM190A|401145|family with sequence similarity 190, member A	NM_207491|FAM190A|401145|family with sequence similarity 190, member A
hg19_v1_chr17_+_78356710_78356831	0.00548558	LHX3,4.p2	AK023871|RNF213|57674|ring finger protein 213
hg19_v1_chr19_+_48949029_48949106	0.00547914	LHX3,4.p2	NM_031485|GRWD1|83743|glutamate-rich WD repeat containing 1	AK074676|GRWD1|83743|glutamate-rich WD repeat containing 1	AK300225|GRWD1|83743|glutamate-rich WD repeat containing 1
hg19_v1_chr15_-_56209305_56209328	0.0054383	LHX3,4.p2	BC136605|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	BC144284|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	BC144285|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	AL832063|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	NM_198400|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4
hg19_v1_chr3_+_159557649_159557738	0.00543339	LHX3,4.p2	NM_001197109|SCHIP1|29970|schwannomin interacting protein 1	AK091871|SCHIP1|29970|schwannomin interacting protein 1
hg19_v1_chr7_-_37488554_37488556	0.00541886	LHX3,4.p2	NM_014800|ELMO1|9844|engulfment and cell motility 1
hg19_v1_chr14_+_67831484_67831578	0.00529121	LHX3,4.p2	DQ892151|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	DQ895347|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg19_v1_chr3_+_148415657_148415717	0.00528174	LHX3,4.p2	NM_000685|AGTR1|185|angiotensin II receptor, type 1	NM_004835|AGTR1|185|angiotensin II receptor, type 1	NM_009585|AGTR1|185|angiotensin II receptor, type 1	NM_031850|AGTR1|185|angiotensin II receptor, type 1	AK291541|AGTR1|185|angiotensin II receptor, type 1	BC068494|AGTR1|185|angiotensin II receptor, type 1	BC022447|AGTR1|185|angiotensin II receptor, type 1	M87290|AGTR1|185|angiotensin II receptor, type 1	S77410|AGTR1|185|angiotensin II receptor, type 1	X65699|AGTR1|185|angiotensin II receptor, type 1
hg19_v1_chr1_+_186265404_186265410	0.00526775	LHX3,4.p2	NM_001127708|PRG4|10216|proteoglycan 4	NM_001127709|PRG4|10216|proteoglycan 4	NM_001127710|PRG4|10216|proteoglycan 4	NM_005807|PRG4|10216|proteoglycan 4	AK301343|PRG4|10216|proteoglycan 4	AK057197|PRG4|10216|proteoglycan 4	AK297718|PRG4|10216|proteoglycan 4	AK301487|PRG4|10216|proteoglycan 4	AK308235|PRG4|10216|proteoglycan 4
hg19_v1_chr10_-_52645384_52645402	0.00525113	LHX3,4.p2	BC022263|A1CF|29974|APOBEC1 complementation factor	AF209192|A1CF|29974|APOBEC1 complementation factor	AK291982|A1CF|29974|APOBEC1 complementation factor	AK303801|A1CF|29974|APOBEC1 complementation factor
hg19_v1_chr9_+_131549561_131549632	0.00515837	LHX3,4.p2	AK289777|TBC1D13|54662|TBC1 domain family, member 13	BC150311|TBC1D13|54662|TBC1 domain family, member 13	AK123828|TBC1D13|54662|TBC1 domain family, member 13	BC014898|TBC1D13|54662|TBC1 domain family, member 13	BC132817|TBC1D13|54662|TBC1 domain family, member 13	BC136509|TBC1D13|54662|TBC1 domain family, member 13	AK001605|TBC1D13|54662|TBC1 domain family, member 13	BC140080|TBC1D13|54662|TBC1 domain family, member 13	BC143010|TBC1D13|54662|TBC1 domain family, member 13	HQ258408|TBC1D13|54662|TBC1 domain family, member 13	AB449899|TBC1D13|54662|TBC1 domain family, member 13
hg19_v1_chr5_+_140771482_140771482	0.00515764	LHX3,4.p2	NM_014004|PCDHGA8|9708|protocadherin gamma subfamily A, 8	NM_032088|PCDHGA8|9708|protocadherin gamma subfamily A, 8
hg19_v1_chr5_-_149829231_149829258	0.00503331	LHX3,4.p2	BC020515|RPS14|6208|ribosomal protein S14
hg19_v1_chr11_+_22696318_22696354	0.00496854	LHX3,4.p2	NM_005256|GAS2|2620|growth arrest-specific 2	U95032|GAS2|2620|growth arrest-specific 2
hg19_v1_chr7_-_92777657_92777684	0.00490944	LHX3,4.p2	AF474973|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195582|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195583|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195584|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195585|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195586|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195587|SAMD9L|219285|sterile alpha motif domain containing 9-like	DQ068177|SAMD9L|219285|sterile alpha motif domain containing 9-like	AB095926|SAMD9L|219285|sterile alpha motif domain containing 9-like	NM_152703|SAMD9L|219285|sterile alpha motif domain containing 9-like
hg19_v1_chr4_+_2883636_2883767	0.00479915	LHX3,4.p2	AK025413|ADD1|118|adducin 1 (alpha)
hg19_v1_chr7_+_86273219_86273231	0.00476409	LHX3,4.p2	BC041407|GRM3|2913|glutamate receptor, metabotropic 3	NM_000840|GRM3|2913|glutamate receptor, metabotropic 3
hg19_v1_chr5_+_140729723_140729827	0.00475827	LHX3,4.p2	AF152330|PCDHGB1|56104|protocadherin gamma subfamily B, 1	AF152517|PCDHGB1|56104|protocadherin gamma subfamily B, 1	BC103926|PCDHGB1|56104|protocadherin gamma subfamily B, 1	BC103927|PCDHGB1|56104|protocadherin gamma subfamily B, 1	BC103928|PCDHGB1|56104|protocadherin gamma subfamily B, 1	NM_018922|PCDHGB1|56104|protocadherin gamma subfamily B, 1	NM_032095|PCDHGB1|56104|protocadherin gamma subfamily B, 1
hg19_v1_chr9_+_35042222_35042262	0.00474638	LHX3,4.p2	NM_001040410|C9orf131|138724|chromosome 9 open reading frame 131	NM_203299|C9orf131|138724|chromosome 9 open reading frame 131	BC045643|C9orf131|138724|chromosome 9 open reading frame 131	AK097595|C9orf131|138724|chromosome 9 open reading frame 131	AK302123|C9orf131|138724|chromosome 9 open reading frame 131
hg19_v1_chr16_+_24567628_24567629	0.00473756	LHX3,4.p2	BC029649|RBBP6|5930|retinoblastoma binding protein 6
hg19_v1_chr1_-_21437875_21437875	0.0047315	LHX3,4.p2	AF012072|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3	NM_003760|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg19_v1_chr13_-_103411421_103411421	0.0047023	LHX3,4.p2	NM_001146197|CCDC168|643677|coiled-coil domain containing 168
hg19_v1_chr4_+_41540187_41540224	0.00465416	LHX3,4.p2	BC023546|LIMCH1|22998|LIM and calponin homology domains 1
hg19_v1_chr6_+_158734902_158734937	0.0046324	LHX3,4.p2	
hg19_v1_chr3_-_114790221_114790260	0.00455669	LHX3,4.p2	BC090936|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164343|ZBTB20|26137|zinc finger and BTB domain containing 20
hg19_v1_chr11_+_65769409_65769549	0.00448825	LHX3,4.p2	AF068235|BANF1|8815|barrier to autointegration factor 1	NM_001143985|BANF1|8815|barrier to autointegration factor 1	NM_003860|BANF1|8815|barrier to autointegration factor 1
hg19_v1_chr2_+_189157551_189157612	0.00446557	LHX3,4.p2	BC068525|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	AF191771|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	AF200715|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	AF075014|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1
hg19_v1_chr4_+_158141735_158142034	0.00439622	LHX3,4.p2	NM_000826|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	NM_001083619|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	NM_001083620|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	BC028736|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	AL832605|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	AB209567|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	BC010574|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	L20814|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2
hg19_v1_chr17_-_38821286_38821415	0.00434935	LHX3,4.p2	BX538083|KRT222|125113|keratin 222	EU832123|KRT222|125113|keratin 222	EU832217|KRT222|125113|keratin 222	BC032815|KRT222|125113|keratin 222	AK308598|KRT222|125113|keratin 222	NM_152349|KRT222|125113|keratin 222
hg19_v1_chr22_-_38714088_38714088	0.00431333	LHX3,4.p2	AB024597|CSNK1E|1454|casein kinase 1, epsilon	NM_001894|CSNK1E|1454|casein kinase 1, epsilon
hg19_v1_chr21_-_27423423_27423464	0.00430431	LHX3,4.p2	
hg19_v1_chr2_-_216245573_216245728	0.00423872	LHX3,4.p2	U60067|FN1|2335|fibronectin 1	U60068|FN1|2335|fibronectin 1
hg19_v1_chr20_-_43729607_43729772	0.00421961	LHX3,4.p2	BC132957|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1	BC132959|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1	BC144234|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1	AK289735|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1	NM_002251|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1
hg19_v1_chr2_+_32502988_32503072	0.00416525	LHX3,4.p2	AB072898|YIPF4|84272|Yip1 domain family, member 4	BC004875|YIPF4|84272|Yip1 domain family, member 4
hg19_v1_chr19_+_47421932_47421932	0.00415581	LHX3,4.p2	AB051509|ARHGAP35|2909|Rho GTPase activating protein 35	AF159851|ARHGAP35|2909|Rho GTPase activating protein 35	BC131565|ARHGAP35|2909|Rho GTPase activating protein 35	BC150257|ARHGAP35|2909|Rho GTPase activating protein 35	NM_004491|ARHGAP35|2909|Rho GTPase activating protein 35
hg19_v1_chrX_+_37892786_37892786	0.00412701	LHX3,4.p2	NM_001163334|SYTL5|94122|synaptotagmin-like 5
hg19_v1_chr6_-_133119625_133119777	0.00411789	LHX3,4.p2	AK124442|C6orf192|116843|chromosome 6 open reading frame 192	BC069570|C6orf192|116843|chromosome 6 open reading frame 192	AK293853|C6orf192|116843|chromosome 6 open reading frame 192	NM_052831|C6orf192|116843|chromosome 6 open reading frame 192	AK289918|C6orf192|116843|chromosome 6 open reading frame 192
hg19_v1_chr1_+_43000559_43000559	0.00404442	LHX3,4.p2	NM_001080850|CCDC30|728621|coiled-coil domain containing 30
hg19_v1_chr2_-_200329810_200329830	0.00403315	LHX3,4.p2	AB209376|SATB2|23314|SATB homeobox 2	NM_001172517|SATB2|23314|SATB homeobox 2
hg19_v1_chr11_-_129062092_129062092	0.00402213	LHX3,4.p2	EF127492|ARHGAP32|9743|Rho GTPase activating protein 32	NM_001142685|ARHGAP32|9743|Rho GTPase activating protein 32
hg19_v1_chr3_+_157827849_157827933	0.00399798	LHX3,4.p2	AK290334|RSRC1|51319|arginine/serine-rich coiled-coil 1	BC006982|RSRC1|51319|arginine/serine-rich coiled-coil 1	NM_016625|RSRC1|51319|arginine/serine-rich coiled-coil 1	AF208853|RSRC1|51319|arginine/serine-rich coiled-coil 1	BC010357|RSRC1|51319|arginine/serine-rich coiled-coil 1
hg19_v1_chr7_-_112727832_112727848	0.00399549	LHX3,4.p2	NM_001146265|GPR85|54329|G protein-coupled receptor 85	NM_018970|GPR85|54329|G protein-coupled receptor 85
hg19_v1_chr14_+_58906398_58906455	0.00397456	LHX3,4.p2	AK302579|KIAA0586|9786|KIAA0586	NM_001244193|KIAA0586|9786|KIAA0586	AK310356|KIAA0586|9786|KIAA0586	AK302718|KIAA0586|9786|KIAA0586
hg19_v1_chr6_-_56507585_56507693	0.0039563	LHX3,4.p2	AF400226|DST|667|dystonin	AF400227|DST|667|dystonin	M69225|DST|667|dystonin	BC065536|DST|667|dystonin	L11690|DST|667|dystonin	NM_001723|DST|667|dystonin	NM_015548|DST|667|dystonin
hg19_v1_chr15_+_58724174_58724231	0.00395009	LHX3,4.p2	NM_000236|LIPC|3990|lipase, hepatic	X07228|LIPC|3990|lipase, hepatic	AK293324|LIPC|3990|lipase, hepatic	AK309448|LIPC|3990|lipase, hepatic	D83548|LIPC|3990|lipase, hepatic	BC132825|LIPC|3990|lipase, hepatic	BC136495|LIPC|3990|lipase, hepatic	J03895|LIPC|3990|lipase, hepatic	J03540|LIPC|3990|lipase, hepatic	HQ258274|LIPC|3990|lipase, hepatic
hg19_v1_chr6_+_34857021_34857179	0.00394397	LHX3,4.p2	BC022396|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	NM_015245|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	D86982|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	BC031934|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	AK298987|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	BC132832|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	BC144341|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A
hg19_v1_chr1_+_244214552_244214560	0.00389959	LHX3,4.p2	NM_205768|ZNF238|10472|zinc finger protein 238
hg19_v1_chr2_-_216241321_216241380	0.00388518	LHX3,4.p2	AK297733|FN1|2335|fibronectin 1
hg19_v1_chr8_-_30670323_30670380	0.0038788	LHX3,4.p2	NM_001009552|PPP2CB|5516|protein phosphatase 2, catalytic subunit, beta isozyme
hg19_v1_chr6_-_13408368_13408368	0.00386877	LHX3,4.p2	AK027010|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1	NM_001242630|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1
hg19_v1_chr22_-_41842432_41842479	0.00386814	LHX3,4.p2	CR456594|TOB2|10766|transducer of ERBB2, 2
hg19_v1_chr12_+_113376001_113376193	0.00382513	LHX3,4.p2	AB044545|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa
hg19_v1_chr14_+_71996041_71996041	0.00379112	LHX3,4.p2	AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1	AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1	NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1
hg19_v1_chr4_-_72649734_72650078	0.00379067	LHX3,4.p2	AK290827|GC|2638|group-specific component (vitamin D binding protein)	AK298433|GC|2638|group-specific component (vitamin D binding protein)	AK312971|GC|2638|group-specific component (vitamin D binding protein)	BC057228|GC|2638|group-specific component (vitamin D binding protein)	BC022310|GC|2638|group-specific component (vitamin D binding protein)	X03178|GC|2638|group-specific component (vitamin D binding protein)	AK315853|GC|2638|group-specific component (vitamin D binding protein)	NM_000583|GC|2638|group-specific component (vitamin D binding protein)
hg19_v1_chr2_+_185463235_185463252	0.00369769	LHX3,4.p2	BC150198|ZNF804A|91752|zinc finger protein 804A	AK131402|ZNF804A|91752|zinc finger protein 804A
hg19_v1_chr5_+_139876504_139876626	0.00366089	LHX3,4.p2	AF217646|ANKHD1|54882|ankyrin repeat and KH domain containing 1
hg19_v1_chr19_-_3557566_3557583	0.00365096	LHX3,4.p2	BC068439|MFSD12|126321|major facilitator superfamily domain containing 12	NM_001042680|MFSD12|126321|major facilitator superfamily domain containing 12	NM_021731|MFSD12|126321|major facilitator superfamily domain containing 12	NM_174983|MFSD12|126321|major facilitator superfamily domain containing 12
hg19_v1_chrM_+_9725_9967	0.00363699	LHX3,4.p2	
hg19_v1_chr5_-_149829264_149829318	0.00363363	LHX3,4.p2	BC003401|RPS14|6208|ribosomal protein S14	BC001126|RPS14|6208|ribosomal protein S14	BC006784|RPS14|6208|ribosomal protein S14	BC110792|RPS14|6208|ribosomal protein S14	AK312179|RPS14|6208|ribosomal protein S14	BC091474|RPS14|6208|ribosomal protein S14	NM_001025070|RPS14|6208|ribosomal protein S14	NM_001025071|RPS14|6208|ribosomal protein S14	NM_005617|RPS14|6208|ribosomal protein S14
hg19_v1_chr17_-_17140492_17140529	0.00362162	LHX3,4.p2	AK309336|FLCN|201163|folliculin	AK127912|FLCN|201163|folliculin	NM_144606|FLCN|201163|folliculin	NM_144997|FLCN|201163|folliculin
hg19_v1_chr12_-_81991959_81992149	0.00360442	LHX3,4.p2	AK294505|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	AK297372|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	AK299853|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	NM_001220477|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	NM_001220478|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
hg19_v1_chr18_-_51750998_51751157	0.00354438	LHX3,4.p2	AF072242|MBD2|8932|methyl-CpG binding domain protein 2	NM_003927|MBD2|8932|methyl-CpG binding domain protein 2	NM_015832|MBD2|8932|methyl-CpG binding domain protein 2
hg19_v1_chr6_+_34204928_34204935	0.00352051	LHX3,4.p2	M23614|HMGA1|3159|high mobility group AT-hook 1	M23615|HMGA1|3159|high mobility group AT-hook 1
hg19_v1_chr8_-_102803178_102803188	0.00351495	LHX3,4.p2	AB209015|NCALD|83988|neurocalcin delta	AL136612|NCALD|83988|neurocalcin delta
hg19_v1_chr2_+_234637772_234637772	0.00350983	LHX3,4.p2	AY435138|UGT1A3|54659|UDP glucuronosyltransferase 1 family, polypeptide A3	NM_019093|UGT1A3|54659|UDP glucuronosyltransferase 1 family, polypeptide A3
hg19_v1_chr2_+_109204904_109205034	0.00342778	LHX3,4.p2	BC005341|LIMS1|3987|LIM and senescent cell antigen-like domains 1	NM_001193488|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg19_v1_chr11_-_126870654_126870667	0.00341125	LHX3,4.p2	AB058770|KIRREL3|84623|kin of IRRE like 3 (Drosophila)	BC071838|KIRREL3|84623|kin of IRRE like 3 (Drosophila)
hg19_v1_chr22_-_36236421_36236629	0.00337914	LHX3,4.p2	AF229058|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	AL009266|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	AK314632|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	BC013115|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	BC025281|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	AK291460|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001031695|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001082576|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001082577|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_014309|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2
hg19_v1_chr2_+_187454724_187454936	0.00336616	LHX3,4.p2	AK302550|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)	AK309711|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)	NM_001145000|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)	NM_002210|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)	AB209894|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)	BC126231|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)	BC136442|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)	BC144100|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)
hg19_v1_chr3_-_27764197_27764205	0.00336027	LHX3,4.p2	AK299499|EOMES|8320|eomesodermin	AK299695|EOMES|8320|eomesodermin	AK297389|EOMES|8320|eomesodermin	AK297461|EOMES|8320|eomesodermin	AK316166|EOMES|8320|eomesodermin
hg19_v1_chr16_+_20817766_20817867	0.00330328	LHX3,4.p2	NM_001144924|LOC81691|81691|exonuclease NEF-sp	NM_001199053|LOC81691|81691|exonuclease NEF-sp	NM_030941|LOC81691|81691|exonuclease NEF-sp	BC007646|LOC81691|81691|exonuclease NEF-sp	AF332193|LOC81691|81691|exonuclease NEF-sp	AL136763|LOC81691|81691|exonuclease NEF-sp
hg19_v1_chr10_-_116251582_116251632	0.00320278	LHX3,4.p2	
hg19_v1_chr17_-_48207113_48207185	0.00310397	LHX3,4.p2	BC142728|SAMD14|201191|sterile alpha motif domain containing 14	BC136485|SAMD14|201191|sterile alpha motif domain containing 14	AY148482|SAMD14|201191|sterile alpha motif domain containing 14	NM_174920|SAMD14|201191|sterile alpha motif domain containing 14	AK291482|SAMD14|201191|sterile alpha motif domain containing 14	AK094209|SAMD14|201191|sterile alpha motif domain containing 14	AK225767|SAMD14|201191|sterile alpha motif domain containing 14	BC141822|SAMD14|201191|sterile alpha motif domain containing 14
hg19_v1_chr4_-_54457723_54457765	0.00308372	LHX3,4.p2	AK056823|LNX1|84708|ligand of numb-protein X 1	NM_001126328|LNX1|84708|ligand of numb-protein X 1
hg19_v1_chr7_-_30029904_30029904	0.003037	LHX3,4.p2	AK295172|SCRN1|9805|secernin 1	NM_001145514|SCRN1|9805|secernin 1
hg19_v1_chr3_-_48130633_48130768	0.00299023	LHX3,4.p2	AK054577|MAP4|4134|microtubule-associated protein 4	NM_001134364|MAP4|4134|microtubule-associated protein 4	NM_002375|MAP4|4134|microtubule-associated protein 4	NM_030885|MAP4|4134|microtubule-associated protein 4
hg19_v1_chr7_-_104909442_104909525	0.00298571	LHX3,4.p2	BC035214|SRPK2|6733|SRSF protein kinase 2	U88666|SRPK2|6733|SRSF protein kinase 2	NM_182691|SRPK2|6733|SRSF protein kinase 2
hg19_v1_chr1_+_14031349_14031349	0.00298128	LHX3,4.p2	NM_012231|PRDM2|7799|PR domain containing 2, with ZNF domain	NM_015866|PRDM2|7799|PR domain containing 2, with ZNF domain	U17838|PRDM2|7799|PR domain containing 2, with ZNF domain
hg19_v1_chr8_+_132991171_132991247	0.00293843	LHX3,4.p2	BX648595|EFR3A|23167|EFR3 homolog A (S. cerevisiae)
hg19_v1_chr1_+_40862471_40862506	0.00286834	LHX3,4.p2	AK316218|SMAP2|64744|small ArfGAP2	NM_001198980|SMAP2|64744|small ArfGAP2	AK298702|SMAP2|64744|small ArfGAP2
hg19_v1_chr5_+_73109342_73109359	0.00286341	LHX3,4.p2	AK304761|RGNEF|64283|190 kDa guanine nucleotide exchange factor	NM_001244364|RGNEF|64283|190 kDa guanine nucleotide exchange factor
hg19_v1_chr12_-_24102563_24102641	0.00285884	LHX3,4.p2	AK074317|SOX5|6660|SRY (sex determining region Y)-box 5	BC065532|SOX5|6660|SRY (sex determining region Y)-box 5	AB081589|SOX5|6660|SRY (sex determining region Y)-box 5	NM_006940|SOX5|6660|SRY (sex determining region Y)-box 5
hg19_v1_chr18_+_616671_616719	0.0028463	LHX3,4.p2	DQ980621|CLUL1|27098|clusterin-like 1 (retinal)	NM_199167|CLUL1|27098|clusterin-like 1 (retinal)	AF395889|CLUL1|27098|clusterin-like 1 (retinal)	D63813|CLUL1|27098|clusterin-like 1 (retinal)
hg19_v1_chr17_-_17140425_17140466	0.00284119	LHX3,4.p2	AF517523|FLCN|201163|folliculin	BC015687|FLCN|201163|folliculin
hg19_v1_chr14_-_69262959_69263010	0.00279915	LHX3,4.p2	NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1
hg19_v1_chr1_-_89357181_89357242	0.00275577	LHX3,4.p2	AB451296|GTF2B|2959|general transcription factor IIB	EU446894|GTF2B|2959|general transcription factor IIB	M76766|GTF2B|2959|general transcription factor IIB
hg19_v1_chr20_+_30697512_30697570	0.00274433	LHX3,4.p2	AK126534|TM9SF4|9777|transmembrane 9 superfamily protein member 4	AK294980|TM9SF4|9777|transmembrane 9 superfamily protein member 4	AK296500|TM9SF4|9777|transmembrane 9 superfamily protein member 4	AK302439|TM9SF4|9777|transmembrane 9 superfamily protein member 4	BC021107|TM9SF4|9777|transmembrane 9 superfamily protein member 4	D87444|TM9SF4|9777|transmembrane 9 superfamily protein member 4
hg19_v1_chr16_-_66583587_66583780	0.00273815	LHX3,4.p2	U80628|TK2|7084|thymidine kinase 2, mitochondrial	AK302976|TK2|7084|thymidine kinase 2, mitochondrial
hg19_v1_chr4_-_46125929_46126097	0.00271941	LHX3,4.p2	DQ890976|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	DQ894150|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	CR933628|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	BC031087|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	AK289806|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	AK299884|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	BX648937|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	NM_173536|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	AK122845|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1
hg19_v1_chr3_+_159557745_159557973	0.00271056	LHX3,4.p2	BC005947|SCHIP1|29970|schwannomin interacting protein 1
hg19_v1_chr3_-_111314181_111314181	0.00270712	LHX3,4.p2	NM_024508|ZBED2|79413|zinc finger, BED-type containing 2
hg19_v1_chrM_+_11427_11608	0.00266686	LHX3,4.p2	
hg19_v1_chr2_-_55559749_55559823	0.00262719	LHX3,4.p2	BC056885|CCDC88A|55704|coiled-coil domain containing 88A
hg19_v1_chr19_-_50413063_50413142	0.00261862	LHX3,4.p2	CR541721|NUP62|23636|nucleoporin 62kDa	AM393785|NUP62|23636|nucleoporin 62kDa	DQ892591|NUP62|23636|nucleoporin 62kDa	DQ896857|NUP62|23636|nucleoporin 62kDa	BC014842|NUP62|23636|nucleoporin 62kDa
hg19_v1_chr2_-_134179325_134179384	0.00260355	LHX3,4.p2	AK092189|NCKAP5|344148|NCK-associated protein 5
hg19_v1_chrX_-_102942968_102943085	0.00253103	LHX3,4.p2	AK302083|MORF4L2|9643|mortality factor 4 like 2	AK056012|MORF4L2|9643|mortality factor 4 like 2	NM_001142419|MORF4L2|9643|mortality factor 4 like 2	NM_001142420|MORF4L2|9643|mortality factor 4 like 2	NM_001142421|MORF4L2|9643|mortality factor 4 like 2	NM_001142422|MORF4L2|9643|mortality factor 4 like 2	NM_001142427|MORF4L2|9643|mortality factor 4 like 2	NM_001142428|MORF4L2|9643|mortality factor 4 like 2	NM_001142431|MORF4L2|9643|mortality factor 4 like 2	NM_001142432|MORF4L2|9643|mortality factor 4 like 2
hg19_v1_chr1_+_66797775_66797932	0.00251089	LHX3,4.p2	NM_001037339|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	M97515|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	L12686|PDE4B|5142|phosphodiesterase 4B, cAMP-specific
hg19_v1_chr2_+_234296799_234296799	0.00250959	LHX3,4.p2	D73409|DGKD|8527|diacylglycerol kinase, delta 130kDa	NM_003648|DGKD|8527|diacylglycerol kinase, delta 130kDa
hg19_v1_chrX_-_130423387_130423438	0.00249391	LHX3,4.p2	NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1	NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1	NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1	NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1
hg19_v1_chr14_-_88793250_88793255	0.00247516	LHX3,4.p2	AF279890|KCNK10|54207|potassium channel, subfamily K, member 10	NM_021161|KCNK10|54207|potassium channel, subfamily K, member 10
hg19_v1_chr1_+_110543548_110543548	0.00246624	LHX3,4.p2	NM_001242674|AHCYL1|10768|adenosylhomocysteinase-like 1
hg19_v1_chr6_+_158438079_158438266	0.00243259	LHX3,4.p2	NM_001178088|SYNJ2|8871|synaptojanin 2	BX648749|SYNJ2|8871|synaptojanin 2	AB002346|SYNJ2|8871|synaptojanin 2	AF039945|SYNJ2|8871|synaptojanin 2
hg19_v1_chr4_-_100212085_100212184	0.00238991	LHX3,4.p2	M12271|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	BC074738|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	BC117442|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	BC126306|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	AK290558|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	M12963|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	AK309597|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	NM_000667|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide
hg19_v1_chr10_+_6130936_6130963	0.00235954	LHX3,4.p2	NM_032905|RBM17|84991|RNA binding motif protein 17
hg19_v1_chr17_-_62340571_62340601	0.00235807	LHX3,4.p2	AL832371|TEX2|55852|testis expressed 2	BC040521|TEX2|55852|testis expressed 2	AL834251|TEX2|55852|testis expressed 2	AK091214|TEX2|55852|testis expressed 2
hg19_v1_chr20_+_42187634_42187666	0.00232716	LHX3,4.p2	NM_170693|SGK2|10110|serum/glucocorticoid regulated kinase 2	AK308502|SGK2|10110|serum/glucocorticoid regulated kinase 2
hg19_v1_chr4_-_122137781_122137781	0.00231347	LHX3,4.p2	AK301058|TNIP3|79931|TNFAIP3 interacting protein 3	NM_001128843|TNIP3|79931|TNFAIP3 interacting protein 3
hg19_v1_chr12_-_15091441_15091482	0.00227499	LHX3,4.p2	BC030218|ERP27|121506|endoplasmic reticulum protein 27	AY358536|ERP27|121506|endoplasmic reticulum protein 27	NM_152321|ERP27|121506|endoplasmic reticulum protein 27	AK056677|ERP27|121506|endoplasmic reticulum protein 27
hg19_v1_chr12_-_48745020_48745028	0.00223503	LHX3,4.p2	AK298064|ZNF641|121274|zinc finger protein 641	NM_001172682|ZNF641|121274|zinc finger protein 641
hg19_v1_chr1_+_203595897_203595922	0.00213973	LHX3,4.p2	NM_001001396|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4	NM_001684|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4
hg19_v1_chr8_+_26435920_26435934	0.0021205	LHX3,4.p2	NM_001244604|DPYSL2|1808|dihydropyrimidinase-like 2	AK299077|DPYSL2|1808|dihydropyrimidinase-like 2
hg19_v1_chr1_-_173886464_173886515	0.00208873	LHX3,4.p2	AK312654|SERPINC1|462|serpin peptidase inhibitor, clade C (antithrombin), member 1	BC022309|SERPINC1|462|serpin peptidase inhibitor, clade C (antithrombin), member 1	NM_000488|SERPINC1|462|serpin peptidase inhibitor, clade C (antithrombin), member 1
hg19_v1_chr11_-_126870685_126870765	0.00201195	LHX3,4.p2	AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)	NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)	NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)
hg19_v1_chr20_+_37101457_37101559	0.00198855	LHX3,4.p2	AB033045|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)	BC047482|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)	NM_020336|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)	AK304242|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)	CR936800|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)
hg19_v1_chrX_+_77166223_77166262	0.00198378	LHX3,4.p2	AB117973|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide	AB208828|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide
hg19_v1_chr8_+_92261515_92261546	0.0019784	LHX3,4.p2	AJ413229|SLC26A7|115111|solute carrier family 26, member 7	NM_052832|SLC26A7|115111|solute carrier family 26, member 7	NM_134266|SLC26A7|115111|solute carrier family 26, member 7	AF331521|SLC26A7|115111|solute carrier family 26, member 7	AJ413228|SLC26A7|115111|solute carrier family 26, member 7	AJ413230|SLC26A7|115111|solute carrier family 26, member 7
hg19_v1_chr10_+_35484829_35484831	0.00196608	LHX3,4.p2	AK289379|CREM|1390|cAMP responsive element modulator	NM_182721|CREM|1390|cAMP responsive element modulator	NM_182722|CREM|1390|cAMP responsive element modulator	NM_182723|CREM|1390|cAMP responsive element modulator	NM_182724|CREM|1390|cAMP responsive element modulator	NM_182725|CREM|1390|cAMP responsive element modulator	AK291566|CREM|1390|cAMP responsive element modulator
hg19_v1_chr14_+_96846021_96846021	0.00196592	LHX3,4.p2	BC004818|C14orf129|51527|chromosome 14 open reading frame 129	NM_016472|C14orf129|51527|chromosome 14 open reading frame 129
hg19_v1_chr6_+_134273307_134273422	0.00190118	LHX3,4.p2	NM_001253676|TBPL1|9519|TBP-like 1	AK292320|TBPL1|9519|TBP-like 1
hg19_v1_chr6_-_74161824_74161939	0.00182869	LHX3,4.p2	HQ258303|MB21D1|115004|Mab-21 domain containing 1
hg19_v1_chr8_-_77913279_77913279	0.00165569	LHX3,4.p2	NM_001172086|PEX2|5828|peroxisomal biogenesis factor 2	NM_001172087|PEX2|5828|peroxisomal biogenesis factor 2
hg19_v1_chr7_-_64023454_64023504	0.00164246	LHX3,4.p2	AK122937|ZNF680|340252|zinc finger protein 680	BC030700|ZNF680|340252|zinc finger protein 680	NM_001130022|ZNF680|340252|zinc finger protein 680	NM_178558|ZNF680|340252|zinc finger protein 680
hg19_v1_chr3_+_142342265_142342343	0.00161146	LHX3,4.p2	NM_002670|PLS1|5357|plastin 1	L20826|PLS1|5357|plastin 1
hg19_v1_chr1_-_51887740_51887792	0.00160631	LHX3,4.p2	AK090936|EPS15|2060|epidermal growth factor receptor pathway substrate 15	AK308128|EPS15|2060|epidermal growth factor receptor pathway substrate 15	BX647676|EPS15|2060|epidermal growth factor receptor pathway substrate 15	NM_001159969|EPS15|2060|epidermal growth factor receptor pathway substrate 15
hg19_v1_chr10_+_91498724_91498811	0.00156304	LHX3,4.p2	AK025628|KIF20B|9585|kinesin family member 20B
hg19_v1_chr1_-_33430285_33430508	0.00145371	LHX3,4.p2	NM_001127361|RNF19B|127544|ring finger protein 19B	NM_153341|RNF19B|127544|ring finger protein 19B	AK131439|RNF19B|127544|ring finger protein 19B
hg19_v1_chr1_+_160175114_160175144	0.00144373	LHX3,4.p2	NM_003768|PEA15|8682|phosphoprotein enriched in astrocytes 15	BC022554|PEA15|8682|phosphoprotein enriched in astrocytes 15
hg19_v1_chr15_+_52201590_52201630	0.00140417	LHX3,4.p2	AK025704|TMOD3|29766|tropomodulin 3 (ubiquitous)
hg19_v1_chr14_-_77889231_77889398	0.00139636	LHX3,4.p2	BC066965|NOXRED1|122945|NADP-dependent oxidoreductase domain containing 1	AK057371|NOXRED1|122945|NADP-dependent oxidoreductase domain containing 1	NM_001113475|NOXRED1|122945|NADP-dependent oxidoreductase domain containing 1
hg19_v1_chr6_-_56716713_56716715	0.00134406	LHX3,4.p2	AK299898|DST|667|dystonin
hg19_v1_chrX_+_65384078_65384206	0.00134348	LHX3,4.p2	NM_001130860|HEPH|9843|hephaestin	AK311043|HEPH|9843|hephaestin	AB014598|HEPH|9843|hephaestin	NM_014799|HEPH|9843|hephaestin	AY358990|HEPH|9843|hephaestin	AK307761|HEPH|9843|hephaestin
hg19_v1_chr9_-_34620483_34620488	0.00133607	LHX3,4.p2	BC107697|DCTN3|11258|dynactin 3 (p22)	AK314730|DCTN3|11258|dynactin 3 (p22)
hg19_v1_chrX_+_135278912_135279269	0.00132169	LHX3,4.p2	NM_001159701|FHL1|2273|four and a half LIM domains 1	AK301642|FHL1|2273|four and a half LIM domains 1	NM_001159699|FHL1|2273|four and a half LIM domains 1	AK299381|FHL1|2273|four and a half LIM domains 1	AK299379|FHL1|2273|four and a half LIM domains 1	AK299450|FHL1|2273|four and a half LIM domains 1	BC088369|FHL1|2273|four and a half LIM domains 1	EU832162|FHL1|2273|four and a half LIM domains 1	EU832256|FHL1|2273|four and a half LIM domains 1
hg19_v1_chrX_+_43515441_43515519	0.00129117	LHX3,4.p2	M68840|MAOA|4128|monoamine oxidase A
hg19_v1_chr10_+_97803064_97803699	0.00123926	LHX3,4.p2	BC043175|CCNJ|54619|cyclin J	NM_001134375|CCNJ|54619|cyclin J	NM_001134376|CCNJ|54619|cyclin J	NM_019084|CCNJ|54619|cyclin J	AK092360|CCNJ|54619|cyclin J	AK297264|CCNJ|54619|cyclin J
hg19_v1_chr5_-_13944588_13944588	0.00119509	LHX3,4.p2	AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5	NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5
hg19_v1_chr6_+_114178516_114178953	0.00115095	LHX3,4.p2	AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate
hg19_v1_chr2_+_201170603_201170615	0.00114777	LHX3,4.p2	NM_015535|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK290496|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like
hg19_v1_chr2_-_152118258_152118409	0.00113951	LHX3,4.p2	BC136410|RBM43|375287|RNA binding motif protein 43	BC136411|RBM43|375287|RNA binding motif protein 43	AK127552|RBM43|375287|RNA binding motif protein 43	NM_198557|RBM43|375287|RNA binding motif protein 43
hg19_v1_chr4_+_160188997_160188997	0.0011172	LHX3,4.p2	AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2	NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2
hg19_v1_chr7_-_140714780_140714792	0.00111628	LHX3,4.p2	NM_053035|MRPS33|51650|mitochondrial ribosomal protein S33
hg19_v1_chr7_-_134001749_134001826	0.00104041	LHX3,4.p2	AB052892|SLC35B4|84912|solute carrier family 35, member B4	NM_032826|SLC35B4|84912|solute carrier family 35, member B4
hg19_v1_chr16_+_24788568_24788680	0.000993515	LHX3,4.p2	AY035864|TNRC6A|27327|trinucleotide repeat containing 6A
hg19_v1_chr17_-_4938699_4938726	0.000967978	LHX3,4.p2	AB362534|GPR172B|55065|G protein-coupled receptor 172B	AK023570|GPR172B|55065|G protein-coupled receptor 172B	AB362533|GPR172B|55065|G protein-coupled receptor 172B	BC060810|GPR172B|55065|G protein-coupled receptor 172B	NM_001104577|GPR172B|55065|G protein-coupled receptor 172B	NM_017986|GPR172B|55065|G protein-coupled receptor 172B
hg19_v1_chrX_+_43515531_43515593	0.000907097	LHX3,4.p2	AK293926|MAOA|4128|monoamine oxidase A	AK291769|MAOA|4128|monoamine oxidase A	BC008064|MAOA|4128|monoamine oxidase A	DQ890676|MAOA|4128|monoamine oxidase A	DQ893857|MAOA|4128|monoamine oxidase A	BT006651|MAOA|4128|monoamine oxidase A
hg19_v1_chrX_+_57618268_57618268	0.000895684	LHX3,4.p2	NM_007157|ZXDB|158586|zinc finger, X-linked, duplicated B
hg19_v1_chr3_+_69812620_69812706	0.00087679	LHX3,4.p2	AK296129|MITF|4286|microphthalmia-associated transcription factor	NM_001184967|MITF|4286|microphthalmia-associated transcription factor
hg19_v1_chr6_+_27777713_27777851	0.000867964	LHX3,4.p2	BC007518|HIST1H3H|8357|histone cluster 1, H3h	AK311991|HIST1H3H|8357|histone cluster 1, H3h	NM_003536|HIST1H3H|8357|histone cluster 1, H3h	EU446975|HIST1H3H|8357|histone cluster 1, H3h	BC096128|HIST1H3H|8357|histone cluster 1, H3h	BC096129|HIST1H3H|8357|histone cluster 1, H3h	BC096130|HIST1H3H|8357|histone cluster 1, H3h	BC143046|HIST1H3H|8357|histone cluster 1, H3h	BC148243|HIST1H3H|8357|histone cluster 1, H3h	BC148250|HIST1H3H|8357|histone cluster 1, H3h
hg19_v1_chr7_-_112727799_112727815	0.000863911	LHX3,4.p2	AK309392|GPR85|54329|G protein-coupled receptor 85	AF250237|GPR85|54329|G protein-coupled receptor 85	AK302769|GPR85|54329|G protein-coupled receptor 85
hg19_v1_chr6_+_158734476_158734584	0.000857733	LHX3,4.p2	AK304056|TULP4|56995|tubby like protein 4
hg19_v1_chr17_-_16256824_16256843	0.000798819	LHX3,4.p2	BC137486|CENPV|201161|centromere protein V	BC137487|CENPV|201161|centromere protein V
hg19_v1_chr1_-_39347258_39347297	0.000782046	LHX3,4.p2	AK312811|GJA9|81025|gap junction protein, alpha 9, 59kDa	BC051675|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough	AK123051|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough	NM_030772|GJA9|81025|gap junction protein, alpha 9, 59kDa
hg19_v1_chr2_+_109204745_109204767	0.000748179	LHX3,4.p2	NM_004987|LIMS1|3987|LIM and senescent cell antigen-like domains 1	U09284|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg19_v1_chr1_+_203596222_203596243	0.000744652	LHX3,4.p2	BC140774|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4
hg19_v1_chr17_-_16256708_16256817	0.000727283	LHX3,4.p2	AF514992|CENPV|201161|centromere protein V	NM_181716|CENPV|201161|centromere protein V	BC052604|CENPV|201161|centromere protein V
hg19_v1_chrX_+_49091979_49092095	0.000722244	LHX3,4.p2	BC000972|CCDC22|28952|coiled-coil domain containing 22	AK316375|CCDC22|28952|coiled-coil domain containing 22	AJ005890|CCDC22|28952|coiled-coil domain containing 22	DQ894170|CCDC22|28952|coiled-coil domain containing 22	EU176573|CCDC22|28952|coiled-coil domain containing 22	BC011675|CCDC22|28952|coiled-coil domain containing 22
hg19_v1_chr3_+_180320955_180320972	0.000699007	LHX3,4.p2	AB075860|TTC14|151613|tetratricopeptide repeat domain 14
hg19_v1_chr16_-_66583952_66584033	0.000690257	LHX3,4.p2	AK294627|TK2|7084|thymidine kinase 2, mitochondrial	AK295808|TK2|7084|thymidine kinase 2, mitochondrial	AK316226|TK2|7084|thymidine kinase 2, mitochondrial
hg19_v1_chr1_+_203595929_203595989	0.00067277	LHX3,4.p2	CR936708|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4	CR749393|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4
hg19_v1_chrX_+_7137471_7137532	0.000661266	LHX3,4.p2	NM_000351|STS|412|steroid sulfatase (microsomal), isozyme S	M16505|STS|412|steroid sulfatase (microsomal), isozyme S	J04964|STS|412|steroid sulfatase (microsomal), isozyme S	AK314034|STS|412|steroid sulfatase (microsomal), isozyme S
hg19_v1_chrX_+_119737743_119737834	0.000623814	LHX3,4.p2	NM_014060|MCTS1|28985|malignant T cell amplified sequence 1	AK311993|MCTS1|28985|malignant T cell amplified sequence 1	AB034206|MCTS1|28985|malignant T cell amplified sequence 1
hg19_v1_chr10_-_115423640_115423804	0.000620428	LHX3,4.p2	AM392642|NRAP|4892|nebulin-related anchoring protein	AM393530|NRAP|4892|nebulin-related anchoring protein	BC126407|NRAP|4892|nebulin-related anchoring protein	BC143751|NRAP|4892|nebulin-related anchoring protein	AL831980|NRAP|4892|nebulin-related anchoring protein	AL832025|NRAP|4892|nebulin-related anchoring protein	AL832330|NRAP|4892|nebulin-related anchoring protein	BX640682|NRAP|4892|nebulin-related anchoring protein	AY177620|NRAP|4892|nebulin-related anchoring protein	AY177621|NRAP|4892|nebulin-related anchoring protein	BX641052|NRAP|4892|nebulin-related anchoring protein	BC005933|NRAP|4892|nebulin-related anchoring protein	BC017866|NRAP|4892|nebulin-related anchoring protein	BC058825|NRAP|4892|nebulin-related anchoring protein	BC070130|NRAP|4892|nebulin-related anchoring protein	AK056969|NRAP|4892|nebulin-related anchoring protein	AY081943|NRAP|4892|nebulin-related anchoring protein	NM_006175|NRAP|4892|nebulin-related anchoring protein	NM_198060|NRAP|4892|nebulin-related anchoring protein
hg19_v1_chr12_+_52056547_52056601	0.000552917	LHX3,4.p2	NM_001177984|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit	AF225988|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit	FJ611941|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit
hg19_v1_chr3_-_33700932_33701071	0.000532316	LHX3,4.p2	NM_001207044|CLASP2|23122|cytoplasmic linker associated protein 2
hg19_v1_chr5_+_95066628_95067109	0.000518791	LHX3,4.p2	BC047884|RHOBTB3|22836|Rho-related BTB domain containing 3	NM_014899|RHOBTB3|22836|Rho-related BTB domain containing 3	BC020231|RHOBTB3|22836|Rho-related BTB domain containing 3	BC013169|RHOBTB3|22836|Rho-related BTB domain containing 3	BC041337|RHOBTB3|22836|Rho-related BTB domain containing 3	AB020685|RHOBTB3|22836|Rho-related BTB domain containing 3	AK290034|RHOBTB3|22836|Rho-related BTB domain containing 3
hg19_v1_chr16_-_52581713_52581713	0.000508784	LHX3,4.p2	AK299202|TOX3|27324|TOX high mobility group box family member 3	NM_001146188|TOX3|27324|TOX high mobility group box family member 3
hg19_v1_chr22_+_41697452_41697577	0.00050307	LHX3,4.p2	BC152558|ZC3H7B|23264|zinc finger CCCH-type containing 7B	AK225891|ZC3H7B|23264|zinc finger CCCH-type containing 7B	AK315009|ZC3H7B|23264|zinc finger CCCH-type containing 7B	NM_017590|ZC3H7B|23264|zinc finger CCCH-type containing 7B	BC098378|ZC3H7B|23264|zinc finger CCCH-type containing 7B
hg19_v1_chr11_+_126173954_126173984	0.000499124	LHX3,4.p2	AK307403|DCPS|28960|decapping enzyme, scavenger	BC014532|DCPS|28960|decapping enzyme, scavenger	AF077201|DCPS|28960|decapping enzyme, scavenger	AY077684|DCPS|28960|decapping enzyme, scavenger
hg19_v1_chr7_-_112727778_112727783	0.000472521	LHX3,4.p2	BC030577|GPR85|54329|G protein-coupled receptor 85
hg19_v1_chr8_-_80993009_80993050	0.000468522	LHX3,4.p2	AF202897|TPD52|7163|tumor protein D52	EF152584|TPD52|7163|tumor protein D52	NM_001025252|TPD52|7163|tumor protein D52	GQ499324|TPD52|7163|tumor protein D52	GQ499325|TPD52|7163|tumor protein D52	GQ499326|TPD52|7163|tumor protein D52	GQ499327|TPD52|7163|tumor protein D52	GQ499328|TPD52|7163|tumor protein D52
hg19_v1_chr14_+_78870092_78870092	0.000464996	LHX3,4.p2	AB018286|NRXN3|9369|neurexin 3	BC152457|NRXN3|9369|neurexin 3	NM_004796|NRXN3|9369|neurexin 3
hg19_v1_chr5_+_145316120_145316223	0.000359726	LHX3,4.p2	NM_152550|SH3RF2|153769|SH3 domain containing ring finger 2	AK074234|SH3RF2|153769|SH3 domain containing ring finger 2	AK292576|SH3RF2|153769|SH3 domain containing ring finger 2	BC125106|SH3RF2|153769|SH3 domain containing ring finger 2	BC125107|SH3RF2|153769|SH3 domain containing ring finger 2
hg19_v1_chr19_-_55767103_55767150	0.000326764	LHX3,4.p2	AK297152|PPP6R1|22870|protein phosphatase 6, regulatory subunit 1
hg19_v1_chr11_+_64051810_64051810	0.000325527	LHX3,4.p2	AK300209|GPR137|56834|G protein-coupled receptor 137	NM_001170726|GPR137|56834|G protein-coupled receptor 137
hg19_v1_chr2_-_101925051_101925234	0.000320458	LHX3,4.p2	AM392566|RNF149|284996|ring finger protein 149	BC019355|RNF149|284996|ring finger protein 149	BC032328|RNF149|284996|ring finger protein 149	AK074985|RNF149|284996|ring finger protein 149	AK075141|RNF149|284996|ring finger protein 149	AY450390|RNF149|284996|ring finger protein 149	BC045743|RNF149|284996|ring finger protein 149	AK129799|RNF149|284996|ring finger protein 149	NM_173647|RNF149|284996|ring finger protein 149
hg19_v1_chr2_-_227663454_227663505	0.000275255	LHX3,4.p2	EU831611|IRS1|3667|insulin receptor substrate 1	EU831698|IRS1|3667|insulin receptor substrate 1	BC053895|IRS1|3667|insulin receptor substrate 1	NM_005544|IRS1|3667|insulin receptor substrate 1
hg19_v1_chr7_-_140714730_140714770	0.000211615	LHX3,4.p2	AF078858|MRPS33|51650|mitochondrial ribosomal protein S33	BC105793|MRPS33|51650|mitochondrial ribosomal protein S33
hg19_v1_chr6_+_158733691_158733703	0.000208665	LHX3,4.p2	AB037818|TULP4|56995|tubby like protein 4	AF219946|TULP4|56995|tubby like protein 4	AF288480|TULP4|56995|tubby like protein 4	BC152476|TULP4|56995|tubby like protein 4	NM_001007466|TULP4|56995|tubby like protein 4	NM_020245|TULP4|56995|tubby like protein 4
hg19_v1_chr2_-_37076016_37076045	0.000200865	LHX3,4.p2	BC015406|STRN|6801|striatin, calmodulin binding protein
hg19_v1_chr6_-_24877453_24877582	0.000191726	LHX3,4.p2	U49187|FAM65B|9750|family with sequence similarity 65, member B	AK300138|FAM65B|9750|family with sequence similarity 65, member B	BC001232|FAM65B|9750|family with sequence similarity 65, member B	NM_015864|FAM65B|9750|family with sequence similarity 65, member B
hg19_v1_chr1_+_167691156_167691500	0.000186287	LHX3,4.p2	NM_001146191|MPZL1|9019|myelin protein zero-like 1	NM_003953|MPZL1|9019|myelin protein zero-like 1	NM_024569|MPZL1|9019|myelin protein zero-like 1	AK297112|MPZL1|9019|myelin protein zero-like 1	AK075334|MPZL1|9019|myelin protein zero-like 1	AK307250|MPZL1|9019|myelin protein zero-like 1	AK291249|MPZL1|9019|myelin protein zero-like 1	AY359019|MPZL1|9019|myelin protein zero-like 1	AF181660|MPZL1|9019|myelin protein zero-like 1	AF478447|MPZL1|9019|myelin protein zero-like 1	BC000984|MPZL1|9019|myelin protein zero-like 1	BC007881|MPZL1|9019|myelin protein zero-like 1	AF095727|MPZL1|9019|myelin protein zero-like 1	AF087020|MPZL1|9019|myelin protein zero-like 1	AF092425|MPZL1|9019|myelin protein zero-like 1	AF095726|MPZL1|9019|myelin protein zero-like 1	AK315546|MPZL1|9019|myelin protein zero-like 1	AF239756|MPZL1|9019|myelin protein zero-like 1	BT019542|MPZL1|9019|myelin protein zero-like 1	CR542160|MPZL1|9019|myelin protein zero-like 1	HQ447352|MPZL1|9019|myelin protein zero-like 1
hg19_v1_chr20_+_5986560_5986760	0.000185321	LHX3,4.p2	NM_019095|CRLS1|54675|cardiolipin synthase 1
hg19_v1_chr4_-_122148620_122148620	0.000174269	LHX3,4.p2	AK303192|TNIP3|79931|TNFAIP3 interacting protein 3	NM_001244764|TNIP3|79931|TNFAIP3 interacting protein 3
hg19_v1_chr1_+_36387788_36387930	0.000164037	LHX3,4.p2	AK000326|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1
hg19_v1_chr2_+_172821874_172822000	0.00011743	LHX3,4.p2	BC018682|HAT1|8520|histone acetyltransferase 1
hg19_v1_chr15_-_42749710_42749764	0.000107326	LHX3,4.p2	AL831983|ZFP106|64397|zinc finger protein 106 homolog (mouse)	BC029366|ZFP106|64397|zinc finger protein 106 homolog (mouse)	BC070244|ZFP106|64397|zinc finger protein 106 homolog (mouse)	AF205632|ZFP106|64397|zinc finger protein 106 homolog (mouse)	BC058023|ZFP106|64397|zinc finger protein 106 homolog (mouse)	BC111396|ZFP106|64397|zinc finger protein 106 homolog (mouse)	NM_022473|ZFP106|64397|zinc finger protein 106 homolog (mouse)	AK294529|ZFP106|64397|zinc finger protein 106 homolog (mouse)	AK091929|ZFP106|64397|zinc finger protein 106 homolog (mouse)
hg19_v1_chr10_+_104263726_104263913	6.08535e-05	LHX3,4.p2	AK312319|SUFU|51684|suppressor of fused homolog (Drosophila)	BC013291|SUFU|51684|suppressor of fused homolog (Drosophila)	AF175770|SUFU|51684|suppressor of fused homolog (Drosophila)	AF144231|SUFU|51684|suppressor of fused homolog (Drosophila)	AF159447|SUFU|51684|suppressor of fused homolog (Drosophila)	AY358550|SUFU|51684|suppressor of fused homolog (Drosophila)	AF222345|SUFU|51684|suppressor of fused homolog (Drosophila)	DQ892586|SUFU|51684|suppressor of fused homolog (Drosophila)	DQ895804|SUFU|51684|suppressor of fused homolog (Drosophila)	AF172319|SUFU|51684|suppressor of fused homolog (Drosophila)
hg19_v1_chr9_-_34620489_34620497	7.20153e-06	LHX3,4.p2	NM_007234|DCTN3|11258|dynactin 3 (p22)	NM_024348|DCTN3|11258|dynactin 3 (p22)
hg19_v1_chrX_+_114827818_114827919	4.23752e-06	LHX3,4.p2	NM_001136025|PLS3|5358|plastin 3	NM_001172335|PLS3|5358|plastin 3	AK298530|PLS3|5358|plastin 3	AK300575|PLS3|5358|plastin 3	BC039049|PLS3|5358|plastin 3
