hg19_v1_chr14_-_65409445_65409586	0.8735	SOX2.p2	BC022820|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	AK225871|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	BC005277|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	BC067221|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	BC016756|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	X68314|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	X53463|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	BC039850|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	BC046164|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	NM_002083|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)
hg19_v1_chr14_-_57960432_57960575	0.575217	SOX2.p2	HQ258368|C14orf105|55195|chromosome 14 open reading frame 105	BC117405|C14orf105|55195|chromosome 14 open reading frame 105	BC143565|C14orf105|55195|chromosome 14 open reading frame 105	BC143566|C14orf105|55195|chromosome 14 open reading frame 105	BC143567|C14orf105|55195|chromosome 14 open reading frame 105	BC143568|C14orf105|55195|chromosome 14 open reading frame 105	AK307238|C14orf105|55195|chromosome 14 open reading frame 105	AK223127|C14orf105|55195|chromosome 14 open reading frame 105	AK001512|C14orf105|55195|chromosome 14 open reading frame 105	BC028060|C14orf105|55195|chromosome 14 open reading frame 105	NM_018168|C14orf105|55195|chromosome 14 open reading frame 105
hg19_v1_chr8_-_6420454_6420929	0.572831	SOX2.p2	HQ258258|ANGPT2|285|angiopoietin 2	AF187858|ANGPT2|285|angiopoietin 2	AB009865|ANGPT2|285|angiopoietin 2	BC126200|ANGPT2|285|angiopoietin 2	BC126202|ANGPT2|285|angiopoietin 2	BC143902|ANGPT2|285|angiopoietin 2	AF218015|ANGPT2|285|angiopoietin 2	BC022490|ANGPT2|285|angiopoietin 2	AK075219|ANGPT2|285|angiopoietin 2	AK225698|ANGPT2|285|angiopoietin 2	AK290070|ANGPT2|285|angiopoietin 2	AK310171|ANGPT2|285|angiopoietin 2	AK312541|ANGPT2|285|angiopoietin 2	NM_001118887|ANGPT2|285|angiopoietin 2	NM_001118888|ANGPT2|285|angiopoietin 2	NM_001147|ANGPT2|285|angiopoietin 2	AJ289781|ANGPT2|285|angiopoietin 2
hg19_v1_chr2_-_161056762_161056829	0.514331	SOX2.p2	AK304203|ITGB6|3694|integrin, beta 6	AL831998|ITGB6|3694|integrin, beta 6	AK290300|ITGB6|3694|integrin, beta 6	AK313944|ITGB6|3694|integrin, beta 6
hg19_v1_chr7_-_41742666_41742705	0.501504	SOX2.p2	AF218018|INHBA|3624|inhibin, beta A	AK290584|INHBA|3624|inhibin, beta A	BC007858|INHBA|3624|inhibin, beta A	D49743|INHBA|3624|inhibin, beta A	NM_002192|INHBA|3624|inhibin, beta A
hg19_v1_chr6_+_12290528_12290658	0.491145	SOX2.p2	NM_001168319|EDN1|1906|endothelin 1	NM_001955|EDN1|1906|endothelin 1	S56805|EDN1|1906|endothelin 1	AK291838|EDN1|1906|endothelin 1	AK307089|EDN1|1906|endothelin 1	AK313914|EDN1|1906|endothelin 1	Y00749|EDN1|1906|endothelin 1	AK226096|EDN1|1906|endothelin 1	BC009720|EDN1|1906|endothelin 1
hg19_v1_chr2_+_210444364_210444424	0.442594	SOX2.p2	NM_002374|MAP2|4133|microtubule-associated protein 2	NM_031845|MAP2|4133|microtubule-associated protein 2	NM_031847|MAP2|4133|microtubule-associated protein 2	U01828|MAP2|4133|microtubule-associated protein 2	AK307603|MAP2|4133|microtubule-associated protein 2
hg19_v1_chr18_+_3594056_3594228	0.366052	SOX2.p2	AK093095|FLJ35776|649446|uncharacterized LOC649446	BC137437|FLJ35776|649446|uncharacterized LOC649446
hg19_v1_chr7_+_28452143_28452143	0.345384	SOX2.p2	L05515|CREB5|9586|cAMP responsive element binding protein 5	NM_182898|CREB5|9586|cAMP responsive element binding protein 5
hg19_v1_chr15_+_41136622_41136780	0.332199	SOX2.p2	NM_001032367|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	AK303899|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	BC004140|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	BT007425|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	DQ890747|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	DQ892293|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	DQ895493|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1
hg19_v1_chr17_+_57915192_57915421	0.292713	SOX2.p2	
hg19_v1_chr2_-_26205437_26205444	0.284548	SOX2.p2	NM_002254|KIF3C|3797|kinesin family member 3C
hg19_v1_chr2_-_26205327_26205367	0.284047	SOX2.p2	BC092406|KIF3C|3797|kinesin family member 3C	AK293738|KIF3C|3797|kinesin family member 3C	AK315324|KIF3C|3797|kinesin family member 3C	BC042486|KIF3C|3797|kinesin family member 3C	BX571741|KIF3C|3797|kinesin family member 3C
hg19_v1_chrX_-_139866582_139866722	0.272455	SOX2.p2	M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	NM_004065|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa
hg19_v1_chr1_-_183559463_183559654	0.267429	SOX2.p2	BT007439|NCF2|4688|neutrophil cytosolic factor 2	DQ893650|NCF2|4688|neutrophil cytosolic factor 2	DQ895812|NCF2|4688|neutrophil cytosolic factor 2	AF527950|NCF2|4688|neutrophil cytosolic factor 2	AK296672|NCF2|4688|neutrophil cytosolic factor 2	AK312666|NCF2|4688|neutrophil cytosolic factor 2	AK298713|NCF2|4688|neutrophil cytosolic factor 2
hg19_v1_chr1_+_86046434_86046668	0.266824	SOX2.p2	AK223385|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AK295430|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AK314571|CYR61|3491|cysteine-rich, angiogenic inducer, 61	NM_001554|CYR61|3491|cysteine-rich, angiogenic inducer, 61	BC016952|CYR61|3491|cysteine-rich, angiogenic inducer, 61	Y12084|CYR61|3491|cysteine-rich, angiogenic inducer, 61	Z98053|CYR61|3491|cysteine-rich, angiogenic inducer, 61	Y11307|CYR61|3491|cysteine-rich, angiogenic inducer, 61	BC009199|CYR61|3491|cysteine-rich, angiogenic inducer, 61	U62015|CYR61|3491|cysteine-rich, angiogenic inducer, 61	BC001271|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AF003594|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AF031385|CYR61|3491|cysteine-rich, angiogenic inducer, 61	DQ891262|CYR61|3491|cysteine-rich, angiogenic inducer, 61	DQ894449|CYR61|3491|cysteine-rich, angiogenic inducer, 61	CR536519|CYR61|3491|cysteine-rich, angiogenic inducer, 61
hg19_v1_chr15_+_41136178_41136522	0.257528	SOX2.p2	AK314825|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	AK300195|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	NM_003710|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	NM_181642|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	BC018702|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	AY358969|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	AB000095|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1	AY296715|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1
hg19_v1_chr12_-_49582800_49582865	0.256925	SOX2.p2	BC006468|TUBA1A|7846|tubulin, alpha 1a	BC050637|TUBA1A|7846|tubulin, alpha 1a	AF141347|TUBA1A|7846|tubulin, alpha 1a	AK057842|TUBA1A|7846|tubulin, alpha 1a	AK297775|TUBA1A|7846|tubulin, alpha 1a	BC057823|TUBA1A|7846|tubulin, alpha 1a	NM_006009|TUBA1A|7846|tubulin, alpha 1a	AK298838|TUBA1A|7846|tubulin, alpha 1a
hg19_v1_chr7_+_18535351_18535448	0.255595	SOX2.p2	BC150328|HDAC9|9734|histone deacetylase 9	AB018287|HDAC9|9734|histone deacetylase 9	AJ459808|HDAC9|9734|histone deacetylase 9	BC152405|HDAC9|9734|histone deacetylase 9	NM_001204145|HDAC9|9734|histone deacetylase 9	NM_001204146|HDAC9|9734|histone deacetylase 9	NM_014707|HDAC9|9734|histone deacetylase 9	NM_178423|HDAC9|9734|histone deacetylase 9	AK297404|HDAC9|9734|histone deacetylase 9	AK316109|HDAC9|9734|histone deacetylase 9	AY429540|HDAC9|9734|histone deacetylase 9
hg19_v1_chr2_+_210444154_210444187	0.251936	SOX2.p2	BC110423|MAP2|4133|microtubule-associated protein 2
hg19_v1_chrX_-_105282714_105282745	0.250995	SOX2.p2	AK310778|SERPINA7|6906|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7	NM_000354|SERPINA7|6906|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7
hg19_v1_chr17_+_43299277_43299443	0.247297	SOX2.p2	AY278319|FMNL1|752|formin-like 1	NM_005892|FMNL1|752|formin-like 1	BC111564|FMNL1|752|formin-like 1
hg19_v1_chr1_-_57431620_57431812	0.238118	SOX2.p2	HQ258464|C8B|732|complement component 8, beta polypeptide	BC130575|C8B|732|complement component 8, beta polypeptide	M16973|C8B|732|complement component 8, beta polypeptide	AK292740|C8B|732|complement component 8, beta polypeptide	AK313382|C8B|732|complement component 8, beta polypeptide	BC020701|C8B|732|complement component 8, beta polypeptide	NM_000066|C8B|732|complement component 8, beta polypeptide	AK298425|C8B|732|complement component 8, beta polypeptide	AK316209|C8B|732|complement component 8, beta polypeptide	AK298444|C8B|732|complement component 8, beta polypeptide
hg19_v1_chr7_+_73245192_73245350	0.232717	SOX2.p2	NM_001305|CLDN4|1364|claudin 4	AK026651|CLDN4|1364|claudin 4	AK124076|CLDN4|1364|claudin 4	BC000671|CLDN4|1364|claudin 4	AB000712|CLDN4|1364|claudin 4
hg19_v1_chr8_-_87755880_87755944	0.232119	SOX2.p2	BC150601|CNGB3|54714|cyclic nucleotide gated channel beta 3	AF272900|CNGB3|54714|cyclic nucleotide gated channel beta 3	NM_019098|CNGB3|54714|cyclic nucleotide gated channel beta 3
hg19_v1_chr12_-_10588543_10588615	0.221505	SOX2.p2	BC106069|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AK295525|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AF260134|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AF350017|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	NM_002260|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	X54869|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	Y13055|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AF461157|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	BC093644|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	BC112039|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2
hg19_v1_chr2_-_161056573_161056601	0.220054	SOX2.p2	AM393800|ITGB6|3694|integrin, beta 6	M35198|ITGB6|3694|integrin, beta 6	NM_000888|ITGB6|3694|integrin, beta 6	BC121178|ITGB6|3694|integrin, beta 6	BC143656|ITGB6|3694|integrin, beta 6
hg19_v1_chr2_+_149633173_149633186	0.219372	SOX2.p2	
hg19_v1_chr2_-_128421965_128422166	0.214074	SOX2.p2	AF527767|LIMS2|55679|LIM and senescent cell antigen-like domains 2	AK094954|LIMS2|55679|LIM and senescent cell antigen-like domains 2	AF527764|LIMS2|55679|LIM and senescent cell antigen-like domains 2	NM_017980|LIMS2|55679|LIM and senescent cell antigen-like domains 2
hg19_v1_chr12_-_122296619_122296768	0.210259	SOX2.p2	DQ892664|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	DQ896049|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	BC024287|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	BC014790|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	X72389|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	AK290826|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	NM_002150|HPD|3242|4-hydroxyphenylpyruvate dioxygenase
hg19_v1_chr8_-_29206321_29206321	0.208771	SOX2.p2	AL137704|DUSP4|1846|dual specificity phosphatase 4	NM_057158|DUSP4|1846|dual specificity phosphatase 4
hg19_v1_chrX_+_12993224_12993256	0.20761	SOX2.p2	BC107789|TMSB4X|7114|thymosin beta 4, X-linked	NM_021109|TMSB4X|7114|thymosin beta 4, X-linked	M17733|TMSB4X|7114|thymosin beta 4, X-linked	AK055976|TMSB4X|7114|thymosin beta 4, X-linked	AK057827|TMSB4X|7114|thymosin beta 4, X-linked	AK311747|TMSB4X|7114|thymosin beta 4, X-linked	BC016732|TMSB4X|7114|thymosin beta 4, X-linked	BC022857|TMSB4X|7114|thymosin beta 4, X-linked	BC062436|TMSB4X|7114|thymosin beta 4, X-linked	BC070248|TMSB4X|7114|thymosin beta 4, X-linked	BC070249|TMSB4X|7114|thymosin beta 4, X-linked	BC083509|TMSB4X|7114|thymosin beta 4, X-linked	BC092437|TMSB4X|7114|thymosin beta 4, X-linked	BC104666|TMSB4X|7114|thymosin beta 4, X-linked	BC061586|TMSB4X|7114|thymosin beta 4, X-linked	BC151215|TMSB4X|7114|thymosin beta 4, X-linked	BC139925|TMSB4X|7114|thymosin beta 4, X-linked	BC101790|TMSB4X|7114|thymosin beta 4, X-linked	BC101792|TMSB4X|7114|thymosin beta 4, X-linked	BC001631|TMSB4X|7114|thymosin beta 4, X-linked	BC064954|TMSB4X|7114|thymosin beta 4, X-linked	BC128103|TMSB4X|7114|thymosin beta 4, X-linked	BC141975|TMSB4X|7114|thymosin beta 4, X-linked	BC141976|TMSB4X|7114|thymosin beta 4, X-linked	BC128102|TMSB4X|7114|thymosin beta 4, X-linked
hg19_v1_chr10_-_30024594_30024934	0.206471	SOX2.p2	AF051850|SVIL|6840|supervillin	NM_003174|SVIL|6840|supervillin
hg19_v1_chr8_+_9911797_9911961	0.205438	SOX2.p2	AJ242973|MSRA|4482|methionine sulfoxide reductase A	BC054033|MSRA|4482|methionine sulfoxide reductase A	NM_001135670|MSRA|4482|methionine sulfoxide reductase A	NM_012331|MSRA|4482|methionine sulfoxide reductase A	AF086925|MSRA|4482|methionine sulfoxide reductase A	AF183420|MSRA|4482|methionine sulfoxide reductase A
hg19_v1_chr3_+_189507448_189507589	0.204183	SOX2.p2	AK304127|TP63|8626|tumor protein p63	NM_001114980|TP63|8626|tumor protein p63	NM_001114981|TP63|8626|tumor protein p63	NM_001114982|TP63|8626|tumor protein p63	GQ202689|TP63|8626|tumor protein p63	GQ202690|TP63|8626|tumor protein p63	AF091627|TP63|8626|tumor protein p63	AB010153|TP63|8626|tumor protein p63	AB042841|TP63|8626|tumor protein p63	AF075429|TP63|8626|tumor protein p63	AF075431|TP63|8626|tumor protein p63	AF075433|TP63|8626|tumor protein p63
hg19_v1_chr9_-_85882093_85882201	0.199377	SOX2.p2	GQ129452|FRMD3|257019|FERM domain containing 3	BC023560|FRMD3|257019|FERM domain containing 3	NM_001244962|FRMD3|257019|FERM domain containing 3
hg19_v1_chr7_+_28725597_28725769	0.189274	SOX2.p2	L05912|CREB5|9586|cAMP responsive element binding protein 5	AK300455|CREB5|9586|cAMP responsive element binding protein 5	BC059400|CREB5|9586|cAMP responsive element binding protein 5	NM_001011666|CREB5|9586|cAMP responsive element binding protein 5	AK316187|CREB5|9586|cAMP responsive element binding protein 5	AB209262|CREB5|9586|cAMP responsive element binding protein 5
hg19_v1_chr3_+_189349215_189349304	0.189237	SOX2.p2	BC039815|TP63|8626|tumor protein p63	NM_001114978|TP63|8626|tumor protein p63	NM_001114979|TP63|8626|tumor protein p63	NM_003722|TP63|8626|tumor protein p63	AB016072|TP63|8626|tumor protein p63	AB016073|TP63|8626|tumor protein p63	AF116771|TP63|8626|tumor protein p63	Y16961|TP63|8626|tumor protein p63	EU446669|TP63|8626|tumor protein p63
hg19_v1_chr1_-_213020947_213020990	0.188981	SOX2.p2	AY640234|C1orf227|149643|chromosome 1 open reading frame 227	BC035742|C1orf227|149643|chromosome 1 open reading frame 227	NM_001024601|C1orf227|149643|chromosome 1 open reading frame 227
hg19_v1_chr2_-_111230651_111230651	0.188428	SOX2.p2	BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 readthrough	NM_001205288|LIMS3L|100288695|LIM and senescent cell antigen-like domains 3-like	NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3
hg19_v1_chr4_+_115543522_115543522	0.187252	SOX2.p2	NM_003360|UGT8|7368|UDP glycosyltransferase 8	U30930|UGT8|7368|UDP glycosyltransferase 8
hg19_v1_chr9_+_127420690_127420719	0.184481	SOX2.p2	AB593023|MIR181A2HG|100379345|MIR181A2 host gene (non-protein coding)
hg19_v1_chr17_+_17398334_17398439	0.181565	SOX2.p2	
hg19_v1_chr6_-_46293215_46293392	0.180477	SOX2.p2	DQ891658|RCAN2|10231|regulator of calcineurin 2	DQ894845|RCAN2|10231|regulator of calcineurin 2	AK312392|RCAN2|10231|regulator of calcineurin 2
hg19_v1_chr17_-_39093671_39093835	0.176811	SOX2.p2	BC028356|KRT23|25984|keratin 23 (histone deacetylase inducible)	AK302109|KRT23|25984|keratin 23 (histone deacetylase inducible)	AL117538|KRT23|25984|keratin 23 (histone deacetylase inducible)	NM_015515|KRT23|25984|keratin 23 (histone deacetylase inducible)
hg19_v1_chr18_+_3449972_3450188	0.175859	SOX2.p2	NM_173209|TGIF1|7050|TGFB-induced factor homeobox 1	NM_173208|TGIF1|7050|TGFB-induced factor homeobox 1	NM_003244|TGIF1|7050|TGFB-induced factor homeobox 1	AK309471|TGIF1|7050|TGFB-induced factor homeobox 1	X89750|TGIF1|7050|TGFB-induced factor homeobox 1
hg19_v1_chr10_-_5060191_5060206	0.175218	SOX2.p2	BC063574|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK091194|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	NM_001354|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	NM_205845|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)
hg19_v1_chr17_-_39092714_39093086	0.175138	SOX2.p2	AK314604|KRT23|25984|keratin 23 (histone deacetylase inducible)	DQ891640|KRT23|25984|keratin 23 (histone deacetylase inducible)	DQ894829|KRT23|25984|keratin 23 (histone deacetylase inducible)	AK002047|KRT23|25984|keratin 23 (histone deacetylase inducible)	AF102848|KRT23|25984|keratin 23 (histone deacetylase inducible)	AK289449|KRT23|25984|keratin 23 (histone deacetylase inducible)	AK310880|KRT23|25984|keratin 23 (histone deacetylase inducible)
hg19_v1_chr12_+_58120029_58120108	0.17507	SOX2.p2	AK301303|LOC100130776|100130776|uncharacterized LOC100130776	BC069024|LOC100130776|100130776|uncharacterized LOC100130776	BC039697|LOC100130776|100130776|uncharacterized LOC100130776	BC019026|LOC100130776|100130776|uncharacterized LOC100130776
hg19_v1_chr1_-_6479880_6479980	0.174714	SOX2.p2	BC132698|HES2|54626|hairy and enhancer of split 2 (Drosophila)	BC136963|HES2|54626|hairy and enhancer of split 2 (Drosophila)	BC142687|HES2|54626|hairy and enhancer of split 2 (Drosophila)	AK091122|HES2|54626|hairy and enhancer of split 2 (Drosophila)	NM_019089|HES2|54626|hairy and enhancer of split 2 (Drosophila)
hg19_v1_chr15_+_71839540_71839620	0.17353	SOX2.p2	AK299056|THSD4|79875|thrombospondin, type I, domain containing 4	AK303870|THSD4|79875|thrombospondin, type I, domain containing 4	BX648716|THSD4|79875|thrombospondin, type I, domain containing 4	AY358143|THSD4|79875|thrombospondin, type I, domain containing 4
hg19_v1_chrX_-_76937157_76937201	0.170595	SOX2.p2	L33812|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked
hg19_v1_chr17_+_48638339_48638448	0.169165	SOX2.p2	BC110995|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	AF124351|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_018896|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198376|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198377|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198378|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198379|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198380|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198382|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198383|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198384|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198385|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198386|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198387|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198388|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198396|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198397|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit
hg19_v1_chr5_-_138718941_138719002	0.162377	SOX2.p2	AF058317|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	AJ269477|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	AK290789|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	AF170911|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	BC050261|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	AK300935|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	AF098277|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	AK298337|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	AJ250807|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	BC019225|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1
hg19_v1_chr1_+_177140530_177140632	0.162128	SOX2.p2	AB051534|FAM5B|57795|family with sequence similarity 5, member B	AB161694|FAM5B|57795|family with sequence similarity 5, member B	BC028036|FAM5B|57795|family with sequence similarity 5, member B	NM_021165|FAM5B|57795|family with sequence similarity 5, member B
hg19_v1_chr1_-_183559669_183559758	0.16206	SOX2.p2	BC001606|NCF2|4688|neutrophil cytosolic factor 2	NM_000433|NCF2|4688|neutrophil cytosolic factor 2	NM_001190789|NCF2|4688|neutrophil cytosolic factor 2	NM_001190794|NCF2|4688|neutrophil cytosolic factor 2
hg19_v1_chr16_-_4987056_4987152	0.161767	SOX2.p2	AF013717|PPL|5493|periplakin	BC114620|PPL|5493|periplakin	AF001691|PPL|5493|periplakin	NM_002705|PPL|5493|periplakin
hg19_v1_chr7_-_117513466_117513496	0.159868	SOX2.p2	AB051545|CTTNBP2|83992|cortactin binding protein 2	AK308081|CTTNBP2|83992|cortactin binding protein 2	AK091548|CTTNBP2|83992|cortactin binding protein 2
hg19_v1_chr8_+_87111132_87111157	0.159267	SOX2.p2	BC065207|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2	AK096027|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2	NM_152565|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2	AY079172|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2
hg19_v1_chr1_-_41487386_41487426	0.158253	SOX2.p2	BC022037|SLFNL1|200172|schlafen-like 1	AK292296|SLFNL1|200172|schlafen-like 1	BC037879|SLFNL1|200172|schlafen-like 1	NM_001168247|SLFNL1|200172|schlafen-like 1	AK097609|SLFNL1|200172|schlafen-like 1	NM_144990|SLFNL1|200172|schlafen-like 1
hg19_v1_chr2_+_177028804_177028804	0.157966	SOX2.p2	BC005124|HOXD3|3232|homeobox D3	NM_006898|HOXD3|3232|homeobox D3
hg19_v1_chr17_+_56065408_56065540	0.155074	SOX2.p2	
hg19_v1_chr15_+_59908908_59909017	0.154132	SOX2.p2	AK312852|GCNT3|9245|glucosaminyl (N-acetyl) transferase 3, mucin type
hg19_v1_chr6_+_36644236_36644266	0.152841	SOX2.p2	NM_001220777|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)	NM_078467|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)
hg19_v1_chr18_+_32073245_32073284	0.151283	SOX2.p2	NM_001198945|DTNA|1837|dystrobrevin, alpha	NM_001392|DTNA|1837|dystrobrevin, alpha	NM_032975|DTNA|1837|dystrobrevin, alpha	NM_032979|DTNA|1837|dystrobrevin, alpha	AK294746|DTNA|1837|dystrobrevin, alpha	U26742|DTNA|1837|dystrobrevin, alpha
hg19_v1_chr1_+_171283372_171283485	0.150645	SOX2.p2	BC002780|FMO4|2329|flavin containing monooxygenase 4	NM_002022|FMO4|2329|flavin containing monooxygenase 4	Z11737|FMO4|2329|flavin containing monooxygenase 4
hg19_v1_chr3_-_123339423_123339529	0.150412	SOX2.p2	NM_053031|MYLK|4638|myosin light chain kinase	NM_053032|MYLK|4638|myosin light chain kinase
hg19_v1_chr4_+_88896838_88896866	0.150046	SOX2.p2	BX648003|SPP1|6696|secreted phosphoprotein 1	J04765|SPP1|6696|secreted phosphoprotein 1	AK057738|SPP1|6696|secreted phosphoprotein 1	AK075463|SPP1|6696|secreted phosphoprotein 1	AK290090|SPP1|6696|secreted phosphoprotein 1	AK296035|SPP1|6696|secreted phosphoprotein 1	BC007016|SPP1|6696|secreted phosphoprotein 1	BC017387|SPP1|6696|secreted phosphoprotein 1	BC022844|SPP1|6696|secreted phosphoprotein 1	AK295491|SPP1|6696|secreted phosphoprotein 1
hg19_v1_chr21_+_35736322_35736371	0.148068	SOX2.p2	AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2
hg19_v1_chr6_-_91006580_91006644	0.148033	SOX2.p2	AK309526|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2	NM_001170794|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2
hg19_v1_chr17_+_48348766_48348766	0.147382	SOX2.p2	AY358204|TMEM92|162461|transmembrane protein 92	NM_001168215|TMEM92|162461|transmembrane protein 92
hg19_v1_chr4_+_88896899_88896928	0.14732	SOX2.p2	AY956318|SPP1|6696|secreted phosphoprotein 1	X13694|SPP1|6696|secreted phosphoprotein 1
hg19_v1_chr10_+_17271277_17271297	0.1466	SOX2.p2	X16478|VIM|7431|vimentin	AK222482|VIM|7431|vimentin	AF328728|VIM|7431|vimentin	BC000163|VIM|7431|vimentin	BC030573|VIM|7431|vimentin
hg19_v1_chrX_+_65384078_65384206	0.145925	SOX2.p2	NM_001130860|HEPH|9843|hephaestin	AK311043|HEPH|9843|hephaestin	AB014598|HEPH|9843|hephaestin	NM_014799|HEPH|9843|hephaestin	AY358990|HEPH|9843|hephaestin	AK307761|HEPH|9843|hephaestin
hg19_v1_chr1_+_177140062_177140095	0.144054	SOX2.p2	AK296524|FAM5B|57795|family with sequence similarity 5, member B
hg19_v1_chr4_-_40516567_40516601	0.142773	SOX2.p2	BX648404|RBM47|54502|RNA binding motif protein 47	AF262323|RBM47|54502|RNA binding motif protein 47
hg19_v1_chr6_-_76203256_76203497	0.142315	SOX2.p2	AK290232|FILIP1|27145|filamin A interacting protein 1	BC136443|FILIP1|27145|filamin A interacting protein 1	BC136444|FILIP1|27145|filamin A interacting protein 1	AL832009|FILIP1|27145|filamin A interacting protein 1	AK097021|FILIP1|27145|filamin A interacting protein 1	BX647178|FILIP1|27145|filamin A interacting protein 1	NM_015687|FILIP1|27145|filamin A interacting protein 1
hg19_v1_chr1_+_182569427_182569465	0.142067	SOX2.p2	
hg19_v1_chr10_+_17271302_17271316	0.141211	SOX2.p2	Z19554|VIM|7431|vimentin
hg19_v1_chr6_-_91006460_91006563	0.140829	SOX2.p2	AJ271878|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2	NM_021813|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2
hg19_v1_chr15_+_71433787_71433833	0.140682	SOX2.p2	NM_024817|THSD4|79875|thrombospondin, type I, domain containing 4	BC140868|THSD4|79875|thrombospondin, type I, domain containing 4
hg19_v1_chr22_-_42336222_42336222	0.13577	SOX2.p2	EU035297|CENPM|79019|centromere protein M	NM_001110215|CENPM|79019|centromere protein M
hg19_v1_chrX_-_64196268_64196430	0.135751	SOX2.p2	AK022918|ZC4H2|55906|zinc finger, C4H2 domain containing	AK123763|ZC4H2|55906|zinc finger, C4H2 domain containing	AK315485|ZC4H2|55906|zinc finger, C4H2 domain containing	AK222708|ZC4H2|55906|zinc finger, C4H2 domain containing	AK293570|ZC4H2|55906|zinc finger, C4H2 domain containing	AF270491|ZC4H2|55906|zinc finger, C4H2 domain containing	BC004411|ZC4H2|55906|zinc finger, C4H2 domain containing	AB032992|ZC4H2|55906|zinc finger, C4H2 domain containing	NM_001178033|ZC4H2|55906|zinc finger, C4H2 domain containing	NM_018684|ZC4H2|55906|zinc finger, C4H2 domain containing
hg19_v1_chr3_-_123339178_123339390	0.135466	SOX2.p2	BC113458|MYLK|4638|myosin light chain kinase	BC113456|MYLK|4638|myosin light chain kinase	BC100761|MYLK|4638|myosin light chain kinase	BC100762|MYLK|4638|myosin light chain kinase	BC100763|MYLK|4638|myosin light chain kinase	AF096773|MYLK|4638|myosin light chain kinase	AF096774|MYLK|4638|myosin light chain kinase	AF096775|MYLK|4638|myosin light chain kinase	AK314412|MYLK|4638|myosin light chain kinase	BC017811|MYLK|4638|myosin light chain kinase	BC107783|MYLK|4638|myosin light chain kinase	Y09530|MYLK|4638|myosin light chain kinase	BC064420|MYLK|4638|myosin light chain kinase	AK314443|MYLK|4638|myosin light chain kinase
hg19_v1_chr10_-_62332666_62332715	0.134642	SOX2.p2	AB209308|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	AK126851|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	NM_001204404|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v1_chr12_-_11175169_11175218	0.134609	SOX2.p2	NM_176888|TAS2R19|259294|taste receptor, type 2, member 19	BC101804|TAS2R19|259294|taste receptor, type 2, member 19	BC111998|TAS2R19|259294|taste receptor, type 2, member 19
hg19_v1_chr11_+_5710926_5711111	0.134152	SOX2.p2	AK308221|TRIM22|10346|tripartite motif containing 22	AK310098|TRIM22|10346|tripartite motif containing 22	BC022281|TRIM22|10346|tripartite motif containing 22	AK298715|TRIM22|10346|tripartite motif containing 22	BC035582|TRIM22|10346|tripartite motif containing 22	AK290434|TRIM22|10346|tripartite motif containing 22	X82200|TRIM22|10346|tripartite motif containing 22	AK308796|TRIM22|10346|tripartite motif containing 22	AK301192|TRIM22|10346|tripartite motif containing 22
hg19_v1_chr10_+_17271276_17271276	0.133737	SOX2.p2	AK056766|VIM|7431|vimentin	AK091813|VIM|7431|vimentin	AK097336|VIM|7431|vimentin	AK098444|VIM|7431|vimentin	AK222507|VIM|7431|vimentin	AK222602|VIM|7431|vimentin
hg19_v1_chrX_-_10645726_10645787	0.132065	SOX2.p2	AF041206|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001098624|MID1|4281|midline 1 (Opitz/BBB syndrome)	AK299061|MID1|4281|midline 1 (Opitz/BBB syndrome)
hg19_v1_chr5_+_71502700_71502827	0.131694	SOX2.p2	AK125194|MAP1B|4131|microtubule-associated protein 1B
hg19_v1_chr7_+_18548899_18548948	0.130838	SOX2.p2	NM_001204147|HDAC9|9734|histone deacetylase 9	NM_001204148|HDAC9|9734|histone deacetylase 9	AK304410|HDAC9|9734|histone deacetylase 9
hg19_v1_chr4_+_88896801_88896819	0.130218	SOX2.p2	NM_000582|SPP1|6696|secreted phosphoprotein 1	NM_001040058|SPP1|6696|secreted phosphoprotein 1	NM_001040060|SPP1|6696|secreted phosphoprotein 1	NM_001251829|SPP1|6696|secreted phosphoprotein 1	NM_001251830|SPP1|6696|secreted phosphoprotein 1	JF412667|SPP1|6696|secreted phosphoprotein 1	BC093033|SPP1|6696|secreted phosphoprotein 1
hg19_v1_chr5_+_140207562_140207676	0.129912	SOX2.p2	BC036674|PCDHA6|56142|protocadherin alpha 6	AF169694|PCDHA6|56142|protocadherin alpha 6	NM_018909|PCDHA6|56142|protocadherin alpha 6	NM_031848|PCDHA6|56142|protocadherin alpha 6	NM_031849|PCDHA6|56142|protocadherin alpha 6	AF152314|PCDHA6|56142|protocadherin alpha 6	AF152484|PCDHA6|56142|protocadherin alpha 6
hg19_v1_chr5_-_39424930_39424973	0.129193	SOX2.p2	BC003064|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	U53446|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg19_v1_chr14_-_24020766_24020874	0.128104	SOX2.p2	BC131533|ZFHX2|85446|zinc finger homeobox 2	AB028979|ZFHX2|85446|zinc finger homeobox 2	NM_033400|ZFHX2|85446|zinc finger homeobox 2
hg19_v1_chr9_-_95298251_95298373	0.127403	SOX2.p2	AB011792|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	AK303922|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	AK312820|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	AK296458|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	BX537976|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	NM_001197295|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	NM_001197296|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	NM_001393|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific
hg19_v1_chr13_+_96085852_96085857	0.127348	SOX2.p2	NM_001160100|CLDN10|9071|claudin 10	NM_182848|CLDN10|9071|claudin 10	AK055855|CLDN10|9071|claudin 10
hg19_v1_chr9_+_4490193_4490681	0.126209	SOX2.p2	NM_004170|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	BC033040|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	AB008536|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	U08989|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	AK313013|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	U06469|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	U03506|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	DQ892425|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	DQ895639|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
hg19_v1_chr12_+_93963597_93963597	0.124794	SOX2.p2	NM_003877|SOCS2|8835|suppressor of cytokine signaling 2
hg19_v1_chr10_-_61900659_61900773	0.12344	SOX2.p2	AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v1_chr18_+_3451589_3451674	0.122435	SOX2.p2	NM_170695|TGIF1|7050|TGFB-induced factor homeobox 1	NM_173210|TGIF1|7050|TGFB-induced factor homeobox 1	BC031268|TGIF1|7050|TGFB-induced factor homeobox 1
hg19_v1_chr11_-_125550674_125550792	0.122333	SOX2.p2	AB451476|ACRV1|56|acrosomal vesicle protein 1	M82967|ACRV1|56|acrosomal vesicle protein 1	M82968|ACRV1|56|acrosomal vesicle protein 1	AK223335|ACRV1|56|acrosomal vesicle protein 1	BC014588|ACRV1|56|acrosomal vesicle protein 1	NM_001612|ACRV1|56|acrosomal vesicle protein 1	NM_020069|ACRV1|56|acrosomal vesicle protein 1	NM_020107|ACRV1|56|acrosomal vesicle protein 1	NM_020108|ACRV1|56|acrosomal vesicle protein 1
hg19_v1_chr14_-_73493744_73493919	0.121602	SOX2.p2	AB046809|ZFYVE1|53349|zinc finger, FYVE domain containing 1	AJ310569|ZFYVE1|53349|zinc finger, FYVE domain containing 1	AK027399|ZFYVE1|53349|zinc finger, FYVE domain containing 1	BC014902|ZFYVE1|53349|zinc finger, FYVE domain containing 1	BC053520|ZFYVE1|53349|zinc finger, FYVE domain containing 1	NM_021260|ZFYVE1|53349|zinc finger, FYVE domain containing 1
hg19_v1_chr10_+_114043413_114043492	0.121501	SOX2.p2	BC113497|TECTB|6975|tectorin beta	BC113499|TECTB|6975|tectorin beta	AF312827|TECTB|6975|tectorin beta	HQ258194|TECTB|6975|tectorin beta	NM_058222|TECTB|6975|tectorin beta
hg19_v1_chr12_-_371994_372038	0.120633	SOX2.p2	AK313511|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	AF462445|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	AK295904|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	AK296127|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	AK296209|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	BC020867|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	BC022392|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	NM_001190997|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	NM_001243392|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	NM_016615|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13
hg19_v1_chr10_+_22725990_22726008	0.120002	SOX2.p2	AK295718|LOC100289455|100289455|uncharacterized LOC100289455
hg19_v1_chr9_-_99064385_99064433	0.119564	SOX2.p2	BT019371|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	CR541894|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	DQ891812|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	DQ894995|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	BC034281|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	NM_000197|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	U05659|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3
hg19_v1_chr1_+_9711781_9711828	0.118792	SOX2.p2	AK314191|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide	NM_005026|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide	U86453|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide	Y10055|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide	BC030263|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide
hg19_v1_chr6_-_56716412_56716493	0.118459	SOX2.p2	AK294830|DST|667|dystonin
hg19_v1_chr12_-_11002051_11002074	0.117925	SOX2.p2	S79048|PRR4|11272|proline rich 4 (lacrimal)	AF530472|PRR4|11272|proline rich 4 (lacrimal)	BX537839|PRR4|11272|proline rich 4 (lacrimal)	AK304321|PRR4|11272|proline rich 4 (lacrimal)	AK292991|PRR4|11272|proline rich 4 (lacrimal)	AK311715|PRR4|11272|proline rich 4 (lacrimal)	BC058035|PRR4|11272|proline rich 4 (lacrimal)	AK292934|PRR4|11272|proline rich 4 (lacrimal)	NM_001098538|PRR4|11272|proline rich 4 (lacrimal)	NM_007244|PRR4|11272|proline rich 4 (lacrimal)
hg19_v1_chr6_+_17282931_17283077	0.11588	SOX2.p2	AK055391|RBM24|221662|RNA binding motif protein 24	NM_153020|RBM24|221662|RNA binding motif protein 24	BC104808|RBM24|221662|RNA binding motif protein 24	BC104810|RBM24|221662|RNA binding motif protein 24	BC040928|RBM24|221662|RNA binding motif protein 24
hg19_v1_chr12_-_67072881_67072924	0.115035	SOX2.p2	AK095519|GRIP1|23426|glutamate receptor interacting protein 1	NM_001178074|GRIP1|23426|glutamate receptor interacting protein 1	NM_021150|GRIP1|23426|glutamate receptor interacting protein 1
hg19_v1_chr12_+_53491448_53491506	0.113186	SOX2.p2	M62402|IGFBP6|3489|insulin-like growth factor binding protein 6	AK313158|IGFBP6|3489|insulin-like growth factor binding protein 6	BC003507|IGFBP6|3489|insulin-like growth factor binding protein 6	BC011708|IGFBP6|3489|insulin-like growth factor binding protein 6	BC005007|IGFBP6|3489|insulin-like growth factor binding protein 6	DQ892995|IGFBP6|3489|insulin-like growth factor binding protein 6	DQ896243|IGFBP6|3489|insulin-like growth factor binding protein 6	CR541791|IGFBP6|3489|insulin-like growth factor binding protein 6	M69054|IGFBP6|3489|insulin-like growth factor binding protein 6
hg19_v1_chr6_-_56716713_56716715	0.113002	SOX2.p2	AK299898|DST|667|dystonin
hg19_v1_chr5_-_138719018_138719038	0.112834	SOX2.p2	NM_005847|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1	NM_152685|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1
hg19_v1_chr17_-_49124128_49124328	0.112598	SOX2.p2	BC007524|SPAG9|9043|sperm associated antigen 9	BC059946|SPAG9|9043|sperm associated antigen 9	AK299553|SPAG9|9043|sperm associated antigen 9	AK307793|SPAG9|9043|sperm associated antigen 9	AK295098|SPAG9|9043|sperm associated antigen 9	AK309214|SPAG9|9043|sperm associated antigen 9	AK024068|SPAG9|9043|sperm associated antigen 9	NM_001251971|SPAG9|9043|sperm associated antigen 9
hg19_v1_chr6_+_123100860_123100939	0.1116	SOX2.p2	AK311867|FABP7|2173|fatty acid binding protein 7, brain	AK289836|FABP7|2173|fatty acid binding protein 7, brain	AJ002962|FABP7|2173|fatty acid binding protein 7, brain	U51338|FABP7|2173|fatty acid binding protein 7, brain	D50373|FABP7|2173|fatty acid binding protein 7, brain	D88648|FABP7|2173|fatty acid binding protein 7, brain	AL512688|FABP7|2173|fatty acid binding protein 7, brain	U81235|FABP7|2173|fatty acid binding protein 7, brain	CR457057|FABP7|2173|fatty acid binding protein 7, brain	DQ891437|FABP7|2173|fatty acid binding protein 7, brain	DQ894613|FABP7|2173|fatty acid binding protein 7, brain	EU176601|FABP7|2173|fatty acid binding protein 7, brain
hg19_v1_chr7_+_123249076_123249111	0.111018	SOX2.p2	AF428257|ASB15|142685|ankyrin repeat and SOCS box containing 15	BC100874|ASB15|142685|ankyrin repeat and SOCS box containing 15	BC100875|ASB15|142685|ankyrin repeat and SOCS box containing 15	BC100876|ASB15|142685|ankyrin repeat and SOCS box containing 15	BC100877|ASB15|142685|ankyrin repeat and SOCS box containing 15	NM_080928|ASB15|142685|ankyrin repeat and SOCS box containing 15
hg19_v1_chr15_+_99191671_99192272	0.110932	SOX2.p2	AB425196|IGF1R|3480|insulin-like growth factor 1 receptor
hg19_v1_chr16_+_89989686_89989830	0.110769	SOX2.p2	NM_006086|TUBB3|10381|tubulin, beta 3 class III	AK314616|TUBB3|10381|tubulin, beta 3 class III	AK058140|TUBB3|10381|tubulin, beta 3 class III	AK223039|TUBB3|10381|tubulin, beta 3 class III	AK307201|TUBB3|10381|tubulin, beta 3 class III	BC000748|TUBB3|10381|tubulin, beta 3 class III	BC003021|TUBB3|10381|tubulin, beta 3 class III	BC064975|TUBB3|10381|tubulin, beta 3 class III	AF427491|TUBB3|10381|tubulin, beta 3 class III	U47634|TUBB3|10381|tubulin, beta 3 class III	S62643|TUBB3|10381|tubulin, beta 3 class III
hg19_v1_chrX_+_48367346_48367476	0.110666	SOX2.p2	NM_022825|PORCN|64840|porcupine homolog (Drosophila)	NM_203473|PORCN|64840|porcupine homolog (Drosophila)	AK293347|PORCN|64840|porcupine homolog (Drosophila)	AK056340|PORCN|64840|porcupine homolog (Drosophila)	BC019080|PORCN|64840|porcupine homolog (Drosophila)	AK057727|PORCN|64840|porcupine homolog (Drosophila)	AK314745|PORCN|64840|porcupine homolog (Drosophila)
hg19_v1_chr9_+_103235489_103235519	0.110603	SOX2.p2	NM_003692|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v1_chr11_-_10590078_10590364	0.109482	SOX2.p2	DQ892040|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	DQ895232|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AK300885|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	BC026231|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AF118108|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AF127670|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AY358925|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AK075443|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AK312462|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	NM_006691|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1
hg19_v1_chr11_-_69519105_69519105	0.109379	SOX2.p2	AF110400|FGF19|9965|fibroblast growth factor 19	AY358302|FGF19|9965|fibroblast growth factor 19	NM_005117|FGF19|9965|fibroblast growth factor 19
hg19_v1_chr3_-_112359962_112359992	0.109237	SOX2.p2	AY548106|CCDC80|151887|coiled-coil domain containing 80	AY548107|CCDC80|151887|coiled-coil domain containing 80	BC110842|CCDC80|151887|coiled-coil domain containing 80	AY526612|CCDC80|151887|coiled-coil domain containing 80	NM_199511|CCDC80|151887|coiled-coil domain containing 80	NM_199512|CCDC80|151887|coiled-coil domain containing 80	AK304561|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr17_-_63009302_63009310	0.109221	SOX2.p2	AK026902|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13
hg19_v1_chr2_-_158182154_158182415	0.108806	SOX2.p2	HQ447390|ERMN|57471|ermin, ERM-like protein	AB033015|ERMN|57471|ermin, ERM-like protein	DQ334271|ERMN|57471|ermin, ERM-like protein	BC026345|ERMN|57471|ermin, ERM-like protein	AK295844|ERMN|57471|ermin, ERM-like protein	NM_020711|ERMN|57471|ermin, ERM-like protein
hg19_v1_chr6_-_29527701_29527701	0.108597	SOX2.p2	AF123050|UBD|10537|ubiquitin D	NM_006398|UBD|10537|ubiquitin D
hg19_v1_chr9_+_2622134_2622188	0.107931	SOX2.p2	AK092381|VLDLR|7436|very low density lipoprotein receptor	D16494|VLDLR|7436|very low density lipoprotein receptor
hg19_v1_chrX_+_135229536_135229731	0.107099	SOX2.p2	NM_001159702|FHL1|2273|four and a half LIM domains 1	NM_001159703|FHL1|2273|four and a half LIM domains 1	NM_001449|FHL1|2273|four and a half LIM domains 1	BC010998|FHL1|2273|four and a half LIM domains 1	AK297124|FHL1|2273|four and a half LIM domains 1	AK091702|FHL1|2273|four and a half LIM domains 1	AK300966|FHL1|2273|four and a half LIM domains 1	AK094024|FHL1|2273|four and a half LIM domains 1
hg19_v1_chr7_-_7575449_7575459	0.107051	SOX2.p2	BC136892|COL28A1|340267|collagen, type XXVIII, alpha 1	BC144431|COL28A1|340267|collagen, type XXVIII, alpha 1	AJ890451|COL28A1|340267|collagen, type XXVIII, alpha 1	NM_001037763|COL28A1|340267|collagen, type XXVIII, alpha 1
hg19_v1_chr19_+_18496966_18496999	0.10701	SOX2.p2	AB000584|GDF15|9518|growth differentiation factor 15	AK225431|GDF15|9518|growth differentiation factor 15	AK291530|GDF15|9518|growth differentiation factor 15	NM_004864|GDF15|9518|growth differentiation factor 15	BC008962|GDF15|9518|growth differentiation factor 15	U88323|GDF15|9518|growth differentiation factor 15	BC000529|GDF15|9518|growth differentiation factor 15	AF019770|GDF15|9518|growth differentiation factor 15	U51731|GDF15|9518|growth differentiation factor 15	BT019465|GDF15|9518|growth differentiation factor 15
hg19_v1_chr1_-_155177685_155177771	0.106267	SOX2.p2	AK223278|THBS3|7059|thrombospondin 3	L38969|THBS3|7059|thrombospondin 3	AK298803|THBS3|7059|thrombospondin 3	BC113846|THBS3|7059|thrombospondin 3	BC113847|THBS3|7059|thrombospondin 3	AK298592|THBS3|7059|thrombospondin 3	AK314337|THBS3|7059|thrombospondin 3	NM_001252607|THBS3|7059|thrombospondin 3	NM_001252608|THBS3|7059|thrombospondin 3	NM_007112|THBS3|7059|thrombospondin 3
hg19_v1_chr17_-_18950238_18950335	0.105727	SOX2.p2	BT019981|GRAP|10750|GRB2-related adaptor protein	CR541941|GRAP|10750|GRB2-related adaptor protein	CR541966|GRAP|10750|GRB2-related adaptor protein	BC035856|GRAP|10750|GRB2-related adaptor protein	U52518|GRAP|10750|GRB2-related adaptor protein	BC063035|GRAP|10750|GRB2-related adaptor protein	NM_006613|GRAP|10750|GRB2-related adaptor protein
hg19_v1_chr9_+_2622099_2622126	0.105484	SOX2.p2	S73849|VLDLR|7436|very low density lipoprotein receptor	D16493|VLDLR|7436|very low density lipoprotein receptor	BC142653|VLDLR|7436|very low density lipoprotein receptor
hg19_v1_chr12_+_120933911_120933915	0.105181	SOX2.p2	AK311790|DYNLL1|8655|dynein, light chain, LC8-type 1
hg19_v1_chr10_+_17270469_17270604	0.103992	SOX2.p2	BC066956|VIM|7431|vimentin
hg19_v1_chr10_-_92681025_92681031	0.10199	SOX2.p2	X83703|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	NM_014391|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)
hg19_v1_chr9_+_103235634_103235825	0.101625	SOX2.p2	BC035056|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1	DQ891732|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1	DQ894909|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v1_chr3_-_149086884_149086954	0.101088	SOX2.p2	X75684|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr18_+_32073343_32073384	0.100708	SOX2.p2	AJ009668|DTNA|1837|dystrobrevin, alpha
hg19_v1_chr18_+_66465316_66465369	0.100622	SOX2.p2	NM_024781|CCDC102B|79839|coiled-coil domain containing 102B	CR749520|CCDC102B|79839|coiled-coil domain containing 102B
hg19_v1_chr8_-_38325524_38325691	0.0992845	SOX2.p2	X51803|FGFR1|2260|fibroblast growth factor receptor 1	X57119|FGFR1|2260|fibroblast growth factor receptor 1	X57120|FGFR1|2260|fibroblast growth factor receptor 1	X57121|FGFR1|2260|fibroblast growth factor receptor 1	X57122|FGFR1|2260|fibroblast growth factor receptor 1	M37722|FGFR1|2260|fibroblast growth factor receptor 1	M34185|FGFR1|2260|fibroblast growth factor receptor 1
hg19_v1_chr3_-_112359863_112359904	0.0987623	SOX2.p2	BX647117|CCDC80|151887|coiled-coil domain containing 80	BC116178|CCDC80|151887|coiled-coil domain containing 80	BC116179|CCDC80|151887|coiled-coil domain containing 80	AY333429|CCDC80|151887|coiled-coil domain containing 80	AF506819|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr11_+_10830752_10830843	0.0987169	SOX2.p2	
hg19_v1_chr5_+_149980627_149980657	0.0980986	SOX2.p2	AL831818|SYNPO|11346|synaptopodin	NM_001166208|SYNPO|11346|synaptopodin
hg19_v1_chr19_-_39303520_39303586	0.0976462	SOX2.p2	AK296194|LGALS4|3960|lectin, galactoside-binding, soluble, 4	BT007032|LGALS4|3960|lectin, galactoside-binding, soluble, 4	CR536544|LGALS4|3960|lectin, galactoside-binding, soluble, 4	AF014838|LGALS4|3960|lectin, galactoside-binding, soluble, 4	U82953|LGALS4|3960|lectin, galactoside-binding, soluble, 4	BC034750|LGALS4|3960|lectin, galactoside-binding, soluble, 4	BC003661|LGALS4|3960|lectin, galactoside-binding, soluble, 4	BC005146|LGALS4|3960|lectin, galactoside-binding, soluble, 4	AB006781|LGALS4|3960|lectin, galactoside-binding, soluble, 4	AK290269|LGALS4|3960|lectin, galactoside-binding, soluble, 4	AK296604|LGALS4|3960|lectin, galactoside-binding, soluble, 4
hg19_v1_chr7_-_100061893_100061893	0.0968869	SOX2.p2	BC031966|C7orf61|402573|chromosome 7 open reading frame 61	NM_001004323|C7orf61|402573|chromosome 7 open reading frame 61
hg19_v1_chr18_+_3447607_3447627	0.0967078	SOX2.p2	NM_173207|TGIF1|7050|TGFB-induced factor homeobox 1	AK291112|TGIF1|7050|TGFB-induced factor homeobox 1
hg19_v1_chr2_+_206547131_206547226	0.0964448	SOX2.p2	AK130198|NRP2|8828|neuropilin 2	AL833606|NRP2|8828|neuropilin 2	NM_003872|NRP2|8828|neuropilin 2	NM_018534|NRP2|8828|neuropilin 2	NM_201264|NRP2|8828|neuropilin 2	NM_201266|NRP2|8828|neuropilin 2	NM_201267|NRP2|8828|neuropilin 2	NM_201279|NRP2|8828|neuropilin 2	BX537423|NRP2|8828|neuropilin 2
hg19_v1_chr12_-_62997207_62997213	0.0962953	SOX2.p2	BC136288|C12orf61|283416|chromosome 12 open reading frame 61	AK098456|C12orf61|283416|chromosome 12 open reading frame 61	NM_175895|C12orf61|283416|chromosome 12 open reading frame 61
hg19_v1_chrX_-_153599581_153599650	0.0959303	SOX2.p2	AB191259|FLNA|2316|filamin A, alpha	AB371575|FLNA|2316|filamin A, alpha	AB371577|FLNA|2316|filamin A, alpha	AB371578|FLNA|2316|filamin A, alpha	AB371579|FLNA|2316|filamin A, alpha	AB191260|FLNA|2316|filamin A, alpha	AB371574|FLNA|2316|filamin A, alpha	AB371576|FLNA|2316|filamin A, alpha	AK090427|FLNA|2316|filamin A, alpha
hg19_v1_chr14_+_77228940_77229164	0.0958455	SOX2.p2	BC051896|VASH1|22846|vasohibin 1	AK291377|VASH1|22846|vasohibin 1
hg19_v1_chr12_+_120933832_120933903	0.0954004	SOX2.p2	NM_001037495|DYNLL1|8655|dynein, light chain, LC8-type 1	NM_003746|DYNLL1|8655|dynein, light chain, LC8-type 1
hg19_v1_chr17_+_27920479_27920526	0.0953395	SOX2.p2	NM_152345|ANKRD13B|124930|ankyrin repeat domain 13B
hg19_v1_chr1_+_151032880_151032893	0.0939719	SOX2.p2	AK057755|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC007079|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC008445|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg19_v1_chr7_-_27142301_27142393	0.0938054	SOX2.p2	AK096742|HOXA2|3199|homeobox A2	NM_006735|HOXA2|3199|homeobox A2
hg19_v1_chr9_-_130712866_130712997	0.0936539	SOX2.p2	BC137087|FAM102A|399665|family with sequence similarity 102, member A	BC137088|FAM102A|399665|family with sequence similarity 102, member A	BC047949|FAM102A|399665|family with sequence similarity 102, member A	NM_203305|FAM102A|399665|family with sequence similarity 102, member A	BC142952|FAM102A|399665|family with sequence similarity 102, member A
hg19_v1_chr20_+_20348744_20348764	0.0934025	SOX2.p2	M93119|INSM1|3642|insulinoma-associated 1	NM_002196|INSM1|3642|insulinoma-associated 1
hg19_v1_chr5_+_147648374_147648422	0.0929995	SOX2.p2	EF108324|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	EF426754|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	BC128163|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	BC128164|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	NM_001040129|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)
hg19_v1_chr10_-_76868853_76868975	0.0929749	SOX2.p2	BC009778|DUSP13|51207|dual specificity phosphatase 13	AY040091|DUSP13|51207|dual specificity phosphatase 13	AK057012|DUSP13|51207|dual specificity phosphatase 13	AY674051|DUSP13|51207|dual specificity phosphatase 13	AK291897|DUSP13|51207|dual specificity phosphatase 13	AK300679|DUSP13|51207|dual specificity phosphatase 13	AK127886|DUSP13|51207|dual specificity phosphatase 13	NM_001007271|DUSP13|51207|dual specificity phosphatase 13	NM_001007272|DUSP13|51207|dual specificity phosphatase 13	NM_001007273|DUSP13|51207|dual specificity phosphatase 13	AK291891|DUSP13|51207|dual specificity phosphatase 13
hg19_v1_chr19_+_13134782_13134827	0.0926141	SOX2.p2	AK297261|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)	U18759|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)
hg19_v1_chr7_+_18548963_18548975	0.0921059	SOX2.p2	AK304343|HDAC9|9734|histone deacetylase 9
hg19_v1_chr8_-_38326115_38326188	0.0919739	SOX2.p2	BC018128|FGFR1|2260|fibroblast growth factor receptor 1	M60485|FGFR1|2260|fibroblast growth factor receptor 1	X66945|FGFR1|2260|fibroblast growth factor receptor 1	AB208919|FGFR1|2260|fibroblast growth factor receptor 1	BC015035|FGFR1|2260|fibroblast growth factor receptor 1	AK222718|FGFR1|2260|fibroblast growth factor receptor 1	AK223126|FGFR1|2260|fibroblast growth factor receptor 1
hg19_v1_chr6_-_128222175_128222225	0.0918266	SOX2.p2	AK292046|THEMIS|387357|thymocyte selection associated	AK097903|THEMIS|387357|thymocyte selection associated	BC144034|THEMIS|387357|thymocyte selection associated	BC130516|THEMIS|387357|thymocyte selection associated	NM_001010923|THEMIS|387357|thymocyte selection associated	NM_001164685|THEMIS|387357|thymocyte selection associated
hg19_v1_chr2_+_177016112_177016314	0.0918242	SOX2.p2	NM_014621|HOXD4|3233|homeobox D4	X04706|HOXD4|3233|homeobox D4	AK313885|HOXD4|3233|homeobox D4	BC016763|HOXD4|3233|homeobox D4	BC074797|HOXD4|3233|homeobox D4
hg19_v1_chr15_-_42186274_42186274	0.0918008	SOX2.p2	AF233523|SPTBN5|51332|spectrin, beta, non-erythrocytic 5	NM_016642|SPTBN5|51332|spectrin, beta, non-erythrocytic 5
hg19_v1_chr1_+_151032906_151032912	0.091693	SOX2.p2	BC019253|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg19_v1_chrX_+_99899162_99899303	0.0915638	SOX2.p2	NM_014467|SRPX2|27286|sushi-repeat containing protein, X-linked 2	AK075462|SRPX2|27286|sushi-repeat containing protein, X-linked 2	AF060567|SRPX2|27286|sushi-repeat containing protein, X-linked 2	AF393649|SRPX2|27286|sushi-repeat containing protein, X-linked 2
hg19_v1_chr1_-_159895279_159895296	0.091242	SOX2.p2	BC002616|TAGLN2|8407|transgelin 2	D21261|TAGLN2|8407|transgelin 2	GU727636|TAGLN2|8407|transgelin 2	NM_003564|TAGLN2|8407|transgelin 2	AK291562|TAGLN2|8407|transgelin 2	AK298654|TAGLN2|8407|transgelin 2
hg19_v1_chr17_-_41910439_41910814	0.0910669	SOX2.p2	AK309045|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	AK299535|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	AK313045|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	AK311368|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	BC035833|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	BC025743|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	BC047017|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	NM_001932|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)
hg19_v1_chr11_-_7041465_7041585	0.0903202	SOX2.p2	BC136772|ZNF214|7761|zinc finger protein 214	BC144405|ZNF214|7761|zinc finger protein 214	AF056617|ZNF214|7761|zinc finger protein 214	AK313462|ZNF214|7761|zinc finger protein 214	NM_013249|ZNF214|7761|zinc finger protein 214
hg19_v1_chr14_+_69658482_69658551	0.0899266	SOX2.p2	AK292563|EXD2|55218|exonuclease 3'-5' domain containing 2	NM_001193362|EXD2|55218|exonuclease 3'-5' domain containing 2	NM_001193363|EXD2|55218|exonuclease 3'-5' domain containing 2	AK295601|EXD2|55218|exonuclease 3'-5' domain containing 2	BX161412|EXD2|55218|exonuclease 3'-5' domain containing 2
hg19_v1_chr7_-_107880492_107880613	0.0892211	SOX2.p2	AJ001057|NRCAM|4897|neuronal cell adhesion molecule	NM_001037132|NRCAM|4897|neuronal cell adhesion molecule
hg19_v1_chr6_-_29527477_29527510	0.089155	SOX2.p2	DQ894624|UBD|10537|ubiquitin D	Y12653|UBD|10537|ubiquitin D	BC012472|UBD|10537|ubiquitin D	AK311914|UBD|10537|ubiquitin D
hg19_v1_chr10_-_5045967_5046093	0.0890795	SOX2.p2	M33376|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AB021654|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AB031084|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	BT006653|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	DQ890680|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	DQ893862|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	S68330|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	BC007024|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	U05598|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK296419|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK308385|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK296686|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	NM_001135241|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK290304|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AB209017|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)
hg19_v1_chr10_-_92680784_92680848	0.0890259	SOX2.p2	DQ892852|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	DQ896099|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	AY903446|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	BC005191|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	AK290960|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	BC018667|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)
hg19_v1_chr9_-_4299574_4299593	0.0886375	SOX2.p2	DQ438882|GLIS3|169792|GLIS family zinc finger 3	DQ438887|GLIS3|169792|GLIS family zinc finger 3	DQ438892|GLIS3|169792|GLIS family zinc finger 3	DQ438899|GLIS3|169792|GLIS family zinc finger 3	DQ438902|GLIS3|169792|GLIS family zinc finger 3
hg19_v1_chr1_+_151032866_151032873	0.0885105	SOX2.p2	BC009624|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg19_v1_chr1_-_159895258_159895272	0.0884799	SOX2.p2	BC009357|TAGLN2|8407|transgelin 2
hg19_v1_chr6_-_24583454_24583454	0.088201	SOX2.p2	AK310289|KIAA0319|9856|KIAA0319	NM_001252328|KIAA0319|9856|KIAA0319
hg19_v1_chr4_-_170077807_170077832	0.0879306	SOX2.p2	BC041023|SH3RF1|57630|SH3 domain containing ring finger 1
hg19_v1_chr19_+_12780516_12780603	0.0878476	SOX2.p2	NM_032332|WDR83|84292|WD repeat domain 83	AK223195|WDR83|84292|WD repeat domain 83	BC005870|WDR83|84292|WD repeat domain 83
hg19_v1_chr10_-_62149487_62149633	0.0873445	SOX2.p2	U13616|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	NM_020987|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v1_chr5_+_140613937_140613963	0.0863743	SOX2.p2	AK095496|PCDHB18|54660|protocadherin beta 18 pseudogene
hg19_v1_chr8_-_38325241_38325362	0.086318	SOX2.p2	AK291754|FGFR1|2260|fibroblast growth factor receptor 1	AK309947|FGFR1|2260|fibroblast growth factor receptor 1	AK292470|FGFR1|2260|fibroblast growth factor receptor 1	NM_001174065|FGFR1|2260|fibroblast growth factor receptor 1	NM_001174066|FGFR1|2260|fibroblast growth factor receptor 1	NM_001174067|FGFR1|2260|fibroblast growth factor receptor 1
hg19_v1_chr12_-_71148383_71148538	0.0862028	SOX2.p2	BC092469|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	NM_130846|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	U77916|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BX571751|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	AK304457|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	AK304672|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	NM_001207016|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg19_v1_chr12_+_120933916_120933953	0.0858793	SOX2.p2	BC100289|DYNLL1|8655|dynein, light chain, LC8-type 1	U32944|DYNLL1|8655|dynein, light chain, LC8-type 1	BC104244|DYNLL1|8655|dynein, light chain, LC8-type 1	BC104245|DYNLL1|8655|dynein, light chain, LC8-type 1
hg19_v1_chr11_-_126225445_126225481	0.0853933	SOX2.p2	AK096370|FLJ39051|399972|uncharacterized LOC399972
hg19_v1_chr15_+_59908724_59908787	0.0853672	SOX2.p2	AF102542|GCNT3|9245|glucosaminyl (N-acetyl) transferase 3, mucin type
hg19_v1_chr20_-_43024303_43024345	0.0853459	SOX2.p2	
hg19_v1_chr9_+_103204187_103204220	0.085148	SOX2.p2	NM_001198812|C9orf30-TMEFF1|100526694|C9orf30-TMEFF1 readthrough	AY598327|C9orf30|91283|chromosome 9 open reading frame 30
hg19_v1_chr4_-_139163222_139163506	0.0844467	SOX2.p2	AJ277882|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AB040875|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	BC012087|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AK314855|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AF252872|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AB026891|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AF200708|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AK290359|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	NM_014331|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11
hg19_v1_chr2_+_153191830_153192116	0.0843357	SOX2.p2	BC113878|FMNL2|114793|formin-like 2	BC114438|FMNL2|114793|formin-like 2	AB067489|FMNL2|114793|formin-like 2	BC167159|FMNL2|114793|formin-like 2
hg19_v1_chr5_-_39425297_39425338	0.0839551	SOX2.p2	NM_001244871|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	NM_001343|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg19_v1_chr6_+_121756744_121756906	0.0838216	SOX2.p2	NM_000165|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK312324|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK297764|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK223289|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK294670|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK309377|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK295460|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK297761|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK309490|GJA1|2697|gap junction protein, alpha 1, 43kDa	M65188|GJA1|2697|gap junction protein, alpha 1, 43kDa	X52947|GJA1|2697|gap junction protein, alpha 1, 43kDa	BC026329|GJA1|2697|gap junction protein, alpha 1, 43kDa
hg19_v1_chr12_-_10251520_10251663	0.0838163	SOX2.p2	DQ892440|CLEC1A|51267|C-type lectin domain family 1, member A	DQ895651|CLEC1A|51267|C-type lectin domain family 1, member A	AK300979|CLEC1A|51267|C-type lectin domain family 1, member A	AK291584|CLEC1A|51267|C-type lectin domain family 1, member A	BC039072|CLEC1A|51267|C-type lectin domain family 1, member A	AK313589|CLEC1A|51267|C-type lectin domain family 1, member A	AK075114|CLEC1A|51267|C-type lectin domain family 1, member A	BC067746|CLEC1A|51267|C-type lectin domain family 1, member A	AF200949|CLEC1A|51267|C-type lectin domain family 1, member A	NM_016511|CLEC1A|51267|C-type lectin domain family 1, member A	AK091989|CLEC1A|51267|C-type lectin domain family 1, member A	AY358587|CLEC1A|51267|C-type lectin domain family 1, member A
hg19_v1_chr11_-_5863126_5863126	0.0838028	SOX2.p2	NM_001005167|OR52E6|390078|olfactory receptor, family 52, subfamily E, member 6
hg19_v1_chr6_-_139613114_139613207	0.0834401	SOX2.p2	BX647633|TXLNB|167838|taxilin beta	AL834248|TXLNB|167838|taxilin beta	AL831988|TXLNB|167838|taxilin beta	AK314725|TXLNB|167838|taxilin beta	BX647477|TXLNB|167838|taxilin beta	BC115383|TXLNB|167838|taxilin beta	BC115384|TXLNB|167838|taxilin beta	AB085905|TXLNB|167838|taxilin beta	NM_153235|TXLNB|167838|taxilin beta
hg19_v1_chr3_+_25469833_25469901	0.0834131	SOX2.p2	BC030234|RARB|5915|retinoic acid receptor, beta	NM_000965|RARB|5915|retinoic acid receptor, beta	X07282|RARB|5915|retinoic acid receptor, beta	Y00291|RARB|5915|retinoic acid receptor, beta
hg19_v1_chr1_+_151032683_151032861	0.0828953	SOX2.p2	U16954|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC021703|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC032996|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg19_v1_chr18_+_3453771_3453771	0.0828391	SOX2.p2	NM_173211|TGIF1|7050|TGFB-induced factor homeobox 1
hg19_v1_chr2_-_100722328_100722589	0.0825603	SOX2.p2	AK297407|AFF3|3899|AF4/FMR2 family, member 3	AK092327|AFF3|3899|AF4/FMR2 family, member 3
hg19_v1_chr4_-_109089444_109090154	0.0821206	SOX2.p2	AF288571|LEF1|51176|lymphoid enhancer-binding factor 1	AK225772|LEF1|51176|lymphoid enhancer-binding factor 1	NM_001130713|LEF1|51176|lymphoid enhancer-binding factor 1	NM_001130714|LEF1|51176|lymphoid enhancer-binding factor 1	NM_016269|LEF1|51176|lymphoid enhancer-binding factor 1
hg19_v1_chr11_+_71259465_71259703	0.0819795	SOX2.p2	NM_005553|KRTAP5-9|3846|keratin associated protein 5-9	X63755|KRTAP5-9|3846|keratin associated protein 5-9	BC101744|KRTAP5-9|3846|keratin associated protein 5-9	AB126078|KRTAP5-9|3846|keratin associated protein 5-9	BC069531|KRTAP5-9|3846|keratin associated protein 5-9
hg19_v1_chr18_+_28956739_28956874	0.0819419	SOX2.p2	AY177664|DSG4|147409|desmoglein 4	NM_001134453|DSG4|147409|desmoglein 4	NM_177986|DSG4|147409|desmoglein 4	AY168788|DSG4|147409|desmoglein 4	AY228236|DSG4|147409|desmoglein 4	BC132907|DSG4|147409|desmoglein 4	BC132909|DSG4|147409|desmoglein 4	AY227350|DSG4|147409|desmoglein 4
hg19_v1_chr4_+_95679075_95679138	0.0817484	SOX2.p2	NM_001203|BMPR1B|658|bone morphogenetic protein receptor, type IB	U89326|BMPR1B|658|bone morphogenetic protein receptor, type IB
hg19_v1_chr11_-_84634437_84634464	0.0814914	SOX2.p2	U32376|DLG2|1740|discs, large homolog 2 (Drosophila)	AB209252|DLG2|1740|discs, large homolog 2 (Drosophila)	AK295094|DLG2|1740|discs, large homolog 2 (Drosophila)	NM_001364|DLG2|1740|discs, large homolog 2 (Drosophila)
hg19_v1_chr7_+_93551015_93551098	0.0814476	SOX2.p2	NM_004126|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	BC009709|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11
hg19_v1_chr7_-_96654128_96654261	0.0813889	SOX2.p2	BC006226|DLX5|1749|distal-less homeobox 5	AK023493|DLX5|1749|distal-less homeobox 5	NM_005221|DLX5|1749|distal-less homeobox 5	AK297614|DLX5|1749|distal-less homeobox 5
hg19_v1_chr14_+_85996512_85996571	0.0811128	SOX2.p2	BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2
hg19_v1_chr2_-_218843541_218843551	0.081066	SOX2.p2	AK001785|TNS1|7145|tensin 1
hg19_v1_chr8_-_38325825_38326072	0.0807127	SOX2.p2	M34187|FGFR1|2260|fibroblast growth factor receptor 1	M34188|FGFR1|2260|fibroblast growth factor receptor 1	M34186|FGFR1|2260|fibroblast growth factor receptor 1
hg19_v1_chr5_-_160279045_160279218	0.0806243	SOX2.p2	AB018258|ATP10B|23120|ATPase, class V, type 10B	AK295081|ATP10B|23120|ATPase, class V, type 10B	AK090832|ATP10B|23120|ATPase, class V, type 10B	NM_025153|ATP10B|23120|ATPase, class V, type 10B
hg19_v1_chr17_-_10372875_10372875	0.0802337	SOX2.p2	AF111783|MYH4|4622|myosin, heavy chain 4, skeletal muscle	NM_017533|MYH4|4622|myosin, heavy chain 4, skeletal muscle
hg19_v1_chr11_-_84634219_84634246	0.0800647	SOX2.p2	AK299797|DLG2|1740|discs, large homolog 2 (Drosophila)	BC143964|DLG2|1740|discs, large homolog 2 (Drosophila)
hg19_v1_chr6_-_46293404_46293410	0.0798507	SOX2.p2	D83407|RCAN2|10231|regulator of calcineurin 2	BC038509|RCAN2|10231|regulator of calcineurin 2
hg19_v1_chr3_-_15373807_15374076	0.0798021	SOX2.p2	BC023195|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	DQ892875|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	EU176725|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	AB005047|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	BC010123|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)
hg19_v1_chr3_+_174577069_174577111	0.0797605	SOX2.p2	AJ607396|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	AK308416|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	AL832144|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	NM_207015|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	BC057243|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2
hg19_v1_chr2_-_85641153_85641179	0.079097	SOX2.p2	AK309290|CAPG|822|capping protein (actin filament), gelsolin-like
hg19_v1_chr5_-_39425030_39425098	0.0787049	SOX2.p2	AK314381|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg19_v1_chr16_-_11367451_11367451	0.0786611	SOX2.p2	NM_021247|PRM3|58531|protamine 3
hg19_v1_chr18_+_32398225_32398411	0.0785331	SOX2.p2	FJ535564|DTNA|1837|dystrobrevin, alpha	FJ535565|DTNA|1837|dystrobrevin, alpha	NM_001198942|DTNA|1837|dystrobrevin, alpha	NM_001198944|DTNA|1837|dystrobrevin, alpha	NM_032980|DTNA|1837|dystrobrevin, alpha	NM_032981|DTNA|1837|dystrobrevin, alpha	AK295732|DTNA|1837|dystrobrevin, alpha	U46746|DTNA|1837|dystrobrevin, alpha	AK295789|DTNA|1837|dystrobrevin, alpha	U26743|DTNA|1837|dystrobrevin, alpha	AK315215|DTNA|1837|dystrobrevin, alpha
hg19_v1_chr17_+_57297827_57297970	0.0783409	SOX2.p2	NM_001165993|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	NM_001165994|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	NM_182569|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	AK094770|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	AY271346|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	BC034432|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	EU192951|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1
hg19_v1_chr19_+_10654570_10654590	0.0782713	SOX2.p2	AK294676|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)
hg19_v1_chr22_+_31477231_31477334	0.078096	SOX2.p2	NM_006932|SMTN|6525|smoothelin	NM_134269|SMTN|6525|smoothelin	NM_134270|SMTN|6525|smoothelin	AK128719|SMTN|6525|smoothelin	AF064238|SMTN|6525|smoothelin	AJ010306|SMTN|6525|smoothelin	AY061971|SMTN|6525|smoothelin	AY061972|SMTN|6525|smoothelin	Y13492|SMTN|6525|smoothelin	AK096953|SMTN|6525|smoothelin	AK293681|SMTN|6525|smoothelin	BC034237|SMTN|6525|smoothelin	AK300854|SMTN|6525|smoothelin
hg19_v1_chrX_+_102965836_102965836	0.077771	SOX2.p2	AK130867|TMEM31|203562|transmembrane protein 31	BC029575|TMEM31|203562|transmembrane protein 31	NM_182541|TMEM31|203562|transmembrane protein 31
hg19_v1_chrX_+_100224696_100224696	0.0777685	SOX2.p2	AK301813|ARL13A|392509|ADP-ribosylation factor-like 13A	NM_001012990|ARL13A|392509|ADP-ribosylation factor-like 13A	NM_001162490|ARL13A|392509|ADP-ribosylation factor-like 13A	NM_001162491|ARL13A|392509|ADP-ribosylation factor-like 13A
hg19_v1_chr12_-_70093064_70093195	0.0767584	SOX2.p2	BC151138|BEST3|144453|bestrophin 3	BC006440|BEST3|144453|bestrophin 3	AF440758|BEST3|144453|bestrophin 3	AK096459|BEST3|144453|bestrophin 3	NM_032735|BEST3|144453|bestrophin 3
hg19_v1_chr13_+_113656076_113656223	0.0766248	SOX2.p2	DQ892041|MCF2L|23263|MCF.2 cell line derived transforming sequence-like	DQ895233|MCF2L|23263|MCF.2 cell line derived transforming sequence-like
hg19_v1_chr12_+_57943843_57944051	0.07655	SOX2.p2	BC146670|KIF5A|3798|kinesin family member 5A	BC150208|KIF5A|3798|kinesin family member 5A	NM_004984|KIF5A|3798|kinesin family member 5A	U06698|KIF5A|3798|kinesin family member 5A	AB210045|KIF5A|3798|kinesin family member 5A
hg19_v1_chr15_+_52043738_52043908	0.076533	SOX2.p2	NM_001142885|TMOD2|29767|tropomodulin 2 (neuronal)	NM_014548|TMOD2|29767|tropomodulin 2 (neuronal)	BC036184|TMOD2|29767|tropomodulin 2 (neuronal)	BC064961|TMOD2|29767|tropomodulin 2 (neuronal)	AF177169|TMOD2|29767|tropomodulin 2 (neuronal)	AK293823|TMOD2|29767|tropomodulin 2 (neuronal)	AK292733|TMOD2|29767|tropomodulin 2 (neuronal)
hg19_v1_chr9_+_108424737_108424777	0.0764567	SOX2.p2	BC126373|TAL2|6887|T-cell acute lymphocytic leukemia 2	BC126375|TAL2|6887|T-cell acute lymphocytic leukemia 2	NM_005421|TAL2|6887|T-cell acute lymphocytic leukemia 2	HQ258056|TAL2|6887|T-cell acute lymphocytic leukemia 2	BC069422|TAL2|6887|T-cell acute lymphocytic leukemia 2
hg19_v1_chr19_-_14169970_14169970	0.07623	SOX2.p2	NM_001145028|PALM3|342979|paralemmin 3
hg19_v1_chr5_+_140165875_140165875	0.0762259	SOX2.p2	AF152305|PCDHA1|56147|protocadherin alpha 1	AF152479|PCDHA1|56147|protocadherin alpha 1	AF169695|PCDHA1|56147|protocadherin alpha 1	NM_018900|PCDHA1|56147|protocadherin alpha 1	NM_031410|PCDHA1|56147|protocadherin alpha 1	NM_031411|PCDHA1|56147|protocadherin alpha 1
hg19_v1_chr11_-_83393436_83393467	0.0758848	SOX2.p2	AK299778|DLG2|1740|discs, large homolog 2 (Drosophila)	CR933674|DLG2|1740|discs, large homolog 2 (Drosophila)	NM_001142702|DLG2|1740|discs, large homolog 2 (Drosophila)
hg19_v1_chr14_+_85996454_85996493	0.0754566	SOX2.p2	AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2
hg19_v1_chr1_-_167883243_167883452	0.0749857	SOX2.p2	BC117366|ADCY10|55811|adenylate cyclase 10 (soluble)	BC117372|ADCY10|55811|adenylate cyclase 10 (soluble)	AF176813|ADCY10|55811|adenylate cyclase 10 (soluble)	AF299350|ADCY10|55811|adenylate cyclase 10 (soluble)	AF331033|ADCY10|55811|adenylate cyclase 10 (soluble)	AK310395|ADCY10|55811|adenylate cyclase 10 (soluble)	AK310531|ADCY10|55811|adenylate cyclase 10 (soluble)	AK302884|ADCY10|55811|adenylate cyclase 10 (soluble)	NM_001167749|ADCY10|55811|adenylate cyclase 10 (soluble)	NM_018417|ADCY10|55811|adenylate cyclase 10 (soluble)
hg19_v1_chrX_-_24690740_24690978	0.0748831	SOX2.p2	BC045634|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AK296333|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AK226121|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_001163264|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg19_v1_chr9_+_116343169_116343207	0.0739945	SOX2.p2	U27655|RGS3|5998|regulator of G-protein signaling 3	AK125094|RGS3|5998|regulator of G-protein signaling 3
hg19_v1_chr1_-_202113698_202113850	0.0728472	SOX2.p2	AB118752|ARL8A|127829|ADP-ribosylation factor-like 8A	BC015408|ARL8A|127829|ADP-ribosylation factor-like 8A	AK127138|ARL8A|127829|ADP-ribosylation factor-like 8A	AK313122|ARL8A|127829|ADP-ribosylation factor-like 8A
hg19_v1_chr6_-_64029847_64029881	0.0727476	SOX2.p2	DQ682605|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	DQ682606|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	BC130366|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	BC130368|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	AF242388|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	NM_001143940|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	NM_016571|LGSN|51557|lengsin, lens protein with glutamine synthetase domain
hg19_v1_chr6_+_119215240_119215577	0.0725648	SOX2.p2	NM_014034|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AK025738|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AL050261|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	BC010878|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AB028628|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AF279306|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	CR457347|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)
hg19_v1_chr1_-_51887740_51887792	0.0725418	SOX2.p2	AK090936|EPS15|2060|epidermal growth factor receptor pathway substrate 15	AK308128|EPS15|2060|epidermal growth factor receptor pathway substrate 15	BX647676|EPS15|2060|epidermal growth factor receptor pathway substrate 15	NM_001159969|EPS15|2060|epidermal growth factor receptor pathway substrate 15
hg19_v1_chr2_+_29038862_29038880	0.0723941	SOX2.p2	NM_001008779|SPDYA|245711|speedy homolog A (Xenopus laevis)	AY820303|SPDYA|245711|speedy homolog A (Xenopus laevis)	AY820304|SPDYA|245711|speedy homolog A (Xenopus laevis)
hg19_v1_chr13_-_61989654_61989654	0.0721371	SOX2.p2	AK289924|PCDH20|64881|protocadherin 20	NM_022843|PCDH20|64881|protocadherin 20
hg19_v1_chr7_+_28448970_28449007	0.0720017	SOX2.p2	BC087859|LOC401317|401317|uncharacterized LOC401317
hg19_v1_chr5_-_157002739_157002871	0.0719908	SOX2.p2	AF311317|ADAM19|8728|ADAM metallopeptidase domain 19	AF326918|ADAM19|8728|ADAM metallopeptidase domain 19	Y13786|ADAM19|8728|ADAM metallopeptidase domain 19	AK091464|ADAM19|8728|ADAM metallopeptidase domain 19	AK308182|ADAM19|8728|ADAM metallopeptidase domain 19	NM_033274|ADAM19|8728|ADAM metallopeptidase domain 19
hg19_v1_chr12_-_18243052_18243113	0.071977	SOX2.p2	AK026308|RERGL|79785|RERG/RAS-like	BC042888|RERGL|79785|RERG/RAS-like	NM_024730|RERGL|79785|RERG/RAS-like
hg19_v1_chr4_-_109087876_109087952	0.0719434	SOX2.p2	AK303272|LEF1|51176|lymphoid enhancer-binding factor 1	NM_001166119|LEF1|51176|lymphoid enhancer-binding factor 1
hg19_v1_chr19_+_13906207_13906284	0.0719314	SOX2.p2	AK024452|ZSWIM4|65249|zinc finger, SWIM-type containing 4	NM_023072|ZSWIM4|65249|zinc finger, SWIM-type containing 4
hg19_v1_chr17_+_36861857_36861924	0.0718858	SOX2.p2	AK310435|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	AK310437|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	NM_005937|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	U07932|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	AB209633|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
hg19_v1_chr6_-_32163890_32163924	0.071577	SOX2.p2	BC033869|NOTCH4|4855|notch 4
hg19_v1_chr14_+_54976545_54976677	0.0714998	SOX2.p2	AK315318|CGRRF1|10668|cell growth regulator with ring finger domain 1	AK289478|CGRRF1|10668|cell growth regulator with ring finger domain 1	NM_006568|CGRRF1|10668|cell growth regulator with ring finger domain 1	BC015063|CGRRF1|10668|cell growth regulator with ring finger domain 1	U66469|CGRRF1|10668|cell growth regulator with ring finger domain 1	EU832831|CGRRF1|10668|cell growth regulator with ring finger domain 1	GQ129438|CGRRF1|10668|cell growth regulator with ring finger domain 1
hg19_v1_chr14_-_60097223_60097308	0.0714525	SOX2.p2	CR457030|RTN1|6252|reticulon 1	L10335|RTN1|6252|reticulon 1
hg19_v1_chrX_-_73512376_73512434	0.0714429	SOX2.p2	AK057701|FTX|100302692|FTX transcript, XIST regulator (non-protein coding)
hg19_v1_chr2_+_187454987_187455067	0.071335	SOX2.p2	EF560727|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)	M14648|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)
hg19_v1_chr8_+_82192717_82192830	0.0712414	SOX2.p2	NM_001444|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	AK226036|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	AK311856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	BC070303|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	BC019385|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	M94856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	DQ891285|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	DQ894470|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	BT007449|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)
hg19_v1_chr3_-_189840225_189840225	0.0710362	SOX2.p2	NM_001134418|LEPREL1|55214|leprecan-like 1
hg19_v1_chr14_-_91884138_91884159	0.0709648	SOX2.p2	AF070587|CCDC88C|440193|coiled-coil domain containing 88C
hg19_v1_chr4_+_166131170_166131187	0.0708519	SOX2.p2	NM_001161521|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	NM_001161522|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	AK294103|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	BX647776|KLHL2|11275|kelch-like 2, Mayven (Drosophila)
hg19_v1_chr12_+_32260084_32260263	0.0707396	SOX2.p2	AK313430|BICD1|636|bicaudal D homolog 1 (Drosophila)	AK290188|BICD1|636|bicaudal D homolog 1 (Drosophila)	NM_001003398|BICD1|636|bicaudal D homolog 1 (Drosophila)	NM_001714|BICD1|636|bicaudal D homolog 1 (Drosophila)	U90028|BICD1|636|bicaudal D homolog 1 (Drosophila)	BC136372|BICD1|636|bicaudal D homolog 1 (Drosophila)
hg19_v1_chr21_+_33664123_33664123	0.0703432	SOX2.p2	AF454915|MRAP|56246|melanocortin 2 receptor accessory protein	AF454916|MRAP|56246|melanocortin 2 receptor accessory protein	NM_178817|MRAP|56246|melanocortin 2 receptor accessory protein	NM_206898|MRAP|56246|melanocortin 2 receptor accessory protein
hg19_v1_chrX_+_48368063_48368208	0.0702948	SOX2.p2	AK316378|PORCN|64840|porcupine homolog (Drosophila)	NM_203474|PORCN|64840|porcupine homolog (Drosophila)	NM_203475|PORCN|64840|porcupine homolog (Drosophila)	AF317058|PORCN|64840|porcupine homolog (Drosophila)	AF317059|PORCN|64840|porcupine homolog (Drosophila)	AF317060|PORCN|64840|porcupine homolog (Drosophila)	AF317061|PORCN|64840|porcupine homolog (Drosophila)	DQ892632|PORCN|64840|porcupine homolog (Drosophila)	DQ895869|PORCN|64840|porcupine homolog (Drosophila)
hg19_v1_chr1_-_11907741_11907842	0.0702391	SOX2.p2	DQ893115|NPPA|4878|natriuretic peptide A	DQ896389|NPPA|4878|natriuretic peptide A	EU176780|NPPA|4878|natriuretic peptide A	M30262|NPPA|4878|natriuretic peptide A	BC005893|NPPA|4878|natriuretic peptide A	NM_006172|NPPA|4878|natriuretic peptide A
hg19_v1_chr19_-_15590203_15590316	0.0701846	SOX2.p2	BC136551|PGLYRP2|114770|peptidoglycan recognition protein 2	BC136552|PGLYRP2|114770|peptidoglycan recognition protein 2	BC144238|PGLYRP2|114770|peptidoglycan recognition protein 2	AF384856|PGLYRP2|114770|peptidoglycan recognition protein 2	AY358156|PGLYRP2|114770|peptidoglycan recognition protein 2	AK289415|PGLYRP2|114770|peptidoglycan recognition protein 2	AB073610|PGLYRP2|114770|peptidoglycan recognition protein 2	AK055882|PGLYRP2|114770|peptidoglycan recognition protein 2	NM_052890|PGLYRP2|114770|peptidoglycan recognition protein 2
hg19_v1_chr12_-_26277807_26278036	0.07005	SOX2.p2	AY665467|BHLHE41|79365|basic helix-loop-helix family, member e41	AK303677|BHLHE41|79365|basic helix-loop-helix family, member e41	AB044088|BHLHE41|79365|basic helix-loop-helix family, member e41	BC025968|BHLHE41|79365|basic helix-loop-helix family, member e41	NM_030762|BHLHE41|79365|basic helix-loop-helix family, member e41
hg19_v1_chr5_+_15500288_15500310	0.0700449	SOX2.p2	AB020647|FBXL7|23194|F-box and leucine-rich repeat protein 7	NM_012304|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg19_v1_chr20_+_31367637_31367657	0.0694881	SOX2.p2	AF176228|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta	NM_175850|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta
hg19_v1_chr17_+_4613780_4613928	0.0693401	SOX2.p2	NM_004313|ARRB2|409|arrestin, beta 2	NM_199004|ARRB2|409|arrestin, beta 2	AK297059|ARRB2|409|arrestin, beta 2	AK097542|ARRB2|409|arrestin, beta 2
hg19_v1_chr12_-_95945226_95945262	0.0693098	SOX2.p2	AL136825|USP44|84101|ubiquitin specific peptidase 44	NM_032147|USP44|84101|ubiquitin specific peptidase 44
hg19_v1_chr7_+_156803599_156803613	0.069025	SOX2.p2	BC022831|LOC645249|645249|uncharacterized LOC645249	BC033117|LOC645249|645249|uncharacterized LOC645249
hg19_v1_chr8_+_32504250_32504250	0.0686804	SOX2.p2	AK289927|NRG1|3084|neuregulin 1	NM_013959|NRG1|3084|neuregulin 1
hg19_v1_chr1_+_10459084_10459174	0.0679695	SOX2.p2	NM_002631|PGD|5226|phosphogluconate dehydrogenase	AK300952|PGD|5226|phosphogluconate dehydrogenase	AK290404|PGD|5226|phosphogluconate dehydrogenase	AK296889|PGD|5226|phosphogluconate dehydrogenase	AK303898|PGD|5226|phosphogluconate dehydrogenase	AK304423|PGD|5226|phosphogluconate dehydrogenase	BC000368|PGD|5226|phosphogluconate dehydrogenase	U30255|PGD|5226|phosphogluconate dehydrogenase	AK298830|PGD|5226|phosphogluconate dehydrogenase
hg19_v1_chr14_+_69658215_69658290	0.0679322	SOX2.p2	CR936729|EXD2|55218|exonuclease 3'-5' domain containing 2	BX647767|EXD2|55218|exonuclease 3'-5' domain containing 2	CR936728|EXD2|55218|exonuclease 3'-5' domain containing 2	AK056025|EXD2|55218|exonuclease 3'-5' domain containing 2	AL834434|EXD2|55218|exonuclease 3'-5' domain containing 2
hg19_v1_chr7_-_11871735_11871844	0.0678607	SOX2.p2	AK092252|THSD7A|221981|thrombospondin, type I, domain containing 7A	NM_015204|THSD7A|221981|thrombospondin, type I, domain containing 7A
hg19_v1_chr14_+_69658193_69658214	0.0675144	SOX2.p2	NM_001193360|EXD2|55218|exonuclease 3'-5' domain containing 2	NM_001193361|EXD2|55218|exonuclease 3'-5' domain containing 2	NM_018199|EXD2|55218|exonuclease 3'-5' domain containing 2
hg19_v1_chr11_+_65339819_65340044	0.0670318	SOX2.p2	BC032373|FAM89B|23625|family with sequence similarity 89, member B	NM_001098784|FAM89B|23625|family with sequence similarity 89, member B	NM_001098785|FAM89B|23625|family with sequence similarity 89, member B	NM_152832|FAM89B|23625|family with sequence similarity 89, member B	AF052151|FAM89B|23625|family with sequence similarity 89, member B
hg19_v1_chr12_+_120907599_120907691	0.0669703	SOX2.p2	NM_001037494|DYNLL1|8655|dynein, light chain, LC8-type 1
hg19_v1_chr6_-_130536417_130536493	0.0667767	SOX2.p2	BC029851|SAMD3|154075|sterile alpha motif domain containing 3	BC119757|SAMD3|154075|sterile alpha motif domain containing 3	BC119758|SAMD3|154075|sterile alpha motif domain containing 3	BC127653|SAMD3|154075|sterile alpha motif domain containing 3	BC127654|SAMD3|154075|sterile alpha motif domain containing 3	NM_152552|SAMD3|154075|sterile alpha motif domain containing 3
hg19_v1_chr10_+_72972268_72972493	0.0667648	SOX2.p2	AK128132|UNC5B|219699|unc-5 homolog B (C. elegans)	NM_001244889|UNC5B|219699|unc-5 homolog B (C. elegans)	NM_170744|UNC5B|219699|unc-5 homolog B (C. elegans)	AY358351|UNC5B|219699|unc-5 homolog B (C. elegans)	AB096256|UNC5B|219699|unc-5 homolog B (C. elegans)
hg19_v1_chr1_-_117210301_117210466	0.0666918	SOX2.p2	NM_001007237|IGSF3|3321|immunoglobulin superfamily, member 3	NM_001542|IGSF3|3321|immunoglobulin superfamily, member 3	BC110651|IGSF3|3321|immunoglobulin superfamily, member 3
hg19_v1_chr12_-_11036815_11036873	0.0666784	SOX2.p2	BC128192|PRH1|5554|proline-rich protein HaeIII subfamily 1	BC133676|PRH1|5554|proline-rich protein HaeIII subfamily 1	K03203|PRH1|5554|proline-rich protein HaeIII subfamily 1	NM_006250|PRH1|5554|proline-rich protein HaeIII subfamily 1
hg19_v1_chr4_-_82393025_82393096	0.06653	SOX2.p2	AK291459|RASGEF1B|153020|RasGEF domain family, member 1B	BC036784|RASGEF1B|153020|RasGEF domain family, member 1B	AK303625|RASGEF1B|153020|RasGEF domain family, member 1B	AK056257|RASGEF1B|153020|RasGEF domain family, member 1B	NM_152545|RASGEF1B|153020|RasGEF domain family, member 1B
hg19_v1_chr1_+_150255228_150255258	0.0665196	SOX2.p2	BC047238|C1orf51|148523|chromosome 1 open reading frame 51	NM_144697|C1orf51|148523|chromosome 1 open reading frame 51	AK098755|C1orf51|148523|chromosome 1 open reading frame 51	AK315397|C1orf51|148523|chromosome 1 open reading frame 51
hg19_v1_chr10_+_123923104_123923358	0.0664166	SOX2.p2	NM_006997|TACC2|10579|transforming, acidic coiled-coil containing protein 2	NM_206860|TACC2|10579|transforming, acidic coiled-coil containing protein 2	BC141837|TACC2|10579|transforming, acidic coiled-coil containing protein 2	BC142673|TACC2|10579|transforming, acidic coiled-coil containing protein 2	AF095791|TACC2|10579|transforming, acidic coiled-coil containing protein 2
hg19_v1_chr4_+_2820540_2820540	0.0659218	SOX2.p2	AB000462|SH3BP2|6452|SH3-domain binding protein 2	AB000463|SH3BP2|6452|SH3-domain binding protein 2	NM_003023|SH3BP2|6452|SH3-domain binding protein 2
hg19_v1_chr3_-_139258373_139258472	0.0659217	SOX2.p2	CR541979|RBP1|5947|retinol binding protein 1, cellular	CR542005|RBP1|5947|retinol binding protein 1, cellular	EU831403|RBP1|5947|retinol binding protein 1, cellular	EU831495|RBP1|5947|retinol binding protein 1, cellular	BC121052|RBP1|5947|retinol binding protein 1, cellular	M36809|RBP1|5947|retinol binding protein 1, cellular
hg19_v1_chr11_+_5905500_5905522	0.0656537	SOX2.p2	BC136972|OR52E4|390081|olfactory receptor, family 52, subfamily E, member 4	BC136974|OR52E4|390081|olfactory receptor, family 52, subfamily E, member 4	NM_001005165|OR52E4|390081|olfactory receptor, family 52, subfamily E, member 4
hg19_v1_chr5_-_33891967_33892123	0.0655422	SOX2.p2	BC139900|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	BC131733|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	AY358745|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	BC058841|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	NM_030955|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12
hg19_v1_chr19_-_36247917_36247945	0.0653998	SOX2.p2	BC068046|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	AK297852|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	AK056951|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	NM_144617|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6
hg19_v1_chr21_+_30671736_30671736	0.0648351	SOX2.p2	AF026199|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1	NM_206866|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1
hg19_v1_chr2_-_38829615_38829768	0.0648256	SOX2.p2	
hg19_v1_chr4_+_41983712_41983839	0.0646467	SOX2.p2	NM_001029955|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC052943|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC104224|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC104225|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	AK122914|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC035027|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1
hg19_v1_chr1_-_155178968_155178986	0.0645011	SOX2.p2	AK311031|THBS3|7059|thrombospondin 3
hg19_v1_chr1_+_198608216_198608234	0.0644668	SOX2.p2	AK307635|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK130573|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK292131|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK299986|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK303539|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC017863|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	Y00638|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC014239|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC031525|PTPRC|5788|protein tyrosine phosphatase, receptor type, C
hg19_v1_chr17_-_7298160_7298161	0.0643343	SOX2.p2	NM_001201576|PLSCR3|57048|phospholipid scramblase 3	NM_020360|PLSCR3|57048|phospholipid scramblase 3
hg19_v1_chr8_+_54764367_54764459	0.0643268	SOX2.p2	AY046538|RGS20|8601|regulator of G-protein signaling 20	NM_170587|RGS20|8601|regulator of G-protein signaling 20	AF366054|RGS20|8601|regulator of G-protein signaling 20	AF366055|RGS20|8601|regulator of G-protein signaling 20	AF366056|RGS20|8601|regulator of G-protein signaling 20
hg19_v1_chr1_-_173638970_173639002	0.0643241	SOX2.p2	AK127170|ANKRD45|339416|ankyrin repeat domain 45	BC126353|ANKRD45|339416|ankyrin repeat domain 45	BC126355|ANKRD45|339416|ankyrin repeat domain 45	NM_198493|ANKRD45|339416|ankyrin repeat domain 45
hg19_v1_chr3_-_13057130_13057306	0.0640241	SOX2.p2	
hg19_v1_chrX_+_37865834_37865866	0.0639499	SOX2.p2	BX647688|SYTL5|94122|synaptotagmin-like 5	NM_001163335|SYTL5|94122|synaptotagmin-like 5	NM_138780|SYTL5|94122|synaptotagmin-like 5	AK125106|SYTL5|94122|synaptotagmin-like 5
hg19_v1_chr14_-_23288912_23289019	0.0638174	SOX2.p2	Y18474|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7	BX248291|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7	AF092032|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7	AJ130718|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7	NM_001126106|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7
hg19_v1_chr12_-_70083055_70083056	0.0635684	SOX2.p2	NM_152439|BEST3|144453|bestrophin 3	BC028087|BEST3|144453|bestrophin 3
hg19_v1_chr19_-_4182495_4182595	0.0634642	SOX2.p2	DQ896358|SIRT6|51548|sirtuin 6	EU176413|SIRT6|51548|sirtuin 6	CR457200|SIRT6|51548|sirtuin 6	BC005026|SIRT6|51548|sirtuin 6	BC004218|SIRT6|51548|sirtuin 6	AK299420|SIRT6|51548|sirtuin 6	BC028220|SIRT6|51548|sirtuin 6	AK293348|SIRT6|51548|sirtuin 6	AK315048|SIRT6|51548|sirtuin 6	AK301247|SIRT6|51548|sirtuin 6	AK074810|SIRT6|51548|sirtuin 6	AK225567|SIRT6|51548|sirtuin 6	AF233396|SIRT6|51548|sirtuin 6	NM_001193285|SIRT6|51548|sirtuin 6	NM_016539|SIRT6|51548|sirtuin 6
hg19_v1_chr3_+_151531860_151531949	0.0634282	SOX2.p2	NM_001086|AADAC|13|arylacetamide deacetylase (esterase)	L32179|AADAC|13|arylacetamide deacetylase (esterase)	BC020706|AADAC|13|arylacetamide deacetylase (esterase)	AK290628|AADAC|13|arylacetamide deacetylase (esterase)	BC032309|AADAC|13|arylacetamide deacetylase (esterase)
hg19_v1_chr2_+_217498082_217498190	0.0633904	SOX2.p2	NM_000597|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	X16302|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	BC071967|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	AB209509|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	BC004312|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	BC009902|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	BC012769|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	M35410|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa
hg19_v1_chr3_-_58563490_58563490	0.0632083	SOX2.p2	AF035283|FAM107A|11170|family with sequence similarity 107, member A	NM_001076778|FAM107A|11170|family with sequence similarity 107, member A	NM_007177|FAM107A|11170|family with sequence similarity 107, member A
hg19_v1_chr5_-_41510627_41510729	0.0631989	SOX2.p2	AK127142|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3	BX648329|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3	NM_001005473|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3
hg19_v1_chrX_+_107288199_107288320	0.0631375	SOX2.p2	BX648658|VSIG1|340547|V-set and immunoglobulin domain containing 1	NM_001170553|VSIG1|340547|V-set and immunoglobulin domain containing 1	NM_182607|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK301783|VSIG1|340547|V-set and immunoglobulin domain containing 1	BC043216|VSIG1|340547|V-set and immunoglobulin domain containing 1	BX640913|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK315846|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK301311|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK292472|VSIG1|340547|V-set and immunoglobulin domain containing 1
hg19_v1_chr3_+_138066489_138066538	0.0630458	SOX2.p2	NM_001252091|MRAS|22808|muscle RAS oncogene homolog	NM_012219|MRAS|22808|muscle RAS oncogene homolog	AK124954|MRAS|22808|muscle RAS oncogene homolog
hg19_v1_chr20_+_19870209_19870245	0.0628371	SOX2.p2	BC128065|RIN2|54453|Ras and Rab interactor 2	NM_018993|RIN2|54453|Ras and Rab interactor 2	AB060339|RIN2|54453|Ras and Rab interactor 2
hg19_v1_chr11_+_61248584_61248652	0.0627211	SOX2.p2	NM_001170753|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32	NM_145017|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32	AK057333|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32	BC043246|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32	JF442033|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32
hg19_v1_chr13_+_24144402_24144508	0.0626382	SOX2.p2	NM_001204459|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19	NM_148957|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19
hg19_v1_chr7_+_69064580_69064596	0.0626253	SOX2.p2	BC011643|AUTS2|26053|autism susceptibility candidate 2
hg19_v1_chr2_-_192711651_192711826	0.0625385	SOX2.p2	DQ891440|SDPR|8436|serum deprivation response	DQ894617|SDPR|8436|serum deprivation response	BC016475|SDPR|8436|serum deprivation response	AF085481|SDPR|8436|serum deprivation response	AK026943|SDPR|8436|serum deprivation response
hg19_v1_chr5_+_175792444_175792534	0.0625201	SOX2.p2	BC059361|ARL10|285598|ADP-ribosylation factor-like 10	NM_173664|ARL10|285598|ADP-ribosylation factor-like 10
hg19_v1_chr7_+_115850546_115850760	0.0623961	SOX2.p2	NM_015641|TES|26136|testis derived transcript (3 LIM domains)	AK299104|TES|26136|testis derived transcript (3 LIM domains)	BC001451|TES|26136|testis derived transcript (3 LIM domains)	AK021575|TES|26136|testis derived transcript (3 LIM domains)	AK300546|TES|26136|testis derived transcript (3 LIM domains)	AK309324|TES|26136|testis derived transcript (3 LIM domains)	AK222840|TES|26136|testis derived transcript (3 LIM domains)	AF245356|TES|26136|testis derived transcript (3 LIM domains)	AJ250865|TES|26136|testis derived transcript (3 LIM domains)	AK315644|TES|26136|testis derived transcript (3 LIM domains)	EU176352|TES|26136|testis derived transcript (3 LIM domains)	EU176694|TES|26136|testis derived transcript (3 LIM domains)
hg19_v1_chr4_+_110749149_110749158	0.0623807	SOX2.p2	NM_006583|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128120|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128121|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128401|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog
hg19_v1_chr11_-_67141647_67141647	0.0619613	SOX2.p2	AK298052|CLCF1|23529|cardiotrophin-like cytokine factor 1	NM_001166212|CLCF1|23529|cardiotrophin-like cytokine factor 1
hg19_v1_chr8_-_105601234_105601261	0.0619145	SOX2.p2	AK299374|LRP12|29967|low density lipoprotein receptor-related protein 12	NM_001135703|LRP12|29967|low density lipoprotein receptor-related protein 12	NM_013437|LRP12|29967|low density lipoprotein receptor-related protein 12
hg19_v1_chr11_-_85430382_85430382	0.0612118	SOX2.p2	NM_001162952|SYTL2|54843|synaptotagmin-like 2	NM_206930|SYTL2|54843|synaptotagmin-like 2
hg19_v1_chr1_+_198608136_198608210	0.060898	SOX2.p2	NM_002838|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	NM_080921|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	NM_080923|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK308217|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK310898|PTPRC|5788|protein tyrosine phosphatase, receptor type, C
hg19_v1_chr2_+_26257384_26257550	0.0605401	SOX2.p2	AF086917|RAB10|10890|RAB10, member RAS oncogene family	AF106681|RAB10|10890|RAB10, member RAS oncogene family	BC000896|RAB10|10890|RAB10, member RAS oncogene family	AF297660|RAB10|10890|RAB10, member RAS oncogene family	AF498945|RAB10|10890|RAB10, member RAS oncogene family	CR457303|RAB10|10890|RAB10, member RAS oncogene family	EU831649|RAB10|10890|RAB10, member RAS oncogene family	EU831733|RAB10|10890|RAB10, member RAS oncogene family	AF091032|RAB10|10890|RAB10, member RAS oncogene family
hg19_v1_chr11_-_5537815_5537955	0.0605275	SOX2.p2	BC012183|UBQLNL|143630|ubiquilin-like	BC034977|UBQLNL|143630|ubiquilin-like	AK057255|UBQLNL|143630|ubiquilin-like	NM_145053|UBQLNL|143630|ubiquilin-like
hg19_v1_chr9_+_77112251_77112298	0.0599185	SOX2.p2	NM_006914|RORB|6096|RAR-related orphan receptor B	BC051830|RORB|6096|RAR-related orphan receptor B	Y08639|RORB|6096|RAR-related orphan receptor B
hg19_v1_chr13_+_46276445_46276445	0.0598646	SOX2.p2	AK093129|SPERT|220082|spermatid associated	NM_152719|SPERT|220082|spermatid associated
hg19_v1_chr6_+_26020677_26020717	0.0588458	SOX2.p2	BC066245|HIST1H3A|8350|histone cluster 1, H3a	BC066246|HIST1H3A|8350|histone cluster 1, H3a	BC066247|HIST1H3A|8350|histone cluster 1, H3a	BC067490|HIST1H3A|8350|histone cluster 1, H3a	BC067491|HIST1H3A|8350|histone cluster 1, H3a	BC069303|HIST1H3A|8350|histone cluster 1, H3a	CR541858|HIST1H3A|8350|histone cluster 1, H3a	NM_003529|HIST1H3A|8350|histone cluster 1, H3a
hg19_v1_chr4_+_48485276_48485578	0.0588094	SOX2.p2	AK126542|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	NM_152679|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	BC019066|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	BC012048|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	DQ892628|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	EU176704|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	AY704414|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4
hg19_v1_chr8_+_126442557_126442601	0.0587486	SOX2.p2	BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)	NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)
hg19_v1_chr6_-_47253962_47254003	0.0586737	SOX2.p2	BC010241|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr2_-_175869910_175870116	0.0586138	SOX2.p2	AK289941|CHN1|1123|chimerin (chimaerin) 1	BC011393|CHN1|1123|chimerin (chimaerin) 1	NM_001822|CHN1|1123|chimerin (chimaerin) 1	AB209788|CHN1|1123|chimerin (chimaerin) 1	AK300890|CHN1|1123|chimerin (chimaerin) 1	NM_001025201|CHN1|1123|chimerin (chimaerin) 1
hg19_v1_chrX_+_149613719_149613846	0.0585861	SOX2.p2	NM_001177466|MAMLD1|10046|mastermind-like domain containing 1	NM_005491|MAMLD1|10046|mastermind-like domain containing 1	U46023|MAMLD1|10046|mastermind-like domain containing 1	BC136324|MAMLD1|10046|mastermind-like domain containing 1	AK315217|MAMLD1|10046|mastermind-like domain containing 1
hg19_v1_chr9_-_123476578_123476857	0.0585517	SOX2.p2	AY358370|MEGF9|1955|multiple EGF-like-domains 9	AK295380|MEGF9|1955|multiple EGF-like-domains 9	NM_001080497|MEGF9|1955|multiple EGF-like-domains 9
hg19_v1_chr11_-_112034671_112034846	0.0585025	SOX2.p2	AF380360|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	AY044641|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	AY266351|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	D49950|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	BC007007|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	AK311301|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	BC007461|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	NM_001243211|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	NM_001562|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)
hg19_v1_chr19_+_51815095_51815101	0.0584567	SOX2.p2	NM_001101372|IGLON5|402665|IgLON family member 5
hg19_v1_chr18_-_51690988_51690996	0.0584368	SOX2.p2	AL110266|MBD2|8932|methyl-CpG binding domain protein 2
hg19_v1_chr18_+_31158540_31158578	0.0584338	SOX2.p2	NM_030632|ASXL3|80816|additional sex combs like 3 (Drosophila)	AK131454|ASXL3|80816|additional sex combs like 3 (Drosophila)
hg19_v1_chr1_+_228337414_228337414	0.0580873	SOX2.p2	BC089439|GJC2|57165|gap junction protein, gamma 2, 47kDa	NM_020435|GJC2|57165|gap junction protein, gamma 2, 47kDa
hg19_v1_chr9_-_134955056_134955242	0.0580296	SOX2.p2	Z36848|MED27|9442|mediator complex subunit 27	AF104252|MED27|9442|mediator complex subunit 27	AF230382|MED27|9442|mediator complex subunit 27	DQ099387|MED27|9442|mediator complex subunit 27	EU446747|MED27|9442|mediator complex subunit 27	BC064608|MED27|9442|mediator complex subunit 27	BC070331|MED27|9442|mediator complex subunit 27
hg19_v1_chr4_-_141075232_141075433	0.0576079	SOX2.p2	NM_018717|MAML3|55534|mastermind-like 3 (Drosophila)
hg19_v1_chr11_-_35440514_35440909	0.0575658	SOX2.p2	AB209444|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	U03505|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	D85884|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	Z32517|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	AK298769|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	BC132768|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	AY066021|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v1_chr12_+_95611514_95611874	0.0575416	SOX2.p2	NM_017599|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK001338|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK225303|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK309943|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK225356|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC014443|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK307864|VEZT|55591|vezatin, adherens junctions transmembrane protein	AL137497|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC064939|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC028597|VEZT|55591|vezatin, adherens junctions transmembrane protein
hg19_v1_chr6_-_133035180_133035196	0.0575256	SOX2.p2	U39664|VNN1|8876|vanin 1	BC096268|VNN1|8876|vanin 1	AJ132099|VNN1|8876|vanin 1	BC096265|VNN1|8876|vanin 1	BC096266|VNN1|8876|vanin 1	BC096267|VNN1|8876|vanin 1	AK290425|VNN1|8876|vanin 1	AK314265|VNN1|8876|vanin 1	NM_004666|VNN1|8876|vanin 1
hg19_v1_chr1_+_156052330_156052417	0.0574186	SOX2.p2	AK056143|LMNA|4000|lamin A/C
hg19_v1_chr10_-_14646237_14646398	0.0573795	SOX2.p2	BC064407|FAM107B|83641|family with sequence similarity 107, member B
hg19_v1_chr3_-_149095458_149095486	0.0573156	SOX2.p2	AK130073|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr5_-_114631964_114631986	0.0572184	SOX2.p2	BC031242|CCDC112|153733|coiled-coil domain containing 112	NM_152549|CCDC112|153733|coiled-coil domain containing 112
hg19_v1_chr18_+_55888750_55888774	0.0571337	SOX2.p2	NM_001144966|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AY243319|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg19_v1_chr7_+_143058794_143058809	0.0570567	SOX2.p2	AK316227|ZYX|7791|zyxin
hg19_v1_chr3_+_111260925_111261007	0.0568618	SOX2.p2	NM_005816|CD96|10225|CD96 molecule	NM_198196|CD96|10225|CD96 molecule	BC020749|CD96|10225|CD96 molecule	BC027914|CD96|10225|CD96 molecule
hg19_v1_chr18_+_11751470_11751561	0.0568346	SOX2.p2	AK313902|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	AK290054|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	NM_001142339|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	NM_002071|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type
hg19_v1_chr3_-_152058778_152058778	0.0568143	SOX2.p2	AY358260|TMEM14E|645843|transmembrane protein 14E	NM_001123228|TMEM14E|645843|transmembrane protein 14E
hg19_v1_chr3_+_182971592_182971620	0.0563892	SOX2.p2	AK091474|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg19_v1_chr16_+_4845265_4845378	0.0563879	SOX2.p2	NM_001253793|LOC440335|440335|uncharacterized LOC440335	NM_001253794|LOC440335|440335|uncharacterized LOC440335
hg19_v1_chr20_-_20693122_20693334	0.0563604	SOX2.p2	DQ310704|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)	BC171842|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)	NM_020343|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)
hg19_v1_chr7_+_105603656_105603741	0.0559804	SOX2.p2	NM_152750|CDHR3|222256|cadherin-related family member 3	AK126338|CDHR3|222256|cadherin-related family member 3	AK131293|CDHR3|222256|cadherin-related family member 3	AK304118|CDHR3|222256|cadherin-related family member 3	BC111696|CDHR3|222256|cadherin-related family member 3	BC111738|CDHR3|222256|cadherin-related family member 3	AK304352|CDHR3|222256|cadherin-related family member 3
hg19_v1_chrX_+_99899388_99899402	0.0559352	SOX2.p2	BC020733|SRPX2|27286|sushi-repeat containing protein, X-linked 2
hg19_v1_chr1_+_90098624_90098642	0.0557477	SOX2.p2	BC036122|LRRC8C|84230|leucine rich repeat containing 8 family, member C
hg19_v1_chr10_-_99094264_99094330	0.0555941	SOX2.p2	BT009770|FRAT2|23401|frequently rearranged in advanced T-cell lymphomas 2	DQ895557|FRAT2|23401|frequently rearranged in advanced T-cell lymphomas 2
hg19_v1_chr8_+_86157732_86157755	0.0553954	SOX2.p2	BC052602|CA13|377677|carbonic anhydrase XIII
hg19_v1_chr20_-_4804067_4804321	0.0552752	SOX2.p2	CR627436|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AK291458|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AK222650|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AY154470|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	D79990|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	NM_014737|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2
hg19_v1_chr22_-_31688329_31688519	0.0549814	SOX2.p2	CR456340|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	GU135609|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AK226089|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AK300990|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AF528079|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AF528080|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	BC011049|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AK074688|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AK299397|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	NM_001135911|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	NM_052880|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1
hg19_v1_chr3_+_38307297_38307396	0.0548832	SOX2.p2	NM_004256|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13	AK315301|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13	BC035973|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13	AB010438|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13	AK298375|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13
hg19_v1_chr17_+_33570079_33570107	0.0546121	SOX2.p2	NM_144975|SLFN5|162394|schlafen family member 5	AK303632|SLFN5|162394|schlafen family member 5	BX647942|SLFN5|162394|schlafen family member 5	AK054668|SLFN5|162394|schlafen family member 5	AK303299|SLFN5|162394|schlafen family member 5	BC021238|SLFN5|162394|schlafen family member 5
hg19_v1_chr8_+_26435590_26435770	0.0545804	SOX2.p2	U17279|DPYSL2|1808|dihydropyrimidinase-like 2	AB370194|DPYSL2|1808|dihydropyrimidinase-like 2
hg19_v1_chr21_+_35190586_35190755	0.0545442	SOX2.p2	AY340592|ITSN1|6453|intersectin 1 (SH3 domain protein)	AY340593|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF180522|ITSN1|6453|intersectin 1 (SH3 domain protein)	AY138139|ITSN1|6453|intersectin 1 (SH3 domain protein)
hg19_v1_chr8_-_67090690_67090845	0.0544305	SOX2.p2	BC002599|CRH|1392|corticotropin releasing hormone	BC011031|CRH|1392|corticotropin releasing hormone	AK075431|CRH|1392|corticotropin releasing hormone	NM_000756|CRH|1392|corticotropin releasing hormone
hg19_v1_chr5_-_132161863_132162001	0.054118	SOX2.p2	BC104914|SHROOM1|134549|shroom family member 1	BC104916|SHROOM1|134549|shroom family member 1	BC143494|SHROOM1|134549|shroom family member 1	AF314142|SHROOM1|134549|shroom family member 1	NM_133456|SHROOM1|134549|shroom family member 1
hg19_v1_chr2_+_158114109_158114477	0.0541022	SOX2.p2	BC142676|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	BC142703|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	AY277591|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	NM_014568|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	AK292154|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	BC144211|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)
hg19_v1_chr15_+_69606741_69606741	0.0539372	SOX2.p2	AK000197|PAQR5|54852|progestin and adipoQ receptor family member V	AY424283|PAQR5|54852|progestin and adipoQ receptor family member V	NM_001104554|PAQR5|54852|progestin and adipoQ receptor family member V
hg19_v1_chr22_+_50609159_50609189	0.0539268	SOX2.p2	AK299910|PANX2|56666|pannexin 2	NM_001160300|PANX2|56666|pannexin 2	NM_052839|PANX2|56666|pannexin 2	AK096019|PANX2|56666|pannexin 2	AF398510|PANX2|56666|pannexin 2	AF398511|PANX2|56666|pannexin 2	BC101023|PANX2|56666|pannexin 2
hg19_v1_chr11_+_118215058_118215111	0.0538741	SOX2.p2	NM_000073|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK313966|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK315895|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK310622|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	BC069685|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	X04145|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK223314|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK310578|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	BC113830|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)
hg19_v1_chr11_+_77532159_77532248	0.0537608	SOX2.p2	AF092136|C11orf67|28971|chromosome 11 open reading frame 67	AK024688|C11orf67|28971|chromosome 11 open reading frame 67	BC002752|C11orf67|28971|chromosome 11 open reading frame 67	NM_024684|C11orf67|28971|chromosome 11 open reading frame 67
hg19_v1_chr5_-_33892292_33892298	0.0536463	SOX2.p2	AJ250725|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12
hg19_v1_chr13_-_61989209_61989297	0.0534627	SOX2.p2	AK314607|PCDH20|64881|protocadherin 20	BC027907|PCDH20|64881|protocadherin 20	AF169693|PCDH20|64881|protocadherin 20	AK094680|PCDH20|64881|protocadherin 20
hg19_v1_chr6_+_90276556_90276694	0.0533129	SOX2.p2	NM_001242814|ANKRD6|22881|ankyrin repeat domain 6	AK096867|ANKRD6|22881|ankyrin repeat domain 6
hg19_v1_chr19_+_45971249_45971290	0.0532995	SOX2.p2	EU178109|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	EU178110|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	EU178111|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	EU178112|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	EU178113|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	EU178114|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	EU178115|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	EU178116|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	L49169|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	NM_001114171|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	NM_006732|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	AK225070|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	BC036724|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B	BC063042|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B
hg19_v1_chr12_-_99548471_99548644	0.0532423	SOX2.p2	BC026313|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	AF164792|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	BC142669|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	BC150204|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	AK289768|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001204068|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001204069|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001204070|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_020140|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_181670|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	BC068451|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001204066|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B
hg19_v1_chr1_+_218518675_218518747	0.0531973	SOX2.p2	NM_001135599|TGFB2|7042|transforming growth factor, beta 2	NM_003238|TGFB2|7042|transforming growth factor, beta 2	AB209842|TGFB2|7042|transforming growth factor, beta 2
hg19_v1_chr6_+_42123143_42123183	0.0529586	SOX2.p2	AK313865|GUCA1A|2978|guanylate cyclase activator 1A (retina)	NM_000409|GUCA1A|2978|guanylate cyclase activator 1A (retina)	BC031663|GUCA1A|2978|guanylate cyclase activator 1A (retina)	AK125780|GUCA1A|2978|guanylate cyclase activator 1A (retina)
hg19_v1_chr18_+_21719447_21719450	0.052913	SOX2.p2	NM_138644|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated	AF295037|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated
hg19_v1_chr19_+_48972574_48972764	0.0528641	SOX2.p2	AB209573|CYTH2|9266|cytohesin 2	BC038713|CYTH2|9266|cytohesin 2	AK292405|CYTH2|9266|cytohesin 2	U70728|CYTH2|9266|cytohesin 2	AK299590|CYTH2|9266|cytohesin 2	BC004361|CYTH2|9266|cytohesin 2	DQ892565|CYTH2|9266|cytohesin 2	DQ896856|CYTH2|9266|cytohesin 2	X99753|CYTH2|9266|cytohesin 2
hg19_v1_chr1_-_221910801_221910801	0.0528074	SOX2.p2	NM_144728|DUSP10|11221|dual specificity phosphatase 10
hg19_v1_chr10_+_134210691_134210727	0.0526073	SOX2.p2	NM_001098637|PWWP2B|170394|PWWP domain containing 2B	NM_138499|PWWP2B|170394|PWWP domain containing 2B	BC068574|PWWP2B|170394|PWWP domain containing 2B
hg19_v1_chr8_-_124553253_124553447	0.0525136	SOX2.p2	AY059629|FBXO32|114907|F-box protein 32	AJ420108|FBXO32|114907|F-box protein 32	AK056986|FBXO32|114907|F-box protein 32	EF143260|FBXO32|114907|F-box protein 32
hg19_v1_chr14_+_21152335_21152371	0.052448	SOX2.p2	FJ236304|ANG|283|angiogenin, ribonuclease, RNase A family, 5	NM_001145|ANG|283|angiogenin, ribonuclease, RNase A family, 5	AK092422|RNASE4|6038|ribonuclease, RNase A family, 4	NM_002937|RNASE4|6038|ribonuclease, RNase A family, 4
hg19_v1_chr8_-_124553448_124553514	0.0520946	SOX2.p2	NM_001242463|FBXO32|114907|F-box protein 32	NM_058229|FBXO32|114907|F-box protein 32
hg19_v1_chr10_+_52750930_52750951	0.0519727	SOX2.p2	AK300110|PRKG1|5592|protein kinase, cGMP-dependent, type I
hg19_v1_chr1_-_200992510_200992598	0.0517727	SOX2.p2	AM177180|KIF21B|23046|kinesin family member 21B	BC137281|KIF21B|23046|kinesin family member 21B	BC144557|KIF21B|23046|kinesin family member 21B
hg19_v1_chr5_-_95018659_95018713	0.051763	SOX2.p2	AY027526|SPATA9|83890|spermatogenesis associated 9	AK292338|SPATA9|83890|spermatogenesis associated 9	AK310260|SPATA9|83890|spermatogenesis associated 9	BC047333|SPATA9|83890|spermatogenesis associated 9	AK093225|SPATA9|83890|spermatogenesis associated 9	BC032832|SPATA9|83890|spermatogenesis associated 9	NM_031952|SPATA9|83890|spermatogenesis associated 9
hg19_v1_chr1_-_232651227_232651311	0.0517571	SOX2.p2	BC006013|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2	NM_020808|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2	AY168879|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2
hg19_v1_chr16_-_89350748_89351165	0.0517423	SOX2.p2	BC041585|ANKRD11|29123|ankyrin repeat domain 11
hg19_v1_chr11_+_6220375_6220453	0.0515993	SOX2.p2	BC137225|OR52W1|120787|olfactory receptor, family 52, subfamily W, member 1	NM_001005178|OR52W1|120787|olfactory receptor, family 52, subfamily W, member 1
hg19_v1_chrX_-_138914384_138914446	0.0515223	SOX2.p2	BC132728|ATP11C|286410|ATPase, class VI, type 11C	BC132730|ATP11C|286410|ATPase, class VI, type 11C	AJ580093|ATP11C|286410|ATPase, class VI, type 11C	AJ580094|ATP11C|286410|ATPase, class VI, type 11C	NM_001010986|ATP11C|286410|ATPase, class VI, type 11C	NM_173694|ATP11C|286410|ATPase, class VI, type 11C
hg19_v1_chr11_-_83984230_83984322	0.0514355	SOX2.p2	AK294375|DLG2|1740|discs, large homolog 2 (Drosophila)	AK126776|DLG2|1740|discs, large homolog 2 (Drosophila)	AK295624|DLG2|1740|discs, large homolog 2 (Drosophila)	NM_001142700|DLG2|1740|discs, large homolog 2 (Drosophila)
hg19_v1_chr6_+_100054649_100054649	0.0514339	SOX2.p2	AY004253|PRDM13|59336|PR domain containing 13	NM_021620|PRDM13|59336|PR domain containing 13
hg19_v1_chr7_-_141541220_141541284	0.0514271	SOX2.p2	AK172866|PRSS37|136242|protease, serine, 37	NM_001008270|PRSS37|136242|protease, serine, 37	NM_001171951|PRSS37|136242|protease, serine, 37	AK097648|PRSS37|136242|protease, serine, 37
hg19_v1_chr14_-_60097531_60097536	0.051281	SOX2.p2	AK290534|RTN1|6252|reticulon 1	NM_206852|RTN1|6252|reticulon 1
hg19_v1_chr13_-_74708361_74708431	0.0511463	SOX2.p2	AK291397|KLF12|11278|Kruppel-like factor 12
hg19_v1_chr16_-_28550227_28550317	0.0511278	SOX2.p2	BT006896|NUPR1|26471|nuclear protein, transcriptional regulator, 1	CR542144|NUPR1|26471|nuclear protein, transcriptional regulator, 1	BC002434|NUPR1|26471|nuclear protein, transcriptional regulator, 1	AK312135|NUPR1|26471|nuclear protein, transcriptional regulator, 1	AF135266|NUPR1|26471|nuclear protein, transcriptional regulator, 1
hg19_v1_chr22_-_23484208_23484279	0.0510729	SOX2.p2	BC008986|RTDR1|27156|rhabdoid tumor deletion region gene 1	AF133587|RTDR1|27156|rhabdoid tumor deletion region gene 1	NM_014433|RTDR1|27156|rhabdoid tumor deletion region gene 1	AK299530|RTDR1|27156|rhabdoid tumor deletion region gene 1	AK310327|RTDR1|27156|rhabdoid tumor deletion region gene 1
hg19_v1_chr12_-_50595303_50595315	0.0508433	SOX2.p2	AK023649|LIMA1|51474|LIM domain and actin binding 1	AF157325|LIMA1|51474|LIM domain and actin binding 1	NM_001243775|LIMA1|51474|LIM domain and actin binding 1
hg19_v1_chr15_-_64995346_64995374	0.0508033	SOX2.p2	BC119629|OAZ2|4947|ornithine decarboxylase antizyme 2	BC119630|OAZ2|4947|ornithine decarboxylase antizyme 2	BC148316|OAZ2|4947|ornithine decarboxylase antizyme 2	BC127630|OAZ2|4947|ornithine decarboxylase antizyme 2	BC127631|OAZ2|4947|ornithine decarboxylase antizyme 2	AF242520|OAZ2|4947|ornithine decarboxylase antizyme 2	AF242521|OAZ2|4947|ornithine decarboxylase antizyme 2
hg19_v1_chr14_+_32798478_32798595	0.0507597	SOX2.p2	NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6	U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6	AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6
hg19_v1_chr15_-_82338348_82338385	0.0507379	SOX2.p2	AK131424|MEX3B|84206|mex-3 homolog B (C. elegans)	NM_032246|MEX3B|84206|mex-3 homolog B (C. elegans)
hg19_v1_chr3_+_187943192_187943276	0.0505496	SOX2.p2	NM_001167671|LPP|4026|LIM domain containing preferred translocation partner in lipoma	BC130584|LPP|4026|LIM domain containing preferred translocation partner in lipoma	BC144076|LPP|4026|LIM domain containing preferred translocation partner in lipoma
hg19_v1_chr10_-_11574273_11574273	0.0504753	SOX2.p2	NM_001080491|USP6NL|9712|USP6 N-terminal like
hg19_v1_chr1_-_102462371_102462604	0.0504715	SOX2.p2	EU176509|OLFM3|118427|olfactomedin 3	AF397394|OLFM3|118427|olfactomedin 3	AF397395|OLFM3|118427|olfactomedin 3	AF397396|OLFM3|118427|olfactomedin 3	AF397397|OLFM3|118427|olfactomedin 3	BC022531|OLFM3|118427|olfactomedin 3	AK095724|OLFM3|118427|olfactomedin 3
hg19_v1_chr5_+_140501399_140501421	0.0502664	SOX2.p2	AK313640|PCDHB4|56131|protocadherin beta 4
hg19_v1_chr4_-_170191989_170192105	0.0502443	SOX2.p2	BC053671|SH3RF1|57630|SH3 domain containing ring finger 1
hg19_v1_chr4_-_53617781_53617806	0.0500837	SOX2.p2	NM_001242690|ERVMER34-1|100288413|endogenous retrovirus group MER34, member 1	NM_024534|ERVMER34-1|100288413|endogenous retrovirus group MER34, member 1
hg19_v1_chr1_-_51787881_51787937	0.0498907	SOX2.p2	BC028374|TTC39A|22996|tetratricopeptide repeat domain 39A	NM_001080494|TTC39A|22996|tetratricopeptide repeat domain 39A
hg19_v1_chr16_-_20702577_20702577	0.0497585	SOX2.p2	AB059429|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1	BC125177|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1	BC125178|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1	NM_052956|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1
hg19_v1_chrX_-_10535476_10535642	0.0497186	SOX2.p2	AF041210|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY539988|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY539994|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY540022|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY540023|MID1|4281|midline 1 (Opitz/BBB syndrome)	EU446510|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193278|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193279|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193280|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193281|MID1|4281|midline 1 (Opitz/BBB syndrome)
hg19_v1_chr3_-_58563070_58563149	0.0495656	SOX2.p2	AB023811|FAM107A|11170|family with sequence similarity 107, member A	BC010561|FAM107A|11170|family with sequence similarity 107, member A	AL050264|FAM107A|11170|family with sequence similarity 107, member A	AK055443|FAM107A|11170|family with sequence similarity 107, member A	AK128791|FAM107A|11170|family with sequence similarity 107, member A	BC093012|FAM107A|11170|family with sequence similarity 107, member A
hg19_v1_chr14_-_60097314_60097374	0.0494957	SOX2.p2	BC000314|RTN1|6252|reticulon 1	BC003003|RTN1|6252|reticulon 1	AK297492|RTN1|6252|reticulon 1
hg19_v1_chr8_+_102504836_102504985	0.0493464	SOX2.p2	AK023844|GRHL2|79977|grainyhead-like 2 (Drosophila)	AK292853|GRHL2|79977|grainyhead-like 2 (Drosophila)	BC069618|GRHL2|79977|grainyhead-like 2 (Drosophila)	BC069633|GRHL2|79977|grainyhead-like 2 (Drosophila)	BC069638|GRHL2|79977|grainyhead-like 2 (Drosophila)	BC129822|GRHL2|79977|grainyhead-like 2 (Drosophila)	BC129823|GRHL2|79977|grainyhead-like 2 (Drosophila)
hg19_v1_chr12_-_71148063_71148236	0.0493275	SOX2.p2	BC119777|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BC122866|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BC110900|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg19_v1_chr16_+_89988416_89988416	0.0492505	SOX2.p2	AK292219|TUBB3|10381|tubulin, beta 3 class III	NM_001197181|TUBB3|10381|tubulin, beta 3 class III
hg19_v1_chr16_-_73082169_73082273	0.0491774	SOX2.p2	L32832|ZFHX3|463|zinc finger homeobox 3	NM_006885|ZFHX3|463|zinc finger homeobox 3
hg19_v1_chr1_+_1266722_1266725	0.0491569	SOX2.p2	NM_152228|TAS1R3|83756|taste receptor, type 1, member 3
hg19_v1_chr5_+_15500539_15500549	0.0490276	SOX2.p2	BC136424|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg19_v1_chrX_-_100914816_100914862	0.0488429	SOX2.p2	BC052628|ARMCX2|9823|armadillo repeat containing, X-linked 2	AB011084|ARMCX2|9823|armadillo repeat containing, X-linked 2	BC012541|ARMCX2|9823|armadillo repeat containing, X-linked 2	BX648494|ARMCX2|9823|armadillo repeat containing, X-linked 2	AK291342|ARMCX2|9823|armadillo repeat containing, X-linked 2	NM_014782|ARMCX2|9823|armadillo repeat containing, X-linked 2	NM_177949|ARMCX2|9823|armadillo repeat containing, X-linked 2
hg19_v1_chr12_-_49504337_49504513	0.0487965	SOX2.p2	DQ892407|LMBR1L|55716|limb region 1 homolog (mouse)-like	DQ895619|LMBR1L|55716|limb region 1 homolog (mouse)-like	BC015015|LMBR1L|55716|limb region 1 homolog (mouse)-like	BC031550|LMBR1L|55716|limb region 1 homolog (mouse)-like	AB033000|LMBR1L|55716|limb region 1 homolog (mouse)-like	AK001356|LMBR1L|55716|limb region 1 homolog (mouse)-like
hg19_v1_chr6_+_123100645_123100753	0.0487838	SOX2.p2	NM_001446|FABP7|2173|fatty acid binding protein 7, brain	BC012299|FABP7|2173|fatty acid binding protein 7, brain
hg19_v1_chr17_-_41738901_41738930	0.0487628	SOX2.p2	EU446636|MEOX1|4222|mesenchyme homeobox 1	BC069474|MEOX1|4222|mesenchyme homeobox 1	BC069506|MEOX1|4222|mesenchyme homeobox 1	NM_004527|MEOX1|4222|mesenchyme homeobox 1	NM_013999|MEOX1|4222|mesenchyme homeobox 1	U10492|MEOX1|4222|mesenchyme homeobox 1	U10493|MEOX1|4222|mesenchyme homeobox 1
hg19_v1_chr4_-_184241926_184241926	0.0485694	SOX2.p2	NM_001111319|CLDN22|53842|claudin 22
hg19_v1_chr2_+_171571800_171571917	0.0484866	SOX2.p2	NM_001003845|SP5|389058|Sp5 transcription factor	AB096175|SP5|389058|Sp5 transcription factor
hg19_v1_chr6_+_17282294_17282294	0.0483398	SOX2.p2	NM_001143941|RBM24|221662|RNA binding motif protein 24
hg19_v1_chr5_-_39394423_39394520	0.048306	SOX2.p2	DQ891872|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	EU176643|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	AF188298|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	U39050|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg19_v1_chr8_-_145060594_145060634	0.0482768	SOX2.p2	AK027370|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	AK309251|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	BC030549|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	BC020378|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	AK222914|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	AK308657|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	NM_032789|PARP10|84875|poly (ADP-ribose) polymerase family, member 10
hg19_v1_chr12_-_11286842_11286842	0.0482167	SOX2.p2	NM_001097643|TAS2R30|259293|taste receptor, type 2, member 30
hg19_v1_chr18_-_21852189_21852195	0.0482114	SOX2.p2	AF274714|OSBPL1A|114876|oxysterol binding protein-like 1A	NM_018030|OSBPL1A|114876|oxysterol binding protein-like 1A
hg19_v1_chr8_+_26435920_26435934	0.0480912	SOX2.p2	NM_001244604|DPYSL2|1808|dihydropyrimidinase-like 2	AK299077|DPYSL2|1808|dihydropyrimidinase-like 2
hg19_v1_chr20_-_3762060_3762112	0.0479971	SOX2.p2	BC022476|SPEF1|25876|sperm flagellar 1	AL080154|SPEF1|25876|sperm flagellar 1	EF560745|SPEF1|25876|sperm flagellar 1	NM_015417|SPEF1|25876|sperm flagellar 1	AK313766|SPEF1|25876|sperm flagellar 1
hg19_v1_chr3_+_173116243_173116243	0.0479461	SOX2.p2	BC032555|NLGN1|22871|neuroligin 1	NM_014932|NLGN1|22871|neuroligin 1
hg19_v1_chr8_-_105601124_105601226	0.0479215	SOX2.p2	DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12	DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12	BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12	AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12	AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12	CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12	AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12
hg19_v1_chr9_+_116342939_116342939	0.0478044	SOX2.p2	AF006609|RGS3|5998|regulator of G-protein signaling 3	NM_021106|RGS3|5998|regulator of G-protein signaling 3
hg19_v1_chr17_+_68071386_68071475	0.0475934	SOX2.p2	BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v1_chr22_+_35777051_35777086	0.0475482	SOX2.p2	CR456505|HMOX1|3162|heme oxygenase (decycling) 1	NM_002133|HMOX1|3162|heme oxygenase (decycling) 1	X06985|HMOX1|3162|heme oxygenase (decycling) 1
hg19_v1_chr19_+_1026271_1026327	0.0474826	SOX2.p2	NM_004368|CNN2|1265|calponin 2	NM_201277|CNN2|1265|calponin 2
hg19_v1_chr11_-_78052925_78052925	0.0474756	SOX2.p2	AB011143|GAB2|9846|GRB2-associated binding protein 2	BC152459|GAB2|9846|GRB2-associated binding protein 2	NM_012296|GAB2|9846|GRB2-associated binding protein 2
hg19_v1_chr1_-_151689246_151689292	0.0472673	SOX2.p2	BC004145|CELF3|11189|CUGBP, Elav-like family member 3	BC052491|CELF3|11189|CUGBP, Elav-like family member 3	AY165003|CELF3|11189|CUGBP, Elav-like family member 3	NM_007185|CELF3|11189|CUGBP, Elav-like family member 3
hg19_v1_chr6_-_31633390_31633407	0.0471363	SOX2.p2	NM_001199240|GPANK1|7918|G patch domain and ankyrin repeats 1
hg19_v1_chr17_-_3571905_3571972	0.0471023	SOX2.p2	AF028823|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	NM_001204698|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	NM_014604|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3
hg19_v1_chr10_+_123754141_123754147	0.0470857	SOX2.p2	AL833304|TACC2|10579|transforming, acidic coiled-coil containing protein 2	AK094848|TACC2|10579|transforming, acidic coiled-coil containing protein 2
hg19_v1_chr2_+_207406815_207406857	0.047056	SOX2.p2	AK129906|ADAM23|8745|ADAM metallopeptidase domain 23
hg19_v1_chr20_+_44036628_44036628	0.0470231	SOX2.p2	NM_001048225|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2	NM_001048226|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2
hg19_v1_chr1_-_25747276_25747404	0.0470045	SOX2.p2	AB018644|RHCE|6006|Rh blood group, CcEe antigens	AB018645|RHCE|6006|Rh blood group, CcEe antigens	AB030388|RHCE|6006|Rh blood group, CcEe antigens	AB049753|RHCE|6006|Rh blood group, CcEe antigens	AF056965|RHCE|6006|Rh blood group, CcEe antigens	AF177938|RHD|6007|Rh blood group, D antigen	AM295498|RHCE|6006|Rh blood group, CcEe antigens	AM295506|RHCE|6006|Rh blood group, CcEe antigens	DQ178642|RHCE|6006|Rh blood group, CcEe antigens	DQ266353|RHCE|6006|Rh blood group, CcEe antigens	DQ266400|RHCE|6006|Rh blood group, CcEe antigens	DQ322275|RHCE|6006|Rh blood group, CcEe antigens	FR691748|RHCE|6006|Rh blood group, CcEe antigens	FR691750|RHCE|6006|Rh blood group, CcEe antigens	GU474431|RHCE|6006|Rh blood group, CcEe antigens	GU563377|RHCE|6006|Rh blood group, CcEe antigens	GU810838|RHCE|6006|Rh blood group, CcEe antigens	S57967|RHCE|6006|Rh blood group, CcEe antigens	X63096|RHCE|6006|Rh blood group, CcEe antigens	X63095|RHCE|6006|Rh blood group, CcEe antigens	AY603478|RHCE|6006|Rh blood group, CcEe antigens	X63098|RHCE|6006|Rh blood group, CcEe antigens	Z97026|RHD|6007|Rh blood group, D antigen	BC075081|RHCE|6006|Rh blood group, CcEe antigens	M34015|RHCE|6006|Rh blood group, CcEe antigens	AF510065|RHCE|6006|Rh blood group, CcEe antigens	AF510066|RHCE|6006|Rh blood group, CcEe antigens	AF510067|RHCE|6006|Rh blood group, CcEe antigens	AF510068|RHCE|6006|Rh blood group, CcEe antigens	X54534|RHCE|6006|Rh blood group, CcEe antigens	NM_020485|RHCE|6006|Rh blood group, CcEe antigens	NM_138616|RHCE|6006|Rh blood group, CcEe antigens	NM_138617|RHCE|6006|Rh blood group, CcEe antigens	NM_138618|RHCE|6006|Rh blood group, CcEe antigens	BC139905|RHCE|6006|Rh blood group, CcEe antigens
hg19_v1_chrX_+_100805415_100805588	0.0468181	SOX2.p2	AB039670|ARMCX1|51309|armadillo repeat containing, X-linked 1	NM_016608|ARMCX1|51309|armadillo repeat containing, X-linked 1	CR749609|ARMCX1|51309|armadillo repeat containing, X-linked 1	AK222578|ARMCX1|51309|armadillo repeat containing, X-linked 1	AK074785|ARMCX1|51309|armadillo repeat containing, X-linked 1	BC002691|ARMCX1|51309|armadillo repeat containing, X-linked 1	AF248963|ARMCX1|51309|armadillo repeat containing, X-linked 1
hg19_v1_chr9_+_103340335_103340443	0.0467655	SOX2.p2	NM_001018116|MURC|347273|muscle-related coiled-coil protein	AK300099|MURC|347273|muscle-related coiled-coil protein	EU487253|MURC|347273|muscle-related coiled-coil protein	BC090888|MURC|347273|muscle-related coiled-coil protein
hg19_v1_chr4_-_170192106_170192109	0.0467561	SOX2.p2	AK021429|SH3RF1|57630|SH3 domain containing ring finger 1
hg19_v1_chr2_+_189157551_189157612	0.0466816	SOX2.p2	BC068525|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	AF191771|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	AF200715|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	AF075014|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1
hg19_v1_chr1_+_65730423_65730436	0.0465723	SOX2.p2	AK296408|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6	NM_014787|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6	AB007942|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6
hg19_v1_chr12_-_49582296_49582473	0.0464816	SOX2.p2	AK289483|TUBA1A|7846|tubulin, alpha 1a
hg19_v1_chr9_-_74979625_74979825	0.0464617	SOX2.p2	AK025782|ZFAND5|7763|zinc finger, AN1-type domain 5	BC073131|ZFAND5|7763|zinc finger, AN1-type domain 5
hg19_v1_chr6_-_31632666_31633178	0.0462688	SOX2.p2	AJ420471|GPANK1|7918|G patch domain and ankyrin repeats 1	BC008783|GPANK1|7918|G patch domain and ankyrin repeats 1	BC018875|GPANK1|7918|G patch domain and ankyrin repeats 1	NM_033177|GPANK1|7918|G patch domain and ankyrin repeats 1
hg19_v1_chr12_+_49297892_49297953	0.0460515	SOX2.p2	NM_033124|CCDC65|85478|coiled-coil domain containing 65	AK302082|CCDC65|85478|coiled-coil domain containing 65	AK093051|CCDC65|85478|coiled-coil domain containing 65	AF382188|CCDC65|85478|coiled-coil domain containing 65	AK314623|CCDC65|85478|coiled-coil domain containing 65	BC039317|CCDC65|85478|coiled-coil domain containing 65
hg19_v1_chr17_+_36861398_36861800	0.0459554	SOX2.p2	BC064612|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
hg19_v1_chr3_-_149095413_149095452	0.0457868	SOX2.p2	BC008442|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr11_-_790103_790125	0.0456317	SOX2.p2	BC034732|CEND1|51286|cell cycle exit and neuronal differentiation 1	AK074547|CEND1|51286|cell cycle exit and neuronal differentiation 1	AK312993|CEND1|51286|cell cycle exit and neuronal differentiation 1	NM_016564|CEND1|51286|cell cycle exit and neuronal differentiation 1
hg19_v1_chr5_-_146833150_146833380	0.0456269	SOX2.p2	EU832180|DPYSL3|1809|dihydropyrimidinase-like 3	EU832273|DPYSL3|1809|dihydropyrimidinase-like 3	BC039006|DPYSL3|1809|dihydropyrimidinase-like 3	D78014|DPYSL3|1809|dihydropyrimidinase-like 3	AK297223|DPYSL3|1809|dihydropyrimidinase-like 3	NM_001387|DPYSL3|1809|dihydropyrimidinase-like 3	Y07818|DPYSL3|1809|dihydropyrimidinase-like 3
hg19_v1_chr17_+_64960754_64961025	0.0455342	SOX2.p2	NM_014405|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4	AF162692|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4	AK315149|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4	DQ891815|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4	DQ895000|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4	BC034532|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4
hg19_v1_chr12_-_71148331_71148370	0.0454486	SOX2.p2	X82635|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	U77917|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BC072386|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg19_v1_chr1_+_161129229_161129287	0.0454015	SOX2.p2	NM_001014443|USP21|27005|ubiquitin specific peptidase 21	NM_012475|USP21|27005|ubiquitin specific peptidase 21	AB208899|USP21|27005|ubiquitin specific peptidase 21
hg19_v1_chr16_+_58534045_58534152	0.0453851	SOX2.p2	AK055038|NDRG4|65009|NDRG family member 4	AB044944|NDRG4|65009|NDRG family member 4	AB044945|NDRG4|65009|NDRG family member 4	AK131248|NDRG4|65009|NDRG family member 4	AK296415|NDRG4|65009|NDRG family member 4	AK299949|NDRG4|65009|NDRG family member 4	AK316089|NDRG4|65009|NDRG family member 4	NM_001242833|NDRG4|65009|NDRG family member 4	NM_001242834|NDRG4|65009|NDRG family member 4	NM_001242835|NDRG4|65009|NDRG family member 4	NM_001242836|NDRG4|65009|NDRG family member 4	BC011795|NDRG4|65009|NDRG family member 4	AB033006|NDRG4|65009|NDRG family member 4	AL136584|NDRG4|65009|NDRG family member 4	BC001527|NDRG4|65009|NDRG family member 4	AM393094|NDRG4|65009|NDRG family member 4	AM393323|NDRG4|65009|NDRG family member 4
hg19_v1_chr4_-_120549827_120549980	0.0453802	SOX2.p2	AM393036|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AM393270|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AM393448|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AK290189|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	BC126233|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AJ004865|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AF155192|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AF043731|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	NM_001083|PDE5A|8654|phosphodiesterase 5A, cGMP-specific
hg19_v1_chr11_+_118992232_118992335	0.0453762	SOX2.p2	NM_001243259|HINFP|25988|histone H4 transcription factor	NM_015517|HINFP|25988|histone H4 transcription factor	NM_198971|HINFP|25988|histone H4 transcription factor	AK300288|HINFP|25988|histone H4 transcription factor	BC017234|HINFP|25988|histone H4 transcription factor	AK056362|HINFP|25988|histone H4 transcription factor	BC012856|HINFP|25988|histone H4 transcription factor	AK301452|HINFP|25988|histone H4 transcription factor
hg19_v1_chr3_-_151987332_151987359	0.0453447	SOX2.p2	AK304857|LOC401093|401093|uncharacterized LOC401093	AK316515|LOC401093|401093|uncharacterized LOC401093
hg19_v1_chr5_-_176037091_176037183	0.0453009	SOX2.p2	BC052950|GPRIN1|114787|G protein regulated inducer of neurite outgrowth 1	NM_052899|GPRIN1|114787|G protein regulated inducer of neurite outgrowth 1	AB067480|GPRIN1|114787|G protein regulated inducer of neurite outgrowth 1
hg19_v1_chr19_+_751108_751151	0.0452813	SOX2.p2	BC052236|C19orf21|126353|chromosome 19 open reading frame 21	BX648389|C19orf21|126353|chromosome 19 open reading frame 21	BC042125|C19orf21|126353|chromosome 19 open reading frame 21	NM_173481|C19orf21|126353|chromosome 19 open reading frame 21
hg19_v1_chr14_-_35344450_35344488	0.0452348	SOX2.p2	AF086397|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A	AF213467|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg19_v1_chr13_-_74707913_74708065	0.0452147	SOX2.p2	AF161471|KLF12|11278|Kruppel-like factor 12	AF113122|KLF12|11278|Kruppel-like factor 12	NM_007249|KLF12|11278|Kruppel-like factor 12
hg19_v1_chr11_+_20049128_20049136	0.0451913	SOX2.p2	AK307574|NAV2|89797|neuron navigator 2
hg19_v1_chr4_+_72102249_72102324	0.0450782	SOX2.p2	AF069510|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AB470072|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF053753|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF053754|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF310248|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	EF531618|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4
hg19_v1_chr3_-_97754147_97754147	0.0450752	SOX2.p2	CR749263|GABRR3|200959|gamma-aminobutyric acid (GABA) receptor, rho 3	NM_001105580|GABRR3|200959|gamma-aminobutyric acid (GABA) receptor, rho 3
hg19_v1_chr2_-_60780404_60780641	0.0450553	SOX2.p2	AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)
hg19_v1_chr10_-_28591844_28592020	0.0450484	SOX2.p2	AK315046|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)	AK301592|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
hg19_v1_chr2_-_238499317_238499375	0.045042	SOX2.p2	BC009827|RAB17|64284|RAB17, member RAS oncogene family	BC050426|RAB17|64284|RAB17, member RAS oncogene family	AL136645|RAB17|64284|RAB17, member RAS oncogene family
hg19_v1_chr1_-_202113855_202113866	0.0450343	SOX2.p2	NM_138795|ARL8A|127829|ADP-ribosylation factor-like 8A
hg19_v1_chr6_-_134373618_134373788	0.0450259	SOX2.p2	AK226098|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	BC070149|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	AY046419|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	AL833602|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	AK122628|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	BX648889|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	NM_145176|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12
hg19_v1_chr3_-_155394104_155394204	0.0449982	SOX2.p2	NM_001130960|PLCH1|23007|phospholipase C, eta 1	NM_001130961|PLCH1|23007|phospholipase C, eta 1	AK096620|PLCH1|23007|phospholipase C, eta 1
hg19_v1_chr9_+_116263706_116263856	0.0449412	SOX2.p2	AF463495|RGS3|5998|regulator of G-protein signaling 3	NM_130795|RGS3|5998|regulator of G-protein signaling 3	AK096840|RGS3|5998|regulator of G-protein signaling 3	BC042555|RGS3|5998|regulator of G-protein signaling 3	AF490840|RGS3|5998|regulator of G-protein signaling 3
hg19_v1_chr12_-_21810720_21810732	0.0448453	SOX2.p2	BC071860|LDHB|3945|lactate dehydrogenase B	NM_001174097|LDHB|3945|lactate dehydrogenase B	Y00711|LDHB|3945|lactate dehydrogenase B
hg19_v1_chr3_-_99833348_99833356	0.0446977	SOX2.p2	BC017987|FILIP1L|11259|filamin A interacting protein 1-like	NM_001042459|FILIP1L|11259|filamin A interacting protein 1-like	NM_182909|FILIP1L|11259|filamin A interacting protein 1-like	AF329092|FILIP1L|11259|filamin A interacting protein 1-like	AX776292|FILIP1L|11259|filamin A interacting protein 1-like
hg19_v1_chr5_+_176875325_176875334	0.0446064	SOX2.p2	NM_001174102|PRR7|80758|proline rich 7 (synaptic)	BC021240|PRR7|80758|proline rich 7 (synaptic)
hg19_v1_chr10_+_97759847_97759882	0.0446	SOX2.p2	NM_001001732|CC2D2B|387707|coiled-coil and C2 domain containing 2B	NM_001159747|CC2D2B|387707|coiled-coil and C2 domain containing 2B	AK302377|CC2D2B|387707|coiled-coil and C2 domain containing 2B	BC075861|CC2D2B|387707|coiled-coil and C2 domain containing 2B
hg19_v1_chr2_+_71205574_71205574	0.0445432	SOX2.p2	BC035234|ANKRD53|79998|ankyrin repeat domain 53	NM_001115116|ANKRD53|79998|ankyrin repeat domain 53	NM_024933|ANKRD53|79998|ankyrin repeat domain 53
hg19_v1_chr11_+_10482677_10482686	0.0444214	SOX2.p2	NM_001172430|AMPD3|272|adenosine monophosphate deaminase 3	AK302970|AMPD3|272|adenosine monophosphate deaminase 3
hg19_v1_chr15_-_41166336_41166558	0.0442912	SOX2.p2	AY059636|RHOV|171177|ras homolog gene family, member V	BC112945|RHOV|171177|ras homolog gene family, member V	BC019353|RHOV|171177|ras homolog gene family, member V	BC105020|RHOV|171177|ras homolog gene family, member V	BC105022|RHOV|171177|ras homolog gene family, member V	AB079131|RHOV|171177|ras homolog gene family, member V	NM_133639|RHOV|171177|ras homolog gene family, member V
hg19_v1_chr22_+_31795538_31795576	0.0442359	SOX2.p2	NM_004147|DRG1|4733|developmentally regulated GTP binding protein 1
hg19_v1_chr19_+_42806249_42806283	0.0441945	SOX2.p2	BC063021|PRR19|284338|proline rich 19	AK291528|PRR19|284338|proline rich 19	NM_199285|PRR19|284338|proline rich 19
hg19_v1_chr18_-_74729049_74729086	0.0441792	SOX2.p2	AK314553|MBP|4155|myelin basic protein	NM_001025081|MBP|4155|myelin basic protein	NM_001025090|MBP|4155|myelin basic protein	NM_001025092|MBP|4155|myelin basic protein	NM_002385|MBP|4155|myelin basic protein	AK293922|MBP|4155|myelin basic protein
hg19_v1_chr4_-_164534656_164534775	0.0441761	SOX2.p2	AK000675|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	AK301408|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	NM_017923|MARCH1|55016|membrane-associated ring finger (C3HC4) 1
hg19_v1_chr2_+_36583369_36583435	0.0441256	SOX2.p2	AB209139|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)	NM_016441|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)	AF167706|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)	BC111989|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)	BC113371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)
hg19_v1_chr3_+_182970853_182971044	0.0440808	SOX2.p2	NM_032047|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	AK074424|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg19_v1_chr10_+_70980058_70980104	0.0440293	SOX2.p2	AK095086|HKDC1|80201|hexokinase domain containing 1	NM_025130|HKDC1|80201|hexokinase domain containing 1	BC110505|HKDC1|80201|hexokinase domain containing 1	BC110504|HKDC1|80201|hexokinase domain containing 1	AK291024|HKDC1|80201|hexokinase domain containing 1	BC069201|HKDC1|80201|hexokinase domain containing 1
hg19_v1_chr2_+_228678556_228678627	0.0439963	SOX2.p2	BC020698|CCL20|6364|chemokine (C-C motif) ligand 20	NM_001130046|CCL20|6364|chemokine (C-C motif) ligand 20	NM_004591|CCL20|6364|chemokine (C-C motif) ligand 20	D86955|CCL20|6364|chemokine (C-C motif) ligand 20	U64197|CCL20|6364|chemokine (C-C motif) ligand 20	DQ891973|CCL20|6364|chemokine (C-C motif) ligand 20	DQ896841|CCL20|6364|chemokine (C-C motif) ligand 20	U77035|CCL20|6364|chemokine (C-C motif) ligand 20
hg19_v1_chr1_+_16085245_16085309	0.0439732	SOX2.p2	NM_017556|FBLIM1|54751|filamin binding LIM protein 1
hg19_v1_chr6_+_149068148_149068270	0.0439547	SOX2.p2	NM_005715|UST|10090|uronyl-2-sulfotransferase
hg19_v1_chr13_-_33780142_33780186	0.0438754	SOX2.p2	AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13
hg19_v1_chr1_-_167522979_167523003	0.0438723	SOX2.p2	DQ891131|CREG1|8804|cellular repressor of E1A-stimulated genes 1	DQ894310|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AY359071|CREG1|8804|cellular repressor of E1A-stimulated genes 1	BC006786|CREG1|8804|cellular repressor of E1A-stimulated genes 1	BC008628|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AK130006|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AK315497|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AK075375|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AK095456|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AF084523|CREG1|8804|cellular repressor of E1A-stimulated genes 1
hg19_v1_chr11_+_126081618_126081707	0.0438528	SOX2.p2	NM_024556|FAM118B|79607|family with sequence similarity 118, member B	AK315615|FAM118B|79607|family with sequence similarity 118, member B	AK024756|FAM118B|79607|family with sequence similarity 118, member B	AK225081|FAM118B|79607|family with sequence similarity 118, member B	BC001647|FAM118B|79607|family with sequence similarity 118, member B
hg19_v1_chr1_-_201476218_201476240	0.0438203	SOX2.p2	BC007492|CSRP1|1465|cysteine and glycine-rich protein 1	M33146|CSRP1|1465|cysteine and glycine-rich protein 1	BC032493|CSRP1|1465|cysteine and glycine-rich protein 1
hg19_v1_chr21_+_26934440_26934504	0.0438009	SOX2.p2	AF402776|MIR155HG|114614|MIR155 host gene (non-protein coding)
hg19_v1_chr14_+_70918873_70918873	0.0437569	SOX2.p2	NM_003813|ADAM21|8747|ADAM metallopeptidase domain 21
hg19_v1_chr1_-_156051788_156051809	0.0437007	SOX2.p2	AY950677|MEX3A|92312|mex-3 homolog A (C. elegans)	NM_001093725|MEX3A|92312|mex-3 homolog A (C. elegans)
hg19_v1_chr10_-_14646407_14646451	0.0436557	SOX2.p2	BC072452|FAM107B|83641|family with sequence similarity 107, member B
hg19_v1_chr14_-_81405883_81405883	0.043507	SOX2.p2	NM_152446|CEP128|145508|centrosomal protein 128kDa
hg19_v1_chr1_+_104097321_104097321	0.0434997	SOX2.p2	NM_020978|AMY2B|280|amylase, alpha 2B (pancreatic)
hg19_v1_chr2_-_24307179_24307212	0.0433508	SOX2.p2	AY371700|TP53I3|9540|tumor protein p53 inducible protein 3	BT007149|TP53I3|9540|tumor protein p53 inducible protein 3	NM_001206802|TP53I3|9540|tumor protein p53 inducible protein 3
hg19_v1_chr1_-_53793583_53793742	0.0432811	SOX2.p2	Z75190|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	D50678|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	BC051836|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
hg19_v1_chr15_+_51973549_51973713	0.0432047	SOX2.p2	AF453583|SCG3|29106|secretogranin III	NM_001165257|SCG3|29106|secretogranin III	NM_013243|SCG3|29106|secretogranin III	AF078851|SCG3|29106|secretogranin III	AY359093|SCG3|29106|secretogranin III	AK075314|SCG3|29106|secretogranin III	AK296466|SCG3|29106|secretogranin III	AK290175|SCG3|29106|secretogranin III
hg19_v1_chr4_+_25657434_25657486	0.0431981	SOX2.p2	NM_001177998|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2	NM_006424|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2	AK292675|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2	AF111856|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2	AK075046|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2	AF146796|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2	BC142704|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2	BC146666|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2
hg19_v1_chr2_-_55199894_55199922	0.0430906	SOX2.p2	
hg19_v1_chr1_-_243418482_243418662	0.0430626	SOX2.p2	AK310003|CEP170|9859|centrosomal protein 170kDa	BC050722|CEP170|9859|centrosomal protein 170kDa
hg19_v1_chr5_+_140235594_140235633	0.043044	SOX2.p2	BC130447|PCDHA10|56139|protocadherin alpha 10	AF152306|PCDHA10|56139|protocadherin alpha 10	AF152475|PCDHA10|56139|protocadherin alpha 10	AF169689|PCDHA10|56139|protocadherin alpha 10	HQ258585|PCDHA10|56139|protocadherin alpha 10	NM_018901|PCDHA10|56139|protocadherin alpha 10	NM_031859|PCDHA10|56139|protocadherin alpha 10	NM_031860|PCDHA10|56139|protocadherin alpha 10
hg19_v1_chr4_+_84457390_84457772	0.0429156	SOX2.p2	DQ345298|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9	BC090956|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9	AY358100|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9	NM_032717|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9	DQ324782|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9
hg19_v1_chr10_+_73723992_73724122	0.0428693	SOX2.p2	AB017915|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3	NM_004273|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3	AB012192|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3
hg19_v1_chr1_-_202612580_202612580	0.0428338	SOX2.p2	AK094430|SYT2|127833|synaptotagmin II	NM_001136504|SYT2|127833|synaptotagmin II
hg19_v1_chr5_+_138677570_138677617	0.0427583	SOX2.p2	AF317675|PAIP2|51247|poly(A) binding protein interacting protein 2
hg19_v1_chr3_-_109035239_109035363	0.0427344	SOX2.p2	BC018070|DPPA2|151871|developmental pluripotency associated 2	AY283672|DPPA2|151871|developmental pluripotency associated 2	NM_138815|DPPA2|151871|developmental pluripotency associated 2
hg19_v1_chr8_+_21924369_21924386	0.0425916	SOX2.p2	DQ892779|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)	DQ896026|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)	EU832675|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)	EU832755|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)	BT007396|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)
hg19_v1_chr19_+_44100543_44100543	0.0423401	SOX2.p2	AK026353|ZNF576|79177|zinc finger protein 576	NM_024327|ZNF576|79177|zinc finger protein 576
hg19_v1_chr6_+_31783314_31783357	0.0422122	SOX2.p2	AK096017|HSPA1A|3303|heat shock 70kDa protein 1A	AK225692|HSPA1A|3303|heat shock 70kDa protein 1A	AK225699|HSPA1A|3303|heat shock 70kDa protein 1A	AK291295|HSPA1A|3303|heat shock 70kDa protein 1A	AK294182|HSPA1A|3303|heat shock 70kDa protein 1A	AK295398|HSPA1B|3304|heat shock 70kDa protein 1B	AK298056|HSPA1A|3303|heat shock 70kDa protein 1A	AK301574|HSPA1A|3303|heat shock 70kDa protein 1A	AK303980|HSPA1A|3303|heat shock 70kDa protein 1A	AK304618|HSPA1A|3303|heat shock 70kDa protein 1A	AK304652|HSPA1A|3303|heat shock 70kDa protein 1A	AK301243|HSPA1A|3303|heat shock 70kDa protein 1A	AB209818|HSPA1A|3303|heat shock 70kDa protein 1A	BC002453|HSPA1A|3303|heat shock 70kDa protein 1A
hg19_v1_chr15_-_82338459_82338494	0.0421482	SOX2.p2	AB095929|MEX3B|84206|mex-3 homolog B (C. elegans)	BC111545|MEX3B|84206|mex-3 homolog B (C. elegans)	BC036211|MEX3B|84206|mex-3 homolog B (C. elegans)
hg19_v1_chr19_-_50354906_50354968	0.0418874	SOX2.p2	BC043359|LOC100506033|100506033|uncharacterized LOC100506033
hg19_v1_chr7_+_150076405_150076449	0.0417479	SOX2.p2	NM_173680|ZNF775|285971|zinc finger protein 775	BC038111|ZNF775|285971|zinc finger protein 775
hg19_v1_chr15_-_50411405_50411527	0.0417461	SOX2.p2	BC144298|ATP8B4|79895|ATPase, class I, type 8B, member 4	BC144297|ATP8B4|79895|ATPase, class I, type 8B, member 4	NM_024837|ATP8B4|79895|ATPase, class I, type 8B, member 4
hg19_v1_chr3_-_116164363_116164384	0.04162	SOX2.p2	BC033803|LSAMP|4045|limbic system-associated membrane protein	NM_002338|LSAMP|4045|limbic system-associated membrane protein
hg19_v1_chr1_-_23886284_23886284	0.0415611	SOX2.p2	NM_002167|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	X69111|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
hg19_v1_chr7_-_105319608_105319608	0.0413794	SOX2.p2	AK300338|ATXN7L1|222255|ataxin 7-like 1	NM_138495|ATXN7L1|222255|ataxin 7-like 1
hg19_v1_chr7_+_97841565_97841618	0.041205	SOX2.p2	BC113394|BHLHA15|168620|basic helix-loop-helix family, member a15	BC113396|BHLHA15|168620|basic helix-loop-helix family, member a15	NM_177455|BHLHA15|168620|basic helix-loop-helix family, member a15
hg19_v1_chr5_-_64777703_64777746	0.0411934	SOX2.p2	AY692424|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6	NM_197941|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6	AY692422|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6
hg19_v1_chr5_+_140749830_140749961	0.041156	SOX2.p2	BC150172|PCDHGB3|56102|protocadherin gamma subfamily B, 3	AF152332|PCDHGB3|56102|protocadherin gamma subfamily B, 3	AF152519|PCDHGB3|56102|protocadherin gamma subfamily B, 3	NM_018924|PCDHGB3|56102|protocadherin gamma subfamily B, 3	NM_032097|PCDHGB3|56102|protocadherin gamma subfamily B, 3
hg19_v1_chr4_+_71587674_71587767	0.0410883	SOX2.p2	NM_001037442|RUFY3|22902|RUN and FYVE domain containing 3	NM_014961|RUFY3|22902|RUN and FYVE domain containing 3	BC051716|RUFY3|22902|RUN and FYVE domain containing 3	BC053837|RUFY3|22902|RUN and FYVE domain containing 3	BC098433|RUFY3|22902|RUN and FYVE domain containing 3	AB020678|RUFY3|22902|RUN and FYVE domain containing 3	BC071988|RUFY3|22902|RUN and FYVE domain containing 3
hg19_v1_chr4_-_5889992_5890000	0.0410537	SOX2.p2	BT006806|CRMP1|1400|collapsin response mediator protein 1	DQ892528|CRMP1|1400|collapsin response mediator protein 1	DQ895740|CRMP1|1400|collapsin response mediator protein 1
hg19_v1_chr2_+_208576446_208576555	0.0410288	SOX2.p2	BC067253|CCNYL1|151195|cyclin Y-like 1
hg19_v1_chr1_+_16010838_16011050	0.0409519	SOX2.p2	AB020649|PLEKHM2|23207|pleckstrin homology domain containing, family M (with RUN domain) member 2
hg19_v1_chr14_+_21152735_21152817	0.0409515	SOX2.p2	AK313989|ANG|283|angiogenin, ribonuclease, RNase A family, 5	BC015520|RNASE4|6038|ribonuclease, RNase A family, 4	BC054880|ANG|283|angiogenin, ribonuclease, RNase A family, 5	BX248010|RNASE4|6038|ribonuclease, RNase A family, 4
hg19_v1_chr22_+_38599026_38599026	0.0409344	SOX2.p2	NM_001161573|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)
hg19_v1_chr9_+_113431050_113431183	0.0408989	SOX2.p2	NM_001166280|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	NM_001166281|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	NM_005592|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	AF006464|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	BC109098|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	BC109099|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	EU832778|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	EU832779|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	GQ129313|MUSK|4593|muscle, skeletal, receptor tyrosine kinase
hg19_v1_chr15_+_59499021_59499084	0.0408421	SOX2.p2	AY642121|LDHAL6B|92483|lactate dehydrogenase A-like 6B	BC022034|LDHAL6B|92483|lactate dehydrogenase A-like 6B	AY009108|LDHAL6B|92483|lactate dehydrogenase A-like 6B	NM_033195|LDHAL6B|92483|lactate dehydrogenase A-like 6B	AK058192|LDHAL6B|92483|lactate dehydrogenase A-like 6B
hg19_v1_chr8_-_119964059_119964382	0.0407957	SOX2.p2	AB002146|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	DQ892264|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	DQ895466|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	AK223155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	AK308524|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	U94332|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	BC011023|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	BC030155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	NM_002546|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b
hg19_v1_chr6_+_31783280_31783306	0.040766	SOX2.p2	NM_005345|HSPA1A|3303|heat shock 70kDa protein 1A
hg19_v1_chr3_-_55521567_55521669	0.040599	SOX2.p2	AK090582|WNT5A|7474|wingless-type MMTV integration site family, member 5A
hg19_v1_chr10_-_99393175_99393343	0.0405397	SOX2.p2	AK289406|MORN4|118812|MORN repeat containing 4	DQ338435|MORN4|118812|MORN repeat containing 4	DQ338436|MORN4|118812|MORN repeat containing 4	AL834132|MORN4|118812|MORN repeat containing 4	BC022054|MORN4|118812|MORN repeat containing 4	BC093023|MORN4|118812|MORN repeat containing 4	AK098791|MORN4|118812|MORN repeat containing 4	AJ312050|MORN4|118812|MORN repeat containing 4	NM_178832|MORN4|118812|MORN repeat containing 4
hg19_v1_chr5_+_15500768_15500785	0.0404986	SOX2.p2	AF199356|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg19_v1_chr3_-_99594915_99595067	0.0403716	SOX2.p2	EU531865|FILIP1L|11259|filamin A interacting protein 1-like	EU531866|FILIP1L|11259|filamin A interacting protein 1-like	BC027860|FILIP1L|11259|filamin A interacting protein 1-like	AK225855|FILIP1L|11259|filamin A interacting protein 1-like	AK096195|FILIP1L|11259|filamin A interacting protein 1-like	NM_014890|FILIP1L|11259|filamin A interacting protein 1-like
hg19_v1_chr1_-_243418340_243418372	0.0403484	SOX2.p2	AK296812|CEP170|9859|centrosomal protein 170kDa	AK299552|CEP170|9859|centrosomal protein 170kDa
hg19_v1_chr19_-_42569921_42569956	0.0402463	SOX2.p2	S40369|GRIK5|2901|glutamate receptor, ionotropic, kainate 5	AJ249209|GRIK5|2901|glutamate receptor, ionotropic, kainate 5	BC131717|GRIK5|2901|glutamate receptor, ionotropic, kainate 5	NM_002088|GRIK5|2901|glutamate receptor, ionotropic, kainate 5
hg19_v1_chr6_-_10415217_10415334	0.0401533	SOX2.p2	FJ794945|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	M61156|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	M36711|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	X52611|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
hg19_v1_chr12_+_6881669_6881788	0.0401447	SOX2.p2	NM_002286|LAG3|3902|lymphocyte-activation gene 3	BC037962|LAG3|3902|lymphocyte-activation gene 3	BC052589|LAG3|3902|lymphocyte-activation gene 3	AK292104|LAG3|3902|lymphocyte-activation gene 3	X51985|LAG3|3902|lymphocyte-activation gene 3
hg19_v1_chr3_-_192445344_192445387	0.0400809	SOX2.p2	AK312513|FGF12|2257|fibroblast growth factor 12	BC022524|FGF12|2257|fibroblast growth factor 12	NM_004113|FGF12|2257|fibroblast growth factor 12
hg19_v1_chr1_+_68150858_68150962	0.0400465	SOX2.p2	AK314991|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	NM_001199741|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	NM_001199742|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	NM_001924|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	M60974|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	BC011757|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	DQ008445|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	EF581092|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	EF614238|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha
hg19_v1_chr1_-_53793743_53793820	0.0399918	SOX2.p2	NM_001018054|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_004631|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_017522|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_033300|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
hg19_v1_chr19_+_10654591_10654765	0.0399531	SOX2.p2	AK056210|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AK314712|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AK316454|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	BC068992|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AK223383|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	BC007639|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	NM_032885|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AJ312332|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)
hg19_v1_chr19_-_56988698_56988769	0.0398931	SOX2.p2	AK096513|ZNF667|63934|zinc finger protein 667	AK056508|ZNF667|63934|zinc finger protein 667	CR936605|ZNF667|63934|zinc finger protein 667	BX647401|ZNF667|63934|zinc finger protein 667	NM_022103|ZNF667|63934|zinc finger protein 667
hg19_v1_chr12_-_57873364_57873425	0.039809	SOX2.p2	AK092763|ARHGAP9|64333|Rho GTPase activating protein 9	NM_001080157|ARHGAP9|64333|Rho GTPase activating protein 9
hg19_v1_chr10_+_24755440_24755448	0.0398021	SOX2.p2	AK300422|KIAA1217|56243|KIAA1217
hg19_v1_chr14_+_37131116_37131134	0.0397957	SOX2.p2	AK313627|PAX9|5083|paired box 9	AB248958|PAX9|5083|paired box 9
hg19_v1_chr11_+_36616039_36616170	0.0397448	SOX2.p2	AK290833|C11orf74|119710|chromosome 11 open reading frame 74	DQ121386|C11orf74|119710|chromosome 11 open reading frame 74	AK095997|C11orf74|119710|chromosome 11 open reading frame 74	AK299642|C11orf74|119710|chromosome 11 open reading frame 74	BC009561|C11orf74|119710|chromosome 11 open reading frame 74	BC051031|C11orf74|119710|chromosome 11 open reading frame 74	NM_138787|C11orf74|119710|chromosome 11 open reading frame 74	AK302634|C11orf74|119710|chromosome 11 open reading frame 74
hg19_v1_chr1_-_204165542_204165620	0.0396963	SOX2.p2	AF218017|KISS1|3814|KiSS-1 metastasis-suppressor	BC022819|KISS1|3814|KiSS-1 metastasis-suppressor	AK291695|KISS1|3814|KiSS-1 metastasis-suppressor	NM_002256|KISS1|3814|KiSS-1 metastasis-suppressor
hg19_v1_chr15_-_79103571_79103930	0.0396547	SOX2.p2	AY327122|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	AF140675|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	BC061631|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	NM_014272|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	AK299844|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7
hg19_v1_chr20_+_62328002_62328021	0.0395942	SOX2.p2	NM_003823|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy	AF104419|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy	AY358279|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy	BC017065|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy
hg19_v1_chr17_-_1083008_1083130	0.039562	SOX2.p2	AK302682|ABR|29|active BCR-related gene	NM_021962|ABR|29|active BCR-related gene	U01147|ABR|29|active BCR-related gene
hg19_v1_chrX_+_135251454_135251454	0.0395553	SOX2.p2	AK122708|FHL1|2273|four and a half LIM domains 1	NM_001159704|FHL1|2273|four and a half LIM domains 1
hg19_v1_chr7_+_116660263_116660272	0.0392684	SOX2.p2	AK093212|ST7|7982|suppression of tumorigenicity 7
hg19_v1_chr5_+_138678130_138678198	0.0392564	SOX2.p2	BC048106|PAIP2|51247|poly(A) binding protein interacting protein 2	NM_001033112|PAIP2|51247|poly(A) binding protein interacting protein 2	BC062718|PAIP2|51247|poly(A) binding protein interacting protein 2	BC039337|PAIP2|51247|poly(A) binding protein interacting protein 2
hg19_v1_chr5_-_157002705_157002728	0.0392065	SOX2.p2	
hg19_v1_chr1_+_185703470_185703682	0.039197	SOX2.p2	AF156100|HMCN1|83872|hemicentin 1	NM_031935|HMCN1|83872|hemicentin 1
hg19_v1_chr3_-_111314181_111314181	0.0391773	SOX2.p2	NM_024508|ZBED2|79413|zinc finger, BED-type containing 2
hg19_v1_chr10_+_24755459_24755479	0.0391506	SOX2.p2	BX640796|KIAA1217|56243|KIAA1217	BX648451|KIAA1217|56243|KIAA1217	BC098577|KIAA1217|56243|KIAA1217
hg19_v1_chr1_-_168105620_168105623	0.0390518	SOX2.p2	AK056040|GPR161|23432|G protein-coupled receptor 161	BC028163|GPR161|23432|G protein-coupled receptor 161	NM_153832|GPR161|23432|G protein-coupled receptor 161
hg19_v1_chr14_-_89020888_89021498	0.0389951	SOX2.p2	NM_007039|PTPN21|11099|protein tyrosine phosphatase, non-receptor type 21	X79510|PTPN21|11099|protein tyrosine phosphatase, non-receptor type 21
hg19_v1_chr7_-_83270746_83270746	0.0389898	SOX2.p2	AK303925|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	NM_001178129|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E
hg19_v1_chr3_-_112359547_112359558	0.0389634	SOX2.p2	BC086876|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr1_+_47901688_47901688	0.0389271	SOX2.p2	AF042832|FOXD2|2306|forkhead box D2	NM_004474|FOXD2|2306|forkhead box D2
hg19_v1_chr2_-_134326030_134326047	0.0388123	SOX2.p2	AK057980|NCKAP5|344148|NCK-associated protein 5	NM_207363|NCKAP5|344148|NCK-associated protein 5	NM_207481|NCKAP5|344148|NCK-associated protein 5
hg19_v1_chr6_-_47254143_47254220	0.0387092	SOX2.p2	AJ420531|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr12_-_45307710_45307710	0.038668	SOX2.p2	AK295125|NELL2|4753|NEL-like 2 (chicken)	NM_001145110|NELL2|4753|NEL-like 2 (chicken)
hg19_v1_chr17_+_77751929_77752033	0.0385742	SOX2.p2	NM_005189|CBX2|84733|chromobox homolog 2	NM_032647|CBX2|84733|chromobox homolog 2	BC004252|CBX2|84733|chromobox homolog 2	BC119759|CBX2|84733|chromobox homolog 2	BC119760|CBX2|84733|chromobox homolog 2	EU446542|CBX2|84733|chromobox homolog 2
hg19_v1_chr15_+_90544608_90544770	0.0385386	SOX2.p2	BC020301|ZNF710|374655|zinc finger protein 710	AK094712|ZNF710|374655|zinc finger protein 710	NM_198526|ZNF710|374655|zinc finger protein 710
hg19_v1_chr1_-_201390845_201390873	0.0384493	SOX2.p2	AJ315823|TNNI1|7135|troponin I type 1 (skeletal, slow)	BC012601|TNNI1|7135|troponin I type 1 (skeletal, slow)	AK223588|TNNI1|7135|troponin I type 1 (skeletal, slow)	J04760|TNNI1|7135|troponin I type 1 (skeletal, slow)	AK311896|TNNI1|7135|troponin I type 1 (skeletal, slow)	AL831820|TNNI1|7135|troponin I type 1 (skeletal, slow)	AL831975|TNNI1|7135|troponin I type 1 (skeletal, slow)	BC012600|TNNI1|7135|troponin I type 1 (skeletal, slow)	BX510903|TNNI1|7135|troponin I type 1 (skeletal, slow)	NM_003281|TNNI1|7135|troponin I type 1 (skeletal, slow)
hg19_v1_chr1_+_213123853_213123982	0.0384378	SOX2.p2	AK290973|VASH2|79805|vasohibin 2	NM_001136474|VASH2|79805|vasohibin 2	NM_001136475|VASH2|79805|vasohibin 2	NM_024749|VASH2|79805|vasohibin 2	AK022567|VASH2|79805|vasohibin 2	AK096605|VASH2|79805|vasohibin 2	BC053836|VASH2|79805|vasohibin 2	BC051856|VASH2|79805|vasohibin 2	BC028194|VASH2|79805|vasohibin 2
hg19_v1_chr18_+_7946885_7946928	0.0384316	SOX2.p2	AK294492|PTPRM|5797|protein tyrosine phosphatase, receptor type, M
hg19_v1_chr3_-_187871816_187871925	0.038309	SOX2.p2	BC042414|LPP-AS2|339929|LPP antisense RNA 2 (non-protein coding)
hg19_v1_chr6_-_49712055_49712167	0.0381856	SOX2.p2	BC069602|CRISP3|10321|cysteine-rich secretory protein 3	X95240|CRISP3|10321|cysteine-rich secretory protein 3	AK223380|CRISP3|10321|cysteine-rich secretory protein 3	X94323|CRISP3|10321|cysteine-rich secretory protein 3	AK303966|CRISP3|10321|cysteine-rich secretory protein 3	AK313387|CRISP3|10321|cysteine-rich secretory protein 3	AK292786|CRISP3|10321|cysteine-rich secretory protein 3	NM_001190986|CRISP3|10321|cysteine-rich secretory protein 3	NM_006061|CRISP3|10321|cysteine-rich secretory protein 3
hg19_v1_chr21_+_40177847_40177907	0.0381782	SOX2.p2	NM_005239|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)	BC042954|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)	AK315563|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)	BC017040|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)
hg19_v1_chr1_-_167523016_167523110	0.0381177	SOX2.p2	NM_003851|CREG1|8804|cellular repressor of E1A-stimulated genes 1
hg19_v1_chr7_-_27205148_27205160	0.0378443	SOX2.p2	NM_152739|HOXA9|3205|homeobox A9
hg19_v1_chr9_+_4839763_4839773	0.0378114	SOX2.p2	EF553527|RCL1|10171|RNA terminal phosphate cyclase-like 1
hg19_v1_chr2_-_170430312_170430423	0.0377394	SOX2.p2	AL832058|FASTKD1|79675|FAST kinase domains 1	AK074302|FASTKD1|79675|FAST kinase domains 1	BC017950|FASTKD1|79675|FAST kinase domains 1	AK055892|FASTKD1|79675|FAST kinase domains 1	AK130797|FASTKD1|79675|FAST kinase domains 1	BC035241|FASTKD1|79675|FAST kinase domains 1	NM_024622|FASTKD1|79675|FAST kinase domains 1
hg19_v1_chr1_+_16010816_16010831	0.0376137	SOX2.p2	BC040441|PLEKHM2|23207|pleckstrin homology domain containing, family M (with RUN domain) member 2	NM_015164|PLEKHM2|23207|pleckstrin homology domain containing, family M (with RUN domain) member 2
hg19_v1_chr10_-_14816895_14816895	0.0375471	SOX2.p2	AK127413|FAM107B|83641|family with sequence similarity 107, member B	NM_031453|FAM107B|83641|family with sequence similarity 107, member B
hg19_v1_chr9_-_4299915_4300011	0.0374777	SOX2.p2	DQ438877|GLIS3|169792|GLIS family zinc finger 3	DQ438881|GLIS3|169792|GLIS family zinc finger 3	DQ438886|GLIS3|169792|GLIS family zinc finger 3	DQ438891|GLIS3|169792|GLIS family zinc finger 3	DQ438898|GLIS3|169792|GLIS family zinc finger 3	DQ438901|GLIS3|169792|GLIS family zinc finger 3
hg19_v1_chr12_-_21810754_21810766	0.0373268	SOX2.p2	BC002362|LDHB|3945|lactate dehydrogenase B	AY189689|LDHB|3945|lactate dehydrogenase B
hg19_v1_chr7_+_139528951_139529234	0.0372239	SOX2.p2	NM_001061|TBXAS1|6916|thromboxane A synthase 1 (platelet)	NM_001166253|TBXAS1|6916|thromboxane A synthase 1 (platelet)	NM_030984|TBXAS1|6916|thromboxane A synthase 1 (platelet)	BC041157|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK296069|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK301164|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK303440|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK301049|TBXAS1|6916|thromboxane A synthase 1 (platelet)	M74055|TBXAS1|6916|thromboxane A synthase 1 (platelet)	S60133|TBXAS1|6916|thromboxane A synthase 1 (platelet)
hg19_v1_chr22_-_20104428_20104538	0.0372041	SOX2.p2	BC013352|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	BC108251|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	CR456354|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)
hg19_v1_chr19_+_9473695_9473695	0.037095	SOX2.p2	NM_003451|ZNF177|7730|zinc finger protein 177	U37263|ZNF177|7730|zinc finger protein 177
hg19_v1_chr7_-_108142934_108143010	0.0370862	SOX2.p2	BC005203|PNPLA8|50640|patatin-like phospholipase domain containing 8	AK002115|PNPLA8|50640|patatin-like phospholipase domain containing 8
hg19_v1_chr1_+_172502012_172502273	0.0370834	SOX2.p2	AK302949|C1orf9|51430|chromosome 1 open reading frame 9	AJ250075|C1orf9|51430|chromosome 1 open reading frame 9	NM_014283|C1orf9|51430|chromosome 1 open reading frame 9
hg19_v1_chr12_+_7045437_7045476	0.0370574	SOX2.p2	
hg19_v1_chr8_-_108510094_108510282	0.037021	SOX2.p2	U83508|ANGPT1|284|angiopoietin 1	BC152411|ANGPT1|284|angiopoietin 1	BC152419|ANGPT1|284|angiopoietin 1	D13628|ANGPT1|284|angiopoietin 1	AY055342|ANGPT1|284|angiopoietin 1	NM_001146|ANGPT1|284|angiopoietin 1	NM_001199859|ANGPT1|284|angiopoietin 1	BX648814|ANGPT1|284|angiopoietin 1
hg19_v1_chr3_-_55514933_55514955	0.0370209	SOX2.p2	BC074783|WNT5A|7474|wingless-type MMTV integration site family, member 5A
hg19_v1_chr7_+_23530136_23530198	0.0369937	SOX2.p2	BC026177|RPS2P32|256355|ribosomal protein S2 pseudogene 32
hg19_v1_chr14_+_76071804_76071804	0.0369928	SOX2.p2	AK297002|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2	NM_001195283|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2
hg19_v1_chr1_+_16090993_16091029	0.0369524	SOX2.p2	AF459643|FBLIM1|54751|filamin binding LIM protein 1	NM_001024215|FBLIM1|54751|filamin binding LIM protein 1	AK027444|FBLIM1|54751|filamin binding LIM protein 1
hg19_v1_chr7_-_106301329_106301678	0.0369508	SOX2.p2	AK093350|C7orf74|168455|chromosome 7 open reading frame 74	BC013906|C7orf74|168455|chromosome 7 open reading frame 74	NM_175884|C7orf74|168455|chromosome 7 open reading frame 74
hg19_v1_chr3_+_136537860_136537979	0.0368737	SOX2.p2	BC050423|TMEM22|80723|transmembrane protein 22	NM_001097599|TMEM22|80723|transmembrane protein 22	NM_001097600|TMEM22|80723|transmembrane protein 22	NM_025246|TMEM22|80723|transmembrane protein 22	BC022557|TMEM22|80723|transmembrane protein 22	AK314079|TMEM22|80723|transmembrane protein 22	BC000111|TMEM22|80723|transmembrane protein 22	AL136661|TMEM22|80723|transmembrane protein 22
hg19_v1_chr9_-_74979829_74980371	0.036815	SOX2.p2	AF062346|ZFAND5|7763|zinc finger, AN1-type domain 5	BC011018|ZFAND5|7763|zinc finger, AN1-type domain 5	BC027707|ZFAND5|7763|zinc finger, AN1-type domain 5	NM_001102420|ZFAND5|7763|zinc finger, AN1-type domain 5	NM_001102421|ZFAND5|7763|zinc finger, AN1-type domain 5	NM_006007|ZFAND5|7763|zinc finger, AN1-type domain 5
hg19_v1_chr9_+_36036900_36036994	0.0367657	SOX2.p2	AK292653|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	NM_021111|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	AK315073|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC050306|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC032240|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC060806|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC137093|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs
hg19_v1_chr16_-_30934437_30934589	0.0366866	SOX2.p2	BC101464|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)	BC101988|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)	BC105687|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)	BC105926|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)	AK092263|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)
hg19_v1_chr17_-_3867585_3867818	0.0366567	SOX2.p2	DQ893317|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	EU176809|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	Z69881|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	AF068220|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	BC035729|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	AK292716|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	NM_005173|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	NM_174953|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	NM_174954|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	NM_174955|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	NM_174956|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	NM_174957|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	NM_174958|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous
hg19_v1_chr12_+_12938540_12938614	0.0366278	SOX2.p2	BC126433|APOLD1|81575|apolipoprotein L domain containing 1	BC126435|APOLD1|81575|apolipoprotein L domain containing 1	NM_030817|APOLD1|81575|apolipoprotein L domain containing 1	AK225176|APOLD1|81575|apolipoprotein L domain containing 1	AK314392|APOLD1|81575|apolipoprotein L domain containing 1	AL136783|APOLD1|81575|apolipoprotein L domain containing 1
hg19_v1_chrX_-_112066353_112066353	0.0365913	SOX2.p2	AY987378|AMOT|154796|angiomotin	NM_001113490|AMOT|154796|angiomotin
hg19_v1_chr2_-_238499713_238499768	0.0365908	SOX2.p2	BC023661|RAB17|64284|RAB17, member RAS oncogene family	AK225423|RAB17|64284|RAB17, member RAS oncogene family	AK022600|RAB17|64284|RAB17, member RAS oncogene family	NM_022449|RAB17|64284|RAB17, member RAS oncogene family
hg19_v1_chr12_-_102874373_102874391	0.0365171	SOX2.p2	AB209184|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_000618|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111283|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111285|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg19_v1_chr1_+_161129288_161129402	0.0365128	SOX2.p2	BC090946|USP21|27005|ubiquitin specific peptidase 21	AK292319|USP21|27005|ubiquitin specific peptidase 21	AK310326|USP21|27005|ubiquitin specific peptidase 21	AF233442|USP21|27005|ubiquitin specific peptidase 21	AF217979|USP21|27005|ubiquitin specific peptidase 21	AF177758|USP21|27005|ubiquitin specific peptidase 21
hg19_v1_chr5_-_77806185_77806208	0.0364705	SOX2.p2	AK125227|LHFPL2|10184|lipoma HMGIC fusion partner-like 2
hg19_v1_chr6_-_32160637_32160715	0.0364603	SOX2.p2	AJ243938|GPSM3|63940|G-protein signaling modulator 3	AK313922|GPSM3|63940|G-protein signaling modulator 3
hg19_v1_chr3_-_169487602_169487682	0.036395	SOX2.p2	BC007289|ARPM1|84517|actin related protein M1	AK055346|ARPM1|84517|actin related protein M1	NM_032487|ARPM1|84517|actin related protein M1
hg19_v1_chr3_-_55521330_55521334	0.036384	SOX2.p2	BC064694|WNT5A|7474|wingless-type MMTV integration site family, member 5A	NM_003392|WNT5A|7474|wingless-type MMTV integration site family, member 5A	AK290375|WNT5A|7474|wingless-type MMTV integration site family, member 5A
hg19_v1_chr1_+_111413820_111413838	0.0363377	SOX2.p2	NM_001040033|CD53|963|CD53 molecule	BC035456|CD53|963|CD53 molecule
hg19_v1_chr16_-_3068161_3068187	0.0363082	SOX2.p2	BC008934|CLDN6|9074|claudin 6	AK075329|CLDN6|9074|claudin 6	NM_021195|CLDN6|9074|claudin 6
hg19_v1_chr1_+_40915773_40915827	0.036237	SOX2.p2	AK091612|ZNF643|65243|zinc finger protein 643	AL137241|ZNF643|65243|zinc finger protein 643
hg19_v1_chr17_+_4613931_4614025	0.036193	SOX2.p2	BC007427|ARRB2|409|arrestin, beta 2	BC067368|ARRB2|409|arrestin, beta 2	AF106941|ARRB2|409|arrestin, beta 2	CR749218|ARRB2|409|arrestin, beta 2	AB209786|ARRB2|409|arrestin, beta 2	AK290951|ARRB2|409|arrestin, beta 2	AK297181|ARRB2|409|arrestin, beta 2	BC095450|ARRB2|409|arrestin, beta 2	DQ893226|ARRB2|409|arrestin, beta 2	DQ896556|ARRB2|409|arrestin, beta 2	EU176778|ARRB2|409|arrestin, beta 2	CR450310|ARRB2|409|arrestin, beta 2	DQ664180|ARRB2|409|arrestin, beta 2	EU883572|ARRB2|409|arrestin, beta 2	Z11501|ARRB2|409|arrestin, beta 2	BC039066|ARRB2|409|arrestin, beta 2
hg19_v1_chr15_-_82336880_82336886	0.0361901	SOX2.p2	AK094145|MEX3B|84206|mex-3 homolog B (C. elegans)
hg19_v1_chr2_+_37571752_37571874	0.0361598	SOX2.p2	NM_012413|QPCT|25797|glutaminyl-peptide cyclotransferase	AK290605|QPCT|25797|glutaminyl-peptide cyclotransferase	BC015460|QPCT|25797|glutaminyl-peptide cyclotransferase	BC047756|QPCT|25797|glutaminyl-peptide cyclotransferase	BC020456|QPCT|25797|glutaminyl-peptide cyclotransferase	X71125|QPCT|25797|glutaminyl-peptide cyclotransferase	BC036721|QPCT|25797|glutaminyl-peptide cyclotransferase
hg19_v1_chr3_-_124930192_124930242	0.0360536	SOX2.p2	AF345197|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	HQ258349|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	BC126158|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	BC126160|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	AF390442|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	NM_001195483|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8
hg19_v1_chr13_-_99852925_99853010	0.0360417	SOX2.p2	BC043515|UBAC2-AS1|100289373|UBAC2 antisense RNA 1 (non-protein coding)	AK097488|UBAC2-AS1|100289373|UBAC2 antisense RNA 1 (non-protein coding)
hg19_v1_chr2_+_27070962_27071291	0.0359959	SOX2.p2	AF264015|DPYSL5|56896|dihydropyrimidinase-like 5	NM_020134|DPYSL5|56896|dihydropyrimidinase-like 5	BC002874|DPYSL5|56896|dihydropyrimidinase-like 5	NM_001253723|DPYSL5|56896|dihydropyrimidinase-like 5	NM_001253724|DPYSL5|56896|dihydropyrimidinase-like 5
hg19_v1_chr18_+_44497512_44497602	0.0359627	SOX2.p2	AK309134|KATNAL2|83473|katanin p60 subunit A-like 2
hg19_v1_chr13_-_48877796_48877822	0.0359602	SOX2.p2	
hg19_v1_chr12_-_122018100_122018418	0.0359527	SOX2.p2	AK127328|KDM2B|84678|lysine (K)-specific demethylase 2B	NM_001005366|KDM2B|84678|lysine (K)-specific demethylase 2B
hg19_v1_chr19_-_51014344_51014476	0.035915	SOX2.p2	AF247787|JOSD2|126119|Josephin domain containing 2	NM_138334|JOSD2|126119|Josephin domain containing 2	BC051380|JOSD2|126119|Josephin domain containing 2	BC062416|JOSD2|126119|Josephin domain containing 2	AK131052|JOSD2|126119|Josephin domain containing 2
hg19_v1_chr20_+_6748744_6748744	0.0357822	SOX2.p2	BC069214|BMP2|650|bone morphogenetic protein 2	NM_001200|BMP2|650|bone morphogenetic protein 2
hg19_v1_chr1_+_50574601_50574768	0.0357596	SOX2.p2	AY033997|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	BC036071|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	AY033998|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	M62843|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg19_v1_chr16_-_75529289_75529306	0.0356631	SOX2.p2	
hg19_v1_chr7_+_73703704_73703871	0.03561	SOX2.p2	AB006629|CLIP2|7461|CAP-GLY domain containing linker protein 2	BC150332|CLIP2|7461|CAP-GLY domain containing linker protein 2	NM_003388|CLIP2|7461|CAP-GLY domain containing linker protein 2	NM_032421|CLIP2|7461|CAP-GLY domain containing linker protein 2
hg19_v1_chr19_+_36132646_36132694	0.0355696	SOX2.p2	NM_014209|ETV2|2116|ets variant 2	AK097439|ETV2|2116|ets variant 2	BC040908|ETV2|2116|ets variant 2
hg19_v1_chr8_+_32579350_32579435	0.0354938	SOX2.p2	NM_001159996|NRG1|3084|neuregulin 1	AK293270|NRG1|3084|neuregulin 1	AK293240|NRG1|3084|neuregulin 1
hg19_v1_chr22_+_21821458_21821458	0.0354293	SOX2.p2	NM_001207052|TMEM191C|645426|transmembrane protein 191C
hg19_v1_chr10_+_18429605_18429809	0.0354064	SOX2.p2	NM_201593|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_201596|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_201597|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	S60415|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	BC136409|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AF137376|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AF423191|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AY393860|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AY675091|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK296471|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK311694|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK307526|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_001167945|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_201571|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_201572|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK293837|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit
hg19_v1_chr16_+_30389632_30389634	0.0352831	SOX2.p2	NM_001214906|ZNF48|197407|zinc finger protein 48	NM_001214907|ZNF48|197407|zinc finger protein 48
hg19_v1_chr1_-_208417635_208417664	0.0351173	SOX2.p2	NM_025179|PLXNA2|5362|plexin A2
hg19_v1_chr11_+_747424_747427	0.0351133	SOX2.p2	BC010103|TALDO1|6888|transaldolase 1	BC009680|TALDO1|6888|transaldolase 1
hg19_v1_chr16_+_58497628_58497648	0.0350888	SOX2.p2	AB021172|NDRG4|65009|NDRG family member 4
hg19_v1_chr14_+_74035762_74035788	0.0349208	SOX2.p2	AK001939|ACOT2|10965|acyl-CoA thioesterase 2	DQ082755|ACOT2|10965|acyl-CoA thioesterase 2	AK223635|ACOT2|10965|acyl-CoA thioesterase 2	NM_006821|ACOT2|10965|acyl-CoA thioesterase 2	BC006335|ACOT2|10965|acyl-CoA thioesterase 2
hg19_v1_chr17_-_38210888_38210888	0.0348524	SOX2.p2	NM_001079518|MED24|9862|mediator complex subunit 24	NM_014815|MED24|9862|mediator complex subunit 24
hg19_v1_chr17_-_56406120_56406151	0.0347734	SOX2.p2	AB014512|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1	BC150279|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1	NM_004758|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1	NM_024418|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1
hg19_v1_chr6_+_41040713_41040732	0.0347695	SOX2.p2	X59711|NFYA|4800|nuclear transcription factor Y, alpha
hg19_v1_chr4_-_54457628_54457659	0.0347491	SOX2.p2	BC022983|LNX1|84708|ligand of numb-protein X 1
hg19_v1_chr19_+_1026624_1026625	0.0347166	SOX2.p2	AK297774|CNN2|1265|calponin 2
hg19_v1_chr2_+_153191591_153191750	0.0347077	SOX2.p2	NM_052905|FMNL2|114793|formin-like 2
hg19_v1_chr9_-_36400817_36400977	0.0346376	SOX2.p2	AK093480|RNF38|152006|ring finger protein 38	AX748155|RNF38|152006|ring finger protein 38	AF394047|RNF38|152006|ring finger protein 38	NM_194328|RNF38|152006|ring finger protein 38	NM_194332|RNF38|152006|ring finger protein 38
hg19_v1_chr17_-_38210611_38210678	0.03455	SOX2.p2	EU392536|MED24|9862|mediator complex subunit 24	EU392541|MED24|9862|mediator complex subunit 24	D50920|MED24|9862|mediator complex subunit 24	AK022508|MED24|9862|mediator complex subunit 24	AK303502|MED24|9862|mediator complex subunit 24	AK303745|MED24|9862|mediator complex subunit 24	AK291040|MED24|9862|mediator complex subunit 24	AK293309|MED24|9862|mediator complex subunit 24	AK299864|MED24|9862|mediator complex subunit 24	AK300992|MED24|9862|mediator complex subunit 24
hg19_v1_chr11_+_93862143_93862159	0.0345221	SOX2.p2	AK074897|PANX1|24145|pannexin 1	AF093239|PANX1|24145|pannexin 1
hg19_v1_chr16_+_67143927_67144078	0.0345171	SOX2.p2	
hg19_v1_chr4_-_120550142_120550183	0.0344661	SOX2.p2	
hg19_v1_chr9_-_35748875_35749029	0.0344439	SOX2.p2	AK027884|GBA2|57704|glucosidase, beta (bile acid) 2	AL834306|GBA2|57704|glucosidase, beta (bile acid) 2
hg19_v1_chr11_-_35441501_35441609	0.0343984	SOX2.p2	U01824|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	AK122843|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	NM_001195728|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	NM_001252652|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v1_chr1_-_41625539_41625604	0.0343722	SOX2.p2	AK301497|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)	AK299383|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)	NM_001172222|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)
hg19_v1_chrX_-_110655384_110655459	0.0343268	SOX2.p2	AF040254|DCX|1641|doublecortin	AF040255|DCX|1641|doublecortin	BC027925|DCX|1641|doublecortin	AK290455|DCX|1641|doublecortin	AK299822|DCX|1641|doublecortin	NM_178151|DCX|1641|doublecortin	NM_001195553|DCX|1641|doublecortin	NM_178152|DCX|1641|doublecortin	NM_178153|DCX|1641|doublecortin
hg19_v1_chrX_-_15683153_15683153	0.034212	SOX2.p2	BC014317|TMEM27|57393|transmembrane protein 27	NM_020665|TMEM27|57393|transmembrane protein 27
hg19_v1_chr11_+_747428_747440	0.0341981	SOX2.p2	L19437|TALDO1|6888|transaldolase 1	NM_006755|TALDO1|6888|transaldolase 1
hg19_v1_chr13_-_33760215_33760215	0.0341399	SOX2.p2	AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_001243466|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13
hg19_v1_chr1_+_90098693_90098836	0.0339265	SOX2.p2	AK127881|LRRC8C|84230|leucine rich repeat containing 8 family, member C	AB081509|LRRC8C|84230|leucine rich repeat containing 8 family, member C	BC103929|LRRC8C|84230|leucine rich repeat containing 8 family, member C	BC113973|LRRC8C|84230|leucine rich repeat containing 8 family, member C
hg19_v1_chr1_-_27998719_27998759	0.0338462	SOX2.p2	NM_002038|IFI6|2537|interferon, alpha-inducible protein 6	NM_022872|IFI6|2537|interferon, alpha-inducible protein 6	NM_022873|IFI6|2537|interferon, alpha-inducible protein 6
hg19_v1_chr10_-_98592186_98592214	0.0338276	SOX2.p2	
hg19_v1_chr19_+_12949258_12949385	0.0338123	SOX2.p2	NM_014975|MAST1|22983|microtubule associated serine/threonine kinase 1	AB023190|MAST1|22983|microtubule associated serine/threonine kinase 1	AK297553|MAST1|22983|microtubule associated serine/threonine kinase 1
hg19_v1_chr7_+_129906702_129906727	0.0337951	SOX2.p2	BC007009|CPA2|1358|carboxypeptidase A2 (pancreatic)	NM_001869|CPA2|1358|carboxypeptidase A2 (pancreatic)	BC014571|CPA2|1358|carboxypeptidase A2 (pancreatic)	BC015140|CPA2|1358|carboxypeptidase A2 (pancreatic)	AK293378|CPA2|1358|carboxypeptidase A2 (pancreatic)	U19977|CPA2|1358|carboxypeptidase A2 (pancreatic)	DQ893811|CPA2|1358|carboxypeptidase A2 (pancreatic)	BT007403|CPA2|1358|carboxypeptidase A2 (pancreatic)
hg19_v1_chr1_+_201709051_201709079	0.0337455	SOX2.p2	BC069250|NAV1|89796|neuron navigator 1
hg19_v1_chr16_-_90085786_90086013	0.0337309	SOX2.p2	AK022644|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1	NM_001042610|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1
hg19_v1_chrX_+_100354797_100354797	0.0336447	SOX2.p2	NM_006733|CENPI|2491|centromere protein I	X97249|CENPI|2491|centromere protein I
hg19_v1_chrX_+_118714297_118714297	0.0335985	SOX2.p2	BC042021|UBE2A|7319|ubiquitin-conjugating enzyme E2A	NM_181777|UBE2A|7319|ubiquitin-conjugating enzyme E2A
hg19_v1_chr12_-_752795_752844	0.0334261	SOX2.p2	
hg19_v1_chr19_+_49468587_49468620	0.0334252	SOX2.p2	Y09188|FTL|2512|ferritin, light polypeptide	BC018990|FTL|2512|ferritin, light polypeptide	BC002991|FTL|2512|ferritin, light polypeptide	M11147|FTL|2512|ferritin, light polypeptide
hg19_v1_chr4_-_170192193_170192248	0.0333052	SOX2.p2	NM_020870|SH3RF1|57630|SH3 domain containing ring finger 1
hg19_v1_chr3_+_187871473_187871797	0.0332355	SOX2.p2	NM_001167672|LPP|4026|LIM domain containing preferred translocation partner in lipoma	AK304035|LPP|4026|LIM domain containing preferred translocation partner in lipoma
hg19_v1_chr12_-_57873628_57873632	0.0330595	SOX2.p2	AK304107|ARHGAP9|64333|Rho GTPase activating protein 9	AB051853|ARHGAP9|64333|Rho GTPase activating protein 9	NM_032496|ARHGAP9|64333|Rho GTPase activating protein 9
hg19_v1_chr7_+_107110501_107110504	0.0329362	SOX2.p2	NM_005295|GPR22|2845|G protein-coupled receptor 22	AK122621|GPR22|2845|G protein-coupled receptor 22	AK307393|GPR22|2845|G protein-coupled receptor 22
hg19_v1_chr9_-_123689172_123689172	0.0329293	SOX2.p2	AK090468|TRAF1|7185|TNF receptor-associated factor 1	NM_005658|TRAF1|7185|TNF receptor-associated factor 1
hg19_v1_chr15_-_73661141_73661273	0.0328933	SOX2.p2	AJ132429|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4	DQ854814|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4
hg19_v1_chr3_-_149095333_149095399	0.0328523	SOX2.p2	CR456953|TM4SF1|4071|transmembrane 4 L six family member 1	BC010166|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr9_-_97356007_97356074	0.0328412	SOX2.p2	CR536483|FBP2|8789|fructose-1,6-bisphosphatase 2	HQ258389|FBP2|8789|fructose-1,6-bisphosphatase 2	BC113632|FBP2|8789|fructose-1,6-bisphosphatase 2	BC117477|FBP2|8789|fructose-1,6-bisphosphatase 2	NM_003837|FBP2|8789|fructose-1,6-bisphosphatase 2	Y10812|FBP2|8789|fructose-1,6-bisphosphatase 2
hg19_v1_chr4_+_41258909_41258928	0.0328299	SOX2.p2	BC000332|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC018838|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
hg19_v1_chr7_-_93189121_93189121	0.0327845	SOX2.p2	AB022178|CALCR|799|calcitonin receptor	NM_001164738|CALCR|799|calcitonin receptor
hg19_v1_chr16_+_15737123_15737123	0.0326776	SOX2.p2	BC033900|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)	NM_001143979|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)
hg19_v1_chr6_+_12717036_12717051	0.0326764	SOX2.p2	AK290017|PHACTR1|221692|phosphatase and actin regulator 1	NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1	NM_030948|PHACTR1|221692|phosphatase and actin regulator 1
hg19_v1_chr22_-_19512859_19512859	0.0326292	SOX2.p2	AK092561|CLDN5|7122|claudin 5	NM_001130861|CLDN5|7122|claudin 5	NM_003277|CLDN5|7122|claudin 5
hg19_v1_chrX_-_54824672_54824672	0.0326064	SOX2.p2	AY358170|ITIH6|347365|inter-alpha-trypsin inhibitor heavy chain family, member 6	NM_198510|ITIH6|347365|inter-alpha-trypsin inhibitor heavy chain family, member 6
hg19_v1_chr7_+_141618616_141618675	0.0325313	SOX2.p2	BC136819|OR9A4|130075|olfactory receptor, family 9, subfamily A, member 4	BC136821|OR9A4|130075|olfactory receptor, family 9, subfamily A, member 4	NM_001001656|OR9A4|130075|olfactory receptor, family 9, subfamily A, member 4
hg19_v1_chr17_-_79478956_79479000	0.0324254	SOX2.p2	BC023548|ACTG1|71|actin, gamma 1	BC039144|ACTG1|71|actin, gamma 1
hg19_v1_chr5_+_88185257_88185272	0.0323959	SOX2.p2	AK093634|RPS6|6194|ribosomal protein S6
hg19_v1_chr9_-_34620499_34620533	0.032276	SOX2.p2	AK091661|DCTN3|11258|dynactin 3 (p22)
hg19_v1_chr14_+_69726868_69727007	0.0322138	SOX2.p2	AK299588|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AB032956|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	BC122545|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	BC098578|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AK315848|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AK289745|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	BC036812|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AB078143|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AJ505951|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1
hg19_v1_chr4_-_175204617_175204851	0.032208	SOX2.p2	AF174596|FBXO8|26269|F-box protein 8	AF233224|FBXO8|26269|F-box protein 8	AF115514|FBXO8|26269|F-box protein 8	AY358721|FBXO8|26269|F-box protein 8	BC014679|FBXO8|26269|F-box protein 8	AF201932|FBXO8|26269|F-box protein 8	AK026319|FBXO8|26269|F-box protein 8	BC040456|FBXO8|26269|F-box protein 8	AK314483|FBXO8|26269|F-box protein 8
hg19_v1_chr3_-_160101443_160101553	0.032182	SOX2.p2	AB037795|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)	NM_001190242|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)
hg19_v1_chr7_-_107643330_107643880	0.0320317	SOX2.p2	BC113455|LAMB1|3912|laminin, beta 1	M61916|LAMB1|3912|laminin, beta 1	BX648251|LAMB1|3912|laminin, beta 1	AK303501|LAMB1|3912|laminin, beta 1	AK309921|LAMB1|3912|laminin, beta 1	AK307611|LAMB1|3912|laminin, beta 1	BC044633|LAMB1|3912|laminin, beta 1	BC052598|LAMB1|3912|laminin, beta 1	NM_002291|LAMB1|3912|laminin, beta 1
hg19_v1_chr14_-_23652840_23652905	0.0319418	SOX2.p2	AL365342|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8	NM_012244|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8	Y18483|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8	AL365346|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8	AK223610|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8
hg19_v1_chr2_-_55277421_55277441	0.0319256	SOX2.p2	AF320999|RTN4|57142|reticulon 4	AJ251383|RTN4|57142|reticulon 4	AJ251384|RTN4|57142|reticulon 4	AM393104|RTN4|57142|reticulon 4	AM393557|RTN4|57142|reticulon 4	BC010737|RTN4|57142|reticulon 4
hg19_v1_chr6_+_39760138_39760141	0.0319146	SOX2.p2	
hg19_v1_chr5_-_172755195_172755329	0.0318739	SOX2.p2	AF031036|STC2|8614|stanniocalcin 2	BT019591|STC2|8614|stanniocalcin 2	CR541825|STC2|8614|stanniocalcin 2	EU832632|STC2|8614|stanniocalcin 2	EU832707|STC2|8614|stanniocalcin 2	BC006352|STC2|8614|stanniocalcin 2	BC013958|STC2|8614|stanniocalcin 2	AF055460|STC2|8614|stanniocalcin 2	AB012664|STC2|8614|stanniocalcin 2	AF098462|STC2|8614|stanniocalcin 2
hg19_v1_chr17_-_38256548_38256897	0.0318165	SOX2.p2	M34339|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	X72631|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	BC047875|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	AK315270|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	AK300155|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	BC056148|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1
hg19_v1_chr2_-_170218972_170218991	0.0316821	SOX2.p2	AY265358|LRP2|4036|low density lipoprotein receptor-related protein 2	AY265357|LRP2|4036|low density lipoprotein receptor-related protein 2
hg19_v1_chr9_-_136344182_136344275	0.0316771	SOX2.p2	DQ891513|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	DQ894704|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK294974|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	BC013740|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AJ011372|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK225106|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK222919|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK074836|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK096630|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	Y17803|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK074927|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	NM_001145099|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	NM_017585|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6
hg19_v1_chr14_-_23755308_23755342	0.0316479	SOX2.p2	NM_020834|HOMEZ|57594|homeobox and leucine zipper encoding
hg19_v1_chr9_+_133710746_133710830	0.0316096	SOX2.p2	M14754|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase	NM_005157|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase
hg19_v1_chr6_-_31782786_31782834	0.0315509	SOX2.p2	D85730|HSPA1L|3305|heat shock 70kDa protein 1-like	AK302179|HSPA1L|3305|heat shock 70kDa protein 1-like	BC034483|HSPA1L|3305|heat shock 70kDa protein 1-like	NM_005527|HSPA1L|3305|heat shock 70kDa protein 1-like
hg19_v1_chr19_+_1026608_1026612	0.0315235	SOX2.p2	AK126391|CNN2|1265|calponin 2
hg19_v1_chr16_+_30406432_30406432	0.0315157	SOX2.p2	NM_001214909|ZNF48|197407|zinc finger protein 48
hg19_v1_chr4_+_699529_699731	0.0314953	SOX2.p2	AK225892|PCGF3|10336|polycomb group ring finger 3	NM_006315|PCGF3|10336|polycomb group ring finger 3	AK057124|PCGF3|10336|polycomb group ring finger 3	AK300290|PCGF3|10336|polycomb group ring finger 3	AK125801|PCGF3|10336|polycomb group ring finger 3
hg19_v1_chr6_+_34857021_34857179	0.0314838	SOX2.p2	BC022396|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	NM_015245|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	D86982|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	BC031934|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	AK298987|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	BC132832|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	BC144341|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A
hg19_v1_chr3_-_114866090_114866139	0.0314707	SOX2.p2	BC010934|ZBTB20|26137|zinc finger and BTB domain containing 20	BX647778|ZBTB20|26137|zinc finger and BTB domain containing 20	BX648237|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_015642|ZBTB20|26137|zinc finger and BTB domain containing 20
hg19_v1_chr4_+_41258895_41258897	0.0314139	SOX2.p2	NM_004181|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
hg19_v1_chr4_-_122085475_122085494	0.0313558	SOX2.p2	AF277289|TNIP3|79931|TNFAIP3 interacting protein 3	AJ320534|TNIP3|79931|TNFAIP3 interacting protein 3	AK290409|TNIP3|79931|TNFAIP3 interacting protein 3	BC128408|TNIP3|79931|TNFAIP3 interacting protein 3	EF585496|TNIP3|79931|TNFAIP3 interacting protein 3	NM_024873|TNIP3|79931|TNFAIP3 interacting protein 3
hg19_v1_chr11_+_93862163_93862478	0.0313478	SOX2.p2	AY359023|PANX1|24145|pannexin 1	FM201789|PANX1|24145|pannexin 1
hg19_v1_chr13_-_46756291_46756294	0.0313067	SOX2.p2	J02923|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)
hg19_v1_chr3_+_46283871_46283962	0.031273	SOX2.p2	NM_001164680|CCR3|1232|chemokine (C-C motif) receptor 3	NM_001837|CCR3|1232|chemokine (C-C motif) receptor 3	NM_178328|CCR3|1232|chemokine (C-C motif) receptor 3	NM_178329|CCR3|1232|chemokine (C-C motif) receptor 3	AF262300|CCR3|1232|chemokine (C-C motif) receptor 3	AF262299|CCR3|1232|chemokine (C-C motif) receptor 3	AF224495|CCR3|1232|chemokine (C-C motif) receptor 3	AF262301|CCR3|1232|chemokine (C-C motif) receptor 3	AF262302|CCR3|1232|chemokine (C-C motif) receptor 3	AF262303|CCR3|1232|chemokine (C-C motif) receptor 3	AF262304|CCR3|1232|chemokine (C-C motif) receptor 3	BC130318|CCR3|1232|chemokine (C-C motif) receptor 3	BC130320|CCR3|1232|chemokine (C-C motif) receptor 3	BC110297|CCR3|1232|chemokine (C-C motif) receptor 3
hg19_v1_chr6_-_24719286_24719402	0.0312113	SOX2.p2	AK022681|C6orf62|81688|chromosome 6 open reading frame 62	AB075502|C6orf62|81688|chromosome 6 open reading frame 62	AL136632|C6orf62|81688|chromosome 6 open reading frame 62	NM_030939|C6orf62|81688|chromosome 6 open reading frame 62
hg19_v1_chrX_-_107682600_107682726	0.0312075	SOX2.p2	BT007228|COL4A6|1288|collagen, type IV, alpha 6	L22763|COL4A6|1288|collagen, type IV, alpha 6	U04845|COL4A6|1288|collagen, type IV, alpha 6	NM_001847|COL4A6|1288|collagen, type IV, alpha 6	BC005305|COL4A6|1288|collagen, type IV, alpha 6
hg19_v1_chr3_+_182971213_182971343	0.0312068	SOX2.p2	AB209517|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg19_v1_chr9_+_116356199_116356222	0.0311982	SOX2.p2	AF490838|RGS3|5998|regulator of G-protein signaling 3	NM_144489|RGS3|5998|regulator of G-protein signaling 3	AK054584|RGS3|5998|regulator of G-protein signaling 3
hg19_v1_chr2_-_38830014_38830067	0.0311048	SOX2.p2	AY236963|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like	BC017480|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like	AK291462|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like
hg19_v1_chr1_+_172502291_172502471	0.0310804	SOX2.p2	NM_016227|C1orf9|51430|chromosome 1 open reading frame 9	AK302509|C1orf9|51430|chromosome 1 open reading frame 9	AL035291|C1orf9|51430|chromosome 1 open reading frame 9	BC137125|C1orf9|51430|chromosome 1 open reading frame 9	BC144487|C1orf9|51430|chromosome 1 open reading frame 9
hg19_v1_chr6_-_30655671_30655671	0.0310058	SOX2.p2	AK124880|PPP1R18|170954|protein phosphatase 1, regulatory subunit 18	NM_133471|PPP1R18|170954|protein phosphatase 1, regulatory subunit 18
hg19_v1_chr22_+_40573879_40574120	0.0309579	SOX2.p2	NM_001162501|TNRC6B|23112|trinucleotide repeat containing 6B	NM_015088|TNRC6B|23112|trinucleotide repeat containing 6B	AK296590|TNRC6B|23112|trinucleotide repeat containing 6B	AK294519|TNRC6B|23112|trinucleotide repeat containing 6B	AB029016|TNRC6B|23112|trinucleotide repeat containing 6B
hg19_v1_chr17_-_44895962_44896081	0.030954	SOX2.p2	AB067628|WNT3|7473|wingless-type MMTV integration site family, member 3	BC114219|WNT3|7473|wingless-type MMTV integration site family, member 3	BC112116|WNT3|7473|wingless-type MMTV integration site family, member 3	BC112118|WNT3|7473|wingless-type MMTV integration site family, member 3	AY009397|WNT3|7473|wingless-type MMTV integration site family, member 3	NM_030753|WNT3|7473|wingless-type MMTV integration site family, member 3
hg19_v1_chr6_-_99797530_99797530	0.0309141	SOX2.p2	BC004869|C6orf168|84553|chromosome 6 open reading frame 168	BC011583|C6orf168|84553|chromosome 6 open reading frame 168	NM_032511|C6orf168|84553|chromosome 6 open reading frame 168
hg19_v1_chr6_+_89790412_89790462	0.0308607	SOX2.p2	NM_006813|PNRC1|10957|proline-rich nuclear receptor coactivator 1
hg19_v1_chr5_+_15500736_15500760	0.0307995	SOX2.p2	BC075061|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg19_v1_chr11_-_73693883_73693888	0.0307713	SOX2.p2	AK222540|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)	AK222557|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)	NM_003355|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)
hg19_v1_chr12_-_54582588_54582785	0.0306999	SOX2.p2	BC088352|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	BC000417|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK091468|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	NM_001243789|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	NM_001243790|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	BC105607|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK001789|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK001235|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK222473|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK290274|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	NM_001243787|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	NM_001243788|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	NM_001243791|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	NM_014311|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1
hg19_v1_chr2_-_100722259_100722277	0.0306633	SOX2.p2	AK308645|AFF3|3899|AF4/FMR2 family, member 3
hg19_v1_chr2_+_220309373_220309394	0.0305976	SOX2.p2	AY603755|SPEG|10290|SPEG complex locus
hg19_v1_chr1_-_21503352_21503388	0.0305916	SOX2.p2	NM_001198801|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3	NM_001198802|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg19_v1_chr10_-_115934363_115934363	0.0304623	SOX2.p2	NM_018017|C10orf118|55088|chromosome 10 open reading frame 118
hg19_v1_chr10_-_11653529_11653744	0.0304527	SOX2.p2	AK292944|USP6NL|9712|USP6 N-terminal like	BC042943|USP6NL|9712|USP6 N-terminal like	D13644|USP6NL|9712|USP6 N-terminal like	BC010351|USP6NL|9712|USP6 N-terminal like	NM_014688|USP6NL|9712|USP6 N-terminal like
hg19_v1_chr14_+_65878579_65878661	0.0304334	SOX2.p2	BC142958|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AK292413|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AK294242|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	Y17976|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	Y17977|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)
hg19_v1_chrX_+_107683015_107683153	0.0304304	SOX2.p2	BC151846|COL4A5|1287|collagen, type IV, alpha 5	M90464|COL4A5|1287|collagen, type IV, alpha 5	NM_000495|COL4A5|1287|collagen, type IV, alpha 5	NM_033380|COL4A5|1287|collagen, type IV, alpha 5
hg19_v1_chr1_-_50889102_50889121	0.0303678	SOX2.p2	NM_032110|DMRTA2|63950|DMRT-like family A2
hg19_v1_chr1_-_94586678_94586704	0.0303131	SOX2.p2	AF001945|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4	U88667|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4	AK295818|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4	AF000148|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4	AB210040|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4	DQ426859|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4	NM_000350|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4
hg19_v1_chr12_+_101988746_101988846	0.0303101	SOX2.p2	AK296681|MYBPC1|4604|myosin binding protein C, slow type	NM_002465|MYBPC1|4604|myosin binding protein C, slow type	NM_206819|MYBPC1|4604|myosin binding protein C, slow type	NM_206820|MYBPC1|4604|myosin binding protein C, slow type	NM_206821|MYBPC1|4604|myosin binding protein C, slow type	AK056587|MYBPC1|4604|myosin binding protein C, slow type	AK292976|MYBPC1|4604|myosin binding protein C, slow type	AK295727|MYBPC1|4604|myosin binding protein C, slow type	AK303401|MYBPC1|4604|myosin binding protein C, slow type	BC015187|MYBPC1|4604|myosin binding protein C, slow type	BC030980|MYBPC1|4604|myosin binding protein C, slow type	BC065720|MYBPC1|4604|myosin binding protein C, slow type	BC092418|MYBPC1|4604|myosin binding protein C, slow type	X66276|MYBPC1|4604|myosin binding protein C, slow type	X73114|MYBPC1|4604|myosin binding protein C, slow type	AL831993|MYBPC1|4604|myosin binding protein C, slow type	AL832000|MYBPC1|4604|myosin binding protein C, slow type	AL832332|MYBPC1|4604|myosin binding protein C, slow type	AL832350|MYBPC1|4604|myosin binding protein C, slow type	AL832354|MYBPC1|4604|myosin binding protein C, slow type	AL832456|MYBPC1|4604|myosin binding protein C, slow type	BC117217|MYBPC1|4604|myosin binding protein C, slow type	BC143495|MYBPC1|4604|myosin binding protein C, slow type	BC143502|MYBPC1|4604|myosin binding protein C, slow type	BC143503|MYBPC1|4604|myosin binding protein C, slow type	BC143504|MYBPC1|4604|myosin binding protein C, slow type	AL834249|MYBPC1|4604|myosin binding protein C, slow type	BX649073|MYBPC1|4604|myosin binding protein C, slow type	AM392734|MYBPC1|4604|myosin binding protein C, slow type	EU831907|MYBPC1|4604|myosin binding protein C, slow type	EU832001|MYBPC1|4604|myosin binding protein C, slow type
hg19_v1_chr21_+_27107731_27107801	0.0302979	SOX2.p2	U13044|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa
hg19_v1_chr17_+_59489111_59489111	0.0302718	SOX2.p2	BC046200|C17orf82|388407|chromosome 17 open reading frame 82	NM_203425|C17orf82|388407|chromosome 17 open reading frame 82
hg19_v1_chr2_-_55277459_55277586	0.0302574	SOX2.p2	AK130812|RTN4|57142|reticulon 4	AB015639|RTN4|57142|reticulon 4	BC071848|RTN4|57142|reticulon 4	AB020693|RTN4|57142|reticulon 4	BC152425|RTN4|57142|reticulon 4	AF148537|RTN4|57142|reticulon 4	AF148538|RTN4|57142|reticulon 4	AK098385|RTN4|57142|reticulon 4	BC012619|RTN4|57142|reticulon 4
hg19_v1_chr12_-_6740814_6740817	0.0302337	SOX2.p2	NM_001142961|LPAR5|57121|lysophosphatidic acid receptor 5
hg19_v1_chr12_-_54541008_54541155	0.0301766	SOX2.p2	
hg19_v1_chr2_-_85641128_85641145	0.0301576	SOX2.p2	AK313898|CAPG|822|capping protein (actin filament), gelsolin-like	AK300507|CAPG|822|capping protein (actin filament), gelsolin-like
hg19_v1_chr1_+_39875175_39875175	0.0301122	SOX2.p2	NM_015038|KIAA0754|643314|KIAA0754
hg19_v1_chr10_-_30316338_30316525	0.0300804	SOX2.p2	BC047548|KIAA1462|57608|KIAA1462
hg19_v1_chr14_+_52327021_52327131	0.030074	SOX2.p2	NM_001243773|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2	NM_001243774|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2	NM_053064|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2	AK092371|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2
hg19_v1_chr1_-_21503304_21503344	0.0300363	SOX2.p2	BC072413|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3	AB209119|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg19_v1_chr20_-_43977023_43977087	0.0300307	SOX2.p2	CR542045|SDC4|6385|syndecan 4	CR542074|SDC4|6385|syndecan 4	DQ890718|SDC4|6385|syndecan 4	DQ893898|SDC4|6385|syndecan 4	X67016|SDC4|6385|syndecan 4	AK222695|SDC4|6385|syndecan 4	AK223243|SDC4|6385|syndecan 4	AK303964|SDC4|6385|syndecan 4	AK312507|SDC4|6385|syndecan 4	BC030805|SDC4|6385|syndecan 4	D13292|SDC4|6385|syndecan 4	NM_002999|SDC4|6385|syndecan 4
hg19_v1_chr11_-_118095708_118095808	0.0299528	SOX2.p2	AK090409|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AY138965|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AY358362|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AY093686|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AK298722|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AK300851|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AK301099|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AJ515553|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	NM_001098526|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1
hg19_v1_chrX_+_28605558_28605680	0.0299464	SOX2.p2	AF181284|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1	AJ243874|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1	NM_014271|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1
hg19_v1_chr3_-_114478117_114478123	0.029896	SOX2.p2	AK225788|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164344|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164345|ZBTB20|26137|zinc finger and BTB domain containing 20
hg19_v1_chr1_-_243418675_243418707	0.0298911	SOX2.p2	NM_001042404|CEP170|9859|centrosomal protein 170kDa	NM_001042405|CEP170|9859|centrosomal protein 170kDa	NM_014812|CEP170|9859|centrosomal protein 170kDa
hg19_v1_chr14_+_103592663_103592873	0.0298773	SOX2.p2	M92357|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2	NM_006291|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2	BC128449|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2	BC128450|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2
hg19_v1_chr3_-_47957475_47957611	0.0297623	SOX2.p2	
hg19_v1_chr12_-_54779482_54779586	0.0296033	SOX2.p2	AB593085|ZNF385A|25946|zinc finger protein 385A	AK092724|ZNF385A|25946|zinc finger protein 385A	AY461717|ZNF385A|25946|zinc finger protein 385A
hg19_v1_chr11_+_61102035_61102149	0.029602	SOX2.p2	BC001341|DAK|26007|dihydroxyacetone kinase 2 homolog (S. cerevisiae)
hg19_v1_chr1_-_201476248_201476386	0.0295729	SOX2.p2	AK057876|CSRP1|1465|cysteine and glycine-rich protein 1	AK122812|CSRP1|1465|cysteine and glycine-rich protein 1	AK302237|CSRP1|1465|cysteine and glycine-rich protein 1	AK304415|CSRP1|1465|cysteine and glycine-rich protein 1	NM_001193570|CSRP1|1465|cysteine and glycine-rich protein 1	NM_004078|CSRP1|1465|cysteine and glycine-rich protein 1
hg19_v1_chr12_-_45270071_45270139	0.0294884	SOX2.p2	AK056082|NELL2|4753|NEL-like 2 (chicken)	AK297521|NELL2|4753|NEL-like 2 (chicken)	AK309825|NELL2|4753|NEL-like 2 (chicken)	D83018|NELL2|4753|NEL-like 2 (chicken)
hg19_v1_chr1_+_178310605_178310663	0.0294821	SOX2.p2	AF047711|RASAL2|9462|RAS protein activator like 2	NM_004841|RASAL2|9462|RAS protein activator like 2	AK290308|RASAL2|9462|RAS protein activator like 2
hg19_v1_chr6_+_89790464_89790613	0.0294205	SOX2.p2	AK312665|PNRC1|10957|proline-rich nuclear receptor coactivator 1	AK130046|PNRC1|10957|proline-rich nuclear receptor coactivator 1	U03105|PNRC1|10957|proline-rich nuclear receptor coactivator 1	BC018112|PNRC1|10957|proline-rich nuclear receptor coactivator 1	AY303779|PNRC1|10957|proline-rich nuclear receptor coactivator 1
hg19_v1_chr1_-_150738232_150738233	0.0293869	SOX2.p2	BC002642|CTSS|1520|cathepsin S
hg19_v1_chr9_-_74383301_74383855	0.0292918	SOX2.p2	BC140773|TMEM2|23670|transmembrane protein 2	BC144510|TMEM2|23670|transmembrane protein 2	BC171782|TMEM2|23670|transmembrane protein 2	AB037833|TMEM2|23670|transmembrane protein 2	BC146780|TMEM2|23670|transmembrane protein 2	AF137030|TMEM2|23670|transmembrane protein 2	AK300405|TMEM2|23670|transmembrane protein 2	NM_001135820|TMEM2|23670|transmembrane protein 2	NM_013390|TMEM2|23670|transmembrane protein 2
hg19_v1_chr20_-_35201677_35201706	0.0292913	SOX2.p2	
hg19_v1_chrX_-_24665454_24665465	0.0292889	SOX2.p2	AK315323|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_001163265|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_004845|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg19_v1_chr7_+_43152196_43152257	0.0291859	SOX2.p2	AB002320|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	BC151227|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	NM_015052|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	AK294918|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1
hg19_v1_chr7_-_111846384_111846540	0.0291231	SOX2.p2	AK095906|DOCK4|9732|dedicator of cytokinesis 4	AK309605|DOCK4|9732|dedicator of cytokinesis 4	NM_014705|DOCK4|9732|dedicator of cytokinesis 4
hg19_v1_chr17_+_30814552_30814643	0.0291221	SOX2.p2	X80343|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)	BC026347|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)	BT019573|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)
hg19_v1_chr3_-_47933997_47934064	0.0290073	SOX2.p2	AK054696|MAP4|4134|microtubule-associated protein 4
hg19_v1_chr10_-_94003002_94003037	0.0289605	SOX2.p2	AB023157|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3	NM_001178137|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3
hg19_v1_chr21_+_37442298_37442413	0.0289398	SOX2.p2	AK294142|CBR1|873|carbonyl reductase 1	J04056|CBR1|873|carbonyl reductase 1	AK308691|CBR1|873|carbonyl reductase 1	AK311219|CBR1|873|carbonyl reductase 1	BC015640|CBR1|873|carbonyl reductase 1	AK314879|CBR1|873|carbonyl reductase 1	BC002511|CBR1|873|carbonyl reductase 1	DQ892353|CBR1|873|carbonyl reductase 1	DQ895559|CBR1|873|carbonyl reductase 1	BT019843|CBR1|873|carbonyl reductase 1	CR541708|CBR1|873|carbonyl reductase 1
hg19_v1_chr9_+_116356407_116356556	0.0288434	SOX2.p2	BC018072|RGS3|5998|regulator of G-protein signaling 3	BC019039|RGS3|5998|regulator of G-protein signaling 3
hg19_v1_chr2_-_38829973_38830012	0.0288247	SOX2.p2	AY236962|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like
hg19_v1_chr15_+_76629101_76629223	0.0288094	SOX2.p2	AB593133|ISL2|64843|ISL LIM homeobox 2	AK001022|ISL2|64843|ISL LIM homeobox 2	BC012136|ISL2|64843|ISL LIM homeobox 2	NM_145805|ISL2|64843|ISL LIM homeobox 2	BC011967|ISL2|64843|ISL LIM homeobox 2	EU446846|ISL2|64843|ISL LIM homeobox 2
hg19_v1_chr17_+_3377346_3377403	0.0287689	SOX2.p2	AK312901|ASPA|443|aspartoacylase	NM_001128085|ASPA|443|aspartoacylase
hg19_v1_chr1_-_201476241_201476245	0.028721	SOX2.p2	BC018806|CSRP1|1465|cysteine and glycine-rich protein 1
hg19_v1_chr15_+_99192696_99192816	0.0285164	SOX2.p2	NM_000875|IGF1R|3480|insulin-like growth factor 1 receptor	X04434|IGF1R|3480|insulin-like growth factor 1 receptor	BC113610|IGF1R|3480|insulin-like growth factor 1 receptor	BC113612|IGF1R|3480|insulin-like growth factor 1 receptor	BC143721|IGF1R|3480|insulin-like growth factor 1 receptor	EU826611|IGF1R|3480|insulin-like growth factor 1 receptor	EU826612|IGF1R|3480|insulin-like growth factor 1 receptor
hg19_v1_chr7_-_27205123_27205130	0.0284965	SOX2.p2	BC006537|HOXA9|3205|homeobox A9	BC010023|HOXA9|3205|homeobox A9
hg19_v1_chr2_+_162272800_162272843	0.0284415	SOX2.p2	AK297438|TBR1|10716|T-box, brain, 1	AK312567|TBR1|10716|T-box, brain, 1	AK226050|TBR1|10716|T-box, brain, 1	BC029289|TBR1|10716|T-box, brain, 1
hg19_v1_chr3_-_87040268_87040272	0.0284033	SOX2.p2	BC094780|VGLL3|389136|vestigial like 3 (Drosophila)
hg19_v1_chr21_+_37507209_37507490	0.0283703	SOX2.p2	AB041012|CBR3|874|carbonyl reductase 3	NM_001236|CBR3|874|carbonyl reductase 3	AB124847|CBR3|874|carbonyl reductase 3	AK223429|CBR3|874|carbonyl reductase 3	BC002812|CBR3|874|carbonyl reductase 3	AB004854|CBR3|874|carbonyl reductase 3	CR541709|CBR3|874|carbonyl reductase 3
hg19_v1_chr11_-_104034685_104034903	0.0282882	SOX2.p2	AY359116|PDGFD|80310|platelet derived growth factor D	AY027517|PDGFD|80310|platelet derived growth factor D	AY027518|PDGFD|80310|platelet derived growth factor D	AF113216|PDGFD|80310|platelet derived growth factor D	AB033832|PDGFD|80310|platelet derived growth factor D	AF336376|PDGFD|80310|platelet derived growth factor D	AK292801|PDGFD|80310|platelet derived growth factor D
hg19_v1_chr8_-_23261632_23261666	0.028262	SOX2.p2	AK222477|LOXL2|4017|lysyl oxidase-like 2	AK312266|LOXL2|4017|lysyl oxidase-like 2	BC020481|LOXL2|4017|lysyl oxidase-like 2	AK293292|LOXL2|4017|lysyl oxidase-like 2
hg19_v1_chr1_+_50574589_50574594	0.0282321	SOX2.p2	NM_001144774|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_021952|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg19_v1_chr22_+_20909221_20909393	0.0282266	SOX2.p2	BC017110|MED15|51586|mediator complex subunit 15
hg19_v1_chr6_+_37137882_37138363	0.0282228	SOX2.p2	NM_001243186|PIM1|5292|pim-1 oncogene	NM_002648|PIM1|5292|pim-1 oncogene	M54915|PIM1|5292|pim-1 oncogene	BC020224|PIM1|5292|pim-1 oncogene	M24779|PIM1|5292|pim-1 oncogene	M16750|PIM1|5292|pim-1 oncogene	AK301158|PIM1|5292|pim-1 oncogene
hg19_v1_chr6_+_114178516_114178953	0.0282149	SOX2.p2	AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate
hg19_v1_chr8_-_105479147_105479284	0.0281276	SOX2.p2	BC034395|DPYS|1807|dihydropyrimidinase	D78011|DPYS|1807|dihydropyrimidinase	NM_001385|DPYS|1807|dihydropyrimidinase
hg19_v1_chr2_+_208576239_208576364	0.0280694	SOX2.p2	AK097751|CCNYL1|151195|cyclin Y-like 1	NM_001142300|CCNYL1|151195|cyclin Y-like 1	NM_152523|CCNYL1|151195|cyclin Y-like 1
hg19_v1_chr12_+_18891040_18891201	0.0280579	SOX2.p2	BC016745|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3	NM_033328|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3	AB053259|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3	AK058174|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3
hg19_v1_chr5_+_140787769_140787769	0.0280549	SOX2.p2	AF152335|PCDHGB6|56100|protocadherin gamma subfamily B, 6	AF152522|PCDHGB6|56100|protocadherin gamma subfamily B, 6	NM_018926|PCDHGB6|56100|protocadherin gamma subfamily B, 6	NM_032100|PCDHGB6|56100|protocadherin gamma subfamily B, 6
hg19_v1_chr1_-_26324534_26324647	0.0280365	SOX2.p2	BC001158|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa	U89386|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa	AK313815|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa	D87845|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa	NM_000437|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa
hg19_v1_chr5_+_172068188_172068319	0.0280192	SOX2.p2	GQ414757|NEURL1B|54492|neuralized homolog 1B (Drosophila)	GQ414758|NEURL1B|54492|neuralized homolog 1B (Drosophila)	GQ414759|NEURL1B|54492|neuralized homolog 1B (Drosophila)	NM_001142651|NEURL1B|54492|neuralized homolog 1B (Drosophila)
hg19_v1_chr22_+_45072936_45073004	0.0279676	SOX2.p2	AK091884|PRR5|55615|proline rich 5 (renal)	AK055848|PRR5|55615|proline rich 5 (renal)
hg19_v1_chr3_-_194353908_194353945	0.0278808	SOX2.p2	BX647418|TMEM44|93109|transmembrane protein 44	HQ258241|TMEM44|93109|transmembrane protein 44
hg19_v1_chrX_+_69353764_69353797	0.0278631	SOX2.p2	Y08915|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	BT006736|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	CR456782|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	DQ892322|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	DQ895524|IGBP1|3476|immunoglobulin (CD79A) binding protein 1
hg19_v1_chr8_-_23261675_23261721	0.0277978	SOX2.p2	NM_002318|LOXL2|4017|lysyl oxidase-like 2
hg19_v1_chr19_-_17414083_17414281	0.0277888	SOX2.p2	BC020173|ABHD8|79575|abhydrolase domain containing 8	BC039087|ABHD8|79575|abhydrolase domain containing 8	BC007895|ABHD8|79575|abhydrolase domain containing 8	AK225140|ABHD8|79575|abhydrolase domain containing 8	AK315366|ABHD8|79575|abhydrolase domain containing 8	AK021805|ABHD8|79575|abhydrolase domain containing 8	AK225340|ABHD8|79575|abhydrolase domain containing 8	AK298251|ABHD8|79575|abhydrolase domain containing 8	NM_024527|ABHD8|79575|abhydrolase domain containing 8
hg19_v1_chr7_-_131241321_131241405	0.0277658	SOX2.p2	BC042466|PODXL|5420|podocalyxin-like	U97519|PODXL|5420|podocalyxin-like	AK223573|PODXL|5420|podocalyxin-like	AK055816|PODXL|5420|podocalyxin-like	NM_001018111|PODXL|5420|podocalyxin-like	NM_005397|PODXL|5420|podocalyxin-like
hg19_v1_chr4_-_186456580_186456711	0.0277567	SOX2.p2	AK129863|PDLIM3|27295|PDZ and LIM domain 3	BT007341|PDLIM3|27295|PDZ and LIM domain 3	AK222966|PDLIM3|27295|PDZ and LIM domain 3	AF002280|PDLIM3|27295|PDZ and LIM domain 3	AF002282|PDLIM3|27295|PDZ and LIM domain 3	BC027870|PDLIM3|27295|PDZ and LIM domain 3	AF039018|PDLIM3|27295|PDZ and LIM domain 3	BC001017|PDLIM3|27295|PDZ and LIM domain 3	AK313253|PDLIM3|27295|PDZ and LIM domain 3	NM_001114107|PDLIM3|27295|PDZ and LIM domain 3	NM_014476|PDLIM3|27295|PDZ and LIM domain 3
hg19_v1_chrX_+_119737984_119738091	0.0277519	SOX2.p2	BC001013|MCTS1|28985|malignant T cell amplified sequence 1	AY364258|MCTS1|28985|malignant T cell amplified sequence 1
hg19_v1_chr4_+_41614911_41614927	0.0277082	SOX2.p2	AK298915|LIMCH1|22998|LIM and calponin homology domains 1	AK299297|LIMCH1|22998|LIM and calponin homology domains 1	BC068200|LIMCH1|22998|LIM and calponin homology domains 1	BX537916|LIMCH1|22998|LIM and calponin homology domains 1	CR749205|LIMCH1|22998|LIM and calponin homology domains 1	NM_001112719|LIMCH1|22998|LIM and calponin homology domains 1	NM_001112720|LIMCH1|22998|LIM and calponin homology domains 1
hg19_v1_chr3_+_97158453_97158489	0.0276528	SOX2.p2	AK302040|EPHA6|285220|EPH receptor A6	AK310249|EPHA6|285220|EPH receptor A6	BC031881|EPHA6|285220|EPH receptor A6	BC067287|EPHA6|285220|EPH receptor A6	AK302080|EPHA6|285220|EPH receptor A6	AL133666|EPHA6|285220|EPH receptor A6	NM_173655|EPHA6|285220|EPH receptor A6
hg19_v1_chr10_+_96698409_96698476	0.0275709	SOX2.p2	AK289420|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	AK298458|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	BC020754|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	NM_000771|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	BC070317|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	M61855|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	M61857|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	BC125054|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	D00173|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	M21939|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	M15331|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	S46963|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9
hg19_v1_chr22_+_38382170_38382175	0.0275557	SOX2.p2	AK098727|LOC100131530|100131530|uncharacterized LOC100131530
hg19_v1_chr2_-_109150596_109150695	0.0275195	SOX2.p2	BC004487|FLJ38668|644903|uncharacterized LOC644903	AK095987|FLJ38668|644903|uncharacterized LOC644903
hg19_v1_chr17_-_38978824_38978870	0.0275067	SOX2.p2	J04029|KRT10|3858|keratin 10	DQ893356|KRT10|3858|keratin 10	DQ896675|KRT10|3858|keratin 10	BC034697|KRT10|3858|keratin 10	NM_000421|KRT10|3858|keratin 10
hg19_v1_chr1_+_42928873_42929024	0.0275008	SOX2.p2	AL832217|CCDC30|728621|coiled-coil domain containing 30
hg19_v1_chr17_-_79478236_79478585	0.0275004	SOX2.p2	BC009544|ACTG1|71|actin, gamma 1	BC010417|ACTG1|71|actin, gamma 1	BC018861|ACTG1|71|actin, gamma 1	M16247|ACTG1|71|actin, gamma 1
hg19_v1_chr2_+_113279582_113279727	0.0274931	SOX2.p2	AK126378|TTL|150465|tubulin tyrosine ligase
hg19_v1_chr16_+_58497548_58497612	0.0274642	SOX2.p2	NM_020465|NDRG4|65009|NDRG family member 4
hg19_v1_chr18_+_55888838_55888862	0.0274281	SOX2.p2	AF210730|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AY243321|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg19_v1_chr5_-_77805930_77806179	0.0273913	SOX2.p2	D86961|LHFPL2|10184|lipoma HMGIC fusion partner-like 2	BC136335|LHFPL2|10184|lipoma HMGIC fusion partner-like 2	BC136336|LHFPL2|10184|lipoma HMGIC fusion partner-like 2	AY309920|LHFPL2|10184|lipoma HMGIC fusion partner-like 2
hg19_v1_chr4_-_40517913_40518003	0.0273864	SOX2.p2	AK000280|RBM47|54502|RNA binding motif protein 47	NM_019027|RBM47|54502|RNA binding motif protein 47
hg19_v1_chr8_-_145060563_145060591	0.0273693	SOX2.p2	AK303317|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	AK128537|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	BC132961|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	BC136542|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	BC144235|PARP10|84875|poly (ADP-ribose) polymerase family, member 10
hg19_v1_chrX_+_70315637_70316378	0.0273517	SOX2.p2	NM_001170931|FOXO4|4303|forkhead box O4	NM_005938|FOXO4|4303|forkhead box O4	X93996|FOXO4|4303|forkhead box O4	BC106761|FOXO4|4303|forkhead box O4	AF384029|FOXO4|4303|forkhead box O4
hg19_v1_chr4_+_15480833_15480865	0.0272776	SOX2.p2	AB037766|CC2D2A|57545|coiled-coil and C2 domain containing 2A	BC103710|CC2D2A|57545|coiled-coil and C2 domain containing 2A
hg19_v1_chr15_+_31619043_31619633	0.0272749	SOX2.p2	AF132599|KLF13|51621|Kruppel-like factor 13	BC035503|KLF13|51621|Kruppel-like factor 13	NM_015995|KLF13|51621|Kruppel-like factor 13	BC010438|KLF13|51621|Kruppel-like factor 13	BC013946|KLF13|51621|Kruppel-like factor 13	BC012741|KLF13|51621|Kruppel-like factor 13	AF150628|KLF13|51621|Kruppel-like factor 13
hg19_v1_chr1_-_217250230_217250311	0.0272624	SOX2.p2	AB362218|ESRRG|2104|estrogen-related receptor gamma	AK131193|ESRRG|2104|estrogen-related receptor gamma	NM_001243507|ESRRG|2104|estrogen-related receptor gamma	NM_001243509|ESRRG|2104|estrogen-related receptor gamma
hg19_v1_chr6_+_135502521_135502651	0.0272225	SOX2.p2	AJ616235|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	M15024|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ616791|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AF104863|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787443|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787444|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787445|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787446|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787447|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787448|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787449|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787450|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787451|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787452|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787453|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787454|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787455|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787456|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787457|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787458|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787459|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787460|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787461|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787462|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787463|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787464|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787465|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787466|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787467|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787468|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787469|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787470|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787471|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787472|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787473|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787474|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787475|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)
hg19_v1_chr1_-_93399531_93399654	0.0272001	SOX2.p2	
hg19_v1_chr3_-_169530451_169530693	0.0271896	SOX2.p2	AK293661|LRRC34|151827|leucine rich repeat containing 34	AK095125|LRRC34|151827|leucine rich repeat containing 34	NM_001172779|LRRC34|151827|leucine rich repeat containing 34	NM_001172780|LRRC34|151827|leucine rich repeat containing 34	NM_153353|LRRC34|151827|leucine rich repeat containing 34
hg19_v1_chr4_+_41258941_41259010	0.0271847	SOX2.p2	AK054579|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	AK315368|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC006305|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC005117|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	DQ891998|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	DQ895188|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	AB209038|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	X04741|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
hg19_v1_chr5_-_22853730_22853730	0.0271218	SOX2.p2	L33477|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)	NM_004061|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)
hg19_v1_chr1_+_26737306_26737381	0.0271161	SOX2.p2	AF521099|LIN28A|79727|lin-28 homolog A (C. elegans)	AK022519|LIN28A|79727|lin-28 homolog A (C. elegans)	DQ893398|LIN28A|79727|lin-28 homolog A (C. elegans)	DQ896719|LIN28A|79727|lin-28 homolog A (C. elegans)
hg19_v1_chr4_-_120549115_120549238	0.0270739	SOX2.p2	AF155194|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	NM_033437|PDE5A|8654|phosphodiesterase 5A, cGMP-specific
hg19_v1_chr3_-_126327397_126327397	0.0270091	SOX2.p2	AB113648|TXNRD3NB|645840|thioredoxin reductase 3 neighbor	NM_001039783|TXNRD3NB|645840|thioredoxin reductase 3 neighbor
hg19_v1_chr5_+_137673223_137673286	0.0269364	SOX2.p2	NM_001135647|FAM53C|51307|family with sequence similarity 53, member C	BC052993|FAM53C|51307|family with sequence similarity 53, member C
hg19_v1_chr20_+_32319765_32319827	0.0269128	SOX2.p2	BC132873|ZNF341|84905|zinc finger protein 341	BC144188|ZNF341|84905|zinc finger protein 341	BC157823|ZNF341|84905|zinc finger protein 341	BC146811|ZNF341|84905|zinc finger protein 341	BC094738|ZNF341|84905|zinc finger protein 341	NM_032819|ZNF341|84905|zinc finger protein 341	BC063492|ZNF341|84905|zinc finger protein 341	BC040440|ZNF341|84905|zinc finger protein 341	HQ258664|ZNF341|84905|zinc finger protein 341
hg19_v1_chr9_+_103191795_103191795	0.0268548	SOX2.p2	NM_001198806|C9orf30|91283|chromosome 9 open reading frame 30
hg19_v1_chr3_-_182880463_182880666	0.0268455	SOX2.p2	AB013924|LAMP3|27074|lysosomal-associated membrane protein 3	AK313172|LAMP3|27074|lysosomal-associated membrane protein 3	BC032940|LAMP3|27074|lysosomal-associated membrane protein 3	NM_014398|LAMP3|27074|lysosomal-associated membrane protein 3
hg19_v1_chr15_-_59665069_59665072	0.0268167	SOX2.p2	BC098392|MYO1E|4643|myosin IE	NM_004998|MYO1E|4643|myosin IE	U14391|MYO1E|4643|myosin IE
hg19_v1_chr8_-_22550708_22550861	0.0267858	SOX2.p2	AK292464|EGR3|1960|early growth response 3	AK313604|EGR3|1960|early growth response 3	X63741|EGR3|1960|early growth response 3	NM_004430|EGR3|1960|early growth response 3	S40832|EGR3|1960|early growth response 3
hg19_v1_chr12_+_109967734_109967788	0.0266583	SOX2.p2	AK304678|UBE3B|89910|ubiquitin protein ligase E3B
hg19_v1_chr10_-_99094427_99094479	0.0266545	SOX2.p2	BC020165|FRAT2|23401|frequently rearranged in advanced T-cell lymphomas 2	AB045118|FRAT2|23401|frequently rearranged in advanced T-cell lymphomas 2	NM_012083|FRAT2|23401|frequently rearranged in advanced T-cell lymphomas 2
hg19_v1_chr9_+_6720862_6720862	0.0266463	SOX2.p2	AK310439|KDM4C|23081|lysine (K)-specific demethylase 4C	NM_001146696|KDM4C|23081|lysine (K)-specific demethylase 4C
hg19_v1_chr12_+_53443834_53443966	0.0266454	SOX2.p2	AF518729|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	CR936725|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	NM_170754|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BX647126|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	AK131320|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BC142668|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BC142712|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)
hg19_v1_chr5_+_56509900_56509957	0.0266296	SOX2.p2	NM_001127236|GPBP1|65056|GC-rich promoter binding protein 1	AL136844|GPBP1|65056|GC-rich promoter binding protein 1	AM392551|GPBP1|65056|GC-rich promoter binding protein 1	AM393442|GPBP1|65056|GC-rich promoter binding protein 1
hg19_v1_chr2_-_55277620_55277634	0.0266024	SOX2.p2	BC026788|RTN4|57142|reticulon 4
hg19_v1_chr1_-_59249687_59249784	0.0265649	SOX2.p2	BC002646|JUN|3725|jun proto-oncogene	BC068522|JUN|3725|jun proto-oncogene	NM_002228|JUN|3725|jun proto-oncogene
hg19_v1_chr8_-_95961543_95961772	0.0265434	SOX2.p2	AK315071|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	AF409114|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	AF409115|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	AK125880|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	NM_001135733|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	NM_033285|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1
hg19_v1_chr14_+_91580967_91581087	0.0265418	SOX2.p2	NM_001102367|C14orf159|80017|chromosome 14 open reading frame 159	BX248060|C14orf159|80017|chromosome 14 open reading frame 159	BC010614|C14orf159|80017|chromosome 14 open reading frame 159	AY358516|C14orf159|80017|chromosome 14 open reading frame 159
hg19_v1_chr2_-_74607425_74607481	0.0265341	SOX2.p2	AK314352|DCTN1|1639|dynactin 1	NM_001135040|DCTN1|1639|dynactin 1	NM_001190837|DCTN1|1639|dynactin 1	NM_004082|DCTN1|1639|dynactin 1
hg19_v1_chr5_+_102201526_102201535	0.0265234	SOX2.p2	BC018127|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_000919|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_001177306|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_138766|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_138821|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_138822|PAM|5066|peptidylglycine alpha-amidating monooxygenase
hg19_v1_chr1_-_150587879_150587959	0.0265053	SOX2.p2	
hg19_v1_chr12_-_118498893_118498977	0.0265051	SOX2.p2	AK310892|WSB2|55884|WD repeat and SOCS box containing 2	BC015887|WSB2|55884|WD repeat and SOCS box containing 2	AK298513|WSB2|55884|WD repeat and SOCS box containing 2	AF229181|WSB2|55884|WD repeat and SOCS box containing 2	NM_018639|WSB2|55884|WD repeat and SOCS box containing 2
hg19_v1_chr7_+_134464372_134464407	0.0265017	SOX2.p2	AK298524|CALD1|800|caldesmon 1	AK304729|CALD1|800|caldesmon 1	AF247820|CALD1|800|caldesmon 1	M83216|CALD1|800|caldesmon 1
hg19_v1_chr20_+_42194736_42194736	0.0264912	SOX2.p2	AF186470|SGK2|10110|serum/glucocorticoid regulated kinase 2	NM_016276|SGK2|10110|serum/glucocorticoid regulated kinase 2
hg19_v1_chr4_-_82392971_82392996	0.0264887	SOX2.p2	BX648337|RASGEF1B|153020|RasGEF domain family, member 1B	BC121003|RASGEF1B|153020|RasGEF domain family, member 1B	BC121004|RASGEF1B|153020|RasGEF domain family, member 1B
hg19_v1_chr11_+_118889140_118889240	0.0264829	SOX2.p2	AF078862|TRAPPC4|51399|trafficking protein particle complex 4	AF105025|TRAPPC4|51399|trafficking protein particle complex 4	AF151862|TRAPPC4|51399|trafficking protein particle complex 4	NM_016146|TRAPPC4|51399|trafficking protein particle complex 4
hg19_v1_chr14_-_71275732_71275887	0.0264568	SOX2.p2	AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9	BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9	AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9	BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9	NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9
hg19_v1_chr3_-_112359443_112359478	0.0264564	SOX2.p2	AY726593|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr19_-_53233134_53233134	0.0263637	SOX2.p2	AK097434|ZNF611|81856|zinc finger protein 611	NM_030972|ZNF611|81856|zinc finger protein 611
hg19_v1_chr2_-_55277653_55277671	0.0263534	SOX2.p2	AK075039|RTN4|57142|reticulon 4
hg19_v1_chr4_+_113218498_113218557	0.0263449	SOX2.p2	NM_001102406|ALPK1|80216|alpha-kinase 1	NM_025144|ALPK1|80216|alpha-kinase 1	AK026323|ALPK1|80216|alpha-kinase 1	AK304708|ALPK1|80216|alpha-kinase 1	AK097246|ALPK1|80216|alpha-kinase 1	BC028117|ALPK1|80216|alpha-kinase 1	AK303489|ALPK1|80216|alpha-kinase 1	BX648798|ALPK1|80216|alpha-kinase 1	BC060780|ALPK1|80216|alpha-kinase 1
hg19_v1_chr2_+_202047803_202047917	0.0263092	SOX2.p2	AK310746|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	U86214|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AK304859|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AK225475|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AY690601|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	BC042844|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	U60519|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AJ487678|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AJ487679|CASP10|843|caspase 10, apoptosis-related cysteine peptidase
hg19_v1_chr3_-_57583080_57583087	0.0262078	SOX2.p2	BC008753|ARF4|378|ADP-ribosylation factor 4
hg19_v1_chr12_-_108154924_108155079	0.0262007	SOX2.p2	BC068562|PRDM4|11108|PR domain containing 4
hg19_v1_chr8_-_30002199_30002201	0.0261592	SOX2.p2	NM_001100916|MBOAT4|619373|membrane bound O-acyltransferase domain containing 4	EU518495|MBOAT4|619373|membrane bound O-acyltransferase domain containing 4
hg19_v1_chr16_+_15528324_15528477	0.0261405	SOX2.p2	AK057180|C16orf45|89927|chromosome 16 open reading frame 45	NM_033201|C16orf45|89927|chromosome 16 open reading frame 45	AK293431|C16orf45|89927|chromosome 16 open reading frame 45	BC008967|C16orf45|89927|chromosome 16 open reading frame 45
hg19_v1_chr17_-_73258441_73258443	0.0260792	SOX2.p2	AK301895|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3	AK302278|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3	NM_001172703|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3	NM_001172704|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3
hg19_v1_chr4_-_89080010_89080065	0.0260586	SOX2.p2	BC021281|ABCG2|9429|ATP-binding cassette, sub-family G (WHITE), member 2	NM_004827|ABCG2|9429|ATP-binding cassette, sub-family G (WHITE), member 2
hg19_v1_chr17_-_63557615_63557744	0.0260287	SOX2.p2	AK315303|AXIN2|8313|axin 2	NM_004655|AXIN2|8313|axin 2
hg19_v1_chr4_-_165304406_165304406	0.0260136	SOX2.p2	AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1
hg19_v1_chrX_-_18690187_18690222	0.0259851	SOX2.p2	AF014459|RS1|6247|retinoschisin 1	DQ426892|RS1|6247|retinoschisin 1	NM_000330|RS1|6247|retinoschisin 1
hg19_v1_chr3_+_119013490_119013750	0.025956	SOX2.p2	AK293726|ARHGAP31|57514|Rho GTPase activating protein 31	BC112163|ARHGAP31|57514|Rho GTPase activating protein 31	BC112165|ARHGAP31|57514|Rho GTPase activating protein 31	HQ258543|ARHGAP31|57514|Rho GTPase activating protein 31
hg19_v1_chr1_+_183605207_183605477	0.0259256	SOX2.p2	NM_015149|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AF186780|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	BX537416|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK316526|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK295179|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK295611|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	BC136591|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1
hg19_v1_chr17_+_52978022_52978290	0.0259174	SOX2.p2	NM_005486|TOM1L1|10040|target of myb1 (chicken)-like 1	AK001893|TOM1L1|10040|target of myb1 (chicken)-like 1	AK309164|TOM1L1|10040|target of myb1 (chicken)-like 1	AK225351|TOM1L1|10040|target of myb1 (chicken)-like 1	AJ010071|TOM1L1|10040|target of myb1 (chicken)-like 1	AK303912|TOM1L1|10040|target of myb1 (chicken)-like 1	AK300823|TOM1L1|10040|target of myb1 (chicken)-like 1	AK303913|TOM1L1|10040|target of myb1 (chicken)-like 1	AK315039|TOM1L1|10040|target of myb1 (chicken)-like 1	AK315907|TOM1L1|10040|target of myb1 (chicken)-like 1	AK223125|TOM1L1|10040|target of myb1 (chicken)-like 1	BC029396|TOM1L1|10040|target of myb1 (chicken)-like 1
hg19_v1_chr3_-_149095517_149095567	0.0258661	SOX2.p2	BC034145|TM4SF1|4071|transmembrane 4 L six family member 1	AK130271|TM4SF1|4071|transmembrane 4 L six family member 1	NM_014220|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr7_-_92777657_92777684	0.0257608	SOX2.p2	AF474973|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195582|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195583|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195584|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195585|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195586|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195587|SAMD9L|219285|sterile alpha motif domain containing 9-like	DQ068177|SAMD9L|219285|sterile alpha motif domain containing 9-like	AB095926|SAMD9L|219285|sterile alpha motif domain containing 9-like	NM_152703|SAMD9L|219285|sterile alpha motif domain containing 9-like
hg19_v1_chr3_+_143692166_143692268	0.0256984	SOX2.p2	NM_001134470|C3orf58|205428|chromosome 3 open reading frame 58	AK294020|C3orf58|205428|chromosome 3 open reading frame 58
hg19_v1_chr8_+_28351694_28351837	0.0256738	SOX2.p2	NM_017412|FZD3|7976|frizzled family receptor 3	NM_145866|FZD3|7976|frizzled family receptor 3	AK291480|FZD3|7976|frizzled family receptor 3	AB039723|FZD3|7976|frizzled family receptor 3
hg19_v1_chr3_-_112359660_112359673	0.0256518	SOX2.p2	AK292881|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr8_+_86157693_86157721	0.0256425	SOX2.p2	NM_198584|CA13|377677|carbonic anhydrase XIII
hg19_v1_chr3_-_125820390_125820399	0.0256365	SOX2.p2	NM_001164475|SLC41A3|54946|solute carrier family 41, member 3	AK298070|SLC41A3|54946|solute carrier family 41, member 3
hg19_v1_chr2_-_74601653_74601861	0.0256217	SOX2.p2	AK315014|DCTN1|1639|dynactin 1	BC071583|DCTN1|1639|dynactin 1	NM_001135041|DCTN1|1639|dynactin 1	NM_023019|DCTN1|1639|dynactin 1
hg19_v1_chr2_-_55277592_55277614	0.0256151	SOX2.p2	AK129806|RTN4|57142|reticulon 4	AF132047|RTN4|57142|reticulon 4
hg19_v1_chr19_-_42463500_42463541	0.0255826	SOX2.p2	NM_006423|RABAC1|10567|Rab acceptor 1 (prenylated)
hg19_v1_chr16_+_66638632_66638650	0.0255636	SOX2.p2	AY166714|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3
hg19_v1_chr19_+_45281125_45281187	0.0255149	SOX2.p2	AF117646|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	AF117647|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	NM_001130852|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	NM_012116|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	AB028645|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	BC028915|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	DQ891243|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	DQ894493|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c
hg19_v1_chr1_+_90098643_90098648	0.025513	SOX2.p2	NM_032270|LRRC8C|84230|leucine rich repeat containing 8 family, member C
hg19_v1_chr10_-_28571014_28571066	0.0254767	SOX2.p2	BC038105|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)	AK057360|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)	NM_173496|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
hg19_v1_chr19_-_45996470_45996517	0.025426	SOX2.p2	AF004224|RTN2|6253|reticulon 2	NM_206901|RTN2|6253|reticulon 2
hg19_v1_chr22_+_38598065_38598107	0.025408	SOX2.p2	BC015037|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	AB025247|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)
hg19_v1_chr3_-_112359565_112359589	0.0253827	SOX2.p2	AB052098|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr11_+_100862719_100862810	0.0253532	SOX2.p2	AK314174|TMEM133|83935|transmembrane protein 133	AF247167|TMEM133|83935|transmembrane protein 133	NM_032021|TMEM133|83935|transmembrane protein 133
hg19_v1_chr5_-_137475076_137475131	0.0252979	SOX2.p2	U90450|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	AK312181|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	AF067724|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	BC026182|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	NM_003551|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)
hg19_v1_chr5_-_172755418_172755468	0.0252405	SOX2.p2	AK075406|STC2|8614|stanniocalcin 2	BC000658|STC2|8614|stanniocalcin 2	AK027390|STC2|8614|stanniocalcin 2	AK027663|STC2|8614|stanniocalcin 2
hg19_v1_chr2_-_172750724_172750843	0.0251945	SOX2.p2	DQ891540|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	EU176607|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK091071|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	BC016932|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AJ496568|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	Y14494|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK022828|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK294638|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	NM_003705|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12
hg19_v1_chr12_-_21810769_21810778	0.0251925	SOX2.p2	AK312328|LDHB|3945|lactate dehydrogenase B	BC015122|LDHB|3945|lactate dehydrogenase B
hg19_v1_chr17_+_43971655_43971747	0.0251888	SOX2.p2	NM_001123066|MAPT|4137|microtubule-associated protein tau	NM_001123067|MAPT|4137|microtubule-associated protein tau	NM_001203251|MAPT|4137|microtubule-associated protein tau	NM_001203252|MAPT|4137|microtubule-associated protein tau	NM_005910|MAPT|4137|microtubule-associated protein tau	NM_016834|MAPT|4137|microtubule-associated protein tau	NM_016835|MAPT|4137|microtubule-associated protein tau	NM_016841|MAPT|4137|microtubule-associated protein tau
hg19_v1_chr1_+_84647342_84647342	0.0251873	SOX2.p2	AK316115|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242862|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta
hg19_v1_chr6_-_94129059_94129307	0.0251255	SOX2.p2	BC126125|EPHA7|2045|EPH receptor A7	BC126151|EPHA7|2045|EPH receptor A7	BC143857|EPHA7|2045|EPH receptor A7	BC143858|EPHA7|2045|EPH receptor A7	L36642|EPHA7|2045|EPH receptor A7	BC027940|EPHA7|2045|EPH receptor A7	AK313529|EPHA7|2045|EPH receptor A7	AB209269|EPHA7|2045|EPH receptor A7	NM_004440|EPHA7|2045|EPH receptor A7
hg19_v1_chr18_+_29171729_29171865	0.0251091	SOX2.p2	NM_000371|TTR|7276|transthyretin	AK312051|TTR|7276|transthyretin	BC005310|TTR|7276|transthyretin	BC020791|TTR|7276|transthyretin	D00096|TTR|7276|transthyretin	GU727633|TTR|7276|transthyretin	K02091|TTR|7276|transthyretin	M10605|TTR|7276|transthyretin	X59498|TTR|7276|transthyretin	AF162690|TTR|7276|transthyretin	BT007189|TTR|7276|transthyretin	CR456908|TTR|7276|transthyretin	DQ839490|TTR|7276|transthyretin	U19780|TTR|7276|transthyretin
hg19_v1_chr11_+_20044362_20044414	0.0250676	SOX2.p2	AK298346|NAV2|89797|neuron navigator 2	AJ488208|NAV2|89797|neuron navigator 2
hg19_v1_chr3_+_140770412_140770545	0.0250402	SOX2.p2	BC051354|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4
hg19_v1_chr3_-_155421996_155421996	0.0250399	SOX2.p2	BC113950|PLCH1|23007|phospholipase C, eta 1	NM_014996|PLCH1|23007|phospholipase C, eta 1
hg19_v1_chr1_-_21377387_21377394	0.0250193	SOX2.p2	BC094683|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg19_v1_chr16_-_75529278_75529281	0.0249083	SOX2.p2	
hg19_v1_chr14_-_27066959_27067018	0.0248857	SOX2.p2	NM_002515|NOVA1|4857|neuro-oncological ventral antigen 1	NM_006489|NOVA1|4857|neuro-oncological ventral antigen 1	NM_006491|NOVA1|4857|neuro-oncological ventral antigen 1
hg19_v1_chr3_+_85775631_85775631	0.0248724	SOX2.p2	AF538973|CADM2|253559|cell adhesion molecule 2	NM_153184|CADM2|253559|cell adhesion molecule 2
hg19_v1_chr14_-_23755232_23755307	0.0248671	SOX2.p2	AB037864|HOMEZ|57594|homeobox and leucine zipper encoding	AF463523|HOMEZ|57594|homeobox and leucine zipper encoding	AK296927|HOMEZ|57594|homeobox and leucine zipper encoding
hg19_v1_chr1_-_149889362_149889446	0.0248469	SOX2.p2	AB018279|SV2A|9900|synaptic vesicle glycoprotein 2A	BC045111|SV2A|9900|synaptic vesicle glycoprotein 2A	AK291718|SV2A|9900|synaptic vesicle glycoprotein 2A	AK075480|SV2A|9900|synaptic vesicle glycoprotein 2A	BX537754|SV2A|9900|synaptic vesicle glycoprotein 2A	BC034038|SV2A|9900|synaptic vesicle glycoprotein 2A	NM_014849|SV2A|9900|synaptic vesicle glycoprotein 2A
hg19_v1_chrX_+_135251795_135251795	0.0248298	SOX2.p2	NM_001167819|FHL1|2273|four and a half LIM domains 1
hg19_v1_chr15_-_76304762_76304784	0.0248291	SOX2.p2	CR749519|NRG4|145957|neuregulin 4	AK311507|NRG4|145957|neuregulin 4	BC017568|NRG4|145957|neuregulin 4	NM_138573|NRG4|145957|neuregulin 4
hg19_v1_chr2_+_196521470_196521681	0.0248195	SOX2.p2	BC029413|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	NM_001127257|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	CR749813|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10
hg19_v1_chr16_-_11680146_11680228	0.0247942	SOX2.p2	BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor	BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor	BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor	BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor	BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor	BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor	BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor	AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor	NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor	U77396|LITAF|9516|lipopolysaccharide-induced TNF factor
hg19_v1_chr2_+_181845605_181845681	0.0247143	SOX2.p2	AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3	BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3	AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3
hg19_v1_chr1_-_84464728_84464865	0.0246687	SOX2.p2	AK126792|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC048970|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC032829|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC060878|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC028350|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	NM_024686|TTLL7|79739|tubulin tyrosine ligase-like family, member 7
hg19_v1_chr17_-_79849362_79849455	0.0246009	SOX2.p2	AF047002|THOC4|10189|THO complex 4	EU831428|THOC4|10189|THO complex 4	EU831521|THOC4|10189|THO complex 4
hg19_v1_chr20_+_19955778_19955941	0.0245427	SOX2.p2	M37190|RIN2|54453|Ras and Rab interactor 2
hg19_v1_chr11_+_10879763_10879809	0.0245272	SOX2.p2	BC014360|LOC729013|729013|uncharacterized LOC729013	BC036635|LOC729013|729013|uncharacterized LOC729013
hg19_v1_chr7_+_134464417_134464428	0.0245254	SOX2.p2	BC040354|CALD1|800|caldesmon 1
hg19_v1_chr10_-_69752385_69752431	0.0244744	SOX2.p2	AK027835|HERC4|26091|hect domain and RLD 4
hg19_v1_chr20_+_60877939_60878022	0.0244478	SOX2.p2	AK307459|ADRM1|11047|adhesion regulating molecule 1
hg19_v1_chr17_-_55980749_55980749	0.0244305	SOX2.p2	AK000746|CUEDC1|404093|CUE domain containing 1	NM_017949|CUEDC1|404093|CUE domain containing 1
hg19_v1_chr17_+_28256873_28256920	0.0243804	SOX2.p2	AK302745|EFCAB5|374786|EF-hand calcium binding domain 5	AK303060|EFCAB5|374786|EF-hand calcium binding domain 5	NM_001145053|EFCAB5|374786|EF-hand calcium binding domain 5	AK299608|EFCAB5|374786|EF-hand calcium binding domain 5
hg19_v1_chr12_-_21810733_21810752	0.0243411	SOX2.p2	AK129881|LDHB|3945|lactate dehydrogenase B
hg19_v1_chr11_-_85430117_85430210	0.0243122	SOX2.p2	BC068495|SYTL2|54843|synaptotagmin-like 2	AK298604|SYTL2|54843|synaptotagmin-like 2	AK074737|SYTL2|54843|synaptotagmin-like 2	NM_206929|SYTL2|54843|synaptotagmin-like 2	AK092121|SYTL2|54843|synaptotagmin-like 2
hg19_v1_chr11_-_75236418_75236598	0.0241861	SOX2.p2	BC090053|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5	AF318351|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5	NM_030792|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5
hg19_v1_chr1_+_19971865_19971865	0.0241628	SOX2.p2	AK313265|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1	NM_001204085|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1
hg19_v1_chr6_-_112080284_112080333	0.0241093	SOX2.p2	BC032496|FYN|2534|FYN oncogene related to SRC, FGR, YES	NM_153048|FYN|2534|FYN oncogene related to SRC, FGR, YES
hg19_v1_chr12_-_108154780_108154899	0.0241063	SOX2.p2	AK056378|PRDM4|11108|PR domain containing 4
hg19_v1_chr2_+_191301020_191301120	0.024092	SOX2.p2	AK098085|MFSD6|54842|major facilitator superfamily domain containing 6
hg19_v1_chr12_+_53442732_53442789	0.0240454	SOX2.p2	AF518728|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	NM_015319|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BC131503|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)
hg19_v1_chr2_+_204571379_204571419	0.0240345	SOX2.p2	BC093698|CD28|940|CD28 molecule	BC112085|CD28|940|CD28 molecule	AK292986|CD28|940|CD28 molecule	AF222341|CD28|940|CD28 molecule	AF222342|CD28|940|CD28 molecule	AF222343|CD28|940|CD28 molecule	AJ295273|CD28|940|CD28 molecule
hg19_v1_chr4_-_140477290_140477576	0.0240268	SOX2.p2	AF462150|SETD7|80854|SET domain containing (lysine methyltransferase) 7	BC066361|SETD7|80854|SET domain containing (lysine methyltransferase) 7	AK310856|SETD7|80854|SET domain containing (lysine methyltransferase) 7	BC121055|SETD7|80854|SET domain containing (lysine methyltransferase) 7	BC121056|SETD7|80854|SET domain containing (lysine methyltransferase) 7	AB051504|SETD7|80854|SET domain containing (lysine methyltransferase) 7	AF448510|SETD7|80854|SET domain containing (lysine methyltransferase) 7	NM_030648|SETD7|80854|SET domain containing (lysine methyltransferase) 7
hg19_v1_chr17_+_74261280_74261289	0.0239885	SOX2.p2	BC060859|FAM100B|283991|family with sequence similarity 100, member B	NM_182565|FAM100B|283991|family with sequence similarity 100, member B
hg19_v1_chr3_+_57994087_57994207	0.0239744	SOX2.p2	AF043045|FLNB|2317|filamin B, beta	NM_001164317|FLNB|2317|filamin B, beta	NM_001164318|FLNB|2317|filamin B, beta	NM_001164319|FLNB|2317|filamin B, beta	NM_001457|FLNB|2317|filamin B, beta	AB371580|FLNB|2317|filamin B, beta	AB191258|FLNB|2317|filamin B, beta	AB371581|FLNB|2317|filamin B, beta	AB371582|FLNB|2317|filamin B, beta	AF042166|FLNB|2317|filamin B, beta
hg19_v1_chr14_-_21493122_21493271	0.0239734	SOX2.p2	AK096999|NDRG2|57447|NDRG family member 2	CR749252|NDRG2|57447|NDRG family member 2	BX647748|NDRG2|57447|NDRG family member 2	AF087872|NDRG2|57447|NDRG family member 2	AK024521|NDRG2|57447|NDRG family member 2	AK090657|NDRG2|57447|NDRG family member 2	AK130029|NDRG2|57447|NDRG family member 2	AK057843|NDRG2|57447|NDRG family member 2	AK057847|NDRG2|57447|NDRG family member 2	NM_201538|NDRG2|57447|NDRG family member 2	NM_201539|NDRG2|57447|NDRG family member 2	NM_201540|NDRG2|57447|NDRG family member 2	NM_201541|NDRG2|57447|NDRG family member 2
hg19_v1_chr2_+_196521851_196521965	0.0239569	SOX2.p2	NM_020342|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AK294771|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AB033091|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AK291241|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	BC101516|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	BC112223|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	BC010371|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AL050294|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10
hg19_v1_chr13_+_24844846_24844950	0.0239491	SOX2.p2	AK297394|SPATA13|221178|spermatogenesis associated 13	AK298717|SPATA13|221178|spermatogenesis associated 13	AK123031|SPATA13|221178|spermatogenesis associated 13
hg19_v1_chr19_-_44100127_44100298	0.0239044	SOX2.p2	NM_001007561|IRGQ|126298|immunity-related GTPase family, Q
hg19_v1_chr2_-_128439359_128439359	0.0239005	SOX2.p2	NM_001161404|LIMS2|55679|LIM and senescent cell antigen-like domains 2
hg19_v1_chr2_+_202047620_202047620	0.023815	SOX2.p2	NM_001206524|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	NM_001206542|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	NM_001230|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	NM_032974|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	NM_032976|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	NM_032977|CASP10|843|caspase 10, apoptosis-related cysteine peptidase
hg19_v1_chr11_+_63706433_63706535	0.0237604	SOX2.p2	NM_024771|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	AK023910|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	AK300451|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	AK303557|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	JF263566|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	BC041617|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	BC052298|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)
hg19_v1_chr1_+_22778347_22778505	0.0237339	SOX2.p2	AB007947|ZBTB40|9923|zinc finger and BTB domain containing 40	BC114607|ZBTB40|9923|zinc finger and BTB domain containing 40
hg19_v1_chr22_-_46933066_46933162	0.0237248	SOX2.p2	AF231024|CELSR1|9620|cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)	NM_014246|CELSR1|9620|cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)
hg19_v1_chr1_-_95392501_95392780	0.0236792	SOX2.p2	S80562|CNN3|1266|calponin 3, acidic	BC025372|CNN3|1266|calponin 3, acidic	AK312370|CNN3|1266|calponin 3, acidic	AK298145|CNN3|1266|calponin 3, acidic	NM_001839|CNN3|1266|calponin 3, acidic
hg19_v1_chrX_+_106171328_106171458	0.0236666	SOX2.p2	AY358474|CLDN2|9075|claudin 2	BC014424|CLDN2|9075|claudin 2	DQ892216|CLDN2|9075|claudin 2	DQ895412|CLDN2|9075|claudin 2	AF250558|CLDN2|9075|claudin 2
hg19_v1_chr16_+_58283819_58283918	0.0236168	SOX2.p2	AK299066|CCDC113|29070|coiled-coil domain containing 113	NM_001142302|CCDC113|29070|coiled-coil domain containing 113	NM_014157|CCDC113|29070|coiled-coil domain containing 113	AK314300|CCDC113|29070|coiled-coil domain containing 113	AL136785|CCDC113|29070|coiled-coil domain containing 113	BC126445|CCDC113|29070|coiled-coil domain containing 113	BC126447|CCDC113|29070|coiled-coil domain containing 113	AF161550|CCDC113|29070|coiled-coil domain containing 113	AM392831|CCDC113|29070|coiled-coil domain containing 113	CR533506|CCDC113|29070|coiled-coil domain containing 113	HQ258203|CCDC113|29070|coiled-coil domain containing 113
hg19_v1_chr6_-_42419782_42419864	0.0235982	SOX2.p2	AF297872|TRERF1|55809|transcriptional regulating factor 1	NM_033502|TRERF1|55809|transcriptional regulating factor 1	AM404182|TRERF1|55809|transcriptional regulating factor 1	AM404183|TRERF1|55809|transcriptional regulating factor 1	AM404259|TRERF1|55809|transcriptional regulating factor 1	AK308473|TRERF1|55809|transcriptional regulating factor 1
hg19_v1_chr9_-_86082656_86082663	0.0235284	SOX2.p2	NM_001244960|FRMD3|257019|FERM domain containing 3	AY137774|FRMD3|257019|FERM domain containing 3
hg19_v1_chr1_-_168105902_168105938	0.0234474	SOX2.p2	AK298797|GPR161|23432|G protein-coupled receptor 161
hg19_v1_chr6_+_14117486_14117486	0.0233897	SOX2.p2	NM_001251901|CD83|9308|CD83 molecule
hg19_v1_chr15_-_59665065_59665067	0.0233304	SOX2.p2	AK291688|MYO1E|4643|myosin IE
hg19_v1_chr6_-_136788012_136788012	0.0233064	SOX2.p2	AK299355|MAP7|9053|microtubule-associated protein 7	NM_001198615|MAP7|9053|microtubule-associated protein 7
hg19_v1_chr1_-_110283659_110283659	0.0232867	SOX2.p2	BC008790|GSTM3|2947|glutathione S-transferase mu 3 (brain)	NM_000849|GSTM3|2947|glutathione S-transferase mu 3 (brain)
hg19_v1_chr19_+_48673936_48673971	0.0232344	SOX2.p2	BC043386|C19orf68|374920|chromosome 19 open reading frame 68
hg19_v1_chr20_-_35492069_35492200	0.0232333	SOX2.p2	NM_080627|KIAA0889|140710|KIAA0889
hg19_v1_chr22_+_31795581_31795669	0.0232024	SOX2.p2	AK315659|DRG1|4733|developmentally regulated GTP binding protein 1	BC019285|DRG1|4733|developmentally regulated GTP binding protein 1	AJ005940|DRG1|4733|developmentally regulated GTP binding protein 1	BC020803|DRG1|4733|developmentally regulated GTP binding protein 1	AF078103|DRG1|4733|developmentally regulated GTP binding protein 1	AK098576|DRG1|4733|developmentally regulated GTP binding protein 1	CR456488|DRG1|4733|developmentally regulated GTP binding protein 1	DQ890690|DRG1|4733|developmentally regulated GTP binding protein 1	DQ893872|DRG1|4733|developmentally regulated GTP binding protein 1	CU013048|DRG1|4733|developmentally regulated GTP binding protein 1	CU013336|DRG1|4733|developmentally regulated GTP binding protein 1	BT007237|DRG1|4733|developmentally regulated GTP binding protein 1	CR542059|DRG1|4733|developmentally regulated GTP binding protein 1
hg19_v1_chr7_-_92747269_92747298	0.0231886	SOX2.p2	AB095925|SAMD9|54809|sterile alpha motif domain containing 9	BC150249|SAMD9|54809|sterile alpha motif domain containing 9	AK122951|SAMD9|54809|sterile alpha motif domain containing 9	BX647072|SAMD9|54809|sterile alpha motif domain containing 9	AF453311|SAMD9|54809|sterile alpha motif domain containing 9
hg19_v1_chr4_+_184827882_184827940	0.0231435	SOX2.p2	
hg19_v1_chr8_+_42195972_42196142	0.0231418	SOX2.p2	NM_002690|POLB|5423|polymerase (DNA directed), beta	AK223537|POLB|5423|polymerase (DNA directed), beta	BC100288|POLB|5423|polymerase (DNA directed), beta	AK294025|POLB|5423|polymerase (DNA directed), beta	AK314976|POLB|5423|polymerase (DNA directed), beta	D29013|POLB|5423|polymerase (DNA directed), beta	M13140|POLB|5423|polymerase (DNA directed), beta	BC106909|POLB|5423|polymerase (DNA directed), beta	CR536503|POLB|5423|polymerase (DNA directed), beta	CR541802|POLB|5423|polymerase (DNA directed), beta	L11607|POLB|5423|polymerase (DNA directed), beta
hg19_v1_chr1_-_201475966_201475966	0.0231308	SOX2.p2	AK290133|CSRP1|1465|cysteine and glycine-rich protein 1	NM_001193571|CSRP1|1465|cysteine and glycine-rich protein 1
hg19_v1_chr4_+_123161119_123161129	0.0230856	SOX2.p2	CR936613|KIAA1109|84162|KIAA1109
hg19_v1_chr10_-_127569851_127569883	0.0230778	SOX2.p2	AK001751|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32	AY064250|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32	AF427340|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32	NM_018180|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32
hg19_v1_chr20_-_3388219_3388285	0.0230291	SOX2.p2	NM_001009984|C20orf194|25943|chromosome 20 open reading frame 194
hg19_v1_chr10_+_5005453_5005576	0.0230119	SOX2.p2	NM_001353|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)
hg19_v1_chr2_-_142889269_142889269	0.0229831	SOX2.p2	AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B	NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B
hg19_v1_chr6_-_167040700_167040736	0.0229782	SOX2.p2	BC002363|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	NM_021135|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg19_v1_chr6_-_75915566_75915745	0.022939	SOX2.p2	BC146868|COL12A1|1303|collagen, type XII, alpha 1	U73778|COL12A1|1303|collagen, type XII, alpha 1	NM_004370|COL12A1|1303|collagen, type XII, alpha 1	NM_080645|COL12A1|1303|collagen, type XII, alpha 1
hg19_v1_chr6_-_10694837_10694838	0.0229123	SOX2.p2	BC016820|C6orf52|347744|chromosome 6 open reading frame 52	NM_001145020|C6orf52|347744|chromosome 6 open reading frame 52
hg19_v1_chr14_-_21979364_21979506	0.0229085	SOX2.p2	EU446825|METTL3|56339|methyltransferase like 3	BC052244|METTL3|56339|methyltransferase like 3	AK000222|METTL3|56339|methyltransferase like 3	BC001650|METTL3|56339|methyltransferase like 3	BC003031|METTL3|56339|methyltransferase like 3	BC014427|METTL3|56339|methyltransferase like 3	NM_019852|METTL3|56339|methyltransferase like 3	AK300289|METTL3|56339|methyltransferase like 3	AK304251|METTL3|56339|methyltransferase like 3	AK304570|METTL3|56339|methyltransferase like 3
hg19_v1_chr6_+_108881010_108881037	0.0229032	SOX2.p2	NM_201559|FOXO3|2309|forkhead box O3	BC020227|FOXO3|2309|forkhead box O3	BC021224|FOXO3|2309|forkhead box O3
hg19_v1_chr10_+_18549583_18549697	0.0228733	SOX2.p2	NM_000724|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AB208917|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	U95019|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit
hg19_v1_chr3_-_112359277_112359287	0.0228615	SOX2.p2	BX647817|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr3_-_187452669_187452694	0.0228187	SOX2.p2	EU139066|BCL6|604|B-cell CLL/lymphoma 6	NM_001134738|BCL6|604|B-cell CLL/lymphoma 6
hg19_v1_chrX_+_22050920_22051130	0.0227962	SOX2.p2	NM_000444|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	U87284|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	AD000712|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	AK298030|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	BC105057|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	BC105059|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	U75645|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	U60475|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked
hg19_v1_chr9_-_134955243_134955257	0.0227927	SOX2.p2	BC119722|CRSP8P|441089|mediator complex subunit 27 pseudogene	BC119723|CRSP8P|441089|mediator complex subunit 27 pseudogene	AK298436|MED27|9442|mediator complex subunit 27	AK316345|MED27|9442|mediator complex subunit 27	BC002878|MED27|9442|mediator complex subunit 27	NM_004269|MED27|9442|mediator complex subunit 27
hg19_v1_chr7_+_94024201_94024342	0.0227826	SOX2.p2	AK297786|COL1A2|1278|collagen, type I, alpha 2	AK223175|COL1A2|1278|collagen, type I, alpha 2	AK300194|COL1A2|1278|collagen, type I, alpha 2	Z74616|COL1A2|1278|collagen, type I, alpha 2	AK226074|COL1A2|1278|collagen, type I, alpha 2	BC042586|COL1A2|1278|collagen, type I, alpha 2	BC054498|COL1A2|1278|collagen, type I, alpha 2	Y00724|COL1A2|1278|collagen, type I, alpha 2
hg19_v1_chr17_-_63557764_63557772	0.0227348	SOX2.p2	CR933657|AXIN2|8313|axin 2
hg19_v1_chr15_-_64995388_64995416	0.0227331	SOX2.p2	AF057297|OAZ2|4947|ornithine decarboxylase antizyme 2	BC063577|OAZ2|4947|ornithine decarboxylase antizyme 2	BC073877|OAZ2|4947|ornithine decarboxylase antizyme 2	BC035493|OAZ2|4947|ornithine decarboxylase antizyme 2	BC092483|OAZ2|4947|ornithine decarboxylase antizyme 2
hg19_v1_chr4_+_150999412_150999638	0.0227089	SOX2.p2	AB209181|DCLK2|166614|doublecortin-like kinase 2	NM_001040260|DCLK2|166614|doublecortin-like kinase 2	NM_001040261|DCLK2|166614|doublecortin-like kinase 2
hg19_v1_chr2_+_114674505_114674521	0.0227001	SOX2.p2	AB209353|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)
hg19_v1_chr2_-_55277672_55277693	0.0226426	SOX2.p2	AB040462|RTN4|57142|reticulon 4	AB040463|RTN4|57142|reticulon 4	AY102277|RTN4|57142|reticulon 4	AY102278|RTN4|57142|reticulon 4	AY102279|RTN4|57142|reticulon 4	BC016165|RTN4|57142|reticulon 4	BC068991|RTN4|57142|reticulon 4	BC150182|RTN4|57142|reticulon 4	BC152555|RTN4|57142|reticulon 4
hg19_v1_chr6_+_16143281_16143339	0.022605	SOX2.p2	AK026739|MYLIP|29116|myosin regulatory light chain interacting protein
hg19_v1_chr2_-_152590983_152591000	0.0226011	SOX2.p2	AK096903|NEB|4703|nebulin	AK307607|NEB|4703|nebulin	BC029384|NEB|4703|nebulin	BC012533|NEB|4703|nebulin	BC056251|NEB|4703|nebulin	BC105590|NEB|4703|nebulin	NM_001164507|NEB|4703|nebulin	NM_001164508|NEB|4703|nebulin	NM_004543|NEB|4703|nebulin
hg19_v1_chr1_+_6685209_6685278	0.0225915	SOX2.p2	NM_001195752|THAP3|90326|THAP domain containing, apoptosis associated protein 3	NM_138350|THAP3|90326|THAP domain containing, apoptosis associated protein 3	AK096217|THAP3|90326|THAP domain containing, apoptosis associated protein 3	BC022081|THAP3|90326|THAP domain containing, apoptosis associated protein 3	DQ891670|THAP3|90326|THAP domain containing, apoptosis associated protein 3	DQ894856|THAP3|90326|THAP domain containing, apoptosis associated protein 3
hg19_v1_chr7_+_26191732_26192135	0.0225894	SOX2.p2	NM_004289|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3	BC068455|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3	AF133059|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3	AF134891|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3
hg19_v1_chr16_-_75299713_75299938	0.022558	SOX2.p2	AK302617|BCAR1|9564|breast cancer anti-estrogen resistance 1	NM_001170720|BCAR1|9564|breast cancer anti-estrogen resistance 1	AK027608|BCAR1|9564|breast cancer anti-estrogen resistance 1	AK293808|BCAR1|9564|breast cancer anti-estrogen resistance 1	NM_001170714|BCAR1|9564|breast cancer anti-estrogen resistance 1	NM_001170718|BCAR1|9564|breast cancer anti-estrogen resistance 1
hg19_v1_chr15_-_64995459_64995479	0.0225522	SOX2.p2	BC047755|OAZ2|4947|ornithine decarboxylase antizyme 2	NM_002537|OAZ2|4947|ornithine decarboxylase antizyme 2
hg19_v1_chr2_-_86116016_86116156	0.0224827	SOX2.p2	AY359105|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AF119415|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AF344831|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	BC065936|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AK001340|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AB018356|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	NM_003896|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5
hg19_v1_chr5_+_40841296_40841589	0.0224613	SOX2.p2	AF356193|CARD6|84674|caspase recruitment domain family, member 6	AY196783|CARD6|84674|caspase recruitment domain family, member 6	NM_032587|CARD6|84674|caspase recruitment domain family, member 6	BC093825|CARD6|84674|caspase recruitment domain family, member 6	AK304349|CARD6|84674|caspase recruitment domain family, member 6	AB209844|CARD6|84674|caspase recruitment domain family, member 6
hg19_v1_chr11_+_57529233_57529445	0.0223658	SOX2.p2	NM_001085458|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085459|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085460|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085461|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085462|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085463|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085464|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085465|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085466|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085467|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085468|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085469|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206883|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206884|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206885|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206886|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206887|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206888|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206889|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206890|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206891|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001331|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062317|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062318|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062319|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062320|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062321|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062322|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062323|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062324|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062325|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062326|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062327|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062328|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062329|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062330|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062331|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062332|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062333|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062334|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062335|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062336|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062337|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062338|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062339|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062340|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062341|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062342|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062343|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062344|CTNND1|1500|catenin (cadherin-associated protein), delta 1	BC075795|CTNND1|1500|catenin (cadherin-associated protein), delta 1
hg19_v1_chr3_+_136676706_136676955	0.0223241	SOX2.p2	AY358305|IL20RB|53833|interleukin 20 receptor beta	NM_144717|IL20RB|53833|interleukin 20 receptor beta	AK316084|IL20RB|53833|interleukin 20 receptor beta	AK296832|IL20RB|53833|interleukin 20 receptor beta	BC063696|IL20RB|53833|interleukin 20 receptor beta	BC033292|IL20RB|53833|interleukin 20 receptor beta
hg19_v1_chr3_-_114343052_114343052	0.0221889	SOX2.p2	BC029041|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164347|ZBTB20|26137|zinc finger and BTB domain containing 20
hg19_v1_chr11_+_100557851_100558406	0.0221769	SOX2.p2	NM_152432|ARHGAP42|143872|Rho GTPase activating protein 42
hg19_v1_chr14_+_23305907_23305912	0.0221567	SOX2.p2	X83535|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)
hg19_v1_chr5_-_95158465_95158576	0.0221261	SOX2.p2	NM_001118890|GLRX|2745|glutaredoxin (thioltransferase)	NM_001243658|GLRX|2745|glutaredoxin (thioltransferase)	NM_001243659|GLRX|2745|glutaredoxin (thioltransferase)	NM_002064|GLRX|2745|glutaredoxin (thioltransferase)
hg19_v1_chr1_-_102462789_102462792	0.0220687	SOX2.p2	NM_058170|OLFM3|118427|olfactomedin 3
hg19_v1_chr7_-_150924220_150924330	0.0220508	SOX2.p2	BC001661|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	AF261092|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	AF261091|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	NM_005692|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	NM_007189|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2
hg19_v1_chr1_-_216978708_216978708	0.0220373	SOX2.p2	AY388461|ESRRG|2104|estrogen-related receptor gamma	NM_001243514|ESRRG|2104|estrogen-related receptor gamma
hg19_v1_chr19_+_2977480_2977652	0.0219904	SOX2.p2	NM_001143986|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	NM_024760|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	AK024071|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	BC013986|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	BC020206|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	BC007329|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	BC068052|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)
hg19_v1_chr4_+_184827805_184827836	0.0219823	SOX2.p2	AK289840|STOX2|56977|storkhead box 2
hg19_v1_chr20_+_306205_306268	0.0218655	SOX2.p2	BC067361|SOX12|6666|SRY (sex determining region Y)-box 12	NM_006943|SOX12|6666|SRY (sex determining region Y)-box 12	U35612|SOX12|6666|SRY (sex determining region Y)-box 12	BC028103|SOX12|6666|SRY (sex determining region Y)-box 12
hg19_v1_chr4_-_70505359_70505359	0.0218324	SOX2.p2	FJ664272|UGT2A2|574537|UDP glucuronosyltransferase 2 family, polypeptide A2	FJ664273|UGT2A2|574537|UDP glucuronosyltransferase 2 family, polypeptide A2	NM_001105677|UGT2A2|574537|UDP glucuronosyltransferase 2 family, polypeptide A2
hg19_v1_chr20_+_35974458_35974556	0.0218038	SOX2.p2	NM_198291|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)	Z18364|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)
hg19_v1_chr4_-_75719686_75719881	0.0218032	SOX2.p2	BC011618|BTC|685|betacellulin	S55606|BTC|685|betacellulin	AB109441|BTC|685|betacellulin	NM_001729|BTC|685|betacellulin
hg19_v1_chr16_-_89349696_89350452	0.0217805	SOX2.p2	AF130076|ANKRD11|29123|ankyrin repeat domain 11	BC058001|ANKRD11|29123|ankyrin repeat domain 11	AK057803|ANKRD11|29123|ankyrin repeat domain 11
hg19_v1_chr5_+_140501579_140501580	0.0217801	SOX2.p2	AF152497|PCDHB4|56131|protocadherin beta 4	AF217754|PCDHB4|56131|protocadherin beta 4	BC098139|PCDHB4|56131|protocadherin beta 4	BC098346|PCDHB4|56131|protocadherin beta 4	NM_018938|PCDHB4|56131|protocadherin beta 4
hg19_v1_chr19_-_40324747_40324849	0.0216641	SOX2.p2	AF205861|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	BC025291|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	AK074971|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	BC009688|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	AK302127|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	BC018751|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	NM_004714|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	NM_006483|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	NM_006484|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	Y17999|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B
hg19_v1_chr14_+_75894919_75895107	0.0216414	SOX2.p2	NM_001135048|JDP2|122953|Jun dimerization protein 2	BC068196|JDP2|122953|Jun dimerization protein 2	NM_130469|JDP2|122953|Jun dimerization protein 2
hg19_v1_chr12_-_121734474_121734541	0.0216351	SOX2.p2	BC026060|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	AF140507|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	AF425668|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	AK300865|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta
hg19_v1_chr7_+_116660291_116660440	0.0215601	SOX2.p2	AY009152|ST7|7982|suppression of tumorigenicity 7	AY009153|ST7|7982|suppression of tumorigenicity 7	AK297510|ST7|7982|suppression of tumorigenicity 7
hg19_v1_chr17_-_56494930_56494959	0.021533	SOX2.p2	NM_017763|RNF43|54894|ring finger protein 43	CR627423|RNF43|54894|ring finger protein 43
hg19_v1_chr16_+_30419363_30419476	0.0214993	SOX2.p2	AF242768|ZNF771|51333|zinc finger protein 771
hg19_v1_chr2_-_216249682_216249693	0.0214707	SOX2.p2	U42458|FN1|2335|fibronectin 1
hg19_v1_chr10_-_79628870_79628948	0.0214553	SOX2.p2	BC117695|DLG5|9231|discs, large homolog 5 (Drosophila)
hg19_v1_chr2_-_216246961_216247047	0.0214247	SOX2.p2	M14059|FN1|2335|fibronectin 1	M10905|FN1|2335|fibronectin 1
hg19_v1_chr18_-_48723689_48723736	0.021414	SOX2.p2	AY950679|MEX3C|51320|mex-3 homolog C (C. elegans)
hg19_v1_chr11_+_111807857_111807960	0.0213704	SOX2.p2	DQ642016|DIXDC1|85458|DIX domain containing 1	NM_001037954|DIXDC1|85458|DIX domain containing 1
hg19_v1_chr7_-_150721551_150721585	0.0213396	SOX2.p2	BC128587|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)	AK096734|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)	AY515311|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)	NM_173681|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)
hg19_v1_chr11_-_77184549_77185116	0.0213127	SOX2.p2	U51120|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	BC050377|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	BC109298|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	BC109299|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	AK293098|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	U24152|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	NM_001128620|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	NM_002576|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1
hg19_v1_chr15_+_67430358_67430358	0.0212919	SOX2.p2	AK298139|SMAD3|4088|SMAD family member 3	NM_001145103|SMAD3|4088|SMAD family member 3
hg19_v1_chr12_+_5603297_5603380	0.0212852	SOX2.p2	BC069773|NTF3|4908|neurotrophin 3	NM_002527|NTF3|4908|neurotrophin 3	BC107075|NTF3|4908|neurotrophin 3	CR541906|NTF3|4908|neurotrophin 3
hg19_v1_chrX_-_117119282_117119375	0.0212182	SOX2.p2	AK296324|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168299|KLHL13|90293|kelch-like 13 (Drosophila)
hg19_v1_chr17_-_42992852_42992919	0.0212095	SOX2.p2	BC062609|GFAP|2670|glial fibrillary acidic protein	J04569|GFAP|2670|glial fibrillary acidic protein	BC013596|GFAP|2670|glial fibrillary acidic protein	AF419299|GFAP|2670|glial fibrillary acidic protein	BC041765|GFAP|2670|glial fibrillary acidic protein	AK128790|GFAP|2670|glial fibrillary acidic protein	AK098380|GFAP|2670|glial fibrillary acidic protein	AK098758|GFAP|2670|glial fibrillary acidic protein	AK222683|GFAP|2670|glial fibrillary acidic protein	AK295734|GFAP|2670|glial fibrillary acidic protein	AK296259|GFAP|2670|glial fibrillary acidic protein	AK303728|GFAP|2670|glial fibrillary acidic protein	S40719|GFAP|2670|glial fibrillary acidic protein	AK315398|GFAP|2670|glial fibrillary acidic protein	NM_001131019|GFAP|2670|glial fibrillary acidic protein	NM_001242376|GFAP|2670|glial fibrillary acidic protein	NM_002055|GFAP|2670|glial fibrillary acidic protein
hg19_v1_chr1_-_153606567_153606567	0.021193	SOX2.p2	NM_001024210|S100A13|6284|S100 calcium binding protein A13
hg19_v1_chr2_-_133429069_133429151	0.0211432	SOX2.p2	NM_001077427|LYPD1|116372|LY6/PLAUR domain containing 1	AK309668|LYPD1|116372|LY6/PLAUR domain containing 1
hg19_v1_chr17_+_26699053_26699064	0.0211402	SOX2.p2	AY444166|SARM1|23098|sterile alpha and TIR motif containing 1
hg19_v1_chr11_-_61734896_61735059	0.0211187	SOX2.p2	DQ891113|FTH1|2495|ferritin, heavy polypeptide 1	DQ894293|FTH1|2495|ferritin, heavy polypeptide 1	AF088851|FTH1|2495|ferritin, heavy polypeptide 1	M12937|FTH1|2495|ferritin, heavy polypeptide 1	BC015156|FTH1|2495|ferritin, heavy polypeptide 1	M11146|FTH1|2495|ferritin, heavy polypeptide 1	X00318|FTH1|2495|ferritin, heavy polypeptide 1	M97164|FTH1|2495|ferritin, heavy polypeptide 1	BC016857|FTH1|2495|ferritin, heavy polypeptide 1	BC001399|FTH1|2495|ferritin, heavy polypeptide 1
hg19_v1_chr3_-_149375584_149375887	0.021094	SOX2.p2	AJ299431|WWTR1|25937|WW domain containing transcription regulator 1	BC014052|WWTR1|25937|WW domain containing transcription regulator 1	NM_001168280|WWTR1|25937|WW domain containing transcription regulator 1	NM_015472|WWTR1|25937|WW domain containing transcription regulator 1
hg19_v1_chr1_+_19972259_19972259	0.021055	SOX2.p2	AK309257|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1	NM_001204086|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1
hg19_v1_chrX_-_73834410_73834424	0.0210232	SOX2.p2	AF155109|RLIM|51132|ring finger protein, LIM domain interacting	BC013357|RLIM|51132|ring finger protein, LIM domain interacting
hg19_v1_chr3_-_112359251_112359260	0.0209975	SOX2.p2	AL833034|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr18_-_48724031_48724050	0.0209888	SOX2.p2	NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)
hg19_v1_chr1_-_249120063_249120153	0.0209852	SOX2.p2	AY358453|SH3BP5L|80851|SH3-binding domain protein 5-like	AK056382|SH3BP5L|80851|SH3-binding domain protein 5-like	NM_030645|SH3BP5L|80851|SH3-binding domain protein 5-like
hg19_v1_chr12_-_105478218_105478412	0.0209381	SOX2.p2	EU832777|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	GQ129303|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	AK095827|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	AK300373|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	BC103934|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	BC103935|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	NM_001034173|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2
hg19_v1_chr3_+_194407412_194407594	0.020914	SOX2.p2	BC039689|FAM43A|131583|family with sequence similarity 43, member A	AK074503|FAM43A|131583|family with sequence similarity 43, member A
hg19_v1_chr4_+_81118639_81118670	0.020901	SOX2.p2	NM_001099403|PRDM8|56978|PR domain containing 8	BC071584|PRDM8|56978|PR domain containing 8	AK292137|PRDM8|56978|PR domain containing 8	BC027929|PRDM8|56978|PR domain containing 8
hg19_v1_chr17_-_47755340_47755524	0.0209004	SOX2.p2	BC003385|SPOP|8405|speckle-type POZ protein	AK222589|SPOP|8405|speckle-type POZ protein	AK312691|SPOP|8405|speckle-type POZ protein	AJ000644|SPOP|8405|speckle-type POZ protein	AK303268|SPOP|8405|speckle-type POZ protein	AK316366|SPOP|8405|speckle-type POZ protein	BC001269|SPOP|8405|speckle-type POZ protein	AK293587|SPOP|8405|speckle-type POZ protein	AK300616|SPOP|8405|speckle-type POZ protein	NM_001007226|SPOP|8405|speckle-type POZ protein	NM_001007227|SPOP|8405|speckle-type POZ protein	NM_001007228|SPOP|8405|speckle-type POZ protein	NM_001007229|SPOP|8405|speckle-type POZ protein	NM_001007230|SPOP|8405|speckle-type POZ protein	NM_003563|SPOP|8405|speckle-type POZ protein
hg19_v1_chr15_+_52311438_52311484	0.0208993	SOX2.p2	BC035492|MAPK6|5597|mitogen-activated protein kinase 6
hg19_v1_chr11_+_67007488_67007678	0.0208755	SOX2.p2	AB490246|KDM2A|22992|lysine (K)-specific demethylase 2A	AK299725|KDM2A|22992|lysine (K)-specific demethylase 2A
hg19_v1_chr9_-_34612075_34612109	0.0207958	SOX2.p2	BC032136|C9orf23|138716|chromosome 9 open reading frame 23	NM_148178|C9orf23|138716|chromosome 9 open reading frame 23	NM_148179|C9orf23|138716|chromosome 9 open reading frame 23
hg19_v1_chrX_-_73834460_73834469	0.0207854	SOX2.p2	NM_016120|RLIM|51132|ring finger protein, LIM domain interacting	NM_183353|RLIM|51132|ring finger protein, LIM domain interacting
hg19_v1_chr2_-_192711923_192712020	0.0207223	SOX2.p2	AK290378|SDPR|8436|serum deprivation response	NM_004657|SDPR|8436|serum deprivation response
hg19_v1_chr11_+_747449_747483	0.0207048	SOX2.p2	AK295537|TALDO1|6888|transaldolase 1	AK313427|TALDO1|6888|transaldolase 1	BC018847|TALDO1|6888|transaldolase 1
hg19_v1_chr19_+_1026582_1026598	0.0206561	SOX2.p2	AK295271|CNN2|1265|calponin 2
hg19_v1_chr2_+_70142236_70142265	0.0206528	SOX2.p2	AK301088|MXD1|4084|MAX dimerization protein 1	AK312734|MXD1|4084|MAX dimerization protein 1
hg19_v1_chr17_-_56492938_56493134	0.020644	SOX2.p2	AK296769|RNF43|54894|ring finger protein 43	AK000322|RNF43|54894|ring finger protein 43	BC109028|RNF43|54894|ring finger protein 43
hg19_v1_chr17_-_43510204_43510250	0.0206221	SOX2.p2	AK290650|ARHGAP27|201176|Rho GTPase activating protein 27
hg19_v1_chr17_-_79849457_79849461	0.0205763	SOX2.p2	BC052302|THOC4|10189|THO complex 4	NM_005782|THOC4|10189|THO complex 4
hg19_v1_chr2_-_55277698_55277733	0.02056	SOX2.p2	AY123246|RTN4|57142|reticulon 4	NM_020532|RTN4|57142|reticulon 4	NM_153828|RTN4|57142|reticulon 4	NM_207520|RTN4|57142|reticulon 4
hg19_v1_chr14_+_37131064_37131105	0.0205014	SOX2.p2	BC001159|PAX9|5083|paired box 9
hg19_v1_chr11_-_118084073_118084073	0.0204835	SOX2.p2	AK094399|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	NM_153206|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1
hg19_v1_chr12_-_46766563_46766644	0.0204489	SOX2.p2	NM_018976|SLC38A2|54407|solute carrier family 38, member 2
hg19_v1_chr14_-_24036939_24037064	0.0204317	SOX2.p2	BX161425|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit	AB015318|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit	AK307696|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit	AK309103|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit
hg19_v1_chr1_-_149814264_149814317	0.0204178	SOX2.p2	BC096705|HIST2H2AA3|8337|histone cluster 2, H2aa3	BC096739|HIST2H2AA3|8337|histone cluster 2, H2aa3	BC098171|HIST2H2AA3|8337|histone cluster 2, H2aa3	CR536525|HIST2H2AA3|8337|histone cluster 2, H2aa3	CR541872|HIST2H2AA3|8337|histone cluster 2, H2aa3	EU831480|HIST2H2AA4|723790|histone cluster 2, H2aa4	EU831567|HIST2H2AA4|723790|histone cluster 2, H2aa4	BC001629|HIST2H2AA3|8337|histone cluster 2, H2aa3	BC019308|HIST2H2AA3|8337|histone cluster 2, H2aa3	AK312163|HIST2H2AA3|8337|histone cluster 2, H2aa3	L19779|HIST2H2AA3|8337|histone cluster 2, H2aa3	NM_001040874|HIST2H2AA4|723790|histone cluster 2, H2aa4	NM_003516|HIST2H2AA3|8337|histone cluster 2, H2aa3
hg19_v1_chr19_+_9434447_9434447	0.0203363	SOX2.p2	NM_001202406|ZNF559|84527|zinc finger protein 559	NM_001202407|ZNF559|84527|zinc finger protein 559	NM_001202408|ZNF559|84527|zinc finger protein 559	NM_001202409|ZNF559|84527|zinc finger protein 559	NM_001202410|ZNF559|84527|zinc finger protein 559	NM_001202411|ZNF559|84527|zinc finger protein 559	NM_032497|ZNF559|84527|zinc finger protein 559
hg19_v1_chr10_+_104535887_104536023	0.0202981	SOX2.p2	NM_017787|C10orf26|54838|chromosome 10 open reading frame 26	AY656171|C10orf26|54838|chromosome 10 open reading frame 26	AK056285|C10orf26|54838|chromosome 10 open reading frame 26	BC113857|C10orf26|54838|chromosome 10 open reading frame 26	BC114465|C10orf26|54838|chromosome 10 open reading frame 26
hg19_v1_chr14_+_64971504_64971542	0.0202841	SOX2.p2	AK291743|ZBTB1|22890|zinc finger and BTB domain containing 1
hg19_v1_chr11_-_85425790_85425790	0.0202385	SOX2.p2	NM_032379|SYTL2|54843|synaptotagmin-like 2
hg19_v1_chr1_+_43000559_43000559	0.0202307	SOX2.p2	NM_001080850|CCDC30|728621|coiled-coil domain containing 30
hg19_v1_chr2_-_197457250_197457334	0.0202254	SOX2.p2	BC117194|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	BC117198|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	AB037722|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	NM_020760|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
hg19_v1_chrX_+_12994286_12994400	0.0202066	SOX2.p2	BC104464|TMSB4X|7114|thymosin beta 4, X-linked	BC104465|TMSB4X|7114|thymosin beta 4, X-linked	BT007090|TMSB4X|7114|thymosin beta 4, X-linked	X02493|TMSB4X|7114|thymosin beta 4, X-linked
hg19_v1_chr8_-_23261626_23261631	0.0201683	SOX2.p2	U89942|LOXL2|4017|lysyl oxidase-like 2
hg19_v1_chr11_-_62475060_62475178	0.0201633	SOX2.p2	NM_001122955|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)
hg19_v1_chr11_-_119234628_119234857	0.0201603	SOX2.p2	AF079564|USP2|9099|ubiquitin specific peptidase 2	AK301805|USP2|9099|ubiquitin specific peptidase 2	AK292255|USP2|9099|ubiquitin specific peptidase 2
hg19_v1_chr15_+_52311408_52311431	0.0201582	SOX2.p2	NM_002748|MAPK6|5597|mitogen-activated protein kinase 6
hg19_v1_chr20_+_34203746_34203925	0.0201354	SOX2.p2	AF262992|SPAG4|6676|sperm associated antigen 4	NM_003116|SPAG4|6676|sperm associated antigen 4	BC143783|SPAG4|6676|sperm associated antigen 4
hg19_v1_chr12_+_50869531_50869643	0.0201201	SOX2.p2	AF131755|LARP4|113251|La ribonucleoprotein domain family, member 4
hg19_v1_chr17_-_9479124_9479138	0.0201076	SOX2.p2	BT007319|STX8|9482|syntaxin 8	DQ890985|STX8|9482|syntaxin 8	DQ894161|STX8|9482|syntaxin 8
hg19_v1_chr9_+_15422875_15422949	0.0200959	SOX2.p2	EU446705|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	BC014985|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa
hg19_v1_chr19_-_10613266_10613611	0.0200115	SOX2.p2	BC002930|KEAP1|9817|kelch-like ECH-associated protein 1	AF361886|KEAP1|9817|kelch-like ECH-associated protein 1	D50922|KEAP1|9817|kelch-like ECH-associated protein 1	NM_012289|KEAP1|9817|kelch-like ECH-associated protein 1
hg19_v1_chr3_+_183353355_183353445	0.0199778	SOX2.p2	BC142993|KLHL24|54800|kelch-like 24 (Drosophila)	AK026326|KLHL24|54800|kelch-like 24 (Drosophila)	AY422472|KLHL24|54800|kelch-like 24 (Drosophila)	BX648466|KLHL24|54800|kelch-like 24 (Drosophila)	BX648812|KLHL24|54800|kelch-like 24 (Drosophila)	NM_017644|KLHL24|54800|kelch-like 24 (Drosophila)
hg19_v1_chr10_+_35464514_35464549	0.019976	SOX2.p2	NM_182769|CREM|1390|cAMP responsive element modulator	NM_182770|CREM|1390|cAMP responsive element modulator	AF417233|CREM|1390|cAMP responsive element modulator	AY292864|CREM|1390|cAMP responsive element modulator	BC090051|CREM|1390|cAMP responsive element modulator	AK301906|CREM|1390|cAMP responsive element modulator
hg19_v1_chr19_-_2717272_2717427	0.019973	SOX2.p2	AK124445|DIRAS1|148252|DIRAS family, GTP-binding RAS-like 1
hg19_v1_chr7_+_129015483_129015483	0.019919	SOX2.p2	AK316073|AHCYL2|23382|adenosylhomocysteinase-like 2	NM_001130722|AHCYL2|23382|adenosylhomocysteinase-like 2
hg19_v1_chr17_-_41739261_41739289	0.0199034	SOX2.p2	NM_001040002|MEOX1|4222|mesenchyme homeobox 1	AK291139|MEOX1|4222|mesenchyme homeobox 1
hg19_v1_chr14_-_61190458_61190851	0.0198888	SOX2.p2	AF032107|SIX4|51804|SIX homeobox 4	BC098135|SIX4|51804|SIX homeobox 4	BC098282|SIX4|51804|SIX homeobox 4	BC099722|SIX4|51804|SIX homeobox 4	BC101934|SIX4|51804|SIX homeobox 4	EU446619|SIX4|51804|SIX homeobox 4	EU446844|SIX4|51804|SIX homeobox 4	NM_017420|SIX4|51804|SIX homeobox 4
hg19_v1_chr5_-_77844975_77845071	0.0197726	SOX2.p2	CR936660|LHFPL2|10184|lipoma HMGIC fusion partner-like 2
hg19_v1_chr20_+_60878024_60878046	0.0197678	SOX2.p2	NM_007002|ADRM1|11047|adhesion regulating molecule 1	NM_175573|ADRM1|11047|adhesion regulating molecule 1
hg19_v1_chr4_+_41540187_41540224	0.0197575	SOX2.p2	BC023546|LIMCH1|22998|LIM and calponin homology domains 1
hg19_v1_chr1_-_114354864_114354899	0.0197455	SOX2.p2	CR627402|RSBN1|54665|round spermatid basic protein 1
hg19_v1_chr3_-_45267620_45267797	0.0196964	SOX2.p2	AB078417|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	AF438313|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	BC057390|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)
hg19_v1_chr12_-_81763127_81763192	0.0196924	SOX2.p2	AK123372|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	AK296380|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	NM_001220479|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	NM_001220480|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
hg19_v1_chr1_+_221052845_221052984	0.0196152	SOX2.p2	AK127923|HLX|3142|H2.0-like homeobox	AK313298|HLX|3142|H2.0-like homeobox	BC033808|HLX|3142|H2.0-like homeobox
hg19_v1_chr19_-_6767417_6767598	0.0195987	SOX2.p2	AK225386|SH2D3A|10045|SH2 domain containing 3A	AK292781|SH2D3A|10045|SH2 domain containing 3A	AK299406|SH2D3A|10045|SH2 domain containing 3A	AK310659|SH2D3A|10045|SH2 domain containing 3A	BC006281|SH2D3A|10045|SH2 domain containing 3A	AF124249|SH2D3A|10045|SH2 domain containing 3A	AY358406|SH2D3A|10045|SH2 domain containing 3A	NM_005490|SH2D3A|10045|SH2 domain containing 3A	AK290293|SH2D3A|10045|SH2 domain containing 3A
hg19_v1_chr12_+_53491417_53491438	0.0195068	SOX2.p2	NM_002178|IGFBP6|3489|insulin-like growth factor binding protein 6	BC010162|IGFBP6|3489|insulin-like growth factor binding protein 6
hg19_v1_chrX_+_134124967_134124967	0.0194933	SOX2.p2	BC008642|CXorf69|644538|chromosome X open reading frame 69	NM_001163438|CXorf69|644538|chromosome X open reading frame 69
hg19_v1_chr12_-_122985471_122985566	0.0194698	SOX2.p2	AK027702|ZCCHC8|55596|zinc finger, CCHC domain containing 8	AK074638|ZCCHC8|55596|zinc finger, CCHC domain containing 8	NM_017612|ZCCHC8|55596|zinc finger, CCHC domain containing 8
hg19_v1_chr12_+_64237381_64238072	0.0194254	SOX2.p2	
hg19_v1_chr2_+_70142303_70142462	0.0193441	SOX2.p2	L06895|MXD1|4084|MAX dimerization protein 1	BC113531|MXD1|4084|MAX dimerization protein 1	BC117260|MXD1|4084|MAX dimerization protein 1	BC143831|MXD1|4084|MAX dimerization protein 1	BC143832|MXD1|4084|MAX dimerization protein 1	BC144601|MXD1|4084|MAX dimerization protein 1	BC069377|MXD1|4084|MAX dimerization protein 1	BC069433|MXD1|4084|MAX dimerization protein 1	CR536495|MXD1|4084|MAX dimerization protein 1	CR541692|MXD1|4084|MAX dimerization protein 1	HQ258749|MXD1|4084|MAX dimerization protein 1
hg19_v1_chr19_+_5032899_5032900	0.0193299	SOX2.p2	
hg19_v1_chr7_-_107770785_107770800	0.0193012	SOX2.p2	BC142619|LAMB4|22798|laminin, beta 4	BC140804|LAMB4|22798|laminin, beta 4	BC144591|LAMB4|22798|laminin, beta 4	AF028816|LAMB4|22798|laminin, beta 4	AK300385|LAMB4|22798|laminin, beta 4	NM_007356|LAMB4|22798|laminin, beta 4
hg19_v1_chr2_-_100721792_100722044	0.019289	SOX2.p2	NM_001025108|AFF3|3899|AF4/FMR2 family, member 3
hg19_v1_chr16_-_11680756_11680823	0.0192325	SOX2.p2	BC039840|LITAF|9516|lipopolysaccharide-induced TNF factor	BC016491|LITAF|9516|lipopolysaccharide-induced TNF factor	BC008309|LITAF|9516|lipopolysaccharide-induced TNF factor	BC065293|LITAF|9516|lipopolysaccharide-induced TNF factor	BC000053|LITAF|9516|lipopolysaccharide-induced TNF factor	AK095955|LITAF|9516|lipopolysaccharide-induced TNF factor	AK130788|LITAF|9516|lipopolysaccharide-induced TNF factor	AK314519|LITAF|9516|lipopolysaccharide-induced TNF factor	NM_001136472|LITAF|9516|lipopolysaccharide-induced TNF factor	NM_001136473|LITAF|9516|lipopolysaccharide-induced TNF factor
hg19_v1_chr1_+_221052735_221052788	0.0191363	SOX2.p2	AK056326|HLX|3142|H2.0-like homeobox	NM_021958|HLX|3142|H2.0-like homeobox	BC007294|HLX|3142|H2.0-like homeobox	AB208812|HLX|3142|H2.0-like homeobox	M60721|HLX|3142|H2.0-like homeobox
hg19_v1_chr7_-_143892649_143892790	0.0191191	SOX2.p2	BC136868|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35	BC136878|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35	EF560743|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35	AK125680|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35	NM_001003702|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35
hg19_v1_chr9_-_34620489_34620497	0.0191056	SOX2.p2	NM_007234|DCTN3|11258|dynactin 3 (p22)	NM_024348|DCTN3|11258|dynactin 3 (p22)
hg19_v1_chr12_-_122985396_122985458	0.0190763	SOX2.p2	BC065918|ZCCHC8|55596|zinc finger, CCHC domain containing 8
hg19_v1_chr19_+_11998609_11998738	0.0190698	SOX2.p2	BC051309|ZNF69|7620|zinc finger protein 69	NM_021915|ZNF69|7620|zinc finger protein 69	EU446913|ZNF69|7620|zinc finger protein 69
hg19_v1_chr17_-_37353731_37353979	0.0190533	SOX2.p2	DQ891688|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	EU176608|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	AY393857|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	L06111|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	L06112|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	M76560|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	BC037311|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	AB054985|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	M92301|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	M92302|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	M92303|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	AK289729|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	AK297643|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	AK312385|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	NM_000723|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	NM_199247|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	NM_199248|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit
hg19_v1_chr13_+_113633625_113633654	0.0190372	SOX2.p2	AK307867|MCF2L|23263|MCF.2 cell line derived transforming sequence-like
hg19_v1_chr2_+_33359607_33359804	0.019016	SOX2.p2	NM_000627|LTBP1|4052|latent transforming growth factor beta binding protein 1	NM_001166264|LTBP1|4052|latent transforming growth factor beta binding protein 1	NM_001166265|LTBP1|4052|latent transforming growth factor beta binding protein 1	NM_001166266|LTBP1|4052|latent transforming growth factor beta binding protein 1	AB208801|LTBP1|4052|latent transforming growth factor beta binding protein 1	BC130289|LTBP1|4052|latent transforming growth factor beta binding protein 1	BC144127|LTBP1|4052|latent transforming growth factor beta binding protein 1	BC144128|LTBP1|4052|latent transforming growth factor beta binding protein 1	M34057|LTBP1|4052|latent transforming growth factor beta binding protein 1	AF489528|LTBP1|4052|latent transforming growth factor beta binding protein 1
hg19_v1_chr15_+_67358194_67358609	0.0189878	SOX2.p2	NM_005902|SMAD3|4088|SMAD family member 3	BC050743|SMAD3|4088|SMAD family member 3	U68019|SMAD3|4088|SMAD family member 3	U76622|SMAD3|4088|SMAD family member 3	EU446487|SMAD3|4088|SMAD family member 3	AB209616|SMAD3|4088|SMAD family member 3
hg19_v1_chr9_+_140083053_140083199	0.0189793	SOX2.p2	NM_003731|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	BC000864|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	BC004118|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	Z96932|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	BT006766|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	CR542238|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	BC015827|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1
hg19_v1_chr5_+_170846659_170846666	0.0189666	SOX2.p2	AY358811|FGF18|8817|fibroblast growth factor 18	AF075292|FGF18|8817|fibroblast growth factor 18	NM_003862|FGF18|8817|fibroblast growth factor 18
hg19_v1_chr6_-_10415438_10415499	0.0189298	SOX2.p2	BC071713|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	NM_003220|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
hg19_v1_chr20_+_35234077_35234143	0.0189124	SOX2.p2	NM_001199534|C20orf24|55969|chromosome 20 open reading frame 24	NM_018840|C20orf24|55969|chromosome 20 open reading frame 24	NM_199483|C20orf24|55969|chromosome 20 open reading frame 24
hg19_v1_chr19_-_1111972_1112003	0.0189022	SOX2.p2	BC106021|SBNO2|22904|strawberry notch homolog 2 (Drosophila)
hg19_v1_chr3_-_12586962_12586962	0.0188838	SOX2.p2	NM_001195279|LOC100129480|100129480|uncharacterized LOC100129480
hg19_v1_chr2_-_159312955_159313264	0.0188535	SOX2.p2	BC105928|CCDC148|130940|coiled-coil domain containing 148	BC107596|CCDC148|130940|coiled-coil domain containing 148	BC107597|CCDC148|130940|coiled-coil domain containing 148	AK123220|CCDC148|130940|coiled-coil domain containing 148	AK058105|CCDC148|130940|coiled-coil domain containing 148	AF458588|CCDC148|130940|coiled-coil domain containing 148	BC015395|CCDC148|130940|coiled-coil domain containing 148	AK309246|CCDC148|130940|coiled-coil domain containing 148	AK308783|CCDC148|130940|coiled-coil domain containing 148	AK311042|CCDC148|130940|coiled-coil domain containing 148	NM_001171637|CCDC148|130940|coiled-coil domain containing 148	NM_138803|CCDC148|130940|coiled-coil domain containing 148
hg19_v1_chr20_-_43150592_43150672	0.0188394	SOX2.p2	DQ896714|SERINC3|10955|serine incorporator 3	DQ893392|SERINC3|10955|serine incorporator 3	AK300618|SERINC3|10955|serine incorporator 3	AF112227|SERINC3|10955|serine incorporator 3	BC006088|SERINC3|10955|serine incorporator 3
hg19_v1_chr19_-_22379752_22379752	0.0188205	SOX2.p2	NM_001001411|ZNF676|163223|zinc finger protein 676
hg19_v1_chr5_+_36606667_36606790	0.0187951	SOX2.p2	AK312304|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC037310|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK057823|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK293886|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC022285|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC054475|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK295032|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK295754|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	D26443|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	L19158|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg19_v1_chr1_+_225997804_225997851	0.01879	SOX2.p2	U34722|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	BC095430|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	BC003567|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	BC008291|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)
hg19_v1_chr1_+_29241002_29241160	0.0187837	SOX2.p2	NM_001166006|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)	BC039079|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)	AK310655|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)
hg19_v1_chr12_-_56753856_56753911	0.0187284	SOX2.p2	BC051284|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	M97934|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	AK310727|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	AK296939|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	AK296940|STAT2|6773|signal transducer and activator of transcription 2, 113kDa
hg19_v1_chr17_-_56591900_56591984	0.0187256	SOX2.p2	AK308877|MTMR4|9110|myotubularin related protein 4
hg19_v1_chr1_+_185126368_185126424	0.0187224	SOX2.p2	AK291443|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)
hg19_v1_chr6_-_136847743_136847851	0.0186724	SOX2.p2	AK296483|MAP7|9053|microtubule-associated protein 7	AK311270|MAP7|9053|microtubule-associated protein 7	NM_001198614|MAP7|9053|microtubule-associated protein 7	NM_001198618|MAP7|9053|microtubule-associated protein 7	AK311114|MAP7|9053|microtubule-associated protein 7	AK311236|MAP7|9053|microtubule-associated protein 7	AK316062|MAP7|9053|microtubule-associated protein 7	NM_001198619|MAP7|9053|microtubule-associated protein 7	AK311234|MAP7|9053|microtubule-associated protein 7
hg19_v1_chr17_-_67311773_67311773	0.0186344	SOX2.p2	AK096664|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5	NM_018672|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5
hg19_v1_chr6_+_99872769_99872859	0.0185877	SOX2.p2	
hg19_v1_chr8_-_42698447_42698475	0.0185206	SOX2.p2	AL832077|THAP1|55145|THAP domain containing, apoptosis associated protein 1	BC021721|THAP1|55145|THAP domain containing, apoptosis associated protein 1	AK223231|THAP1|55145|THAP domain containing, apoptosis associated protein 1	AK001339|THAP1|55145|THAP domain containing, apoptosis associated protein 1	NM_018105|THAP1|55145|THAP domain containing, apoptosis associated protein 1	NM_199003|THAP1|55145|THAP domain containing, apoptosis associated protein 1
hg19_v1_chr20_+_35234210_35234398	0.0185178	SOX2.p2	BC004446|C20orf24|55969|chromosome 20 open reading frame 24	BC001871|C20orf24|55969|chromosome 20 open reading frame 24	AF274936|C20orf24|55969|chromosome 20 open reading frame 24	S83364|C20orf24|55969|chromosome 20 open reading frame 24
hg19_v1_chr1_-_54871681_54871895	0.0185101	SOX2.p2	AK289474|SSBP3|23648|single stranded DNA binding protein 3	BC003605|SSBP3|23648|single stranded DNA binding protein 3	BC066365|SSBP3|23648|single stranded DNA binding protein 3	AF500116|SSBP3|23648|single stranded DNA binding protein 3
hg19_v1_chr8_-_101315457_101315486	0.0185017	SOX2.p2	AB271913|RNF19A|25897|ring finger protein 19A	AB029316|RNF19A|25897|ring finger protein 19A	NM_015435|RNF19A|25897|ring finger protein 19A
hg19_v1_chr11_+_22359666_22359666	0.0183984	SOX2.p2	AB032435|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6	NM_020346|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6
hg19_v1_chr18_+_76829410_76829489	0.0183871	SOX2.p2	BC053561|ATP9B|374868|ATPase, class II, type 9B
hg19_v1_chr12_-_54121203_54121306	0.0183735	SOX2.p2	AB040969|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AF370415|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AY563137|CALCOCO1|57658|calcium binding and coiled-coil domain 1	BC003177|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AY358397|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AL136895|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK122773|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK222646|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK092788|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK294424|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK296497|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK309199|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK027881|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK315578|CALCOCO1|57658|calcium binding and coiled-coil domain 1	NM_001143682|CALCOCO1|57658|calcium binding and coiled-coil domain 1	NM_020898|CALCOCO1|57658|calcium binding and coiled-coil domain 1
hg19_v1_chr3_-_69129502_69129544	0.0183584	SOX2.p2	AM392893|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AM393088|UBA3|9039|ubiquitin-like modifier activating enzyme 3	CR533537|UBA3|9039|ubiquitin-like modifier activating enzyme 3	DQ893167|UBA3|9039|ubiquitin-like modifier activating enzyme 3	DQ896465|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK314751|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK289392|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK002159|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AL117566|UBA3|9039|ubiquitin-like modifier activating enzyme 3	BC022853|UBA3|9039|ubiquitin-like modifier activating enzyme 3	NM_003968|UBA3|9039|ubiquitin-like modifier activating enzyme 3	NM_198195|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK298878|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK316540|UBA3|9039|ubiquitin-like modifier activating enzyme 3
hg19_v1_chr1_-_217311095_217311096	0.0183445	SOX2.p2	CR749497|ESRRG|2104|estrogen-related receptor gamma	BX647076|ESRRG|2104|estrogen-related receptor gamma	NM_001134285|ESRRG|2104|estrogen-related receptor gamma
hg19_v1_chr2_+_183943511_183943787	0.0183016	SOX2.p2	AF486808|DUSP19|142679|dual specificity phosphatase 19	BC093958|DUSP19|142679|dual specificity phosphatase 19	BC112005|DUSP19|142679|dual specificity phosphatase 19	BC143337|DUSP19|142679|dual specificity phosphatase 19	AB038770|DUSP19|142679|dual specificity phosphatase 19	DQ891206|DUSP19|142679|dual specificity phosphatase 19	DQ894389|DUSP19|142679|dual specificity phosphatase 19	BX647818|DUSP19|142679|dual specificity phosphatase 19
hg19_v1_chr18_-_21891469_21891469	0.0182876	SOX2.p2	AK301862|OSBPL1A|114876|oxysterol binding protein-like 1A	NM_001242508|OSBPL1A|114876|oxysterol binding protein-like 1A
hg19_v1_chr11_-_119234859_119234906	0.0182867	SOX2.p2	AF440755|USP2|9099|ubiquitin specific peptidase 2	NM_171997|USP2|9099|ubiquitin specific peptidase 2
hg19_v1_chr8_-_145064137_145064214	0.0182437	SOX2.p2	BC035485|PARP10|84875|poly (ADP-ribose) polymerase family, member 10
hg19_v1_chr14_-_24037266_24037278	0.018235	SOX2.p2	AF068706|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit	NM_003917|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit
hg19_v1_chr2_+_27799388_27799392	0.018222	SOX2.p2	CR749335|C2orf16|84226|chromosome 2 open reading frame 16	NM_032266|C2orf16|84226|chromosome 2 open reading frame 16	BC140828|C2orf16|84226|chromosome 2 open reading frame 16
hg19_v1_chr21_+_35014624_35015086	0.0182101	SOX2.p2	AK027846|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC058925|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF114487|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF114488|ITSN1|6453|intersectin 1 (SH3 domain protein)	NM_001001132|ITSN1|6453|intersectin 1 (SH3 domain protein)	NM_003024|ITSN1|6453|intersectin 1 (SH3 domain protein)	AK075290|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC039036|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC117560|ITSN1|6453|intersectin 1 (SH3 domain protein)	AK300274|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC073744|ITSN1|6453|intersectin 1 (SH3 domain protein)	AK074554|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC020269|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC013578|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF064243|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF064244|ITSN1|6453|intersectin 1 (SH3 domain protein)	DQ679754|ITSN1|6453|intersectin 1 (SH3 domain protein)	DQ679755|ITSN1|6453|intersectin 1 (SH3 domain protein)	DQ679756|ITSN1|6453|intersectin 1 (SH3 domain protein)	DQ679757|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU107386|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU120735|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU120736|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU140799|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU191901|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC116185|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC116186|ITSN1|6453|intersectin 1 (SH3 domain protein)
hg19_v1_chr5_+_36606456_36606456	0.0182025	SOX2.p2	NM_001166696|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	NM_004172|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg19_v1_chr3_+_129158949_129159071	0.0181765	SOX2.p2	AK022525|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	NM_018262|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	NM_052985|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	NM_052989|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	NM_052990|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AF244930|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AF244931|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK315103|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK001759|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK223095|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg19_v1_chr4_-_185726865_185726941	0.0181681	SOX2.p2	AK296826|ACSL1|2180|acyl-CoA synthetase long-chain family member 1
hg19_v1_chr7_-_143059144_143059172	0.0181393	SOX2.p2	AK291470|FAM131B|9715|family with sequence similarity 131, member B	BC050543|FAM131B|9715|family with sequence similarity 131, member B	NM_014690|FAM131B|9715|family with sequence similarity 131, member B
hg19_v1_chr3_-_120400957_120401129	0.0180189	SOX2.p2	EU831603|HGD|3081|homogentisate 1,2-dioxygenase	EU831690|HGD|3081|homogentisate 1,2-dioxygenase	BC071757|HGD|3081|homogentisate 1,2-dioxygenase	Z75048|HGD|3081|homogentisate 1,2-dioxygenase	U63008|HGD|3081|homogentisate 1,2-dioxygenase	AK290782|HGD|3081|homogentisate 1,2-dioxygenase	BC020792|HGD|3081|homogentisate 1,2-dioxygenase	AF045167|HGD|3081|homogentisate 1,2-dioxygenase
hg19_v1_chr12_-_99548867_99548867	0.0180005	SOX2.p2	AK294191|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001204067|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B
hg19_v1_chr2_-_162931051_162931062	0.0179866	SOX2.p2	BC065265|DPP4|1803|dipeptidyl-peptidase 4	NM_001935|DPP4|1803|dipeptidyl-peptidase 4
hg19_v1_chr1_+_78444922_78445023	0.0179804	SOX2.p2	AK297985|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4
hg19_v1_chr1_+_225997742_225997802	0.0179758	SOX2.p2	AK313436|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	NM_001136018|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)
hg19_v1_chr1_+_22778343_22778346	0.0179699	SOX2.p2	AK091019|ZBTB40|9923|zinc finger and BTB domain containing 40	AK095273|ZBTB40|9923|zinc finger and BTB domain containing 40	NM_001083621|ZBTB40|9923|zinc finger and BTB domain containing 40	NM_014870|ZBTB40|9923|zinc finger and BTB domain containing 40
hg19_v1_chr11_-_117100551_117100559	0.0179664	SOX2.p2	BT006870|PCSK7|9159|proprotein convertase subtilisin/kexin type 7	DQ890632|PCSK7|9159|proprotein convertase subtilisin/kexin type 7	DQ893803|PCSK7|9159|proprotein convertase subtilisin/kexin type 7
hg19_v1_chr2_-_70314065_70314161	0.0179515	SOX2.p2	BC040598|PCBP1-AS1|400960|PCBP1 antisense RNA 1 (non-protein coding)
hg19_v1_chr19_-_41903226_41903372	0.0179474	SOX2.p2	BC007742|EXOSC5|56915|exosome component 5	AK314941|EXOSC5|56915|exosome component 5	AF281134|EXOSC5|56915|exosome component 5	NM_020158|EXOSC5|56915|exosome component 5	BC107696|EXOSC5|56915|exosome component 5	AF285785|EXOSC5|56915|exosome component 5
hg19_v1_chr19_+_56166418_56166470	0.0179135	SOX2.p2	X64044|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2	AB451261|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2	AB451387|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2
hg19_v1_chrX_-_73834430_73834448	0.0179119	SOX2.p2	AK001334|RLIM|51132|ring finger protein, LIM domain interacting
hg19_v1_chr4_+_41614725_41614803	0.017909	SOX2.p2	AK294774|LIMCH1|22998|LIM and calponin homology domains 1
hg19_v1_chr12_+_16500528_16500711	0.0179068	SOX2.p2	NM_020300|MGST1|4257|microsomal glutathione S-transferase 1	AK291148|MGST1|4257|microsomal glutathione S-transferase 1	AK309707|MGST1|4257|microsomal glutathione S-transferase 1	BC005923|MGST1|4257|microsomal glutathione S-transferase 1	BC056863|MGST1|4257|microsomal glutathione S-transferase 1	NM_145791|MGST1|4257|microsomal glutathione S-transferase 1
hg19_v1_chr6_+_10555948_10555948	0.017902	SOX2.p2	NM_001491|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
hg19_v1_chr22_-_41682169_41682183	0.0178929	SOX2.p2	BC014044|RANGAP1|5905|Ran GTPase activating protein 1
hg19_v1_chr6_+_135502477_135502514	0.0178807	SOX2.p2	BC064955|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)
hg19_v1_chr12_-_56615679_56615772	0.0178314	SOX2.p2	BC024284|RNF41|10193|ring finger protein 41	AK300752|RNF41|10193|ring finger protein 41	NM_005785|RNF41|10193|ring finger protein 41	NM_194358|RNF41|10193|ring finger protein 41	AK314811|RNF41|10193|ring finger protein 41	AK304576|RNF41|10193|ring finger protein 41	NM_194359|RNF41|10193|ring finger protein 41
hg19_v1_chr1_+_161068150_161068191	0.0178166	SOX2.p2	BC032482|KLHDC9|126823|kelch domain containing 9	NM_001007255|KLHDC9|126823|kelch domain containing 9	NM_152366|KLHDC9|126823|kelch domain containing 9	AY601914|KLHDC9|126823|kelch domain containing 9	BC022077|KLHDC9|126823|kelch domain containing 9	BC066896|KLHDC9|126823|kelch domain containing 9	AK093268|KLHDC9|126823|kelch domain containing 9
hg19_v1_chr1_-_167487701_167487846	0.0177468	SOX2.p2	DQ893778|CD247|919|CD247 molecule	EU176191|CD247|919|CD247 molecule	X55510|CD247|919|CD247 molecule	X55511|CD247|919|CD247 molecule	X55512|CD247|919|CD247 molecule	BC025703|CD247|919|CD247 molecule	AK128376|CD247|919|CD247 molecule	AK313946|CD247|919|CD247 molecule	J04132|CD247|919|CD247 molecule	AK223325|CD247|919|CD247 molecule	NM_000734|CD247|919|CD247 molecule	NM_198053|CD247|919|CD247 molecule
hg19_v1_chr22_+_35777087_35777166	0.0177196	SOX2.p2	AK313120|HMOX1|3162|heme oxygenase (decycling) 1	BC001491|HMOX1|3162|heme oxygenase (decycling) 1	M23041|HMOX1|3162|heme oxygenase (decycling) 1	BT019785|HMOX1|3162|heme oxygenase (decycling) 1	CR541945|HMOX1|3162|heme oxygenase (decycling) 1	CR541968|HMOX1|3162|heme oxygenase (decycling) 1	CU013103|HMOX1|3162|heme oxygenase (decycling) 1	CU013391|HMOX1|3162|heme oxygenase (decycling) 1	DQ892310|HMOX1|3162|heme oxygenase (decycling) 1	DQ895510|HMOX1|3162|heme oxygenase (decycling) 1	JF323038|HMOX1|3162|heme oxygenase (decycling) 1
hg19_v1_chr19_-_3979828_3980135	0.0176846	SOX2.p2	M19997|EEF2|1938|eukaryotic translation elongation factor 2
hg19_v1_chr8_+_79578258_79578383	0.0176754	SOX2.p2	NM_016010|FAM164A|51101|family with sequence similarity 164, member A	AK024711|FAM164A|51101|family with sequence similarity 164, member A	AK313723|FAM164A|51101|family with sequence similarity 164, member A	AF151820|FAM164A|51101|family with sequence similarity 164, member A	BC009074|FAM164A|51101|family with sequence similarity 164, member A	BC035905|FAM164A|51101|family with sequence similarity 164, member A
hg19_v1_chr9_-_35828728_35828743	0.0176464	SOX2.p2	BC146808|C9orf128|392307|chromosome 9 open reading frame 128	BX648702|C9orf128|392307|chromosome 9 open reading frame 128	NM_001012446|C9orf128|392307|chromosome 9 open reading frame 128
hg19_v1_chr1_-_17308072_17308080	0.0176414	SOX2.p2	AK301655|MFAP2|4237|microfibrillar-associated protein 2	NM_001135247|MFAP2|4237|microfibrillar-associated protein 2	NM_017459|MFAP2|4237|microfibrillar-associated protein 2
hg19_v1_chr3_+_58223415_58223646	0.0176405	SOX2.p2	AF225418|ABHD6|57406|abhydrolase domain containing 6	AK122983|ABHD6|57406|abhydrolase domain containing 6	BC001698|ABHD6|57406|abhydrolase domain containing 6
hg19_v1_chr8_-_23261591_23261612	0.0176264	SOX2.p2	BC000594|LOXL2|4017|lysyl oxidase-like 2
hg19_v1_chr3_-_118864881_118864914	0.0176073	SOX2.p2	AK097667|IGSF11|152404|immunoglobulin superfamily, member 11	NM_152538|IGSF11|152404|immunoglobulin superfamily, member 11	AK292387|IGSF11|152404|immunoglobulin superfamily, member 11
hg19_v1_chr14_+_96846021_96846021	0.0175867	SOX2.p2	BC004818|C14orf129|51527|chromosome 14 open reading frame 129	NM_016472|C14orf129|51527|chromosome 14 open reading frame 129
hg19_v1_chr22_-_43343046_43343046	0.0175808	SOX2.p2	BC008037|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2	NM_007229|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2
hg19_v1_chr12_-_96184346_96184393	0.0175535	SOX2.p2	AF297711|NTN4|59277|netrin 4	AK226070|NTN4|59277|netrin 4	AK315796|NTN4|59277|netrin 4
hg19_v1_chr20_+_35234152_35234175	0.0175501	SOX2.p2	AF112213|C20orf24|55969|chromosome 20 open reading frame 24
hg19_v1_chr16_-_47005339_47005358	0.0175345	SOX2.p2	Y13350|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2
hg19_v1_chr11_-_65625737_65625803	0.017534	SOX2.p2	NM_005507|CFL1|1072|cofilin 1 (non-muscle)
hg19_v1_chr22_+_38597938_38598017	0.0174941	SOX2.p2	NM_001161572|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	NM_001161574|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	NM_012323|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	AK002001|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	BC067751|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	AK300932|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	AJ010857|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)
hg19_v1_chr6_-_84140854_84140954	0.0174915	SOX2.p2	NM_002395|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic
hg19_v1_chr13_+_37393306_37393493	0.0174765	SOX2.p2	NM_000538|RFXAP|5994|regulatory factor X-associated protein	AK313912|RFXAP|5994|regulatory factor X-associated protein	BC026088|RFXAP|5994|regulatory factor X-associated protein	DQ891169|RFXAP|5994|regulatory factor X-associated protein	DQ893581|RFXAP|5994|regulatory factor X-associated protein	DQ894352|RFXAP|5994|regulatory factor X-associated protein
hg19_v1_chr10_-_118765087_118765138	0.0174553	SOX2.p2	NM_001127211|KIAA1598|57698|KIAA1598	NM_018330|KIAA1598|57698|KIAA1598	AK091381|KIAA1598|57698|KIAA1598
hg19_v1_chr3_-_178969644_178969644	0.0174501	SOX2.p2	NM_171830|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3
hg19_v1_chr11_-_70672861_70672872	0.017446	SOX2.p2	AK095088|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2
hg19_v1_chr21_+_27107522_27107531	0.0173736	SOX2.p2	AK313545|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa
hg19_v1_chr3_+_136649316_136649358	0.0173376	SOX2.p2	NM_001190796|NCK1|4690|NCK adaptor protein 1	AK301460|NCK1|4690|NCK adaptor protein 1
hg19_v1_chr20_+_1246959_1246998	0.0173263	SOX2.p2	BC035788|SNPH|9751|syntaphilin	NM_014723|SNPH|9751|syntaphilin	AB002372|SNPH|9751|syntaphilin	AF187733|SNPH|9751|syntaphilin
hg19_v1_chr6_-_108582307_108582463	0.0172628	SOX2.p2	NM_003795|SNX3|8724|sorting nexin 3	NM_152827|SNX3|8724|sorting nexin 3
hg19_v1_chr17_+_74261431_74261584	0.0172295	SOX2.p2	BC035511|FAM100B|283991|family with sequence similarity 100, member B	EU176314|FAM100B|283991|family with sequence similarity 100, member B
hg19_v1_chr5_+_125800786_125800846	0.0171877	SOX2.p2	NM_001146322|GRAMD3|65983|GRAM domain containing 3	AK303857|GRAMD3|65983|GRAM domain containing 3
hg19_v1_chr19_+_41257086_41257312	0.0171714	SOX2.p2	AK293140|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	AK313182|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	X06347|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A	BC008290|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A
hg19_v1_chr7_-_8302141_8302205	0.0171562	SOX2.p2	U38260|ICA1|3382|islet cell autoantigen 1, 69kDa	L01100|ICA1|3382|islet cell autoantigen 1, 69kDa	BC008640|ICA1|3382|islet cell autoantigen 1, 69kDa	BC005922|ICA1|3382|islet cell autoantigen 1, 69kDa	NM_004968|ICA1|3382|islet cell autoantigen 1, 69kDa
hg19_v1_chr6_-_84140758_84140825	0.0171279	SOX2.p2	AK223417|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	AK301875|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	AK289783|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	AK302777|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic
hg19_v1_chr15_-_93277303_93277475	0.0171256	SOX2.p2	BC110328|FAM174B|400451|family with sequence similarity 174, member B
hg19_v1_chr9_+_129677046_129677162	0.0170911	SOX2.p2	AB002349|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	NM_001190729|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	NM_001190730|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	NM_014636|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	BC033708|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	BC019329|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	AK299149|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	BC032372|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1
hg19_v1_chr5_-_95158365_95158435	0.0170752	SOX2.p2	AF162769|GLRX|2745|glutaredoxin (thioltransferase)	BT006689|GLRX|2745|glutaredoxin (thioltransferase)	CR450312|GLRX|2745|glutaredoxin (thioltransferase)	CR542165|GLRX|2745|glutaredoxin (thioltransferase)	DQ892497|GLRX|2745|glutaredoxin (thioltransferase)	DQ895709|GLRX|2745|glutaredoxin (thioltransferase)	D21238|GLRX|2745|glutaredoxin (thioltransferase)	AF069668|GLRX|2745|glutaredoxin (thioltransferase)	BC106075|GLRX|2745|glutaredoxin (thioltransferase)	X76648|GLRX|2745|glutaredoxin (thioltransferase)	AK311868|GLRX|2745|glutaredoxin (thioltransferase)	BC005304|GLRX|2745|glutaredoxin (thioltransferase)	BC010965|GLRX|2745|glutaredoxin (thioltransferase)
hg19_v1_chr9_+_91926109_91926207	0.0170726	SOX2.p2	NM_001827|CKS2|1164|CDC28 protein kinase regulatory subunit 2	X54942|CKS2|1164|CDC28 protein kinase regulatory subunit 2	BC006458|CKS2|1164|CDC28 protein kinase regulatory subunit 2	BT006630|CKS2|1164|CDC28 protein kinase regulatory subunit 2	CR407630|CKS2|1164|CDC28 protein kinase regulatory subunit 2	CR542118|CKS2|1164|CDC28 protein kinase regulatory subunit 2
hg19_v1_chr10_-_18948166_18948228	0.0170136	SOX2.p2	
hg19_v1_chr20_-_43150673_43150683	0.0170039	SOX2.p2	AF153979|SERINC3|10955|serine incorporator 3	U49188|SERINC3|10955|serine incorporator 3	AK222923|SERINC3|10955|serine incorporator 3
hg19_v1_chr6_+_41040687_41040712	0.017002	SOX2.p2	NM_002505|NFYA|4800|nuclear transcription factor Y, alpha	NM_021705|NFYA|4800|nuclear transcription factor Y, alpha
hg19_v1_chr10_+_96443250_96443576	0.0169892	SOX2.p2	NM_000772|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	NM_001128925|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	M61856|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	BC069666|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	BC096257|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	BC096258|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	BC096259|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	BC096260|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	M61853|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	AK223510|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	AK313403|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18
hg19_v1_chr14_+_71996041_71996041	0.0169752	SOX2.p2	AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1	AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1	NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1
hg19_v1_chr12_-_56615484_56615661	0.0169699	SOX2.p2	NM_001242826|RNF41|10193|ring finger protein 41	BC011626|RNF41|10193|ring finger protein 41	BC095418|RNF41|10193|ring finger protein 41	BC036267|RNF41|10193|ring finger protein 41
hg19_v1_chr20_+_44044706_44044803	0.0169394	SOX2.p2	NM_001184728|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	NM_001184729|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	NM_001184730|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	NM_015937|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK302093|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BC136827|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BC136828|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK225517|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BC015022|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK296063|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK299013|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK301815|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311492|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311520|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK316358|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK075469|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK293294|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BX537612|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK293686|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK296139|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311100|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311416|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311522|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AB057724|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BC110892|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AY358588|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AF132940|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AL121742|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T
hg19_v1_chr9_+_35538890_35538938	0.016939	SOX2.p2	BC146654|RUSC2|9853|RUN and SH3 domain containing 2	AK299805|RUSC2|9853|RUN and SH3 domain containing 2
hg19_v1_chr2_-_164592512_164592522	0.0169371	SOX2.p2	BX649105|FIGN|55137|fidgetin	NM_018086|FIGN|55137|fidgetin	AK125324|FIGN|55137|fidgetin
hg19_v1_chr5_+_140809957_140810084	0.0169026	SOX2.p2	AY358946|PCDHGA12|26025|protocadherin gamma subfamily A, 12
hg19_v1_chr19_-_42806460_42806861	0.0168538	SOX2.p2	CR407626|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	D63391|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	BC007863|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	BC003016|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	NM_002573|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg19_v1_chr2_+_70056773_70056841	0.0168264	SOX2.p2	AK024042|GMCL1|64395|germ cell-less homolog 1 (Drosophila)	BC007420|GMCL1|64395|germ cell-less homolog 1 (Drosophila)	NM_178439|GMCL1|64395|germ cell-less homolog 1 (Drosophila)	AK023119|GMCL1|64395|germ cell-less homolog 1 (Drosophila)
hg19_v1_chr6_-_47277246_47277283	0.0167952	SOX2.p2	AF068868|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	BT007420|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	DQ890769|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	DQ893930|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	BC017730|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr6_-_33754712_33754718	0.0167775	SOX2.p2	AK301083|LEMD2|221496|LEM domain containing 2	NM_001143944|LEMD2|221496|LEM domain containing 2
hg19_v1_chr17_-_27139391_27139503	0.0167758	SOX2.p2	AK095569|C17orf63|55731|chromosome 17 open reading frame 63
hg19_v1_chr1_-_151688791_151688881	0.0167566	SOX2.p2	AB209264|CELF3|11189|CUGBP, Elav-like family member 3	NM_001172648|CELF3|11189|CUGBP, Elav-like family member 3	NM_001172649|CELF3|11189|CUGBP, Elav-like family member 3
hg19_v1_chr1_+_171810611_171810796	0.016752	SOX2.p2	NM_001136127|DNM3|26052|dynamin 3	NM_015569|DNM3|26052|dynamin 3	AK056279|DNM3|26052|dynamin 3	AL136712|DNM3|26052|dynamin 3	AB020627|DNM3|26052|dynamin 3	AK308992|DNM3|26052|dynamin 3	AK307806|DNM3|26052|dynamin 3	BC064546|DNM3|26052|dynamin 3	AM393667|DNM3|26052|dynamin 3	AM393846|DNM3|26052|dynamin 3
hg19_v1_chr1_-_108742738_108742802	0.0167114	SOX2.p2	AF123303|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	EU832524|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	EU832606|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	AJ619987|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	AK316506|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24
hg19_v1_chr19_+_16178170_16178350	0.0167079	SOX2.p2	NM_001145160|TPM4|7171|tropomyosin 4	AK023385|TPM4|7171|tropomyosin 4
hg19_v1_chrM_+_14601_15025	0.016688	SOX2.p2	
hg19_v1_chr6_-_167040659_167040679	0.0166805	SOX2.p2	X85106|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg19_v1_chr7_+_116593354_116593417	0.0166415	SOX2.p2	BC075855|ST7|7982|suppression of tumorigenicity 7	NM_018412|ST7|7982|suppression of tumorigenicity 7	NM_021908|ST7|7982|suppression of tumorigenicity 7	AF234882|ST7|7982|suppression of tumorigenicity 7	AF234883|ST7|7982|suppression of tumorigenicity 7
hg19_v1_chr18_-_64271215_64271408	0.0166279	SOX2.p2	AJ007607|CDH19|28513|cadherin 19, type 2	NM_021153|CDH19|28513|cadherin 19, type 2	AK304000|CDH19|28513|cadherin 19, type 2	AK315257|CDH19|28513|cadherin 19, type 2	BC015877|CDH19|28513|cadherin 19, type 2
hg19_v1_chr5_-_146889618_146889635	0.0166119	SOX2.p2	BC077077|DPYSL3|1809|dihydropyrimidinase-like 3	NM_001197294|DPYSL3|1809|dihydropyrimidinase-like 3
hg19_v1_chr3_-_57530067_57530070	0.0166008	SOX2.p2	AK126276|DNAH12|201625|dynein, axonemal, heavy chain 12	NM_178504|DNAH12|201625|dynein, axonemal, heavy chain 12	NM_198564|DNAH12|201625|dynein, axonemal, heavy chain 12
hg19_v1_chr7_-_143991255_143991279	0.0165825	SOX2.p2	CR749203|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5
hg19_v1_chr9_-_95166827_95166980	0.016523	SOX2.p2	AF086912|OGN|4969|osteoglycin	AF100758|OGN|4969|osteoglycin	NM_014057|OGN|4969|osteoglycin	NM_033014|OGN|4969|osteoglycin	AK289628|OGN|4969|osteoglycin	AK295433|OGN|4969|osteoglycin
hg19_v1_chr14_+_75229995_75230069	0.0165076	SOX2.p2	AK095760|YLPM1|56252|YLP motif containing 1	NM_019589|YLPM1|56252|YLP motif containing 1
hg19_v1_chr11_-_62472901_62472984	0.0164962	SOX2.p2	
hg19_v1_chr1_-_23885916_23886053	0.0164711	SOX2.p2	BT006791|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	DQ892504|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	DQ895539|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	DQ895717|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	BC003107|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	D28449|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	AK290003|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
hg19_v1_chr3_+_187930720_187930720	0.0164699	SOX2.p2	NM_005578|LPP|4026|LIM domain containing preferred translocation partner in lipoma	U49957|LPP|4026|LIM domain containing preferred translocation partner in lipoma
hg19_v1_chr4_+_123747815_123747873	0.016468	SOX2.p2	J04513|FGF2|2247|fibroblast growth factor 2 (basic)	NM_002006|FGF2|2247|fibroblast growth factor 2 (basic)	BC111737|FGF2|2247|fibroblast growth factor 2 (basic)
hg19_v1_chrX_+_11777734_11777760	0.0164585	SOX2.p2	NM_006800|MSL3|10943|male-specific lethal 3 homolog (Drosophila)	AK025642|MSL3|10943|male-specific lethal 3 homolog (Drosophila)
hg19_v1_chr1_-_43855473_43855484	0.0164562	SOX2.p2	NM_052877|MED8|112950|mediator complex subunit 8	NM_201542|MED8|112950|mediator complex subunit 8
hg19_v1_chr4_+_37978990_37979044	0.016454	SOX2.p2	AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1
hg19_v1_chr2_-_163695028_163695221	0.0164448	SOX2.p2	AF032897|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7
hg19_v1_chr1_-_183387501_183387736	0.0164325	SOX2.p2	AB007948|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2	AK291390|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2	NM_015039|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2	AF288395|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2
hg19_v1_chr21_-_33104405_33104467	0.0164304	SOX2.p2	BC014921|SCAF4|57466|SR-related CTD-associated factor 4	NM_001145444|SCAF4|57466|SR-related CTD-associated factor 4	NM_001145445|SCAF4|57466|SR-related CTD-associated factor 4	NM_020706|SCAF4|57466|SR-related CTD-associated factor 4
hg19_v1_chr3_-_139258531_139258670	0.016423	SOX2.p2	AK309492|RBP1|5947|retinol binding protein 1, cellular	NM_001130992|RBP1|5947|retinol binding protein 1, cellular	NM_001130993|RBP1|5947|retinol binding protein 1, cellular	NM_002899|RBP1|5947|retinol binding protein 1, cellular
hg19_v1_chr13_-_24007822_24007859	0.0164102	SOX2.p2	NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)
hg19_v1_chr1_-_45140117_45140179	0.0163411	SOX2.p2	AK296548|TMEM53|79639|transmembrane protein 53	BC007521|TMEM53|79639|transmembrane protein 53
hg19_v1_chr1_+_200993041_200993134	0.0163282	SOX2.p2	
hg19_v1_chr10_-_61122219_61122351	0.0162853	SOX2.p2	DQ894404|FAM13C|220965|family with sequence similarity 13, member C	EU176262|FAM13C|220965|family with sequence similarity 13, member C	AK294805|FAM13C|220965|family with sequence similarity 13, member C	AK289796|FAM13C|220965|family with sequence similarity 13, member C	BC036453|FAM13C|220965|family with sequence similarity 13, member C	AK316542|FAM13C|220965|family with sequence similarity 13, member C	BC064431|FAM13C|220965|family with sequence similarity 13, member C	NM_001001971|FAM13C|220965|family with sequence similarity 13, member C	NM_001166698|FAM13C|220965|family with sequence similarity 13, member C	NM_198215|FAM13C|220965|family with sequence similarity 13, member C
hg19_v1_chr2_-_242556883_242556915	0.0162617	SOX2.p2	AK225608|THAP4|51078|THAP domain containing 4	AF132970|THAP4|51078|THAP domain containing 4	NM_001164356|THAP4|51078|THAP domain containing 4
hg19_v1_chr18_-_22932109_22932217	0.016212	SOX2.p2	AJ518106|ZNF521|25925|zinc finger protein 521	BC032869|ZNF521|25925|zinc finger protein 521	AK027354|ZNF521|25925|zinc finger protein 521	AK293067|ZNF521|25925|zinc finger protein 521	NM_015461|ZNF521|25925|zinc finger protein 521
hg19_v1_chr11_-_126081532_126081586	0.0161936	SOX2.p2	AK027400|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4	AK308059|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4	AK225320|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4	BC014131|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4	NM_001144827|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4	NM_032795|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4
hg19_v1_chr13_+_42712177_42712244	0.0161243	SOX2.p2	AK302727|DGKH|160851|diacylglycerol kinase, eta	NM_001204505|DGKH|160851|diacylglycerol kinase, eta	NM_001204506|DGKH|160851|diacylglycerol kinase, eta	AK122909|DGKH|160851|diacylglycerol kinase, eta	AK302631|DGKH|160851|diacylglycerol kinase, eta	BC043292|DGKH|160851|diacylglycerol kinase, eta	BC044822|DGKH|160851|diacylglycerol kinase, eta
hg19_v1_chr11_-_70672644_70672714	0.0160802	SOX2.p2	AB208026|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2
hg19_v1_chr7_-_37488408_37488529	0.0160562	SOX2.p2	AL136787|ELMO1|9844|engulfment and cell motility 1	AK001084|ELMO1|9844|engulfment and cell motility 1	AK314349|ELMO1|9844|engulfment and cell motility 1
hg19_v1_chr3_-_164796275_164796282	0.0160505	SOX2.p2	BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)	X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)	NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)
hg19_v1_chr19_+_38810461_38810515	0.016031	SOX2.p2	AF117708|KCNK6|9424|potassium channel, subfamily K, member 6	NM_004823|KCNK6|9424|potassium channel, subfamily K, member 6	AK222545|KCNK6|9424|potassium channel, subfamily K, member 6	AK315653|KCNK6|9424|potassium channel, subfamily K, member 6	AF281302|KCNK6|9424|potassium channel, subfamily K, member 6
hg19_v1_chr16_+_68573660_68573660	0.0160156	SOX2.p2	NM_133458|ZFP90|146198|zinc finger protein 90 homolog (mouse)
hg19_v1_chrX_-_47931000_47931000	0.0160084	SOX2.p2	NM_001190255|ZNF630|57232|zinc finger protein 630
hg19_v1_chr16_+_57769626_57769665	0.0159273	SOX2.p2	NM_005886|KATNB1|10300|katanin p80 (WD repeat containing) subunit B 1
hg19_v1_chr3_+_123813527_123813684	0.0159152	SOX2.p2	AK314126|KALRN|8997|kalirin, RhoGEF kinase	AK311154|KALRN|8997|kalirin, RhoGEF kinase	NM_001024660|KALRN|8997|kalirin, RhoGEF kinase	NM_003947|KALRN|8997|kalirin, RhoGEF kinase	AK311581|KALRN|8997|kalirin, RhoGEF kinase	U94190|KALRN|8997|kalirin, RhoGEF kinase	BC037924|KALRN|8997|kalirin, RhoGEF kinase
hg19_v1_chr7_-_124405680_124405913	0.0159141	SOX2.p2	BC040007|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)	NM_005302|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)
hg19_v1_chr3_-_57582866_57583075	0.0158948	SOX2.p2	AF493883|ARF4|378|ADP-ribosylation factor 4	DQ894082|ARF4|378|ADP-ribosylation factor 4	EU176202|ARF4|378|ADP-ribosylation factor 4	M36341|ARF4|378|ADP-ribosylation factor 4	U91920|ARF4|378|ADP-ribosylation factor 4	BC003364|ARF4|378|ADP-ribosylation factor 4	AK313008|ARF4|378|ADP-ribosylation factor 4
hg19_v1_chr15_-_77154284_77154284	0.0158628	SOX2.p2	BX647285|SCAPER|49855|S-phase cyclin A-associated protein in the ER	NM_001145923|SCAPER|49855|S-phase cyclin A-associated protein in the ER
hg19_v1_chr17_-_43510279_43510295	0.0157779	SOX2.p2	BC067345|ARHGAP27|201176|Rho GTPase activating protein 27	NM_174919|ARHGAP27|201176|Rho GTPase activating protein 27
hg19_v1_chr6_-_84140651_84140734	0.0157759	SOX2.p2	U43944|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	X77244|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	DQ892155|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	EU176687|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	L34035|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic
hg19_v1_chr5_-_100238870_100238987	0.0157745	SOX2.p2	L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
hg19_v1_chr3_-_119582422_119582427	0.0157495	SOX2.p2	AY123976|GSK3B|2932|glycogen synthase kinase 3 beta
hg19_v1_chr1_-_45956795_45956871	0.0157108	SOX2.p2	BX648441|TESK2|10420|testis-specific kinase 2	AK027573|TESK2|10420|testis-specific kinase 2	AK294172|TESK2|10420|testis-specific kinase 2	BC022194|TESK2|10420|testis-specific kinase 2	AB057597|TESK2|10420|testis-specific kinase 2	AJ132545|TESK2|10420|testis-specific kinase 2	AK299269|TESK2|10420|testis-specific kinase 2	NM_007170|TESK2|10420|testis-specific kinase 2	AK302494|TESK2|10420|testis-specific kinase 2
hg19_v1_chr19_+_36139221_36139228	0.0157107	SOX2.p2	AK312140|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)
hg19_v1_chr17_+_4046417_4046549	0.0156933	SOX2.p2	NM_144611|CYB5D2|124936|cytochrome b5 domain containing 2	BC051697|CYB5D2|124936|cytochrome b5 domain containing 2
hg19_v1_chr3_+_127347966_127348098	0.0156512	SOX2.p2	BC019330|PODXL2|50512|podocalyxin-like 2	AY359096|PODXL2|50512|podocalyxin-like 2	NM_015720|PODXL2|50512|podocalyxin-like 2	BC052585|PODXL2|50512|podocalyxin-like 2	AF219137|PODXL2|50512|podocalyxin-like 2
hg19_v1_chr12_-_92539614_92539672	0.0156344	SOX2.p2	BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative	BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative	X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative	AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative	AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative	NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative
hg19_v1_chr4_+_41540320_41540334	0.0156275	SOX2.p2	AL831962|LIMCH1|22998|LIM and calponin homology domains 1
hg19_v1_chr1_-_217113007_217113016	0.0156039	SOX2.p2	AY388459|ESRRG|2104|estrogen-related receptor gamma	AY388458|ESRRG|2104|estrogen-related receptor gamma	NM_001243512|ESRRG|2104|estrogen-related receptor gamma	NM_001243513|ESRRG|2104|estrogen-related receptor gamma	AY388457|ESRRG|2104|estrogen-related receptor gamma	AY388460|ESRRG|2104|estrogen-related receptor gamma	NM_001243510|ESRRG|2104|estrogen-related receptor gamma	NM_001243511|ESRRG|2104|estrogen-related receptor gamma
hg19_v1_chr1_+_244999007_244999024	0.0155887	SOX2.p2	
hg19_v1_chr1_+_100111430_100111704	0.0155732	SOX2.p2	NM_017734|PALMD|54873|palmdelphin	AF262379|PALMD|54873|palmdelphin	AL390971|PALMD|54873|palmdelphin	AJ312214|PALMD|54873|palmdelphin	BC012570|PALMD|54873|palmdelphin	AK000278|PALMD|54873|palmdelphin	AL390973|PALMD|54873|palmdelphin
hg19_v1_chr12_-_46766019_46766560	0.0155647	SOX2.p2	AK291644|SLC38A2|54407|solute carrier family 38, member 2	BC040342|SLC38A2|54407|solute carrier family 38, member 2	AK001700|SLC38A2|54407|solute carrier family 38, member 2	AJ344099|SLC38A2|54407|solute carrier family 38, member 2	AF298897|SLC38A2|54407|solute carrier family 38, member 2
hg19_v1_chr9_-_34620483_34620488	0.0155178	SOX2.p2	BC107697|DCTN3|11258|dynactin 3 (p22)	AK314730|DCTN3|11258|dynactin 3 (p22)
hg19_v1_chr18_+_32556891_32557027	0.0155163	SOX2.p2	NM_001143826|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2
hg19_v1_chr4_-_47983430_47983549	0.015507	SOX2.p2	M84741|CNGA1|1259|cyclic nucleotide gated channel alpha 1	NM_001142564|CNGA1|1259|cyclic nucleotide gated channel alpha 1	S42457|CNGA1|1259|cyclic nucleotide gated channel alpha 1
hg19_v1_chr17_-_67057046_67057135	0.015486	SOX2.p2	BC062472|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	AK057068|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	AY028899|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	NM_080283|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9
hg19_v1_chr1_-_149900143_149900235	0.0154741	SOX2.p2	NM_005850|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	AK097315|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa
hg19_v1_chr5_-_140700339_140700365	0.0154568	SOX2.p2	NM_005642|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa
hg19_v1_chr16_-_29937354_29937518	0.0154462	SOX2.p2	DQ891555|KCTD13|253980|potassium channel tetramerisation domain containing 13	DQ894742|KCTD13|253980|potassium channel tetramerisation domain containing 13	AF401315|KCTD13|253980|potassium channel tetramerisation domain containing 13	AY027918|KCTD13|253980|potassium channel tetramerisation domain containing 13	AF289573|KCTD13|253980|potassium channel tetramerisation domain containing 13
hg19_v1_chr19_+_35782988_35783096	0.0154396	SOX2.p2	NM_001199216|MAG|4099|myelin associated glycoprotein	NM_002361|MAG|4099|myelin associated glycoprotein	NM_080600|MAG|4099|myelin associated glycoprotein	AK223562|MAG|4099|myelin associated glycoprotein	BC093045|MAG|4099|myelin associated glycoprotein	BC034042|MAG|4099|myelin associated glycoprotein	AK094545|MAG|4099|myelin associated glycoprotein	AK222649|MAG|4099|myelin associated glycoprotein	AK308976|MAG|4099|myelin associated glycoprotein	M29273|MAG|4099|myelin associated glycoprotein	AK294644|MAG|4099|myelin associated glycoprotein	AK222680|MAG|4099|myelin associated glycoprotein	BC053347|MAG|4099|myelin associated glycoprotein
hg19_v1_chr4_-_100242487_100242571	0.0153851	SOX2.p2	BT019812|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	D00137|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	M24317|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	M21692|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK304396|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	BX647469|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AF153821|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK299409|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK316501|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	X03350|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK301018|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK303945|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	BC033009|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	NM_000668|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide
hg19_v1_chr2_-_172967234_172967477	0.0153763	SOX2.p2	HQ258018|DLX2|1746|distal-less homeobox 2	AB208823|DLX2|1746|distal-less homeobox 2	AK297503|DLX2|1746|distal-less homeobox 2	BC032558|DLX2|1746|distal-less homeobox 2	NM_004405|DLX2|1746|distal-less homeobox 2
hg19_v1_chr14_+_24439082_24439315	0.0153562	SOX2.p2	NM_001193636|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	NM_001193637|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	GQ871924|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1	AY616183|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	AY920361|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	AY920362|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	AY943857|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	NM_001193635|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	GQ871921|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1	GU564234|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	GU564235|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2
hg19_v1_chr3_-_69299305_69299315	0.0153493	SOX2.p2	AK295045|FRMD4B|23150|FERM domain containing 4B
hg19_v1_chr14_+_23340955_23341087	0.0153099	SOX2.p2	NM_014045|LRP10|26020|low density lipoprotein receptor-related protein 10	AY358399|LRP10|26020|low density lipoprotein receptor-related protein 10	BX161500|LRP10|26020|low density lipoprotein receptor-related protein 10
hg19_v1_chr17_-_56065596_56065640	0.0152373	SOX2.p2	NM_007146|VEZF1|7716|vascular endothelial zinc finger 1
hg19_v1_chrX_+_122993536_122994348	0.015232	SOX2.p2	AK313883|XIAP|331|X-linked inhibitor of apoptosis	NM_001204401|XIAP|331|X-linked inhibitor of apoptosis	NM_001167|XIAP|331|X-linked inhibitor of apoptosis	AK309704|XIAP|331|X-linked inhibitor of apoptosis	U32974|XIAP|331|X-linked inhibitor of apoptosis	BC032729|XIAP|331|X-linked inhibitor of apoptosis
hg19_v1_chr1_+_955468_955525	0.0152259	SOX2.p2	AB191264|AGRN|375790|agrin	NM_198576|AGRN|375790|agrin
hg19_v1_chr12_-_71003622_71003623	0.0152242	SOX2.p2	BC101679|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC113463|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC143356|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC143360|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	NM_001206971|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	NM_001206972|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	NM_002837|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	X54131|PTPRB|5787|protein tyrosine phosphatase, receptor type, B
hg19_v1_chr6_-_32191779_32191843	0.0152076	SOX2.p2	U95299|NOTCH4|4855|notch 4	BC140782|NOTCH4|4855|notch 4	BC144540|NOTCH4|4855|notch 4	BC144541|NOTCH4|4855|notch 4	BC063815|NOTCH4|4855|notch 4	AK290785|NOTCH4|4855|notch 4	NM_004557|NOTCH4|4855|notch 4
hg19_v1_chr11_+_118889427_118889482	0.0151704	SOX2.p2	AF161520|TRAPPC4|51399|trafficking protein particle complex 4	AK025623|TRAPPC4|51399|trafficking protein particle complex 4	AK290520|TRAPPC4|51399|trafficking protein particle complex 4	AK293914|TRAPPC4|51399|trafficking protein particle complex 4	AK293977|TRAPPC4|51399|trafficking protein particle complex 4	AK297422|TRAPPC4|51399|trafficking protein particle complex 4	BC010866|TRAPPC4|51399|trafficking protein particle complex 4
hg19_v1_chr8_+_62200524_62200577	0.0151566	SOX2.p2	NM_173519|CLVS1|157807|clavesin 1	AF445194|CLVS1|157807|clavesin 1	BC048992|CLVS1|157807|clavesin 1	AK091641|CLVS1|157807|clavesin 1	BC042617|CLVS1|157807|clavesin 1	AY094971|CLVS1|157807|clavesin 1	AK313040|CLVS1|157807|clavesin 1
hg19_v1_chr12_-_106641675_106642020	0.0151394	SOX2.p2	BC067357|CKAP4|10970|cytoskeleton-associated protein 4	BC082972|CKAP4|10970|cytoskeleton-associated protein 4	NM_006825|CKAP4|10970|cytoskeleton-associated protein 4	X69910|CKAP4|10970|cytoskeleton-associated protein 4	BC094824|CKAP4|10970|cytoskeleton-associated protein 4	BC037578|CKAP4|10970|cytoskeleton-associated protein 4	AK223563|CKAP4|10970|cytoskeleton-associated protein 4	AK123693|CKAP4|10970|cytoskeleton-associated protein 4	BC025341|CKAP4|10970|cytoskeleton-associated protein 4
hg19_v1_chr1_+_43855599_43855639	0.0151266	SOX2.p2	BC051343|SZT2|23334|seizure threshold 2 homolog (mouse)	AK091821|SZT2|23334|seizure threshold 2 homolog (mouse)
hg19_v1_chr11_+_120195837_120195837	0.0151094	SOX2.p2	AK128040|TMEM136|219902|transmembrane protein 136	NM_001198670|TMEM136|219902|transmembrane protein 136	NM_001198671|TMEM136|219902|transmembrane protein 136	NM_001198672|TMEM136|219902|transmembrane protein 136	NM_001198673|TMEM136|219902|transmembrane protein 136	NM_001198674|TMEM136|219902|transmembrane protein 136	NM_001198675|TMEM136|219902|transmembrane protein 136	NM_174926|TMEM136|219902|transmembrane protein 136
hg19_v1_chr6_-_132834165_132834336	0.0150908	SOX2.p2	U77942|STX7|8417|syntaxin 7	BC011975|STX7|8417|syntaxin 7	AK294911|STX7|8417|syntaxin 7	AK301464|STX7|8417|syntaxin 7	NM_003569|STX7|8417|syntaxin 7
hg19_v1_chr22_-_26875376_26875550	0.0150676	SOX2.p2	AK097886|HPS4|89781|Hermansky-Pudlak syndrome 4	BC035614|HPS4|89781|Hermansky-Pudlak syndrome 4	AK054717|HPS4|89781|Hermansky-Pudlak syndrome 4	AL365512|HPS4|89781|Hermansky-Pudlak syndrome 4	NM_152841|HPS4|89781|Hermansky-Pudlak syndrome 4
hg19_v1_chr12_+_65218351_65218416	0.0150333	SOX2.p2	NM_015279|TBC1D30|23329|TBC1 domain family, member 30	AK055404|TBC1D30|23329|TBC1 domain family, member 30
hg19_v1_chr5_+_139175385_139175428	0.0150298	SOX2.p2	AL136559|PSD2|84249|pleckstrin and Sec7 domain containing 2	NM_032289|PSD2|84249|pleckstrin and Sec7 domain containing 2	BC038233|PSD2|84249|pleckstrin and Sec7 domain containing 2
hg19_v1_chr5_+_140571903_140572125	0.0150011	SOX2.p2	AK056391|PCDHB10|56126|protocadherin beta 10	BC031837|PCDHB10|56126|protocadherin beta 10	NM_018930|PCDHB10|56126|protocadherin beta 10	AY358720|PCDHB10|56126|protocadherin beta 10	AF152489|PCDHB10|56126|protocadherin beta 10	AF217748|PCDHB10|56126|protocadherin beta 10
hg19_v1_chr19_-_4342718_4342782	0.0149706	SOX2.p2	AK125774|STAP2|55620|signal transducing adaptor family member 2
hg19_v1_chr15_-_70994608_70994646	0.0149306	SOX2.p2	BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats
hg19_v1_chr1_+_155036201_155036299	0.0148338	SOX2.p2	NM_005227|EFNA4|1945|ephrin-A4	NM_182689|EFNA4|1945|ephrin-A4	NM_182690|EFNA4|1945|ephrin-A4	BC107483|EFNA4|1945|ephrin-A4	AJ006352|EFNA4|1945|ephrin-A4	AJ006353|EFNA4|1945|ephrin-A4	U14188|EFNA4|1945|ephrin-A4	CR533569|EFNA4|1945|ephrin-A4
hg19_v1_chr14_+_23305913_23306026	0.0148328	SOX2.p2	Z48481|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	D26512|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	X90925|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	U41078|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)
hg19_v1_chr8_-_30515665_30515808	0.0148297	SOX2.p2	S67861|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	X63469|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	BC030572|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	BC001775|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	NM_002095|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa
hg19_v1_chr16_+_88636818_88636839	0.0148225	SOX2.p2	AK225807|ZC3H18|124245|zinc finger CCCH-type containing 18
hg19_v1_chr16_+_88636841_88636897	0.0147896	SOX2.p2	BC050463|ZC3H18|124245|zinc finger CCCH-type containing 18
hg19_v1_chr3_-_183735617_183735765	0.0147763	SOX2.p2	BC142670|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	BC142719|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	U83661|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AF104942|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AY754874|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AY754875|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AY754876|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AB209454|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	BC051358|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	NM_001023587|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	NM_005688|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
hg19_v1_chr19_-_47922339_47922382	0.014762	SOX2.p2	AK289950|MEIS3|56917|Meis homeobox 3
hg19_v1_chr16_-_4323055_4323075	0.0147336	SOX2.p2	AK309301|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)
hg19_v1_chr10_-_97321094_97321184	0.0146897	SOX2.p2	AB037717|SORBS1|10580|sorbin and SH3 domain containing 1	BC152463|SORBS1|10580|sorbin and SH3 domain containing 1	AK022468|SORBS1|10580|sorbin and SH3 domain containing 1	AK300407|SORBS1|10580|sorbin and SH3 domain containing 1	AK304753|SORBS1|10580|sorbin and SH3 domain containing 1	AL117472|SORBS1|10580|sorbin and SH3 domain containing 1	AM260536|SORBS1|10580|sorbin and SH3 domain containing 1	NM_015385|SORBS1|10580|sorbin and SH3 domain containing 1	NM_024991|SORBS1|10580|sorbin and SH3 domain containing 1
hg19_v1_chr10_+_91092238_91092329	0.0146452	SOX2.p2	NM_001031683|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	AK297137|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	AF026939|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	BC001383|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	BC004977|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3
hg19_v1_chr12_-_6233684_6233835	0.0146387	SOX2.p2	X04385|VWF|7450|von Willebrand factor	AK301216|VWF|7450|von Willebrand factor	AK292122|VWF|7450|von Willebrand factor	M17588|VWF|7450|von Willebrand factor	X04146|VWF|7450|von Willebrand factor	AK298097|VWF|7450|von Willebrand factor	BC022258|VWF|7450|von Willebrand factor	NM_000552|VWF|7450|von Willebrand factor
hg19_v1_chr17_-_7297826_7297888	0.0146165	SOX2.p2	AK124006|PLSCR3|57048|phospholipid scramblase 3	AF289602|PLSCR3|57048|phospholipid scramblase 3	BC028080|PLSCR3|57048|phospholipid scramblase 3	AK098229|PLSCR3|57048|phospholipid scramblase 3	AK075188|PLSCR3|57048|phospholipid scramblase 3	AK314643|PLSCR3|57048|phospholipid scramblase 3	BC093026|PLSCR3|57048|phospholipid scramblase 3	AF159442|PLSCR3|57048|phospholipid scramblase 3
hg19_v1_chr17_-_37350051_37350135	0.0146083	SOX2.p2	AB209176|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit
hg19_v1_chr9_+_96846804_96846824	0.0146043	SOX2.p2	AK124912|PTPDC1|138639|protein tyrosine phosphatase domain containing 1
hg19_v1_chr17_-_79479780_79479830	0.0146007	SOX2.p2	BC001920|ACTG1|71|actin, gamma 1	BC015779|ACTG1|71|actin, gamma 1	BC053572|ACTG1|71|actin, gamma 1	BC015005|ACTG1|71|actin, gamma 1	BC009848|ACTG1|71|actin, gamma 1	BC010999|ACTG1|71|actin, gamma 1	BC007442|ACTG1|71|actin, gamma 1	BC012050|ACTG1|71|actin, gamma 1	BC018774|ACTG1|71|actin, gamma 1	BC015695|ACTG1|71|actin, gamma 1	BC000292|ACTG1|71|actin, gamma 1	AK304637|ACTG1|71|actin, gamma 1	AK291937|ACTG1|71|actin, gamma 1	AK301175|ACTG1|71|actin, gamma 1	X04098|ACTG1|71|actin, gamma 1
hg19_v1_chr21_-_27512668_27512777	0.0145802	SOX2.p2	AK295621|APP|351|amyloid beta (A4) precursor protein	NM_001136016|APP|351|amyloid beta (A4) precursor protein	AK311717|APP|351|amyloid beta (A4) precursor protein
hg19_v1_chr7_-_27196163_27196328	0.0145548	SOX2.p2	BC061916|HOXA7|3204|homeobox A7	AF026397|HOXA7|3204|homeobox A7	NM_006896|HOXA7|3204|homeobox A7
hg19_v1_chr19_-_42463437_42463499	0.0145191	SOX2.p2	AF112996|RABAC1|10567|Rab acceptor 1 (prenylated)	BT019964|RABAC1|10567|Rab acceptor 1 (prenylated)	CR457214|RABAC1|10567|Rab acceptor 1 (prenylated)	CR542116|RABAC1|10567|Rab acceptor 1 (prenylated)	AF112202|RABAC1|10567|Rab acceptor 1 (prenylated)	AJ133534|RABAC1|10567|Rab acceptor 1 (prenylated)	BC008950|RABAC1|10567|Rab acceptor 1 (prenylated)
hg19_v1_chr20_+_60878048_60878073	0.0145044	SOX2.p2	BC017245|ADRM1|11047|adhesion regulating molecule 1	BC093021|ADRM1|11047|adhesion regulating molecule 1	BC003059|ADRM1|11047|adhesion regulating molecule 1	AK297567|ADRM1|11047|adhesion regulating molecule 1	D64154|ADRM1|11047|adhesion regulating molecule 1
hg19_v1_chr12_+_6898699_6898703	0.0144758	SOX2.p2	AK310652|CD4|920|CD4 molecule	AK310750|CD4|920|CD4 molecule	AK311495|CD4|920|CD4 molecule	AK315898|CD4|920|CD4 molecule	AK312828|CD4|920|CD4 molecule	AK316462|CD4|920|CD4 molecule	AK310687|CD4|920|CD4 molecule
hg19_v1_chr6_+_43737937_43738099	0.0144129	SOX2.p2	NM_001025366|VEGFA|7422|vascular endothelial growth factor A	NM_001025367|VEGFA|7422|vascular endothelial growth factor A	NM_001025368|VEGFA|7422|vascular endothelial growth factor A	NM_001025369|VEGFA|7422|vascular endothelial growth factor A	NM_001025370|VEGFA|7422|vascular endothelial growth factor A	NM_001033756|VEGFA|7422|vascular endothelial growth factor A	NM_001171622|VEGFA|7422|vascular endothelial growth factor A	NM_001171623|VEGFA|7422|vascular endothelial growth factor A	NM_001171624|VEGFA|7422|vascular endothelial growth factor A	NM_001171625|VEGFA|7422|vascular endothelial growth factor A	NM_001171626|VEGFA|7422|vascular endothelial growth factor A	NM_001171627|VEGFA|7422|vascular endothelial growth factor A	NM_001171628|VEGFA|7422|vascular endothelial growth factor A	NM_001171629|VEGFA|7422|vascular endothelial growth factor A	NM_001171630|VEGFA|7422|vascular endothelial growth factor A	NM_001204384|VEGFA|7422|vascular endothelial growth factor A	NM_001204385|VEGFA|7422|vascular endothelial growth factor A	NM_003376|VEGFA|7422|vascular endothelial growth factor A	BC058855|VEGFA|7422|vascular endothelial growth factor A	BC019867|VEGFA|7422|vascular endothelial growth factor A
hg19_v1_chr13_-_21635703_21635729	0.0144099	SOX2.p2	NM_014572|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)
hg19_v1_chr1_-_3447974_3448011	0.0144038	SOX2.p2	AB011539|MEGF6|1953|multiple EGF-like-domains 6
hg19_v1_chr6_-_47277645_47277645	0.0143892	SOX2.p2	AK315560|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr9_+_35538628_35538628	0.0143876	SOX2.p2	NM_001135999|RUSC2|9853|RUN and SH3 domain containing 2
hg19_v1_chr1_-_21501229_21501250	0.0143858	SOX2.p2	BC030578|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3	NM_001198803|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg19_v1_chrX_-_106449543_106449669	0.0143796	SOX2.p2	AK000137|NUP62CL|54830|nucleoporin 62kDa C-terminal like	BC016327|NUP62CL|54830|nucleoporin 62kDa C-terminal like	BC017799|NUP62CL|54830|nucleoporin 62kDa C-terminal like	NM_017681|NUP62CL|54830|nucleoporin 62kDa C-terminal like
hg19_v1_chr8_+_22022872_22022927	0.0143632	SOX2.p2	M22488|BMP1|649|bone morphogenetic protein 1	Y08723|BMP1|649|bone morphogenetic protein 1	Y08724|BMP1|649|bone morphogenetic protein 1	Y08725|BMP1|649|bone morphogenetic protein 1	U50330|BMP1|649|bone morphogenetic protein 1
hg19_v1_chr6_-_47277646_47277744	0.0143514	SOX2.p2	NM_014452|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr22_+_38864015_38864237	0.0143468	SOX2.p2	AK292102|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	AL035082|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	NM_006855|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	NM_016657|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	AK222930|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	BC001277|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	AK129888|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	AK223238|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	AL035081|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	BC096722|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	BC098131|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	BC098156|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	BC098336|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	CR456509|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	CU013108|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	CU013396|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	DQ891740|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	DQ894917|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3
hg19_v1_chr15_-_99789585_99789827	0.0142774	SOX2.p2	BC015728|TTC23|64927|tetratricopeptide repeat domain 23	AF411456|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040655|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040656|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040657|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040658|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040659|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040660|TTC23|64927|tetratricopeptide repeat domain 23	NM_022905|TTC23|64927|tetratricopeptide repeat domain 23
hg19_v1_chr2_-_217540722_217540847	0.0142754	SOX2.p2	L27560|IGFBP5|3488|insulin-like growth factor binding protein 5	AF147308|IGFBP5|3488|insulin-like growth factor binding protein 5
hg19_v1_chr5_+_57878901_57878938	0.0142539	SOX2.p2	AY026936|RAB3C|115827|RAB3C, member RAS oncogene family	BC013033|RAB3C|115827|RAB3C, member RAS oncogene family	NM_138453|RAB3C|115827|RAB3C, member RAS oncogene family
hg19_v1_chr1_+_955536_955550	0.0142168	SOX2.p2	
hg19_v1_chr19_-_53238290_53238306	0.0142108	SOX2.p2	BC028590|ZNF611|81856|zinc finger protein 611	AK091389|ZNF611|81856|zinc finger protein 611	NM_001161501|ZNF611|81856|zinc finger protein 611	NM_001161499|ZNF611|81856|zinc finger protein 611	NM_001161500|ZNF611|81856|zinc finger protein 611
hg19_v1_chr21_+_38739193_38739299	0.0141889	SOX2.p2	AB015282|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A
hg19_v1_chrM_+_5769_6092	0.0141706	SOX2.p2	
hg19_v1_chr6_-_47277640_47277640	0.0141661	SOX2.p2	AK001504|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr9_-_140444835_140444985	0.0141397	SOX2.p2	AK125060|PNPLA7|375775|patatin-like phospholipase domain containing 7	AK126267|PNPLA7|375775|patatin-like phospholipase domain containing 7	NM_001098537|PNPLA7|375775|patatin-like phospholipase domain containing 7	NM_152286|PNPLA7|375775|patatin-like phospholipase domain containing 7
hg19_v1_chr1_+_36273786_36273855	0.014135	SOX2.p2	AB046787|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4	BC152450|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4	NM_017629|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4
hg19_v1_chr16_-_72206348_72206348	0.0140783	SOX2.p2	AK122925|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	NM_001160213|PMFBP1|83449|polyamine modulated factor 1 binding protein 1
hg19_v1_chr17_+_29815018_29815105	0.0140738	SOX2.p2	AK097424|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)
hg19_v1_chr1_+_15272414_15272414	0.0140716	SOX2.p2	AY505122|KAZN|23254|kazrin, periplakin interacting protein	NM_001017999|KAZN|23254|kazrin, periplakin interacting protein
hg19_v1_chr17_+_59477169_59477304	0.01406	SOX2.p2	BC052566|TBX2|6909|T-box 2	NM_005994|TBX2|6909|T-box 2	BC070054|TBX2|6909|T-box 2
hg19_v1_chr4_-_2263808_2263839	0.0140553	SOX2.p2	BC002713|MXD4|10608|MAX dimerization protein 4
hg19_v1_chr13_+_24553838_24553892	0.0140507	SOX2.p2	
hg19_v1_chr16_-_1832304_1832566	0.0140224	SOX2.p2	BC041897|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC047441|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC007588|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC035065|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC024244|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	AK074190|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC065515|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3
hg19_v1_chr5_+_138677546_138677568	0.0140184	SOX2.p2	AK024552|PAIP2|51247|poly(A) binding protein interacting protein 2	AL136640|PAIP2|51247|poly(A) binding protein interacting protein 2	BC001716|PAIP2|51247|poly(A) binding protein interacting protein 2	AF151052|PAIP2|51247|poly(A) binding protein interacting protein 2
hg19_v1_chr19_+_47421932_47421932	0.0140179	SOX2.p2	AB051509|ARHGAP35|2909|Rho GTPase activating protein 35	AF159851|ARHGAP35|2909|Rho GTPase activating protein 35	BC131565|ARHGAP35|2909|Rho GTPase activating protein 35	BC150257|ARHGAP35|2909|Rho GTPase activating protein 35	NM_004491|ARHGAP35|2909|Rho GTPase activating protein 35
hg19_v1_chr20_-_55100980_55100980	0.0140095	SOX2.p2	AK131203|GCNT7|140687|glucosaminyl (N-acetyl) transferase family member 7	NM_080615|GCNT7|140687|glucosaminyl (N-acetyl) transferase family member 7
hg19_v1_chr20_+_57470200_57470251	0.0139966	SOX2.p2	AK093534|GNAS|2778|GNAS complex locus
hg19_v1_chr11_-_61735067_61735107	0.0139949	SOX2.p2	BC020300|FTH1|2495|ferritin, heavy polypeptide 1	BC015946|FTH1|2495|ferritin, heavy polypeptide 1	BC063514|FTH1|2495|ferritin, heavy polypeptide 1	BC011359|FTH1|2495|ferritin, heavy polypeptide 1	BC070494|FTH1|2495|ferritin, heavy polypeptide 1	AB062402|FTH1|2495|ferritin, heavy polypeptide 1	BC013724|FTH1|2495|ferritin, heavy polypeptide 1	BC073750|FTH1|2495|ferritin, heavy polypeptide 1	BC000857|FTH1|2495|ferritin, heavy polypeptide 1	BC035441|FTH1|2495|ferritin, heavy polypeptide 1	AK307190|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa	AK311818|FTH1|2495|ferritin, heavy polypeptide 1	BC016009|FTH1|2495|ferritin, heavy polypeptide 1	BC066341|FTH1|2495|ferritin, heavy polypeptide 1	BC066961|FTH1|2495|ferritin, heavy polypeptide 1	BC104643|FTH1|2495|ferritin, heavy polypeptide 1	BC105802|FTH1|2495|ferritin, heavy polypeptide 1	L20941|FTH1|2495|ferritin, heavy polypeptide 1	D28463|FTH1|2495|ferritin, heavy polypeptide 1
hg19_v1_chr7_+_93535819_93535819	0.013969	SOX2.p2	BC029367|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1	NM_021955|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1
hg19_v1_chr1_-_201915467_201915680	0.0139495	SOX2.p2	AK126474|LMOD1|25802|leiomodin 1 (smooth muscle)	BC001755|LMOD1|25802|leiomodin 1 (smooth muscle)	X54162|LMOD1|25802|leiomodin 1 (smooth muscle)	AK304852|LMOD1|25802|leiomodin 1 (smooth muscle)	BC080187|LMOD1|25802|leiomodin 1 (smooth muscle)	AK295824|LMOD1|25802|leiomodin 1 (smooth muscle)
hg19_v1_chr3_+_2933898_2933920	0.0139416	SOX2.p2	NM_001206956|CNTN4|152330|contactin 4	NM_175613|CNTN4|152330|contactin 4	AK057278|CNTN4|152330|contactin 4	AK314396|CNTN4|152330|contactin 4	BC026119|CNTN4|152330|contactin 4
hg19_v1_chr7_-_92747317_92747335	0.0138939	SOX2.p2	BC065769|SAMD9|54809|sterile alpha motif domain containing 9	AF445355|SAMD9|54809|sterile alpha motif domain containing 9	NM_001193307|SAMD9|54809|sterile alpha motif domain containing 9	NM_017654|SAMD9|54809|sterile alpha motif domain containing 9
hg19_v1_chr6_-_89927495_89927495	0.013877	SOX2.p2	AK313609|GABRR1|2569|gamma-aminobutyric acid (GABA) receptor, rho 1	NM_002042|GABRR1|2569|gamma-aminobutyric acid (GABA) receptor, rho 1
hg19_v1_chr6_-_146056896_146057158	0.0138669	SOX2.p2	AF284580|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)	NM_001018041|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)	NM_005670|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)	AF454491|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)	AK299497|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)
hg19_v1_chr19_+_38397880_38397945	0.0138462	SOX2.p2	BC150620|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3	BC036863|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3
hg19_v1_chr17_+_3572089_3572115	0.0138344	SOX2.p2	NM_001014764|TMEM93|83460|transmembrane protein 93	NM_031298|TMEM93|83460|transmembrane protein 93	BC001409|TMEM93|83460|transmembrane protein 93
hg19_v1_chr16_+_70333058_70333095	0.0138339	SOX2.p2	AK296868|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	NM_001014449|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	NM_001014451|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	NM_007242|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	AK316346|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	AK223115|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B
hg19_v1_chr10_+_5936348_5936348	0.0138331	SOX2.p2	AF380349|FBXO18|84893|F-box protein, helicase, 18	NM_032807|FBXO18|84893|F-box protein, helicase, 18
hg19_v1_chr1_+_955609_955681	0.0138293	SOX2.p2	AF016903|AGRN|375790|agrin	U84406|AGRN|375790|agrin
hg19_v1_chr4_-_153456152_153456436	0.013778	SOX2.p2	BC117244|FBXW7|55294|F-box and WD repeat domain containing 7	BC117246|FBXW7|55294|F-box and WD repeat domain containing 7	BC143944|FBXW7|55294|F-box and WD repeat domain containing 7	NM_033632|FBXW7|55294|F-box and WD repeat domain containing 7	CR749305|FBXW7|55294|F-box and WD repeat domain containing 7
hg19_v1_chr12_-_81331449_81331486	0.0137745	SOX2.p2	AK309256|LIN7A|8825|lin-7 homolog A (C. elegans)
hg19_v1_chr14_+_73603207_73603217	0.0137695	SOX2.p2	AJ008005|PSEN1|5663|presenilin 1
hg19_v1_chr6_-_17987852_17987880	0.0137667	SOX2.p2	BC062673|KIF13A|63971|kinesin family member 13A	NM_001105566|KIF13A|63971|kinesin family member 13A	NM_001105567|KIF13A|63971|kinesin family member 13A	NM_001105568|KIF13A|63971|kinesin family member 13A	NM_001243423|KIF13A|63971|kinesin family member 13A	NM_022113|KIF13A|63971|kinesin family member 13A
hg19_v1_chrX_-_117250624_117250827	0.013738	SOX2.p2	AL591986|KLHL13|90293|kelch-like 13 (Drosophila)	AK316509|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168302|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168303|KLHL13|90293|kelch-like 13 (Drosophila)
hg19_v1_chr1_+_236558715_236558929	0.0137311	SOX2.p2	AK096339|EDARADD|128178|EDAR-associated death domain	NM_080738|EDARADD|128178|EDAR-associated death domain	AY028914|EDARADD|128178|EDAR-associated death domain	AK291930|EDARADD|128178|EDAR-associated death domain	BC006533|EDARADD|128178|EDAR-associated death domain	AY071862|EDARADD|128178|EDAR-associated death domain
hg19_v1_chr21_-_33074101_33074136	0.0137241	SOX2.p2	AB032998|SCAF4|57466|SR-related CTD-associated factor 4	AK025748|SCAF4|57466|SR-related CTD-associated factor 4	AL117417|SCAF4|57466|SR-related CTD-associated factor 4
hg19_v1_chr1_-_43424324_43424520	0.0137097	SOX2.p2	BC118590|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	BC121804|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	K03195|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1
hg19_v1_chr5_-_140700286_140700333	0.0136949	SOX2.p2	U18062|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	BC032737|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	X97999|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	BC022798|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	BC013397|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	AK314837|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa
hg19_v1_chr10_+_35426709_35426763	0.0136788	SOX2.p2	NM_183011|CREM|1390|cAMP responsive element modulator	NM_183012|CREM|1390|cAMP responsive element modulator
hg19_v1_chr3_-_124842442_124842468	0.0136759	SOX2.p2	BC063528|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8
hg19_v1_chr1_-_44482996_44483011	0.0136667	SOX2.p2	NM_006934|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	NM_201649|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	S70609|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	S70612|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	AK315233|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9
hg19_v1_chr16_-_75300678_75300706	0.0136633	SOX2.p2	AK295809|BCAR1|9564|breast cancer anti-estrogen resistance 1	NM_001170716|BCAR1|9564|breast cancer anti-estrogen resistance 1
hg19_v1_chr12_-_40013842_40013842	0.0136345	SOX2.p2	AK314254|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2	NM_005164|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2
hg19_v1_chrY_-_21154560_21154979	0.0136307	SOX2.p2	S75311|CD24P4|938|CD24 molecule pseudogene 4	BT007404|CD24|100133941|CD24 molecule	DQ890636|CD24|100133941|CD24 molecule	DQ893812|CD24|100133941|CD24 molecule	L33930|CD24|100133941|CD24 molecule	M58664|CD24|100133941|CD24 molecule	X69397|CD24|100133941|CD24 molecule	BC064619|CD24|100133941|CD24 molecule	AK026603|CD24|100133941|CD24 molecule	NM_013230|CD24|100133941|CD24 molecule
hg19_v1_chr2_+_220492286_220492423	0.0135892	SOX2.p2	AY142112|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	NM_005070|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	NM_201574|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	AK314083|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	AK309025|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	AK289974|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	AK226122|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	BC146656|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3
hg19_v1_chr15_+_38544119_38544671	0.0135728	SOX2.p2	AK091222|SPRED1|161742|sprouty-related, EVH1 domain containing 1	BC137480|SPRED1|161742|sprouty-related, EVH1 domain containing 1	BC137481|SPRED1|161742|sprouty-related, EVH1 domain containing 1
hg19_v1_chr16_-_31085503_31085640	0.0135612	SOX2.p2	BC021997|ZNF668|79759|zinc finger protein 668	NM_024706|ZNF668|79759|zinc finger protein 668
hg19_v1_chr16_-_4562979_4563123	0.0135553	SOX2.p2	AK311295|C16orf5|29965|chromosome 16 open reading frame 5	BC007604|C16orf5|29965|chromosome 16 open reading frame 5
hg19_v1_chr20_+_34995443_34995443	0.0135521	SOX2.p2	NM_014902|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4
hg19_v1_chr3_+_129159138_129159138	0.0135296	SOX2.p2	BC028353|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg19_v1_chr1_-_95392449_95392498	0.0135152	SOX2.p2	CR541848|CNN3|1266|calponin 3, acidic	DQ893013|CNN3|1266|calponin 3, acidic	DQ896258|CNN3|1266|calponin 3, acidic
hg19_v1_chr1_+_205197031_205197136	0.0134892	SOX2.p2	AB007950|TMCC2|9911|transmembrane and coiled-coil domain family 2	NM_014858|TMCC2|9911|transmembrane and coiled-coil domain family 2	AK131419|TMCC2|9911|transmembrane and coiled-coil domain family 2
hg19_v1_chr8_-_110620220_110620232	0.0134831	SOX2.p2	AK297182|SYBU|55638|syntabulin (syntaxin-interacting)
hg19_v1_chr5_+_150400132_150400214	0.0134797	SOX2.p2	AK310242|GPX3|2878|glutathione peroxidase 3 (plasma)	BC066949|GPX3|2878|glutathione peroxidase 3 (plasma)	D00632|GPX3|2878|glutathione peroxidase 3 (plasma)	BC025956|GPX3|2878|glutathione peroxidase 3 (plasma)	BC035841|GPX3|2878|glutathione peroxidase 3 (plasma)	BC050378|GPX3|2878|glutathione peroxidase 3 (plasma)	BC013218|GPX3|2878|glutathione peroxidase 3 (plasma)	BC013601|GPX3|2878|glutathione peroxidase 3 (plasma)	AF217787|GPX3|2878|glutathione peroxidase 3 (plasma)
hg19_v1_chr14_-_61115906_61116274	0.0134793	SOX2.p2	BT007083|SIX1|6495|SIX homeobox 1	BC008874|SIX1|6495|SIX homeobox 1	NM_005982|SIX1|6495|SIX homeobox 1	X91868|SIX1|6495|SIX homeobox 1
hg19_v1_chr5_-_38595506_38595506	0.0134752	SOX2.p2	AK308158|LIFR|3977|leukemia inhibitory factor receptor alpha	AK309882|LIFR|3977|leukemia inhibitory factor receptor alpha	NM_002310|LIFR|3977|leukemia inhibitory factor receptor alpha
hg19_v1_chr10_+_98064084_98064252	0.013471	SOX2.p2	NM_001017520|DNTT|1791|deoxynucleotidyltransferase, terminal	NM_004088|DNTT|1791|deoxynucleotidyltransferase, terminal	AB046378|DNTT|1791|deoxynucleotidyltransferase, terminal	AK313615|DNTT|1791|deoxynucleotidyltransferase, terminal	M26144|DNTT|1791|deoxynucleotidyltransferase, terminal	BC012920|DNTT|1791|deoxynucleotidyltransferase, terminal	AK223317|DNTT|1791|deoxynucleotidyltransferase, terminal	DQ891465|DNTT|1791|deoxynucleotidyltransferase, terminal	DQ894645|DNTT|1791|deoxynucleotidyltransferase, terminal
hg19_v1_chr3_-_182880432_182880447	0.0134603	SOX2.p2	DQ892118|LAMP3|27074|lysosomal-associated membrane protein 3
hg19_v1_chr7_-_28998028_28998036	0.013437	SOX2.p2	NM_014817|TRIL|9865|TLR4 interactor with leucine-rich repeats
hg19_v1_chr3_+_14444062_14444076	0.0134196	SOX2.p2	AK303649|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6
hg19_v1_chr11_-_35441099_35441107	0.013387	SOX2.p2	NM_004171|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v1_chr6_-_16761600_16761794	0.0133774	SOX2.p2	BC039236|ATXN1|6310|ataxin 1	BC014548|ATXN1|6310|ataxin 1	X79204|ATXN1|6310|ataxin 1	AK311274|ATXN1|6310|ataxin 1	BC063120|ATXN1|6310|ataxin 1	BC047894|ATXN1|6310|ataxin 1	NM_000332|ATXN1|6310|ataxin 1	NM_001128164|ATXN1|6310|ataxin 1	BC011026|ATXN1|6310|ataxin 1
hg19_v1_chr6_+_43738177_43738318	0.0133674	SOX2.p2	AF022375|VEGFA|7422|vascular endothelial growth factor A
hg19_v1_chr16_+_57769667_57769781	0.0133623	SOX2.p2	AB209250|KATNB1|10300|katanin p80 (WD repeat containing) subunit B 1
hg19_v1_chr13_-_30169584_30169658	0.0133262	SOX2.p2	X59155|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	X57303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	AK312818|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	BC063303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
hg19_v1_chr4_+_41614933_41615091	0.0133125	SOX2.p2	AK299835|LIMCH1|22998|LIM and calponin homology domains 1
hg19_v1_chr11_+_71709951_71710108	0.0133008	SOX2.p2	NM_001039659|IL18BP|10068|interleukin 18 binding protein	NM_001039660|IL18BP|10068|interleukin 18 binding protein	NM_173044|IL18BP|10068|interleukin 18 binding protein	AF215907|IL18BP|10068|interleukin 18 binding protein	BC044215|IL18BP|10068|interleukin 18 binding protein	AF110801|IL18BP|10068|interleukin 18 binding protein	NM_005699|IL18BP|10068|interleukin 18 binding protein	NM_173042|IL18BP|10068|interleukin 18 binding protein
hg19_v1_chr1_+_213124008_213124038	0.013237	SOX2.p2	AK302675|VASH2|79805|vasohibin 2
hg19_v1_chr18_+_11851388_11851510	0.013234	SOX2.p2	NM_020412|CHMP1B|57132|charged multivesicular body protein 1B	AK314068|CHMP1B|57132|charged multivesicular body protein 1B	BC065933|CHMP1B|57132|charged multivesicular body protein 1B	BC012733|CHMP1B|57132|charged multivesicular body protein 1B	AF281064|CHMP1B|57132|charged multivesicular body protein 1B
hg19_v1_chr6_-_30654978_30654992	0.0132266	SOX2.p2	AB073600|PPP1R18|170954|protein phosphatase 1, regulatory subunit 18	BX647622|PPP1R18|170954|protein phosphatase 1, regulatory subunit 18
hg19_v1_chr2_-_38830068_38830077	0.0132106	SOX2.p2	BC008217|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like
hg19_v1_chr2_-_203776948_203776948	0.0131699	SOX2.p2	AK056092|WDR12|55759|WD repeat domain 12	NM_018256|WDR12|55759|WD repeat domain 12
hg19_v1_chrX_-_13835187_13835203	0.0131685	SOX2.p2	AK299675|GPM6B|2824|glycoprotein M6B	BC047295|GPM6B|2824|glycoprotein M6B
hg19_v1_chr16_-_48419148_48419357	0.0131525	SOX2.p2	BC018193|SIAH1|6477|seven in absentia homolog 1 (Drosophila)	BC035562|SIAH1|6477|seven in absentia homolog 1 (Drosophila)	NM_003031|SIAH1|6477|seven in absentia homolog 1 (Drosophila)	AK225895|SIAH1|6477|seven in absentia homolog 1 (Drosophila)	U76247|SIAH1|6477|seven in absentia homolog 1 (Drosophila)
hg19_v1_chr1_-_168698412_168698447	0.0131468	SOX2.p2	DQ892055|DPT|1805|dermatopontin	DQ895249|DPT|1805|dermatopontin	Z22865|DPT|1805|dermatopontin	BC033736|DPT|1805|dermatopontin	NM_001937|DPT|1805|dermatopontin
hg19_v1_chr11_+_36397534_36397587	0.0131285	SOX2.p2	NM_001160168|PRR5L|79899|proline rich 5 like	NM_024841|PRR5L|79899|proline rich 5 like	BX640959|PRR5L|79899|proline rich 5 like	AK024275|PRR5L|79899|proline rich 5 like
hg19_v1_chr6_-_44280986_44281067	0.0131051	SOX2.p2	AB033096|AARS2|57505|alanyl-tRNA synthetase 2, mitochondrial (putative)	BC131728|AARS2|57505|alanyl-tRNA synthetase 2, mitochondrial (putative)	NM_020745|AARS2|57505|alanyl-tRNA synthetase 2, mitochondrial (putative)
hg19_v1_chr10_-_115933884_115933981	0.013087	SOX2.p2	BC100670|C10orf118|55088|chromosome 10 open reading frame 118	BC103499|C10orf118|55088|chromosome 10 open reading frame 118	BC103504|C10orf118|55088|chromosome 10 open reading frame 118	BC105632|C10orf118|55088|chromosome 10 open reading frame 118	BC152306|C10orf118|55088|chromosome 10 open reading frame 118	BC107430|C10orf118|55088|chromosome 10 open reading frame 118	BC070368|C10orf118|55088|chromosome 10 open reading frame 118	BX537964|C10orf118|55088|chromosome 10 open reading frame 118	AK307517|C10orf118|55088|chromosome 10 open reading frame 118	AK092620|C10orf118|55088|chromosome 10 open reading frame 118	BC020842|C10orf118|55088|chromosome 10 open reading frame 118	BC030557|C10orf118|55088|chromosome 10 open reading frame 118
hg19_v1_chr16_+_56815703_56815767	0.0130516	SOX2.p2	NM_001242795|NUP93|9688|nucleoporin 93kDa	AK056637|NUP93|9688|nucleoporin 93kDa
hg19_v1_chrX_+_147582133_147582243	0.0130401	SOX2.p2	NM_001169122|AFF2|2334|AF4/FMR2 family, member 2	NM_001169123|AFF2|2334|AF4/FMR2 family, member 2	NM_001169124|AFF2|2334|AF4/FMR2 family, member 2	NM_001169125|AFF2|2334|AF4/FMR2 family, member 2	NM_002025|AFF2|2334|AF4/FMR2 family, member 2	U48436|AFF2|2334|AF4/FMR2 family, member 2	L76569|AFF2|2334|AF4/FMR2 family, member 2
hg19_v1_chr17_-_61819120_61819163	0.013039	SOX2.p2	BC043641|STRADA|92335|STE20-related kinase adaptor alpha	AL832407|STRADA|92335|STE20-related kinase adaptor alpha	AK301331|STRADA|92335|STE20-related kinase adaptor alpha	AK075005|STRADA|92335|STE20-related kinase adaptor alpha
hg19_v1_chr12_-_75603214_75603243	0.0130012	SOX2.p2	AK309245|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2	AB209994|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2	AK294269|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2
hg19_v1_chr12_+_124773709_124773709	0.0129755	SOX2.p2	AK126577|FAM101A|144347|family with sequence similarity 101, member A	NM_181709|FAM101A|144347|family with sequence similarity 101, member A
hg19_v1_chr5_+_125759076_125759298	0.012952	SOX2.p2	AK024966|GRAMD3|65983|GRAM domain containing 3	AK225829|GRAMD3|65983|GRAM domain containing 3	BC008590|GRAMD3|65983|GRAM domain containing 3	AK294656|GRAMD3|65983|GRAM domain containing 3	AK293307|GRAMD3|65983|GRAM domain containing 3	AK296267|GRAMD3|65983|GRAM domain containing 3	AY116970|GRAMD3|65983|GRAM domain containing 3
hg19_v1_chr9_-_139334250_139334266	0.0129519	SOX2.p2	BC028032|INPP5E|56623|inositol polyphosphate-5-phosphatase, 72 kDa	NM_019892|INPP5E|56623|inositol polyphosphate-5-phosphatase, 72 kDa
hg19_v1_chr10_-_123687380_123687671	0.0129397	SOX2.p2	AK296356|ATE1|11101|arginyltransferase 1	AF079098|ATE1|11101|arginyltransferase 1	AF079099|ATE1|11101|arginyltransferase 1	AK303604|ATE1|11101|arginyltransferase 1	AK313057|ATE1|11101|arginyltransferase 1	BC022026|ATE1|11101|arginyltransferase 1	NM_001001976|ATE1|11101|arginyltransferase 1	NM_007041|ATE1|11101|arginyltransferase 1
hg19_v1_chr19_-_38720330_38720338	0.0129383	SOX2.p2	AK297581|DPF1|8193|D4, zinc and double PHD fingers family 1
hg19_v1_chr1_+_87794548_87794570	0.0129373	SOX2.p2	AK292578|LMO4|8543|LIM domain only 4
hg19_v1_chr8_+_17433941_17433941	0.0129337	SOX2.p2	AK289450|PDGFRL|5157|platelet-derived growth factor receptor-like	NM_006207|PDGFRL|5157|platelet-derived growth factor receptor-like
hg19_v1_chr3_+_129159089_129159136	0.0129251	SOX2.p2	AF302154|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg19_v1_chrX_+_44732402_44732470	0.01291	SOX2.p2	NM_021140|KDM6A|7403|lysine (K)-specific demethylase 6A	AB208795|KDM6A|7403|lysine (K)-specific demethylase 6A
hg19_v1_chr18_-_74728963_74729028	0.0129092	SOX2.p2	CR536534|MBP|4155|myelin basic protein	CR541919|MBP|4155|myelin basic protein	M30515|MBP|4155|myelin basic protein	M30516|MBP|4155|myelin basic protein	BC008749|MBP|4155|myelin basic protein	BC101771|MBP|4155|myelin basic protein	BC101773|MBP|4155|myelin basic protein	BC143348|MBP|4155|myelin basic protein	BC143350|MBP|4155|myelin basic protein	M30047|MBP|4155|myelin basic protein	BC080654|MBP|4155|myelin basic protein	M13577|MBP|4155|myelin basic protein	AK289893|MBP|4155|myelin basic protein	AK098402|MBP|4155|myelin basic protein	AK128788|MBP|4155|myelin basic protein	CR627018|MBP|4155|myelin basic protein	AK128770|MBP|4155|myelin basic protein	BC068550|MBP|4155|myelin basic protein
hg19_v1_chr6_-_84140744_84140753	0.0128966	SOX2.p2	BC025246|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic
hg19_v1_chr15_-_40633122_40633167	0.0128899	SOX2.p2	AK125329|C15orf52|388115|chromosome 15 open reading frame 52	NM_207380|C15orf52|388115|chromosome 15 open reading frame 52
hg19_v1_chr21_-_27423423_27423464	0.0128868	SOX2.p2	
hg19_v1_chr18_-_21017816_21017926	0.012873	SOX2.p2	AK303553|TMEM241|85019|transmembrane protein 241	BC114510|TMEM241|85019|transmembrane protein 241	BC114561|TMEM241|85019|transmembrane protein 241	AK294916|TMEM241|85019|transmembrane protein 241	AK123623|TMEM241|85019|transmembrane protein 241	AK126247|TMEM241|85019|transmembrane protein 241	NM_032933|TMEM241|85019|transmembrane protein 241
hg19_v1_chr22_-_41682187_41682228	0.0128357	SOX2.p2	AK303524|RANGAP1|5905|Ran GTPase activating protein 1	NM_002883|RANGAP1|5905|Ran GTPase activating protein 1
hg19_v1_chr20_-_31331802_31331813	0.0128085	SOX2.p2	AK096307|COMMD7|149951|COMM domain containing 7	BC022073|COMMD7|149951|COMM domain containing 7	NM_001099339|COMMD7|149951|COMM domain containing 7	NM_053041|COMMD7|149951|COMM domain containing 7
hg19_v1_chr2_-_74007101_74007285	0.0127932	SOX2.p2	DQ891356|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	DQ894537|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	BC000346|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	AF023917|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	AK315271|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	CR627368|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	NM_003584|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)
hg19_v1_chr12_+_101188373_101188735	0.0127489	SOX2.p2	NM_178826|ANO4|121601|anoctamin 4	AK091591|ANO4|121601|anoctamin 4	AK316105|ANO4|121601|anoctamin 4	AK293810|ANO4|121601|anoctamin 4
hg19_v1_chr6_-_47277511_47277639	0.0127079	SOX2.p2	BC021572|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	AY358304|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr9_-_139334267_139334273	0.0126914	SOX2.p2	AL832846|INPP5E|56623|inositol polyphosphate-5-phosphatase, 72 kDa
hg19_v1_chr9_+_15422862_15422874	0.0126517	SOX2.p2	BC121011|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	BC121012|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	U66413|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	BC108743|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	U71300|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	AK293310|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa
hg19_v1_chr15_-_34502188_34502262	0.0126461	SOX2.p2	BC026234|C15orf29|79768|chromosome 15 open reading frame 29	AL136908|C15orf29|79768|chromosome 15 open reading frame 29	AK293021|C15orf29|79768|chromosome 15 open reading frame 29	BC111000|C15orf29|79768|chromosome 15 open reading frame 29	AK297904|C15orf29|79768|chromosome 15 open reading frame 29
hg19_v1_chr9_+_124461365_124461648	0.0126224	SOX2.p2	AF367051|DAB2IP|153090|DAB2 interacting protein
hg19_v1_chr1_+_11539177_11539294	0.0126178	SOX2.p2	AB593117|PTCHD2|57540|patched domain containing 2	AB037758|PTCHD2|57540|patched domain containing 2	NM_020780|PTCHD2|57540|patched domain containing 2
hg19_v1_chr1_+_68297985_68297991	0.0126026	SOX2.p2	AK124028|LOC100289178|100289178|uncharacterized LOC100289178
hg19_v1_chr6_+_32939974_32940002	0.0125694	SOX2.p2	BC007715|BRD2|6046|bromodomain containing 2	BC001885|BRD2|6046|bromodomain containing 2	BC000477|BRD2|6046|bromodomain containing 2
hg19_v1_chr9_-_72287097_72287311	0.0125365	SOX2.p2	AF029106|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1	AF047347|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1	NM_001163|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1
hg19_v1_chr5_+_99871023_99871123	0.0125356	SOX2.p2	AY359108|FAM174A|345757|family with sequence similarity 174, member A	AK289539|FAM174A|345757|family with sequence similarity 174, member A	BC027332|FAM174A|345757|family with sequence similarity 174, member A	NM_198507|FAM174A|345757|family with sequence similarity 174, member A
hg19_v1_chr11_+_114271372_114271432	0.0125326	SOX2.p2	AF156098|RBM7|10179|RNA binding motif protein 7	BC034381|RBM7|10179|RNA binding motif protein 7	NM_016090|RBM7|10179|RNA binding motif protein 7	AK225615|RBM7|10179|RNA binding motif protein 7	BC013320|RBM7|10179|RNA binding motif protein 7	BC070262|RBM7|10179|RNA binding motif protein 7
hg19_v1_chr6_-_31830551_31830592	0.0124772	SOX2.p2	BT007206|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR456717|NEU1|4758|sialidase 1 (lysosomal sialidase)	CR541916|NEU1|4758|sialidase 1 (lysosomal sialidase)	DQ890716|NEU1|4758|sialidase 1 (lysosomal sialidase)	DQ892186|NEU1|4758|sialidase 1 (lysosomal sialidase)	DQ893896|NEU1|4758|sialidase 1 (lysosomal sialidase)	DQ895380|NEU1|4758|sialidase 1 (lysosomal sialidase)	AB209011|NEU1|4758|sialidase 1 (lysosomal sialidase)	BC011900|NEU1|4758|sialidase 1 (lysosomal sialidase)	U84246|NEU1|4758|sialidase 1 (lysosomal sialidase)
hg19_v1_chr5_-_74062885_74063041	0.0124679	SOX2.p2	AK307839|GFM2|84340|G elongation factor, mitochondrial 2	BC015712|GFM2|84340|G elongation factor, mitochondrial 2	AY453587|GFM2|84340|G elongation factor, mitochondrial 2	BC030612|GFM2|84340|G elongation factor, mitochondrial 2	AK308422|GFM2|84340|G elongation factor, mitochondrial 2	AF111808|GFM2|84340|G elongation factor, mitochondrial 2	AK025314|GFM2|84340|G elongation factor, mitochondrial 2	AK315705|GFM2|84340|G elongation factor, mitochondrial 2	AF367997|GFM2|84340|G elongation factor, mitochondrial 2	NM_032380|GFM2|84340|G elongation factor, mitochondrial 2	NM_170681|GFM2|84340|G elongation factor, mitochondrial 2	NM_170691|GFM2|84340|G elongation factor, mitochondrial 2
hg19_v1_chr2_-_133427624_133427783	0.0124609	SOX2.p2	AY358628|LYPD1|116372|LY6/PLAUR domain containing 1	BC017318|LYPD1|116372|LY6/PLAUR domain containing 1	AK309849|LYPD1|116372|LY6/PLAUR domain containing 1	AK075487|LYPD1|116372|LY6/PLAUR domain containing 1	AK130005|LYPD1|116372|LY6/PLAUR domain containing 1	AK094501|LYPD1|116372|LY6/PLAUR domain containing 1	AK123029|LYPD1|116372|LY6/PLAUR domain containing 1
hg19_v1_chr1_-_201915715_201915717	0.0124545	SOX2.p2	NM_012134|LMOD1|25802|leiomodin 1 (smooth muscle)
hg19_v1_chr15_+_85427891_85427931	0.012445	SOX2.p2	AK291997|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	AK296075|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	AK298369|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	AK296074|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	AK296119|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	AK309578|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	AF309632|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	NM_004213|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	NM_201651|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	BC029788|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1
hg19_v1_chr3_+_73110809_73110809	0.0124419	SOX2.p2	BC051316|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2	BC064501|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2	NM_018029|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2
hg19_v1_chr2_+_181845368_181845372	0.0124384	SOX2.p2	BC092407|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3
hg19_v1_chr14_+_91580467_91580558	0.0124338	SOX2.p2	AK023200|C14orf159|80017|chromosome 14 open reading frame 159
hg19_v1_chr17_+_7960201_7960203	0.0124086	SOX2.p2	
hg19_v1_chr11_+_18720342_18720355	0.0124081	SOX2.p2	BC035692|TMEM86A|144110|transmembrane protein 86A	NM_153347|TMEM86A|144110|transmembrane protein 86A
hg19_v1_chr10_+_6244839_6244913	0.012406	SOX2.p2	NM_004566|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	L77662|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	AK291263|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	BC040482|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	AF056320|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
hg19_v1_chr16_-_71610948_71610997	0.0123393	SOX2.p2	X55675|TAT|6898|tyrosine aminotransferase	BC130534|TAT|6898|tyrosine aminotransferase	BC020707|TAT|6898|tyrosine aminotransferase	BC022292|TAT|6898|tyrosine aminotransferase	X52520|TAT|6898|tyrosine aminotransferase	AK313380|TAT|6898|tyrosine aminotransferase	NM_000353|TAT|6898|tyrosine aminotransferase
hg19_v1_chr12_+_72057676_72057936	0.0123233	SOX2.p2	NM_031435|THAP2|83591|THAP domain containing, apoptosis associated protein 2	AL136607|THAP2|83591|THAP domain containing, apoptosis associated protein 2	BC008358|THAP2|83591|THAP domain containing, apoptosis associated protein 2
hg19_v1_chr5_+_137514416_137514416	0.0122958	SOX2.p2	NM_005733|KIF20A|10112|kinesin family member 20A
hg19_v1_chr17_-_33759518_33759542	0.0122597	SOX2.p2	AK001122|SLFN12|55106|schlafen family member 12	BC035605|SLFN12|55106|schlafen family member 12	NM_018042|SLFN12|55106|schlafen family member 12
hg19_v1_chr19_+_50192440_50192561	0.0122532	SOX2.p2	AL359598|C19orf76|199800|chromosome 19 open reading frame 76
hg19_v1_chr12_+_54426831_54426902	0.0122307	SOX2.p2	NM_018953|HOXC5|3222|homeobox C5
hg19_v1_chr16_+_67465019_67465041	0.0121893	SOX2.p2	U26726|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2	BC036780|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2	BC064536|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2	NM_000196|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2	U14631|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2
hg19_v1_chr19_-_58609574_58609587	0.0121883	SOX2.p2	AY279352|ZSCAN18|65982|zinc finger and SCAN domain containing 18	BC022846|ZSCAN18|65982|zinc finger and SCAN domain containing 18	AK225548|ZSCAN18|65982|zinc finger and SCAN domain containing 18
hg19_v1_chr14_-_102976096_102976133	0.0121833	SOX2.p2	BX161460|ANKRD9|122416|ankyrin repeat domain 9	NM_152326|ANKRD9|122416|ankyrin repeat domain 9
hg19_v1_chr10_+_70939980_70940050	0.0121832	SOX2.p2	BC036112|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	NM_003171|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	AK290416|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	AK299670|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	AF042169|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	DQ891004|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)	DQ894183|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)
hg19_v1_chr1_-_156721084_156721274	0.0121814	SOX2.p2	AK292325|HDGF|3068|hepatoma-derived growth factor	DQ893406|HDGF|3068|hepatoma-derived growth factor	DQ896724|HDGF|3068|hepatoma-derived growth factor
hg19_v1_chr1_+_212475147_212475147	0.0121486	SOX2.p2	AK302202|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha	NM_001199756|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha
hg19_v1_chr14_-_74180341_74181182	0.0121322	SOX2.p2	CR457112|PNMA1|9240|paraneoplastic antigen MA1	BC039577|PNMA1|9240|paraneoplastic antigen MA1	AK290980|PNMA1|9240|paraneoplastic antigen MA1	AF320308|PNMA1|9240|paraneoplastic antigen MA1	BC007712|PNMA1|9240|paraneoplastic antigen MA1	NM_006029|PNMA1|9240|paraneoplastic antigen MA1
hg19_v1_chr10_-_123687936_123688064	0.0120821	SOX2.p2	AK299101|ATE1|11101|arginyltransferase 1	AK308926|ATE1|11101|arginyltransferase 1
hg19_v1_chr17_+_66031814_66031866	0.0120212	SOX2.p2	NM_002266|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	U09559|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	U28386|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	AK024833|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	AK058111|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	AK291954|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC005978|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC013257|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC053343|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC146905|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
hg19_v1_chr12_-_6961044_6961229	0.0120184	SOX2.p2	BC036512|CDCA3|83461|cell division cycle associated 3
hg19_v1_chr19_-_11616395_11616659	0.0120077	SOX2.p2	HQ258023|ZNF653|115950|zinc finger protein 653	AY072704|ZNF653|115950|zinc finger protein 653	BC014187|ZNF653|115950|zinc finger protein 653	AK314986|ZNF653|115950|zinc finger protein 653	BC016816|ZNF653|115950|zinc finger protein 653
hg19_v1_chr20_+_30102313_30102354	0.0119866	SOX2.p2	AJ420895|HM13|81502|histocompatibility (minor) 13	DQ896206|HM13|81502|histocompatibility (minor) 13	AF515663|HM13|81502|histocompatibility (minor) 13
hg19_v1_chr5_-_22853435_22853458	0.0119816	SOX2.p2	BC047608|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)
hg19_v1_chr6_-_108582225_108582252	0.0119617	SOX2.p2	BC015179|SNX3|8724|sorting nexin 3	BC014580|SNX3|8724|sorting nexin 3	AK289476|SNX3|8724|sorting nexin 3
hg19_v1_chr3_-_187009469_187009809	0.0119499	SOX2.p2	BC106945|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	BC106946|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK291686|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK129893|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK304334|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK300663|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	BX647237|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK291157|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	CR749615|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	BC039724|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	NM_001031849|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	NM_001879|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	NM_139125|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)
hg19_v1_chr3_+_82035288_82035316	0.0119398	SOX2.p2	
hg19_v1_chr19_+_36139233_36139272	0.0119305	SOX2.p2	D28426|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)	BC002478|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)	X54473|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)	X13923|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)
hg19_v1_chr19_-_46148606_46148841	0.0119187	SOX2.p2	AK296258|EML2|24139|echinoderm microtubule associated protein like 2	AK294668|EML2|24139|echinoderm microtubule associated protein like 2	NM_001193268|EML2|24139|echinoderm microtubule associated protein like 2	BC029304|EML2|24139|echinoderm microtubule associated protein like 2
hg19_v1_chr11_+_64949413_64949466	0.0119151	SOX2.p2	BC017200|CAPN1|823|calpain 1, (mu/I) large subunit
hg19_v1_chr8_+_23104153_23104332	0.0118745	SOX2.p2	AK092500|CHMP7|91782|charged multivesicular body protein 7	AL833843|CHMP7|91782|charged multivesicular body protein 7	BC019110|CHMP7|91782|charged multivesicular body protein 7	AK296592|CHMP7|91782|charged multivesicular body protein 7	BC004344|CHMP7|91782|charged multivesicular body protein 7
hg19_v1_chrM_+_16029_16097	0.0118443	SOX2.p2	
hg19_v1_chr6_+_32937092_32937111	0.0118366	SOX2.p2	
hg19_v1_chr16_-_53737713_53737802	0.0118317	SOX2.p2	BC136433|RPGRIP1L|23322|RPGRIP1-like	AK096333|RPGRIP1L|23322|RPGRIP1-like	AK308390|RPGRIP1L|23322|RPGRIP1-like	BC017977|RPGRIP1L|23322|RPGRIP1-like	CR749645|RPGRIP1L|23322|RPGRIP1-like	AK307929|RPGRIP1L|23322|RPGRIP1-like	EF565106|RPGRIP1L|23322|RPGRIP1-like	NM_001127897|RPGRIP1L|23322|RPGRIP1-like	NM_015272|RPGRIP1L|23322|RPGRIP1-like	AK304790|RPGRIP1L|23322|RPGRIP1-like
hg19_v1_chr7_+_120965420_120965420	0.0118065	SOX2.p2	AF152584|WNT16|51384|wingless-type MMTV integration site family, member 16	NM_016087|WNT16|51384|wingless-type MMTV integration site family, member 16
hg19_v1_chr8_+_85095501_85095585	0.0118038	SOX2.p2	AK095560|RALYL|138046|RALY RNA binding protein-like	AK094543|RALYL|138046|RALY RNA binding protein-like	AF495529|RALYL|138046|RALY RNA binding protein-like	AF495530|RALYL|138046|RALY RNA binding protein-like	NM_173848|RALYL|138046|RALY RNA binding protein-like
hg19_v1_chr4_-_40936640_40936716	0.0117987	SOX2.p2	BC088372|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2
hg19_v1_chr17_-_3571819_3571878	0.01179	SOX2.p2	AF277318|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	U90913|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	AF234997|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	AK001327|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	AK315408|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	BC023980|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3
hg19_v1_chr3_+_129159075_129159087	0.0117514	SOX2.p2	AK124140|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK293852|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK023000|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	BC003045|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	BC004238|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg19_v1_chr20_+_34824379_34824399	0.011747	SOX2.p2	AL117419|C20orf4|25980|chromosome 20 open reading frame 4
hg19_v1_chr1_+_165797060_165797112	0.0117468	SOX2.p2	AF236637|UCK2|7371|uridine-cytidine kinase 2	AK294537|UCK2|7371|uridine-cytidine kinase 2	AB062451|UCK2|7371|uridine-cytidine kinase 2
hg19_v1_chr22_-_51016343_51016505	0.0117422	SOX2.p2	BC143071|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	BC150318|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	D87812|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	U62733|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	BC142954|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	NM_001145137|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)
hg19_v1_chr16_+_31724530_31724563	0.0117089	SOX2.p2	NM_001130913|ZNF720|124411|zinc finger protein 720	BC055408|ZNF720|124411|zinc finger protein 720
hg19_v1_chr5_+_86563819_86563833	0.0116862	SOX2.p2	
hg19_v1_chr5_+_52284903_52285337	0.0116582	SOX2.p2	NM_002203|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	AK307952|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	X17033|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143505|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143508|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143509|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143511|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143512|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)
hg19_v1_chr19_-_58609606_58609729	0.0116557	SOX2.p2	AK022957|ZSCAN18|65982|zinc finger and SCAN domain containing 18	AY280799|ZSCAN18|65982|zinc finger and SCAN domain containing 18	NM_001145543|ZSCAN18|65982|zinc finger and SCAN domain containing 18	NM_001145544|ZSCAN18|65982|zinc finger and SCAN domain containing 18	NM_023926|ZSCAN18|65982|zinc finger and SCAN domain containing 18
hg19_v1_chr10_+_123922940_123923011	0.0116547	SOX2.p2	BC039311|TACC2|10579|transforming, acidic coiled-coil containing protein 2
hg19_v1_chr13_+_32420828_32420977	0.0116513	SOX2.p2	BC021729|EEF1DP3|196549|eukaryotic translation elongation factor 1 delta pseudogene 3
hg19_v1_chrM_+_15551_15561	0.0116479	SOX2.p2	
hg19_v1_chr12_+_49761161_49761628	0.0116442	SOX2.p2	BC017767|SPATS2|65244|spermatogenesis associated, serine-rich 2	AL833614|SPATS2|65244|spermatogenesis associated, serine-rich 2	BC048299|SPATS2|65244|spermatogenesis associated, serine-rich 2	AK292334|SPATS2|65244|spermatogenesis associated, serine-rich 2	AK023202|SPATS2|65244|spermatogenesis associated, serine-rich 2	BX648916|SPATS2|65244|spermatogenesis associated, serine-rich 2	BC032441|SPATS2|65244|spermatogenesis associated, serine-rich 2
hg19_v1_chr2_+_70056920_70057023	0.011644	SOX2.p2	EU832645|GMCL1|64395|germ cell-less homolog 1 (Drosophila)	EU832722|GMCL1|64395|germ cell-less homolog 1 (Drosophila)
hg19_v1_chrX_-_118726852_118727112	0.0116423	SOX2.p2	EF165090|NKRF|55922|NFKB repressing factor	EF165091|NKRF|55922|NFKB repressing factor	EF165093|NKRF|55922|NFKB repressing factor	AJ011812|NKRF|55922|NFKB repressing factor	EF158333|NKRF|55922|NFKB repressing factor	EF216688|NKRF|55922|NFKB repressing factor	EF216689|NKRF|55922|NFKB repressing factor	NM_001173488|NKRF|55922|NFKB repressing factor
hg19_v1_chr22_-_20104695_20104728	0.0116362	SOX2.p2	BC017184|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)
hg19_v1_chr19_+_13135809_13135860	0.0116176	SOX2.p2	HQ258405|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)	FJ861276|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)	U07811|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)
hg19_v1_chr2_-_188312872_188313020	0.0116063	SOX2.p2	DQ280491|CALCRL|10203|calcitonin receptor-like	U17473|CALCRL|10203|calcitonin receptor-like	L76380|CALCRL|10203|calcitonin receptor-like	AK291630|CALCRL|10203|calcitonin receptor-like	AK292998|CALCRL|10203|calcitonin receptor-like	NM_005795|CALCRL|10203|calcitonin receptor-like
hg19_v1_chr7_+_96635289_96635289	0.0115887	SOX2.p2	NM_005222|DLX6|1750|distal-less homeobox 6
hg19_v1_chr3_+_129159150_129159175	0.0115865	SOX2.p2	AK298526|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK299903|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	EU832629|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	EU832704|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg19_v1_chrX_+_119737905_119737982	0.0115685	SOX2.p2	BC095461|MCTS1|28985|malignant T cell amplified sequence 1
hg19_v1_chr19_+_1026627_1026697	0.0115682	SOX2.p2	AK024835|CNN2|1265|calponin 2	AK057960|CNN2|1265|calponin 2	AK293171|CNN2|1265|calponin 2	BC141818|CNN2|1265|calponin 2	BC141833|CNN2|1265|calponin 2	D83735|CNN2|1265|calponin 2	AK222924|CNN2|1265|calponin 2	AK300788|CNN2|1265|calponin 2	D86059|CNN2|1265|calponin 2	BC148264|CNN2|1265|calponin 2	CR541810|CNN2|1265|calponin 2	CR541831|CNN2|1265|calponin 2	AY927514|CNN2|1265|calponin 2
hg19_v1_chr19_+_49838734_49838797	0.011546	SOX2.p2	X14046|CD37|951|CD37 molecule	BC106752|CD37|951|CD37 molecule	BT019851|CD37|951|CD37 molecule	CR541877|CD37|951|CD37 molecule
hg19_v1_chr16_-_1832571_1832575	0.01147	SOX2.p2	AK057850|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3
hg19_v1_chr1_-_200992824_200992839	0.0114635	SOX2.p2	AB007918|KIF21B|23046|kinesin family member 21B	NM_001252100|KIF21B|23046|kinesin family member 21B	NM_001252102|KIF21B|23046|kinesin family member 21B	NM_001252103|KIF21B|23046|kinesin family member 21B	NM_017596|KIF21B|23046|kinesin family member 21B
hg19_v1_chr5_+_172483285_172483483	0.0114615	SOX2.p2	BX647768|C5orf41|153222|chromosome 5 open reading frame 41	NM_001168393|C5orf41|153222|chromosome 5 open reading frame 41	NM_001168394|C5orf41|153222|chromosome 5 open reading frame 41	NM_153607|C5orf41|153222|chromosome 5 open reading frame 41	AK300043|C5orf41|153222|chromosome 5 open reading frame 41	AY139008|C5orf41|153222|chromosome 5 open reading frame 41	BC041709|C5orf41|153222|chromosome 5 open reading frame 41	AY174896|C5orf41|153222|chromosome 5 open reading frame 41	AK124117|C5orf41|153222|chromosome 5 open reading frame 41	BX647573|C5orf41|153222|chromosome 5 open reading frame 41	AK291677|C5orf41|153222|chromosome 5 open reading frame 41
hg19_v1_chr12_+_112204711_112204786	0.0114411	SOX2.p2	AY621070|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	BC002967|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	X05409|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	AK223373|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	AK301375|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	Y00109|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	AK314856|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	BC071839|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	CR456991|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)
hg19_v1_chr12_-_122240827_122240888	0.0114379	SOX2.p2	
hg19_v1_chr9_+_12774988_12775045	0.0114358	SOX2.p2	NM_203403|C9orf150|286343|chromosome 9 open reading frame 150	AB073606|C9orf150|286343|chromosome 9 open reading frame 150	AK095824|C9orf150|286343|chromosome 9 open reading frame 150	BC036923|C9orf150|286343|chromosome 9 open reading frame 150
hg19_v1_chr6_-_108582167_108582221	0.011415	SOX2.p2	BC008444|SNX3|8724|sorting nexin 3
hg19_v1_chr11_-_71752099_71752188	0.0114123	SOX2.p2	AK290509|NUMA1|4926|nuclear mitotic apparatus protein 1	AK309041|NUMA1|4926|nuclear mitotic apparatus protein 1
hg19_v1_chr2_-_73964427_73964516	0.0113808	SOX2.p2	AK291071|TPRKB|51002|TP53RK binding protein	AF060921|TPRKB|51002|TP53RK binding protein	AK097254|TPRKB|51002|TP53RK binding protein	AY643713|TPRKB|51002|TP53RK binding protein	BC029492|TPRKB|51002|TP53RK binding protein	AK295239|TPRKB|51002|TP53RK binding protein	AF151879|TPRKB|51002|TP53RK binding protein	NM_016058|TPRKB|51002|TP53RK binding protein
hg19_v1_chr19_-_14629227_14629233	0.0113808	SOX2.p2	AK312624|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1
hg19_v1_chr2_+_130737234_130737236	0.0113567	SOX2.p2	NM_032144|RAB6C|84084|RAB6C, member RAS oncogene family	AL136727|RAB6C|84084|RAB6C, member RAS oncogene family
hg19_v1_chrX_-_110654373_110654373	0.0113561	SOX2.p2	AJ003112|DCX|1641|doublecortin	NM_000555|DCX|1641|doublecortin
hg19_v1_chr5_-_146889420_146889512	0.0112961	SOX2.p2	EU007906|DPYSL3|1809|dihydropyrimidinase-like 3	EU832163|DPYSL3|1809|dihydropyrimidinase-like 3	EU832257|DPYSL3|1809|dihydropyrimidinase-like 3
hg19_v1_chr21_-_35288027_35288157	0.0112794	SOX2.p2	BT019836|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	CR456822|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	BC021233|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	AK124187|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	AK222962|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	AK311796|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	BC022865|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	X83218|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	AK222608|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	NM_001697|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
hg19_v1_chr11_-_85437457_85437510	0.0112783	SOX2.p2	BX647671|SYTL2|54843|synaptotagmin-like 2	AK127504|SYTL2|54843|synaptotagmin-like 2	NM_206927|SYTL2|54843|synaptotagmin-like 2	NM_206928|SYTL2|54843|synaptotagmin-like 2
hg19_v1_chr21_-_33104387_33104399	0.0112741	SOX2.p2	BC043353|SCAF4|57466|SR-related CTD-associated factor 4
hg19_v1_chr1_-_40367539_40367686	0.0112404	SOX2.p2	AK296078|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	BC030694|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	BC011864|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	NM_001033081|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	NM_001033082|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	NM_005376|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)
hg19_v1_chr6_-_33385662_33385709	0.0112225	SOX2.p2	BC005890|CUTA|51596|cutA divalent cation tolerance homolog (E. coli)	AF106943|CUTA|51596|cutA divalent cation tolerance homolog (E. coli)	BC107751|CUTA|51596|cutA divalent cation tolerance homolog (E. coli)
hg19_v1_chr15_+_93443559_93443602	0.0112019	SOX2.p2	BC007347|CHD2|1106|chromodomain helicase DNA binding protein 2	BC020810|CHD2|1106|chromodomain helicase DNA binding protein 2
hg19_v1_chr11_-_47664014_47664212	0.0111996	SOX2.p2	DQ891810|MTCH2|23788|mitochondrial carrier 2	DQ894993|MTCH2|23788|mitochondrial carrier 2	AK223097|MTCH2|23788|mitochondrial carrier 2	BC000875|MTCH2|23788|mitochondrial carrier 2	AY380792|MTCH2|23788|mitochondrial carrier 2	AF085361|MTCH2|23788|mitochondrial carrier 2	AF176008|MTCH2|23788|mitochondrial carrier 2	AK295218|MTCH2|23788|mitochondrial carrier 2	AK313032|MTCH2|23788|mitochondrial carrier 2	NM_014342|MTCH2|23788|mitochondrial carrier 2
hg19_v1_chr19_-_44831907_44832079	0.0111818	SOX2.p2	AL122078|ZFP112|7771|zinc finger protein 112 homolog (mouse)	AK026230|ZFP112|7771|zinc finger protein 112 homolog (mouse)
hg19_v1_chrM_+_5513_5584	0.0111789	SOX2.p2	
hg19_v1_chr13_+_24553919_24553948	0.011138	SOX2.p2	BX648244|SPATA13|221178|spermatogenesis associated 13
hg19_v1_chr5_-_36876730_36876797	0.0111224	SOX2.p2	AK000901|LOC646719|646719|uncharacterized LOC646719
hg19_v1_chr1_-_176176283_176176354	0.0111123	SOX2.p2	BC020845|RFWD2|64326|ring finger and WD repeat domain 2	AK314750|RFWD2|64326|ring finger and WD repeat domain 2
hg19_v1_chr15_-_31947541_31947541	0.011103	SOX2.p2	AJ430383|OTUD7A|161725|OTU domain containing 7A	NM_130901|OTUD7A|161725|OTU domain containing 7A
hg19_v1_chr4_+_102734982_102735035	0.0110787	SOX2.p2	NM_001083907|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1	AK000713|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1
hg19_v1_chr10_+_103825123_103825162	0.0110707	SOX2.p2	NM_024747|HPS6|79803|Hermansky-Pudlak syndrome 6	BC014993|HPS6|79803|Hermansky-Pudlak syndrome 6	AF536238|HPS6|79803|Hermansky-Pudlak syndrome 6	BC011594|HPS6|79803|Hermansky-Pudlak syndrome 6
hg19_v1_chr10_-_105110898_105110906	0.0110603	SOX2.p2	AK309105|PCGF6|84108|polycomb group ring finger 6
hg19_v1_chr5_+_133861685_133861926	0.0110596	SOX2.p2	D87076|PHF15|23338|PHD finger protein 15	NM_015288|PHF15|23338|PHD finger protein 15	AK290471|PHF15|23338|PHD finger protein 15
hg19_v1_chrX_+_51636608_51636798	0.0110411	SOX2.p2	NM_001005333|MAGED1|9500|melanoma antigen family D, 1	NM_006986|MAGED1|9500|melanoma antigen family D, 1	AF258554|MAGED1|9500|melanoma antigen family D, 1	AK298574|MAGED1|9500|melanoma antigen family D, 1	AK308706|MAGED1|9500|melanoma antigen family D, 1	BC014070|MAGED1|9500|melanoma antigen family D, 1	AK314053|MAGED1|9500|melanoma antigen family D, 1	AK074092|MAGED1|9500|melanoma antigen family D, 1	AF217963|MAGED1|9500|melanoma antigen family D, 1	AF300328|MAGED1|9500|melanoma antigen family D, 1
hg19_v1_chr19_-_6279927_6280004	0.0110281	SOX2.p2	D14539|MLLT1|4298|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1	NM_005934|MLLT1|4298|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1
hg19_v1_chr7_-_20826423_20826434	0.0110199	SOX2.p2	AK299947|SP8|221833|Sp8 transcription factor
hg19_v1_chr5_+_125758818_125758868	0.0110193	SOX2.p2	NM_001146320|GRAMD3|65983|GRAM domain containing 3	NM_001146321|GRAMD3|65983|GRAM domain containing 3	NM_023927|GRAMD3|65983|GRAM domain containing 3
hg19_v1_chr16_-_72206023_72206063	0.0110144	SOX2.p2	AL136795|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	AK315004|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	BC028423|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	AK093285|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	NM_031293|PMFBP1|83449|polyamine modulated factor 1 binding protein 1
hg19_v1_chr1_-_43424536_43424608	0.0110086	SOX2.p2	AK292791|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	AK293306|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	AK296736|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	AK312403|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	AB208987|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1
hg19_v1_chr12_-_102874299_102874306	0.0109623	SOX2.p2	BC152321|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	M27544|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg19_v1_chr16_+_1128780_1128868	0.01095	SOX2.p2	AK308381|SSTR5|6755|somatostatin receptor 5	NM_001053|SSTR5|6755|somatostatin receptor 5	DQ448303|SSTR5|6755|somatostatin receptor 5	DQ448304|SSTR5|6755|somatostatin receptor 5
hg19_v1_chr14_-_88793250_88793255	0.0109124	SOX2.p2	AF279890|KCNK10|54207|potassium channel, subfamily K, member 10	NM_021161|KCNK10|54207|potassium channel, subfamily K, member 10
hg19_v1_chrX_-_117107700_117107759	0.0109118	SOX2.p2	AK125356|KLHL13|90293|kelch-like 13 (Drosophila)	NM_033495|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168300|KLHL13|90293|kelch-like 13 (Drosophila)
hg19_v1_chr21_+_27107671_27107726	0.0109016	SOX2.p2	BC035031|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa	D13318|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa	AK223164|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa
hg19_v1_chr6_-_105850976_105851014	0.0108991	SOX2.p2	AK314195|PREP|5550|prolyl endopeptidase	NM_002726|PREP|5550|prolyl endopeptidase
hg19_v1_chr17_+_73452663_73452813	0.0108928	SOX2.p2	NM_014738|KIAA0195|9772|KIAA0195	AK308160|KIAA0195|9772|KIAA0195	BC042942|KIAA0195|9772|KIAA0195	AK304819|KIAA0195|9772|KIAA0195	D83779|KIAA0195|9772|KIAA0195	BC045540|KIAA0195|9772|KIAA0195
hg19_v1_chr11_-_101787252_101787252	0.010889	SOX2.p2	BC049170|ANGPTL5|253935|angiopoietin-like 5	BC053957|ANGPTL5|253935|angiopoietin-like 5	NM_178127|ANGPTL5|253935|angiopoietin-like 5
hg19_v1_chr17_+_56406294_56406375	0.0108709	SOX2.p2	AK311311|LOC100506779|100506779|uncharacterized LOC100506779	AK311208|LOC100506779|100506779|uncharacterized LOC100506779
hg19_v1_chrX_+_117526665_117526710	0.0108704	SOX2.p2	AL834210|WDR44|54521|WD repeat domain 44
hg19_v1_chr16_-_1464634_1464722	0.0108641	SOX2.p2	AM944365|UNKL|64718|unkempt homolog (Drosophila)-like	BC011924|UNKL|64718|unkempt homolog (Drosophila)-like	AK124977|UNKL|64718|unkempt homolog (Drosophila)-like	NM_001037125|UNKL|64718|unkempt homolog (Drosophila)-like	NM_001193388|UNKL|64718|unkempt homolog (Drosophila)-like
hg19_v1_chr2_-_56151273_56151297	0.0108629	SOX2.p2	AK293058|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1	NM_001039348|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1	NM_001039349|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1
hg19_v1_chr14_+_91580713_91580785	0.0108343	SOX2.p2	AK123532|C14orf159|80017|chromosome 14 open reading frame 159	BC065558|C14orf159|80017|chromosome 14 open reading frame 159	BX248782|C14orf159|80017|chromosome 14 open reading frame 159	AK091394|C14orf159|80017|chromosome 14 open reading frame 159	AK022564|C14orf159|80017|chromosome 14 open reading frame 159
hg19_v1_chr1_-_114354906_114355097	0.0108152	SOX2.p2	AK002082|RSBN1|54665|round spermatid basic protein 1	BC026155|RSBN1|54665|round spermatid basic protein 1	NM_018364|RSBN1|54665|round spermatid basic protein 1	AK292552|RSBN1|54665|round spermatid basic protein 1
hg19_v1_chr15_+_52311432_52311436	0.0107811	SOX2.p2	CR749401|MAPK6|5597|mitogen-activated protein kinase 6
hg19_v1_chr12_+_131438451_131438455	0.0107367	SOX2.p2	BX649116|GPR133|283383|G protein-coupled receptor 133	NM_198827|GPR133|283383|G protein-coupled receptor 133
hg19_v1_chrX_+_119737743_119737834	0.0107315	SOX2.p2	NM_014060|MCTS1|28985|malignant T cell amplified sequence 1	AK311993|MCTS1|28985|malignant T cell amplified sequence 1	AB034206|MCTS1|28985|malignant T cell amplified sequence 1
hg19_v1_chr15_-_101791674_101791798	0.0107285	SOX2.p2	AB071402|CHSY1|22856|chondroitin sulfate synthase 1
hg19_v1_chr7_-_20826503_20826565	0.0107199	SOX2.p2	AK056857|SP8|221833|Sp8 transcription factor	AK307969|SP8|221833|Sp8 transcription factor	AY167047|SP8|221833|Sp8 transcription factor	BC038669|SP8|221833|Sp8 transcription factor	AK290465|SP8|221833|Sp8 transcription factor	NM_182700|SP8|221833|Sp8 transcription factor	NM_198956|SP8|221833|Sp8 transcription factor
hg19_v1_chr17_-_7145742_7145784	0.0106996	SOX2.p2	AK312205|GABARAP|11337|GABA(A) receptor-associated protein	AB030711|GABARAP|11337|GABA(A) receptor-associated protein	AF183425|GABARAP|11337|GABA(A) receptor-associated protein	AF067171|GABARAP|11337|GABA(A) receptor-associated protein	NM_007278|GABARAP|11337|GABA(A) receptor-associated protein	AK098634|GABARAP|11337|GABA(A) receptor-associated protein
hg19_v1_chr15_+_93443418_93443555	0.0106924	SOX2.p2	AF006514|CHD2|1106|chromodomain helicase DNA binding protein 2	NM_001042572|CHD2|1106|chromodomain helicase DNA binding protein 2	NM_001271|CHD2|1106|chromodomain helicase DNA binding protein 2	AK292850|CHD2|1106|chromodomain helicase DNA binding protein 2	BC107885|CHD2|1106|chromodomain helicase DNA binding protein 2
hg19_v1_chr4_-_85887543_85887543	0.0106793	SOX2.p2	NM_014991|WDFY3|23001|WD repeat and FYVE domain containing 3
hg19_v1_chr16_+_24788568_24788680	0.0106709	SOX2.p2	AY035864|TNRC6A|27327|trinucleotide repeat containing 6A
hg19_v1_chr9_+_133710641_133710694	0.0106664	SOX2.p2	M30833|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase	X16416|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase
hg19_v1_chr2_-_31637598_31637624	0.0106311	SOX2.p2	NM_000379|XDH|7498|xanthine dehydrogenase
hg19_v1_chr19_-_12992249_12992334	0.0106282	SOX2.p2	AK075449|DNASE2|1777|deoxyribonuclease II, lysosomal	AF047016|DNASE2|1777|deoxyribonuclease II, lysosomal	AB004574|DNASE2|1777|deoxyribonuclease II, lysosomal	AK297493|DNASE2|1777|deoxyribonuclease II, lysosomal	AF045937|DNASE2|1777|deoxyribonuclease II, lysosomal	AK315358|DNASE2|1777|deoxyribonuclease II, lysosomal	BC065209|DNASE2|1777|deoxyribonuclease II, lysosomal	AF060222|DNASE2|1777|deoxyribonuclease II, lysosomal	AK311145|DNASE2|1777|deoxyribonuclease II, lysosomal	NM_001375|DNASE2|1777|deoxyribonuclease II, lysosomal
hg19_v1_chr4_+_78078332_78078391	0.0106206	SOX2.p2	NM_004354|CCNG2|901|cyclin G2	AK292029|CCNG2|901|cyclin G2	BC032518|CCNG2|901|cyclin G2
hg19_v1_chr2_+_219283809_219283872	0.0105938	SOX2.p2	NM_007127|VIL1|7429|villin 1	AK223398|VIL1|7429|villin 1	AK300965|VIL1|7429|villin 1	AK313709|VIL1|7429|villin 1
hg19_v1_chr15_-_58306185_58306294	0.0105514	SOX2.p2	AB015228|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2	AB015227|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2	NM_170697|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2
hg19_v1_chr3_-_116164321_116164341	0.0105321	SOX2.p2	AK315286|LSAMP|4045|limbic system-associated membrane protein
hg19_v1_chr18_-_21851902_21851921	0.010495	SOX2.p2	AK001079|OSBPL1A|114876|oxysterol binding protein-like 1A
hg19_v1_chr3_-_120169493_120170182	0.0104805	SOX2.p2	BC000055|FSTL1|11167|follistatin-like 1	U06863|FSTL1|11167|follistatin-like 1	AK300356|FSTL1|11167|follistatin-like 1	AK289388|FSTL1|11167|follistatin-like 1	AK291138|FSTL1|11167|follistatin-like 1	AK311050|FSTL1|11167|follistatin-like 1	AK300436|FSTL1|11167|follistatin-like 1	BX647421|FSTL1|11167|follistatin-like 1	AK312261|FSTL1|11167|follistatin-like 1	NM_007085|FSTL1|11167|follistatin-like 1
hg19_v1_chr4_-_10118500_10118572	0.0104747	SOX2.p2	NM_005112|WDR1|9948|WD repeat domain 1	NM_017491|WDR1|9948|WD repeat domain 1
hg19_v1_chr15_+_85144219_85144343	0.0104746	SOX2.p2	AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2	BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2	NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2	NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2	NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2	AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2
hg19_v1_chr13_+_111767586_111767873	0.0104397	SOX2.p2	BC060776|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	NM_001113511|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	NM_001113512|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	NM_145735|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	BC033905|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	AL834228|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	EU832819|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	GQ129214|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7
hg19_v1_chr19_+_3762671_3762677	0.0104285	SOX2.p2	BC065273|MRPL54|116541|mitochondrial ribosomal protein L54
hg19_v1_chr14_-_54955714_54955796	0.0104021	SOX2.p2	AB001106|GMFB|2764|glia maturation factor, beta	BX647679|GMFB|2764|glia maturation factor, beta	NM_004124|GMFB|2764|glia maturation factor, beta
hg19_v1_chr6_-_152958533_152958533	0.0103939	SOX2.p2	AF495910|SYNE1|23345|spectrin repeat containing, nuclear envelope 1	NM_182961|SYNE1|23345|spectrin repeat containing, nuclear envelope 1
hg19_v1_chrX_+_53449804_53449889	0.0103727	SOX2.p2	AK304179|RIBC1|158787|RIB43A domain with coiled-coils 1	AK057345|RIBC1|158787|RIB43A domain with coiled-coils 1	NM_144968|RIBC1|158787|RIB43A domain with coiled-coils 1	AK292871|RIBC1|158787|RIB43A domain with coiled-coils 1	AK290346|RIBC1|158787|RIB43A domain with coiled-coils 1	BC036767|RIBC1|158787|RIB43A domain with coiled-coils 1	NM_001031745|RIBC1|158787|RIB43A domain with coiled-coils 1
hg19_v1_chr9_+_123837235_123837289	0.0103636	SOX2.p2	AK307387|CNTRL|11064|centriolin	BC089415|CNTRL|11064|centriolin
hg19_v1_chr1_-_154155637_154155640	0.0103542	SOX2.p2	BC015403|TPM3|7170|tropomyosin 3
hg19_v1_chr6_-_75915753_75915808	0.0103469	SOX2.p2	AK307558|COL12A1|1303|collagen, type XII, alpha 1
hg19_v1_chrX_-_15872882_15872891	0.0103356	SOX2.p2	BC001117|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	BC071867|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg19_v1_chr4_-_100484824_100484824	0.0103207	SOX2.p2	BC028373|RG9MTD2|93587|RNA (guanine-9-) methyltransferase domain containing 2	NM_152292|RG9MTD2|93587|RNA (guanine-9-) methyltransferase domain containing 2
hg19_v1_chr7_-_47621741_47621825	0.0103018	SOX2.p2	AK092864|TNS3|64759|tensin 3	NM_022748|TNS3|64759|tensin 3
hg19_v1_chr7_-_140179333_140179368	0.010294	SOX2.p2	NM_001145125|MKRN1|23608|makorin ring finger protein 1	NM_013446|MKRN1|23608|makorin ring finger protein 1
hg19_v1_chrM_-_15569_15794	0.0102909	SOX2.p2	
hg19_v1_chr6_+_27107060_27107087	0.0102799	SOX2.p2	BC016336|HIST1H4I|8294|histone cluster 1, H4i	BC075806|HIST1H4I|8294|histone cluster 1, H4i	BC066250|HIST1H4I|8294|histone cluster 1, H4i	BC067496|HIST1H4I|8294|histone cluster 1, H4i	BC067497|HIST1H4I|8294|histone cluster 1, H4i	HQ257982|HIST2H4B|554313|histone cluster 2, H4b	NM_003495|HIST1H4I|8294|histone cluster 1, H4i
hg19_v1_chr14_-_21572789_21572862	0.0102619	SOX2.p2	NM_001102454|ZNF219|51222|zinc finger protein 219
hg19_v1_chr6_-_17987693_17987827	0.0102554	SOX2.p2	AJ291578|KIF13A|63971|kinesin family member 13A	AJ291579|KIF13A|63971|kinesin family member 13A	BC127115|KIF13A|63971|kinesin family member 13A	BC127116|KIF13A|63971|kinesin family member 13A	AY014403|KIF13A|63971|kinesin family member 13A	AY014404|KIF13A|63971|kinesin family member 13A
hg19_v1_chr16_+_27561441_27561487	0.0102445	SOX2.p2	NM_015202|KIAA0556|23247|KIAA0556	AB011128|KIAA0556|23247|KIAA0556	BC150276|KIAA0556|23247|KIAA0556	BC131508|KIAA0556|23247|KIAA0556
hg19_v1_chr6_-_30585016_30585022	0.0102239	SOX2.p2	AJ544537|PPP1R10|5514|protein phosphatase 1, regulatory subunit 10	AK307406|PPP1R10|5514|protein phosphatase 1, regulatory subunit 10	NM_002714|PPP1R10|5514|protein phosphatase 1, regulatory subunit 10
hg19_v1_chr20_+_30102237_30102260	0.0101973	SOX2.p2	NM_030789|HM13|81502|histocompatibility (minor) 13	NM_178580|HM13|81502|histocompatibility (minor) 13	NM_178581|HM13|81502|histocompatibility (minor) 13	NM_178582|HM13|81502|histocompatibility (minor) 13	AK314410|HM13|81502|histocompatibility (minor) 13	BC008938|HM13|81502|histocompatibility (minor) 13	BC008959|HM13|81502|histocompatibility (minor) 13	AY169310|HM13|81502|histocompatibility (minor) 13	AY169311|HM13|81502|histocompatibility (minor) 13	AY169312|HM13|81502|histocompatibility (minor) 13	AK075283|HM13|81502|histocompatibility (minor) 13	DQ168450|HM13|81502|histocompatibility (minor) 13
hg19_v1_chr14_+_96829849_96829887	0.010193	SOX2.p2	AK000796|C14orf129|51527|chromosome 14 open reading frame 129	AK314423|C14orf129|51527|chromosome 14 open reading frame 129	AF151044|C14orf129|51527|chromosome 14 open reading frame 129
hg19_v1_chr6_-_52668599_52668764	0.0101905	SOX2.p2	BC053578|GSTA1|2938|glutathione S-transferase alpha 1	BC110891|GSTA1|2938|glutathione S-transferase alpha 1	M15872|GSTA1|2938|glutathione S-transferase alpha 1	AK293371|GSTA1|2938|glutathione S-transferase alpha 1	M14777|GSTA1|2938|glutathione S-transferase alpha 1	M21758|GSTA1|2938|glutathione S-transferase alpha 1	M25627|GSTA1|2938|glutathione S-transferase alpha 1	NM_145740|GSTA1|2938|glutathione S-transferase alpha 1	AK310324|GSTA1|2938|glutathione S-transferase alpha 1
hg19_v1_chr2_-_198540583_198540767	0.0101533	SOX2.p2	AK055136|RFTN2|130132|raftlin family member 2	NM_144629|RFTN2|130132|raftlin family member 2	BC111069|RFTN2|130132|raftlin family member 2
hg19_v1_chr1_-_154155658_154155658	0.0101507	SOX2.p2	BC073144|TPM3|7170|tropomyosin 3
hg19_v1_chr16_-_29937539_29937570	0.010146	SOX2.p2	BC036228|KCTD13|253980|potassium channel tetramerisation domain containing 13	NM_178863|KCTD13|253980|potassium channel tetramerisation domain containing 13
hg19_v1_chr3_+_138067678_138067758	0.0101354	SOX2.p2	AK295640|MRAS|22808|muscle RAS oncogene homolog	NM_001252092|MRAS|22808|muscle RAS oncogene homolog
hg19_v1_chrX_+_103357106_103357262	0.010102	SOX2.p2	NM_001143978|ZCCHC18|644353|zinc finger, CCHC domain containing 18
hg19_v1_chr11_-_63684570_63684709	0.0100982	SOX2.p2	AB593132|RCOR2|283248|REST corepressor 2
hg19_v1_chr4_+_54243909_54244009	0.010083	SOX2.p2	BC024016|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	BC052959|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AM392758|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AK300398|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AK308145|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr6_-_31745048_31745107	0.0100825	SOX2.p2	AK304058|C6orf27|80737|chromosome 6 open reading frame 27	NM_025258|C6orf27|80737|chromosome 6 open reading frame 27
hg19_v1_chr11_-_85780899_85780922	0.0100453	SOX2.p2	AK300275|PICALM|8301|phosphatidylinositol binding clathrin assembly protein	NM_001206947|PICALM|8301|phosphatidylinositol binding clathrin assembly protein
hg19_v1_chr1_-_212588073_212588234	0.0100391	SOX2.p2	AK295224|TMEM206|55248|transmembrane protein 206	CR457268|TMEM206|55248|transmembrane protein 206	BC006320|TMEM206|55248|transmembrane protein 206
hg19_v1_chr6_-_47277354_47277423	0.00999668	SOX2.p2	AB209394|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr14_+_23305792_23305808	0.00999537	SOX2.p2	NM_004995|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	AK312657|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	AK291325|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	BC064803|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)
hg19_v1_chr12_-_45270157_45270246	0.00998594	SOX2.p2	NM_001145108|NELL2|4753|NEL-like 2 (chicken)	NM_006159|NELL2|4753|NEL-like 2 (chicken)
hg19_v1_chr12_-_48152860_48152888	0.00998591	SOX2.p2	AK092448|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3	NM_001098531|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3
hg19_v1_chr4_+_2819888_2819939	0.00995467	SOX2.p2	NM_001145856|SH3BP2|6452|SH3-domain binding protein 2	U56386|SH3BP2|6452|SH3-domain binding protein 2
hg19_v1_chr10_-_73848263_73848274	0.0099062	SOX2.p2	AK292328|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2	AK294008|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2	AK307091|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2
hg19_v1_chr19_+_3762650_3762670	0.00987652	SOX2.p2	NM_172251|MRPL54|116541|mitochondrial ribosomal protein L54
hg19_v1_chr4_+_160188997_160188997	0.00987093	SOX2.p2	AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2	NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2
hg19_v1_chr17_-_7518124_7518489	0.00986718	SOX2.p2	BC067272|FXR2|9513|fragile X mental retardation, autosomal homolog 2	BC020090|FXR2|9513|fragile X mental retardation, autosomal homolog 2	NM_004860|FXR2|9513|fragile X mental retardation, autosomal homolog 2
hg19_v1_chr16_-_29937523_29937530	0.0098654	SOX2.p2	AK289630|KCTD13|253980|potassium channel tetramerisation domain containing 13
hg19_v1_chr10_+_52750904_52750911	0.00984154	SOX2.p2	NM_001098512|PRKG1|5592|protein kinase, cGMP-dependent, type I
hg19_v1_chr19_+_11071719_11071781	0.00981554	SOX2.p2	BC035916|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg19_v1_chr19_+_13135745_13135776	0.00981292	SOX2.p2	L31881|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)	BC117113|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)	BC117115|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)
hg19_v1_chr3_+_14444083_14444149	0.00973599	SOX2.p2	NM_001134367|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	NM_001134368|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	NM_003043|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	AK308417|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	BC111489|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	AK307284|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	AK309534|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	BC137128|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	BC137129|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	BC144490|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	BC006252|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	AB209172|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6
hg19_v1_chr16_+_66637934_66638059	0.00973239	SOX2.p2	AK056324|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3
hg19_v1_chr9_-_86536283_86536495	0.00973054	SOX2.p2	AK297689|KIF27|55582|kinesin family member 27	BC140788|KIF27|55582|kinesin family member 27	AY237536|KIF27|55582|kinesin family member 27	AY237537|KIF27|55582|kinesin family member 27	AY237538|KIF27|55582|kinesin family member 27	NM_017576|KIF27|55582|kinesin family member 27
hg19_v1_chr2_+_71295685_71295813	0.00972996	SOX2.p2	BC001029|NAGK|55577|N-acetylglucosamine kinase	BC005371|NAGK|55577|N-acetylglucosamine kinase	AK001812|NAGK|55577|N-acetylglucosamine kinase	AK097223|NAGK|55577|N-acetylglucosamine kinase	AK222645|NAGK|55577|N-acetylglucosamine kinase	BC036843|NAGK|55577|N-acetylglucosamine kinase	AJ242910|NAGK|55577|N-acetylglucosamine kinase	DQ892674|NAGK|55577|N-acetylglucosamine kinase	DQ895916|NAGK|55577|N-acetylglucosamine kinase	CR457271|NAGK|55577|N-acetylglucosamine kinase
hg19_v1_chr16_+_68573115_68573281	0.00971495	SOX2.p2	BC140886|ZFP90|146198|zinc finger protein 90 homolog (mouse)	BC140887|ZFP90|146198|zinc finger protein 90 homolog (mouse)	AK316251|ZFP90|146198|zinc finger protein 90 homolog (mouse)	AK074332|ZFP90|146198|zinc finger protein 90 homolog (mouse)	AK304152|ZFP90|146198|zinc finger protein 90 homolog (mouse)	BC040486|ZFP90|146198|zinc finger protein 90 homolog (mouse)
hg19_v1_chr22_+_25595824_25595865	0.0097067	SOX2.p2	NM_004076|CRYBB3|1417|crystallin, beta B3	U71216|CRYBB3|1417|crystallin, beta B3	BC069479|CRYBB3|1417|crystallin, beta B3	BC102021|CRYBB3|1417|crystallin, beta B3	BC102022|CRYBB3|1417|crystallin, beta B3	BC107482|CRYBB3|1417|crystallin, beta B3	CR456427|CRYBB3|1417|crystallin, beta B3
hg19_v1_chr6_-_105850958_105850958	0.00968738	SOX2.p2	BC030636|PREP|5550|prolyl endopeptidase
hg19_v1_chr17_+_77030471_77030574	0.00967719	SOX2.p2	AF329840|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1	NM_198593|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1	BC021553|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1
hg19_v1_chr16_+_88636657_88636808	0.00965514	SOX2.p2	NM_144604|ZC3H18|124245|zinc finger CCCH-type containing 18
hg19_v1_chr1_+_81771844_81772011	0.00964111	SOX2.p2	BC031321|LPHN2|23266|latrophilin 2	AK123422|LPHN2|23266|latrophilin 2
hg19_v1_chr15_+_75074417_75074433	0.00964092	SOX2.p2	BC106073|CSK|1445|c-src tyrosine kinase	NM_001127190|CSK|1445|c-src tyrosine kinase	NM_004383|CSK|1445|c-src tyrosine kinase	AK290531|CSK|1445|c-src tyrosine kinase
hg19_v1_chrX_+_106161589_106161589	0.00963932	SOX2.p2	AK312515|CLDN2|9075|claudin 2	NM_001171095|CLDN2|9075|claudin 2
hg19_v1_chr2_-_31637553_31637590	0.00961383	SOX2.p2	U39487|XDH|7498|xanthine dehydrogenase	D11456|XDH|7498|xanthine dehydrogenase	U06117|XDH|7498|xanthine dehydrogenase
hg19_v1_chr16_+_58498216_58498308	0.00960787	SOX2.p2	AK126574|NDRG4|65009|NDRG family member 4	CR936733|NDRG4|65009|NDRG family member 4
hg19_v1_chr3_-_45267804_45267846	0.00960593	SOX2.p2	NM_015444|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)
hg19_v1_chr1_-_27226928_27226935	0.00960459	SOX2.p2	EU832444|GPATCH3|63906|G patch domain containing 3	EU832527|GPATCH3|63906|G patch domain containing 3
hg19_v1_chr4_+_158141735_158142034	0.00960364	SOX2.p2	NM_000826|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	NM_001083619|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	NM_001083620|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	BC028736|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	AL832605|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	AB209567|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	BC010574|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	L20814|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2
hg19_v1_chr11_+_92085261_92085261	0.0095983	SOX2.p2	NM_001008781|FAT3|120114|FAT tumor suppressor homolog 3 (Drosophila)
hg19_v1_chr1_+_192127591_192127616	0.00959541	SOX2.p2	NM_130782|RGS18|64407|regulator of G-protein signaling 18	AK292015|RGS18|64407|regulator of G-protein signaling 18	BC020632|RGS18|64407|regulator of G-protein signaling 18	AK057114|RGS18|64407|regulator of G-protein signaling 18	AK315377|RGS18|64407|regulator of G-protein signaling 18	AF268036|RGS18|64407|regulator of G-protein signaling 18	AF076642|RGS18|64407|regulator of G-protein signaling 18
hg19_v1_chr1_-_145610869_145610904	0.00959313	SOX2.p2	U93867|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)	BC002586|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)	NM_006468|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)
hg19_v1_chr14_-_102975996_102976070	0.00958566	SOX2.p2	AK291868|ANKRD9|122416|ankyrin repeat domain 9
hg19_v1_chr9_-_98269686_98269714	0.00958211	SOX2.p2	NM_001083606|PTCH1|5727|patched 1	U43148|PTCH1|5727|patched 1
hg19_v1_chr15_+_66694216_66694219	0.00957584	SOX2.p2	AK294322|MAP2K1|5604|mitogen-activated protein kinase kinase 1
hg19_v1_chr14_+_24521099_24521253	0.00957569	SOX2.p2	NM_138360|LRRC16B|90668|leucine rich repeat containing 16B
hg19_v1_chr6_+_83073954_83074000	0.00957172	SOX2.p2	AK074790|TPBG|7162|trophoblast glycoprotein	NM_001166392|TPBG|7162|trophoblast glycoprotein
hg19_v1_chr11_+_64889699_64889801	0.00957023	SOX2.p2	NM_004927|MRPL49|740|mitochondrial ribosomal protein L49	AK129986|MRPL49|740|mitochondrial ribosomal protein L49	AK311821|MRPL49|740|mitochondrial ribosomal protein L49	AK129795|MRPL49|740|mitochondrial ribosomal protein L49
hg19_v1_chr14_+_74035865_74036130	0.0095618	SOX2.p2	DQ893488|ACOT2|10965|acyl-CoA thioesterase 2	DQ896406|ACOT2|10965|acyl-CoA thioesterase 2	BC004436|ACOT2|10965|acyl-CoA thioesterase 2	BC006500|ACOT2|10965|acyl-CoA thioesterase 2	L40401|ACOT2|10965|acyl-CoA thioesterase 2	AY005822|ACOT2|10965|acyl-CoA thioesterase 2
hg19_v1_chr6_-_138189313_138189388	0.00955754	SOX2.p2	
hg19_v1_chr7_+_99775346_99775382	0.00954322	SOX2.p2	AJ007798|STAG3|10734|stromal antigen 3
hg19_v1_chr2_+_48757292_48757358	0.0095397	SOX2.p2	AK314464|STON1|11037|stonin 1	NM_001198595|STON1|11037|stonin 1	NM_006873|STON1|11037|stonin 1	CR936807|STON1|11037|stonin 1
hg19_v1_chr4_-_146859568_146859786	0.00953893	SOX2.p2	AK091130|ZNF827|152485|zinc finger protein 827	NM_178835|ZNF827|152485|zinc finger protein 827	BC117407|ZNF827|152485|zinc finger protein 827	BC143577|ZNF827|152485|zinc finger protein 827	AF450485|ZNF827|152485|zinc finger protein 827	AK225805|ZNF827|152485|zinc finger protein 827
hg19_v1_chr5_+_86563594_86563777	0.00952504	SOX2.p2	CR749722|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1
hg19_v1_chr17_+_79213104_79213165	0.00952413	SOX2.p2	BC127837|C17orf89|284184|chromosome 17 open reading frame 89	NM_001086521|C17orf89|284184|chromosome 17 open reading frame 89	BC079831|C17orf89|284184|chromosome 17 open reading frame 89
hg19_v1_chr2_+_32288579_32288822	0.00948758	SOX2.p2	AB029006|SPAST|6683|spastin	BC150260|SPAST|6683|spastin	NM_014946|SPAST|6683|spastin	NM_199436|SPAST|6683|spastin	AJ246001|SPAST|6683|spastin
hg19_v1_chr9_-_14313899_14313907	0.00944795	SOX2.p2	AK299605|NFIB|4781|nuclear factor I/B
hg19_v1_chr12_-_16758312_16758338	0.00943246	SOX2.p2	NM_001243611|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr11_-_61735108_61735187	0.00943146	SOX2.p2	NM_002032|FTH1|2495|ferritin, heavy polypeptide 1
hg19_v1_chr7_-_6388408_6388613	0.00942638	SOX2.p2	AK311878|C7orf70|84792|chromosome 7 open reading frame 70	AF533707|C7orf70|84792|chromosome 7 open reading frame 70	BC006110|C7orf70|84792|chromosome 7 open reading frame 70	NM_001037163|C7orf70|84792|chromosome 7 open reading frame 70	BC142977|C7orf70|84792|chromosome 7 open reading frame 70
hg19_v1_chr17_-_4458618_4458730	0.00941217	SOX2.p2	EU832503|MYBBP1A|10514|MYB binding protein (P160) 1a	BC050546|MYBBP1A|10514|MYB binding protein (P160) 1a	AF147709|MYBBP1A|10514|MYB binding protein (P160) 1a	AK303150|MYBBP1A|10514|MYB binding protein (P160) 1a	AK301622|MYBBP1A|10514|MYB binding protein (P160) 1a	AK307948|MYBBP1A|10514|MYB binding protein (P160) 1a	NM_001105538|MYBBP1A|10514|MYB binding protein (P160) 1a	NM_014520|MYBBP1A|10514|MYB binding protein (P160) 1a
hg19_v1_chr1_+_241695433_241695742	0.00939549	SOX2.p2	NM_003679|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)	AK310937|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)	BC005297|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)	AK291558|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)	AF056032|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)	Y13153|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)
hg19_v1_chr2_-_208030613_208030699	0.00936647	SOX2.p2	AB015132|KLF7|8609|Kruppel-like factor 7 (ubiquitous)	NM_003709|KLF7|8609|Kruppel-like factor 7 (ubiquitous)	AK314439|KLF7|8609|Kruppel-like factor 7 (ubiquitous)
hg19_v1_chr22_+_20105145_20105170	0.0093639	SOX2.p2	CU013156|RANBP1|5902|RAN binding protein 1	CU013444|RANBP1|5902|RAN binding protein 1
hg19_v1_chr9_-_98269480_98269480	0.00935774	SOX2.p2	AB189440|PTCH1|5727|patched 1	NM_001083607|PTCH1|5727|patched 1
hg19_v1_chr16_-_75272524_75272557	0.00935108	SOX2.p2	AK124844|BCAR1|9564|breast cancer anti-estrogen resistance 1
hg19_v1_chr17_-_76921076_76921155	0.00934095	SOX2.p2	X54533|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg19_v1_chr7_-_115608366_115608366	0.00932539	SOX2.p2	AJ608795|TFEC|22797|transcription factor EC	NM_001244583|TFEC|22797|transcription factor EC
hg19_v1_chr1_+_82266081_82266081	0.00931647	SOX2.p2	AF104266|LPHN2|23266|latrophilin 2	AF104938|LPHN2|23266|latrophilin 2	AF104939|LPHN2|23266|latrophilin 2	NM_012302|LPHN2|23266|latrophilin 2
hg19_v1_chr14_-_23451704_23451847	0.00930628	SOX2.p2	BC034968|AJUBA|84962|ajuba LIM protein	NM_032876|AJUBA|84962|ajuba LIM protein
hg19_v1_chr19_-_57968106_57968106	0.00929395	SOX2.p2	NM_020633|VN1R1|57191|vomeronasal 1 receptor 1
hg19_v1_chr1_+_109419748_109419826	0.00927567	SOX2.p2	AK295563|GPSM2|29899|G-protein signaling modulator 2	BC027732|GPSM2|29899|G-protein signaling modulator 2
hg19_v1_chr17_-_56032494_56032858	0.00926373	SOX2.p2	BC056882|CUEDC1|404093|CUE domain containing 1
hg19_v1_chr1_-_27226937_27226965	0.00924531	SOX2.p2	BC007767|GPATCH3|63906|G patch domain containing 3	AL833886|GPATCH3|63906|G patch domain containing 3	AK308100|GPATCH3|63906|G patch domain containing 3	AK022517|GPATCH3|63906|G patch domain containing 3	AK057930|GPATCH3|63906|G patch domain containing 3	AK303183|GPATCH3|63906|G patch domain containing 3	CR936767|GPATCH3|63906|G patch domain containing 3	NM_022078|GPATCH3|63906|G patch domain containing 3
hg19_v1_chr12_+_72079873_72079886	0.0092303	SOX2.p2	BC008596|TMEM19|55266|transmembrane protein 19	NM_018279|TMEM19|55266|transmembrane protein 19
hg19_v1_chr6_-_83775453_83775597	0.00921156	SOX2.p2	BC101512|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC101538|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC143617|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC036049|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	AB126062|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	NM_198920|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC053645|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	AK298205|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC057845|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein
hg19_v1_chr1_-_154155685_154155695	0.00915443	SOX2.p2	AK308007|TPM3|7170|tropomyosin 3
hg19_v1_chr5_+_53813494_53813596	0.00912668	SOX2.p2	AK304195|SNX18|112574|sorting nexin 18	NM_001145427|SNX18|112574|sorting nexin 18	BC060791|SNX18|112574|sorting nexin 18	BC067860|SNX18|112574|sorting nexin 18	NM_001102575|SNX18|112574|sorting nexin 18	NM_052870|SNX18|112574|sorting nexin 18
hg19_v1_chr7_-_47621635_47621692	0.00909774	SOX2.p2	CR749644|TNS3|64759|tensin 3
hg19_v1_chr7_-_155604815_155604966	0.00909644	SOX2.p2	L38518|SHH|6469|sonic hedgehog	NM_000193|SHH|6469|sonic hedgehog
hg19_v1_chr19_-_6279797_6279809	0.00909357	SOX2.p2	
hg19_v1_chr11_+_111808017_111808150	0.00909109	SOX2.p2	BC035509|DIXDC1|85458|DIX domain containing 1	BC064479|DIXDC1|85458|DIX domain containing 1	BC128600|DIXDC1|85458|DIX domain containing 1
hg19_v1_chr15_-_31283617_31283918	0.00906165	SOX2.p2	AK000320|MTMR10|54893|myotubularin related protein 10	AM392869|MTMR10|54893|myotubularin related protein 10	BC094750|MTMR10|54893|myotubularin related protein 10	BC063296|MTMR10|54893|myotubularin related protein 10	NM_017762|MTMR10|54893|myotubularin related protein 10
hg19_v1_chr20_-_36152952_36152952	0.00905679	SOX2.p2	NM_001167823|BLCAP|10904|bladder cancer associated protein
hg19_v1_chrX_+_102611379_102611462	0.00905186	SOX2.p2	NM_001006612|WBP5|51186|WW domain binding protein 5	NM_001006613|WBP5|51186|WW domain binding protein 5	NM_001006614|WBP5|51186|WW domain binding protein 5	NM_016303|WBP5|51186|WW domain binding protein 5	AF125535|WBP5|51186|WW domain binding protein 5	BC023544|WBP5|51186|WW domain binding protein 5	AK312190|WBP5|51186|WW domain binding protein 5	AL833152|WBP5|51186|WW domain binding protein 5
hg19_v1_chr20_+_35202956_35202956	0.00904981	SOX2.p2	NM_001199515|TGIF2|60436|TGFB-induced factor homeobox 2	NM_001199535|TGIF2-C20ORF24|100527943|TGIF2-C20orf24 readthrough
hg19_v1_chr6_+_41040891_41040960	0.00904628	SOX2.p2	BC039244|NFYA|4800|nuclear transcription factor Y, alpha
hg19_v1_chr4_-_54457723_54457765	0.00904194	SOX2.p2	AK056823|LNX1|84708|ligand of numb-protein X 1	NM_001126328|LNX1|84708|ligand of numb-protein X 1
hg19_v1_chr17_+_37026111_37026117	0.00903184	SOX2.p2	NM_006148|LASP1|3927|LIM and SH3 protein 1
hg19_v1_chr7_-_115670774_115670798	0.00902575	SOX2.p2	D43945|TFEC|22797|transcription factor EC	BC029891|TFEC|22797|transcription factor EC
hg19_v1_chr22_-_38713384_38713444	0.0090251	SOX2.p2	NM_152221|CSNK1E|1454|casein kinase 1, epsilon
hg19_v1_chr7_-_80548322_80548546	0.00897356	SOX2.p2	AK312478|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C	BC030690|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C	AK299322|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
hg19_v1_chr4_+_54243829_54243899	0.00891016	SOX2.p2	BC017724|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AL136910|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AY366510|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr6_-_105627857_105627857	0.00889587	SOX2.p2	AK314101|POPDC3|64208|popeye domain containing 3	NM_022361|POPDC3|64208|popeye domain containing 3
hg19_v1_chr6_-_167275657_167275800	0.00889567	SOX2.p2	NM_001006932|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	AB209116|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg19_v1_chr1_-_154155698_154155724	0.00889346	SOX2.p2	AK298678|TPM3|7170|tropomyosin 3	NM_001043351|TPM3|7170|tropomyosin 3	NM_001043352|TPM3|7170|tropomyosin 3	NM_001043353|TPM3|7170|tropomyosin 3	NM_153649|TPM3|7170|tropomyosin 3
hg19_v1_chrX_-_73834427_73834429	0.00888541	SOX2.p2	
hg19_v1_chr16_-_75528925_75528925	0.00887553	SOX2.p2	AF280086|CHST6|4166|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6	NM_021615|CHST6|4166|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6
hg19_v1_chr9_+_139690789_139690814	0.00885568	SOX2.p2	NM_001039374|KIAA1984|84960|KIAA1984	BC064582|KIAA1984|84960|KIAA1984	BC137317|KIAA1984|84960|KIAA1984	BC137318|KIAA1984|84960|KIAA1984
hg19_v1_chr5_+_173315313_173315443	0.00884006	SOX2.p2	NM_030627|CPEB4|80315|cytoplasmic polyadenylation element binding protein 4
hg19_v1_chr19_+_48972464_48972572	0.00882382	SOX2.p2	NM_004228|CYTH2|9266|cytohesin 2	NM_017457|CYTH2|9266|cytohesin 2
hg19_v1_chr12_-_22089627_22089627	0.00877195	SOX2.p2	NM_005691|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_020297|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9
hg19_v1_chrX_+_133507299_133507455	0.00877137	SOX2.p2	AY157622|PHF6|84295|PHD finger protein 6	NM_001015877|PHF6|84295|PHD finger protein 6	NM_032335|PHF6|84295|PHD finger protein 6	NM_032458|PHF6|84295|PHD finger protein 6	AL832725|PHF6|84295|PHD finger protein 6	AK290095|PHF6|84295|PHD finger protein 6	AK303369|PHF6|84295|PHD finger protein 6	BC005994|PHF6|84295|PHD finger protein 6	AB058726|PHF6|84295|PHD finger protein 6
hg19_v1_chr5_-_173043590_173043604	0.00876811	SOX2.p2	BC003114|BOD1|91272|biorientation of chromosomes in cell division 1
hg19_v1_chr14_-_35344526_35344549	0.00874741	SOX2.p2	AF161435|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg19_v1_chr3_+_157827937_157827944	0.00873236	SOX2.p2	AK300388|RSRC1|51319|arginine/serine-rich coiled-coil 1
hg19_v1_chr9_-_88969256_88969322	0.00872999	SOX2.p2	BC032456|ZCCHC6|79670|zinc finger, CCHC domain containing 6
hg19_v1_chr14_+_35761604_35761682	0.00869017	SOX2.p2	BC023659|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	BC017882|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	X59417|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	BC002979|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	D28434|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	BC022354|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	AK316223|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	DQ892346|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	DQ895551|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	CR456944|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6
hg19_v1_chr11_+_114271294_114271368	0.00867502	SOX2.p2	AK312619|RBM7|10179|RNA binding motif protein 7	AK002015|RBM7|10179|RNA binding motif protein 7	AB209753|RBM7|10179|RNA binding motif protein 7	AK225667|RBM7|10179|RNA binding motif protein 7
hg19_v1_chr13_+_97794050_97794115	0.00866862	SOX2.p2	CR749802|MBNL2|10150|muscleblind-like 2 (Drosophila)
hg19_v1_chr19_+_41869848_41869870	0.00865537	SOX2.p2	NM_001098825|TMEM91|641649|transmembrane protein 91
hg19_v1_chr22_+_50312333_50312417	0.00865102	SOX2.p2	BC050675|CRELD2|79174|cysteine-rich with EGF-like domains 2	DQ470678|CRELD2|79174|cysteine-rich with EGF-like domains 2	AK225930|CRELD2|79174|cysteine-rich with EGF-like domains 2	AY358355|CRELD2|79174|cysteine-rich with EGF-like domains 2	BC002894|CRELD2|79174|cysteine-rich with EGF-like domains 2	DQ470676|CRELD2|79174|cysteine-rich with EGF-like domains 2	DQ470677|CRELD2|79174|cysteine-rich with EGF-like domains 2	DQ470680|CRELD2|79174|cysteine-rich with EGF-like domains 2	AJ968414|CRELD2|79174|cysteine-rich with EGF-like domains 2
hg19_v1_chr15_-_65360175_65360288	0.00863656	SOX2.p2	AK314914|RASL12|51285|RAS-like, family 12	AK296261|RASL12|51285|RAS-like, family 12	AF233588|RASL12|51285|RAS-like, family 12
hg19_v1_chr13_-_99630243_99630337	0.00861858	SOX2.p2	AB028981|DOCK9|23348|dedicator of cytokinesis 9	CR936820|DOCK9|23348|dedicator of cytokinesis 9	AK126492|DOCK9|23348|dedicator of cytokinesis 9	NM_001130048|DOCK9|23348|dedicator of cytokinesis 9	NM_001130050|DOCK9|23348|dedicator of cytokinesis 9
hg19_v1_chr19_+_2164119_2164157	0.00861843	SOX2.p2	AF509504|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)	NM_032482|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)
hg19_v1_chr3_-_56698073_56698073	0.00861522	SOX2.p2	BC029354|FAM208A|23272|family with sequence similarity 208, member A	NM_015224|FAM208A|23272|family with sequence similarity 208, member A
hg19_v1_chr17_+_73720775_73720783	0.00858417	SOX2.p2	NM_001005619|ITGB4|3691|integrin, beta 4	X52186|ITGB4|3691|integrin, beta 4	AF011375|ITGB4|3691|integrin, beta 4
hg19_v1_chr1_-_150978879_150979384	0.00858288	SOX2.p2	BC032321|FAM63A|55793|family with sequence similarity 63, member A	AK303962|FAM63A|55793|family with sequence similarity 63, member A	AK125493|FAM63A|55793|family with sequence similarity 63, member A	AK002142|FAM63A|55793|family with sequence similarity 63, member A	NM_001163259|FAM63A|55793|family with sequence similarity 63, member A	NM_001163260|FAM63A|55793|family with sequence similarity 63, member A	BC014447|FAM63A|55793|family with sequence similarity 63, member A	NM_001040217|FAM63A|55793|family with sequence similarity 63, member A
hg19_v1_chr8_+_102504661_102504669	0.00856622	SOX2.p2	NM_024915|GRHL2|79977|grainyhead-like 2 (Drosophila)	AK296817|GRHL2|79977|grainyhead-like 2 (Drosophila)	AK310221|GRHL2|79977|grainyhead-like 2 (Drosophila)
hg19_v1_chr1_-_149859465_149859562	0.0085171	SOX2.p2	NM_175065|HIST2H2AB|317772|histone cluster 2, H2ab	AK289725|HIST2H2BE|8349|histone cluster 2, H2be
hg19_v1_chr1_+_35851101_35851133	0.00850893	SOX2.p2	BX648067|ZMYM4|9202|zinc finger, MYM-type 4
hg19_v1_chr1_-_154155664_154155666	0.00847376	SOX2.p2	AK026559|TPM3|7170|tropomyosin 3	AK092712|TPM3|7170|tropomyosin 3
hg19_v1_chr14_-_54955664_54955707	0.00846925	SOX2.p2	M86492|GMFB|2764|glia maturation factor, beta	AB209240|GMFB|2764|glia maturation factor, beta	AK311753|GMFB|2764|glia maturation factor, beta	BC005359|GMFB|2764|glia maturation factor, beta
hg19_v1_chrX_+_109662284_109662284	0.00845717	SOX2.p2	AB037739|RGAG1|57529|retrotransposon gag domain containing 1	AY121804|RGAG1|57529|retrotransposon gag domain containing 1	NM_020769|RGAG1|57529|retrotransposon gag domain containing 1
hg19_v1_chr2_-_37898768_37898790	0.00844053	SOX2.p2	AK128735|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3	BC019270|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3	AK313483|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3
hg19_v1_chr20_-_43150686_43150729	0.00843762	SOX2.p2	AK295120|SERINC3|10955|serine incorporator 3	AK309993|SERINC3|10955|serine incorporator 3	NM_006811|SERINC3|10955|serine incorporator 3	NM_198941|SERINC3|10955|serine incorporator 3
hg19_v1_chr22_-_39052579_39052633	0.00842808	SOX2.p2	NM_001013647|LOC646851|646851|putative uncharacterized protein LOC388900
hg19_v1_chr13_-_21635629_21635702	0.00840989	SOX2.p2	BC127671|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)	AF207547|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)	AB209897|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)	BC071572|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)
hg19_v1_chrX_+_48916515_48916551	0.00840378	SOX2.p2	BC008769|CCDC120|90060|coiled-coil domain containing 120	NM_001163322|CCDC120|90060|coiled-coil domain containing 120	NM_033626|CCDC120|90060|coiled-coil domain containing 120	NM_001163321|CCDC120|90060|coiled-coil domain containing 120	NM_001163323|CCDC120|90060|coiled-coil domain containing 120	AK315837|CCDC120|90060|coiled-coil domain containing 120	AK294024|CCDC120|90060|coiled-coil domain containing 120	AK300366|CCDC120|90060|coiled-coil domain containing 120	AK293898|CCDC120|90060|coiled-coil domain containing 120
hg19_v1_chr1_-_169764030_169764034	0.00837774	SOX2.p2	AL035369|METTL18|92342|methyltransferase like 18	NM_033418|METTL18|92342|methyltransferase like 18	AK313909|METTL18|92342|methyltransferase like 18
hg19_v1_chr17_-_76921205_76921452	0.00835669	SOX2.p2	M32304|TIMP2|7077|TIMP metallopeptidase inhibitor 2	J05593|TIMP2|7077|TIMP metallopeptidase inhibitor 2	S48568|TIMP2|7077|TIMP metallopeptidase inhibitor 2	BC052605|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg19_v1_chr2_+_185463437_185463548	0.00835649	SOX2.p2	BC136602|ZNF804A|91752|zinc finger protein 804A
hg19_v1_chr1_+_154193294_154193454	0.00835145	SOX2.p2	NM_014847|UBAP2L|9898|ubiquitin associated protein 2-like	AK302662|UBAP2L|9898|ubiquitin associated protein 2-like	AK303533|UBAP2L|9898|ubiquitin associated protein 2-like	AJ243668|UBAP2L|9898|ubiquitin associated protein 2-like
hg19_v1_chr4_-_39528921_39529094	0.00834381	SOX2.p2	AF061016|UGDH|7358|UDP-glucose 6-dehydrogenase	AJ007702|UGDH|7358|UDP-glucose 6-dehydrogenase	BC022781|UGDH|7358|UDP-glucose 6-dehydrogenase	AK097930|UGDH|7358|UDP-glucose 6-dehydrogenase	AK297737|UGDH|7358|UDP-glucose 6-dehydrogenase
hg19_v1_chr4_+_77356252_77356252	0.00832363	SOX2.p2	AB055660|SHROOM3|57619|shroom family member 3	NM_020859|SHROOM3|57619|shroom family member 3
hg19_v1_chr6_+_126070895_126070922	0.00830565	SOX2.p2	AF311884|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	BT020067|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	BT020068|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2
hg19_v1_chr12_+_56435685_56435721	0.00829971	SOX2.p2	NM_001029|RPS26|6231|ribosomal protein S26	BC002604|RPS26|6231|ribosomal protein S26
hg19_v1_chr9_-_100684770_100684851	0.00829827	SOX2.p2	DQ892983|C9orf156|51531|chromosome 9 open reading frame 156	DQ896231|C9orf156|51531|chromosome 9 open reading frame 156	AY189280|C9orf156|51531|chromosome 9 open reading frame 156	AF151053|C9orf156|51531|chromosome 9 open reading frame 156	AK309270|C9orf156|51531|chromosome 9 open reading frame 156	BC002863|C9orf156|51531|chromosome 9 open reading frame 156	AK000213|C9orf156|51531|chromosome 9 open reading frame 156	AK302701|C9orf156|51531|chromosome 9 open reading frame 156	NM_016481|C9orf156|51531|chromosome 9 open reading frame 156
hg19_v1_chr5_-_137848517_137848590	0.00829768	SOX2.p2	X80916|ETF1|2107|eukaryotic translation termination factor 1
hg19_v1_chr15_+_72766689_72766744	0.00828477	SOX2.p2	AB209432|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)	BC051877|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)
hg19_v1_chr17_+_76000248_76000317	0.00828034	SOX2.p2	BC039479|TNRC6C|57690|trinucleotide repeat containing 6C	NM_001142640|TNRC6C|57690|trinucleotide repeat containing 6C	NM_018996|TNRC6C|57690|trinucleotide repeat containing 6C
hg19_v1_chr22_-_38713217_38713366	0.00827367	SOX2.p2	BC006490|CSNK1E|1454|casein kinase 1, epsilon	AB091043|CSNK1E|1454|casein kinase 1, epsilon	AK223498|CSNK1E|1454|casein kinase 1, epsilon
hg19_v1_chr3_+_178866124_178866352	0.00826984	SOX2.p2	NM_006218|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide	AK292940|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide
hg19_v1_chr19_+_41699140_41699186	0.0082374	SOX2.p2	AK296087|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1	BC033691|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1	AF335278|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1	DQ893363|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1	DQ896681|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1
hg19_v1_chr9_+_2717525_2717525	0.00819725	SOX2.p2	BC101352|KCNV2|169522|potassium channel, subfamily V, member 2	BC101353|KCNV2|169522|potassium channel, subfamily V, member 2	NM_133497|KCNV2|169522|potassium channel, subfamily V, member 2
hg19_v1_chr8_+_22022677_22022865	0.00813288	SOX2.p2	AB209590|BMP1|649|bone morphogenetic protein 1	BC002593|BMP1|649|bone morphogenetic protein 1	BC009305|BMP1|649|bone morphogenetic protein 1	BC032105|BMP1|649|bone morphogenetic protein 1	BC044626|BMP1|649|bone morphogenetic protein 1	BC142953|BMP1|649|bone morphogenetic protein 1	AK291620|BMP1|649|bone morphogenetic protein 1	BC136679|BMP1|649|bone morphogenetic protein 1	BC144365|BMP1|649|bone morphogenetic protein 1	BC144366|BMP1|649|bone morphogenetic protein 1	BC101763|BMP1|649|bone morphogenetic protein 1	BC101765|BMP1|649|bone morphogenetic protein 1	BC143338|BMP1|649|bone morphogenetic protein 1
hg19_v1_chr12_+_75784849_75784870	0.00812573	SOX2.p2	BC016749|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	AK093175|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2
hg19_v1_chr3_+_102153858_102153876	0.00811461	SOX2.p2	AY090780|ZPLD1|131368|zona pellucida-like domain containing 1	NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1	BC143817|ZPLD1|131368|zona pellucida-like domain containing 1
hg19_v1_chr1_-_154155646_154155657	0.00811081	SOX2.p2	X04588|TPM3|7170|tropomyosin 3	BC072428|TPM3|7170|tropomyosin 3	BC017195|TPM3|7170|tropomyosin 3	AK056921|TPM3|7170|tropomyosin 3
hg19_v1_chr19_-_39303739_39303739	0.00805793	SOX2.p2	NM_006149|LGALS4|3960|lectin, galactoside-binding, soluble, 4
hg19_v1_chrX_+_71401525_71401626	0.00798157	SOX2.p2	NM_001170747|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	NM_006223|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC093700|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC112281|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	HQ258728|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	AB009690|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC005234|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC070288|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC111394|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC104653|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	AK127605|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	AF143096|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)
hg19_v1_chr7_-_102283237_102283315	0.00797358	SOX2.p2	EU341824|UPK3BL|100134938|uroplakin 3B-like	NM_001114403|UPK3BL|100134938|uroplakin 3B-like
hg19_v1_chr2_+_11295602_11295602	0.00795278	SOX2.p2	AK301439|PQLC3|130814|PQ loop repeat containing 3	AK313402|PQLC3|130814|PQ loop repeat containing 3
hg19_v1_chr12_-_45269953_45270001	0.00794726	SOX2.p2	BC020544|NELL2|4753|NEL-like 2 (chicken)
hg19_v1_chr21_+_18885104_18885223	0.00794303	SOX2.p2	NM_001207063|CXADR|1525|coxsackie virus and adenovirus receptor	NM_001207064|CXADR|1525|coxsackie virus and adenovirus receptor	NM_001207065|CXADR|1525|coxsackie virus and adenovirus receptor	NM_001207066|CXADR|1525|coxsackie virus and adenovirus receptor	NM_001338|CXADR|1525|coxsackie virus and adenovirus receptor
hg19_v1_chr9_+_139221931_139222002	0.00792686	SOX2.p2	BC009979|GPSM1|26086|G-protein signaling modulator 1	BC017353|GPSM1|26086|G-protein signaling modulator 1	NM_001145638|GPSM1|26086|G-protein signaling modulator 1	NM_015597|GPSM1|26086|G-protein signaling modulator 1
hg19_v1_chr17_+_15602890_15603036	0.00789342	SOX2.p2	NM_001130842|ZNF286A|57335|zinc finger protein 286A	NM_020652|ZNF286A|57335|zinc finger protein 286A
hg19_v1_chr22_+_32149936_32149960	0.00789061	SOX2.p2	NM_001242897|DEPDC5|9681|DEP domain containing 5
hg19_v1_chr18_-_24128499_24128522	0.00788849	SOX2.p2	NM_001142730|KCTD1|284252|potassium channel tetramerisation domain containing 1
hg19_v1_chr13_-_33002218_33002499	0.00787878	SOX2.p2	BC022188|N4BP2L1|90634|NEDD4 binding protein 2-like 1	AL049785|N4BP2L1|90634|NEDD4 binding protein 2-like 1	AL049786|N4BP2L1|90634|NEDD4 binding protein 2-like 1	AL049787|N4BP2L1|90634|NEDD4 binding protein 2-like 1	U50527|N4BP2L1|90634|NEDD4 binding protein 2-like 1	BC068049|N4BP2L1|90634|NEDD4 binding protein 2-like 1	NM_001079691|N4BP2L1|90634|NEDD4 binding protein 2-like 1	NM_052818|N4BP2L1|90634|NEDD4 binding protein 2-like 1
hg19_v1_chr1_+_112938857_112938880	0.00787592	SOX2.p2	BC016029|CTTNBP2NL|55917|CTTNBP2 N-terminal like	AK022544|CTTNBP2NL|55917|CTTNBP2 N-terminal like	AK092791|LOC100129406|100129406|uncharacterized LOC100129406
hg19_v1_chr1_-_224622000_224622000	0.00785652	SOX2.p2	AB209887|WDR26|80232|WD repeat domain 26	NM_001115113|WDR26|80232|WD repeat domain 26	NM_025160|WDR26|80232|WD repeat domain 26
hg19_v1_chr1_-_145610934_145610937	0.00784518	SOX2.p2	BC004424|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)
hg19_v1_chr1_+_166808680_166808705	0.00783808	SOX2.p2	AK293946|POGK|57645|pogo transposable element with KRAB domain	AK299537|POGK|57645|pogo transposable element with KRAB domain
hg19_v1_chr1_-_173793268_173793326	0.0078309	SOX2.p2	AK055606|CENPL|91687|centromere protein L	BC019022|CENPL|91687|centromere protein L	NM_001171182|CENPL|91687|centromere protein L	BC007071|CENPL|91687|centromere protein L
hg19_v1_chr1_+_200708604_200708738	0.00782302	SOX2.p2	AK095640|CAMSAP2|23271|calmodulin regulated spectrin-associated protein family, member 2	NM_203459|CAMSAP2|23271|calmodulin regulated spectrin-associated protein family, member 2
hg19_v1_chr22_+_39410286_39410366	0.00781627	SOX2.p2	CR456394|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C	AB208979|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C	CU012952|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C	CU013240|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C
hg19_v1_chr1_-_225840660_225840915	0.00778885	SOX2.p2	AF519769|ENAH|55740|enabled homolog (Drosophila)	AY345143|ENAH|55740|enabled homolog (Drosophila)	AK290179|ENAH|55740|enabled homolog (Drosophila)	BC095481|ENAH|55740|enabled homolog (Drosophila)	NM_001008493|ENAH|55740|enabled homolog (Drosophila)	NM_018212|ENAH|55740|enabled homolog (Drosophila)
hg19_v1_chr12_+_112204690_112204694	0.00778654	SOX2.p2	NM_000690|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	NM_001204889|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)
hg19_v1_chr10_-_99161013_99161138	0.00777361	SOX2.p2	AB014590|RRP12|23223|ribosomal RNA processing 12 homolog (S. cerevisiae)	BC012745|RRP12|23223|ribosomal RNA processing 12 homolog (S. cerevisiae)	AK022496|RRP12|23223|ribosomal RNA processing 12 homolog (S. cerevisiae)	NM_001145114|RRP12|23223|ribosomal RNA processing 12 homolog (S. cerevisiae)	NM_015179|RRP12|23223|ribosomal RNA processing 12 homolog (S. cerevisiae)
hg19_v1_chr11_+_82783118_82783119	0.0077554	SOX2.p2	BC031316|LOC100506233|100506233|uncharacterized LOC100506233
hg19_v1_chr12_+_104850986_104851188	0.00774979	SOX2.p2	AF239820|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11	AJ289134|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11	AJ269537|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11
hg19_v1_chr3_+_181429711_181429715	0.00774941	SOX2.p2	NM_003106|SOX2|6657|SRY (sex determining region Y)-box 2
hg19_v1_chr5_+_1801493_1801531	0.00773703	SOX2.p2	NM_004553|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	AK022503|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	BC038664|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	AF044959|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	BC046155|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	CR456880|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	HQ257915|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)
hg19_v1_chr12_-_109027654_109027671	0.00772437	SOX2.p2	AK127638|SELPLG|6404|selectin P ligand	AK098315|SELPLG|6404|selectin P ligand	NM_003006|SELPLG|6404|selectin P ligand
hg19_v1_chr11_+_13690151_13690229	0.00770964	SOX2.p2	NM_032228|FAR1|84188|fatty acyl CoA reductase 1	AY358784|FAR1|84188|fatty acyl CoA reductase 1
hg19_v1_chr12_+_22199219_22199239	0.00767971	SOX2.p2	AF271388|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase	AF397212|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase
hg19_v1_chr7_+_144052432_144052574	0.00766551	SOX2.p2	AK160365|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5	NM_005435|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5	CR749203|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5	BC136661|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5
hg19_v1_chrX_+_17653412_17653412	0.00764789	SOX2.p2	AY456992|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)	NM_001136024|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)
hg19_v1_chr13_+_113656050_113656067	0.00763376	SOX2.p2	BC011853|MCF2L|23263|MCF.2 cell line derived transforming sequence-like	BC020208|MCF2L|23263|MCF.2 cell line derived transforming sequence-like
hg19_v1_chr11_-_66445218_66445305	0.00761305	SOX2.p2	AK095158|RBM4B|83759|RNA binding motif protein 4B	BC004951|RBM4B|83759|RNA binding motif protein 4B	NM_031492|RBM4B|83759|RNA binding motif protein 4B
hg19_v1_chr8_-_10512616_10512665	0.00758687	SOX2.p2	AY168341|RP1L1|94137|retinitis pigmentosa 1-like 1	AY168342|RP1L1|94137|retinitis pigmentosa 1-like 1	AY168343|RP1L1|94137|retinitis pigmentosa 1-like 1	AY168344|RP1L1|94137|retinitis pigmentosa 1-like 1	AY168345|RP1L1|94137|retinitis pigmentosa 1-like 1	AY168346|RP1L1|94137|retinitis pigmentosa 1-like 1	NM_178857|RP1L1|94137|retinitis pigmentosa 1-like 1	AJ491324|RP1L1|94137|retinitis pigmentosa 1-like 1
hg19_v1_chr1_-_223853400_223853435	0.00756636	SOX2.p2	NM_001143962|CAPN8|388743|calpain 8
hg19_v1_chr3_-_114343791_114343798	0.00756348	SOX2.p2	AK315307|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164346|ZBTB20|26137|zinc finger and BTB domain containing 20
hg19_v1_chr15_-_95870310_95870328	0.00755523	SOX2.p2	BC040875|LOC400456|400456|uncharacterized LOC400456
hg19_v1_chr2_-_20550357_20550481	0.00755331	SOX2.p2	AK304198|PUM2|23369|pumilio homolog 2 (Drosophila)	AK093847|PUM2|23369|pumilio homolog 2 (Drosophila)
hg19_v1_chr12_+_11081833_11081912	0.00755207	SOX2.p2	BX641094|PRH2|5555|proline-rich protein HaeIII subfamily 2	NM_005042|PRH2|5555|proline-rich protein HaeIII subfamily 2	BC095488|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX538206|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX538207|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX647155|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX648436|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX648871|PRH2|5555|proline-rich protein HaeIII subfamily 2	NM_001110213|PRH2|5555|proline-rich protein HaeIII subfamily 2	CR749583|PRH2|5555|proline-rich protein HaeIII subfamily 2	K03202|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX647156|PRH2|5555|proline-rich protein HaeIII subfamily 2	BC141916|PRH2|5555|proline-rich protein HaeIII subfamily 2	BC136499|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX648656|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX648901|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX647085|PRH2|5555|proline-rich protein HaeIII subfamily 2
hg19_v1_chr2_+_228356287_228356295	0.00754613	SOX2.p2	AK295030|AGFG1|3267|ArfGAP with FG repeats 1
hg19_v1_chr8_+_23104120_23104150	0.0075392	SOX2.p2	AK315664|CHMP7|91782|charged multivesicular body protein 7	AK021776|CHMP7|91782|charged multivesicular body protein 7
hg19_v1_chr8_+_145064167_145064229	0.00753581	SOX2.p2	NM_000837|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)	NM_001009184|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
hg19_v1_chr3_+_183415540_183415704	0.00753125	SOX2.p2	AB033023|YEATS2|55689|YEATS domain containing 2	BC150273|YEATS2|55689|YEATS domain containing 2	NM_018023|YEATS2|55689|YEATS domain containing 2
hg19_v1_chr17_-_39942937_39943029	0.00752308	SOX2.p2	AK226051|JUP|3728|junction plakoglobin	M23410|JUP|3728|junction plakoglobin	Z68228|JUP|3728|junction plakoglobin	BC000441|JUP|3728|junction plakoglobin	NM_002230|JUP|3728|junction plakoglobin	NM_021991|JUP|3728|junction plakoglobin
hg19_v1_chr14_+_52327384_52327400	0.00751846	SOX2.p2	AL832878|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2
hg19_v1_chr6_+_127664496_127664627	0.00751304	SOX2.p2	
hg19_v1_chr6_-_32119717_32119723	0.00750717	SOX2.p2	AK054885|PRRT1|80863|proline-rich transmembrane protein 1	NM_030651|PRRT1|80863|proline-rich transmembrane protein 1
hg19_v1_chr1_-_154155594_154155633	0.00746269	SOX2.p2	AF474157|TPM3|7170|tropomyosin 3	AY004867|TPM3|7170|tropomyosin 3	AK125367|TPM3|7170|tropomyosin 3
hg19_v1_chr10_-_124605690_124605690	0.00744892	SOX2.p2	AY260047|CUZD1|50624|CUB and zona pellucida-like domains 1	AY260048|CUZD1|50624|CUB and zona pellucida-like domains 1	AY260049|CUZD1|50624|CUB and zona pellucida-like domains 1	AY260050|CUZD1|50624|CUB and zona pellucida-like domains 1	NM_022034|CUZD1|50624|CUB and zona pellucida-like domains 1
hg19_v1_chr17_+_42785975_42786050	0.0074428	SOX2.p2	BC016158|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	NM_025104|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	NM_145663|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	AK303282|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	AK023149|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	AF448801|DBF4B|80174|DBF4 homolog B (S. cerevisiae)
hg19_v1_chr19_+_41082786_41082791	0.00741705	SOX2.p2	BC022855|SHKBP1|92799|SH3KBP1 binding protein 1
hg19_v1_chr19_+_41082729_41082770	0.00741336	SOX2.p2	NM_138392|SHKBP1|92799|SH3KBP1 binding protein 1	AF258553|SHKBP1|92799|SH3KBP1 binding protein 1	AK075057|SHKBP1|92799|SH3KBP1 binding protein 1	AK300819|SHKBP1|92799|SH3KBP1 binding protein 1
hg19_v1_chr5_+_125936606_125936659	0.00741144	SOX2.p2	AK023255|PHAX|51808|phosphorylated adaptor for RNA export	NM_032177|PHAX|51808|phosphorylated adaptor for RNA export	BC021161|PHAX|51808|phosphorylated adaptor for RNA export	AK024065|PHAX|51808|phosphorylated adaptor for RNA export	AK298497|PHAX|51808|phosphorylated adaptor for RNA export	AK225464|PHAX|51808|phosphorylated adaptor for RNA export	CR457305|PHAX|51808|phosphorylated adaptor for RNA export	DQ893213|PHAX|51808|phosphorylated adaptor for RNA export	DQ896542|PHAX|51808|phosphorylated adaptor for RNA export
hg19_v1_chr7_+_44788175_44788190	0.00740957	SOX2.p2	BC110435|ZMIZ2|83637|zinc finger, MIZ-type containing 2
hg19_v1_chr15_+_75491232_75491261	0.00738941	SOX2.p2	AK128205|C15orf39|56905|chromosome 15 open reading frame 39
hg19_v1_chr21_+_17102286_17102364	0.0073851	SOX2.p2	AF170562|USP25|29761|ubiquitin specific peptidase 25	BC075792|USP25|29761|ubiquitin specific peptidase 25
hg19_v1_chr7_+_139025896_139025896	0.0073729	SOX2.p2	NM_197964|C7orf55|154791|chromosome 7 open reading frame 55
hg19_v1_chr10_-_64576074_64576121	0.00734812	SOX2.p2	AK091399|EGR2|1959|early growth response 2	BC035625|EGR2|1959|early growth response 2	CR749641|EGR2|1959|early growth response 2
hg19_v1_chr15_+_74907334_74907334	0.00733949	SOX2.p2	AK091692|CLK3|1198|CDC-like kinase 3	NM_001130028|CLK3|1198|CDC-like kinase 3
hg19_v1_chr6_-_31628509_31628566	0.00732928	SOX2.p2	AJ245433|C6orf47|57827|chromosome 6 open reading frame 47	BC063584|C6orf47|57827|chromosome 6 open reading frame 47	BC012950|C6orf47|57827|chromosome 6 open reading frame 47	NM_021184|C6orf47|57827|chromosome 6 open reading frame 47
hg19_v1_chr19_+_3572903_3572949	0.00731792	SOX2.p2	NM_006339|HMG20B|10362|high mobility group 20B
hg19_v1_chr6_-_167040506_167040649	0.007315	SOX2.p2	DQ891864|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	DQ895053|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	L07598|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg19_v1_chr22_+_32149962_32149964	0.00731085	SOX2.p2	AK294987|DEPDC5|9681|DEP domain containing 5
hg19_v1_chr17_-_42264023_42264073	0.0073038	SOX2.p2	AK055685|C17orf65|339201|chromosome 17 open reading frame 65
hg19_v1_chr14_+_81421708_81422024	0.00729852	SOX2.p2	BC024205|TSHR|7253|thyroid stimulating hormone receptor	NM_000369|TSHR|7253|thyroid stimulating hormone receptor	NM_001018036|TSHR|7253|thyroid stimulating hormone receptor	NM_001142626|TSHR|7253|thyroid stimulating hormone receptor	M31774|TSHR|7253|thyroid stimulating hormone receptor	BC108653|TSHR|7253|thyroid stimulating hormone receptor	BC009237|TSHR|7253|thyroid stimulating hormone receptor	M73747|TSHR|7253|thyroid stimulating hormone receptor	M32215|TSHR|7253|thyroid stimulating hormone receptor	BC063613|TSHR|7253|thyroid stimulating hormone receptor	AB209207|TSHR|7253|thyroid stimulating hormone receptor	BC120972|TSHR|7253|thyroid stimulating hormone receptor	BC120973|TSHR|7253|thyroid stimulating hormone receptor	BC127628|TSHR|7253|thyroid stimulating hormone receptor	BC127629|TSHR|7253|thyroid stimulating hormone receptor	BC141970|TSHR|7253|thyroid stimulating hormone receptor	S49816|TSHR|7253|thyroid stimulating hormone receptor	AY429111|TSHR|7253|thyroid stimulating hormone receptor	S45272|TSHR|7253|thyroid stimulating hormone receptor
hg19_v1_chr12_-_112630525_112630531	0.00729655	SOX2.p2	AF174498|C12orf51|283450|chromosome 12 open reading frame 51
hg19_v1_chr20_+_62152101_62152166	0.00729229	SOX2.p2	BC002531|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)	NM_024299|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)	AK024699|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)
hg19_v1_chr22_+_19419341_19419424	0.00727938	SOX2.p2	AK123768|MRPL40|64976|mitochondrial ribosomal protein L40
hg19_v1_chr19_+_41082792_41082792	0.00727632	SOX2.p2	AK312748|SHKBP1|92799|SH3KBP1 binding protein 1
hg19_v1_chr18_+_33552587_33552747	0.00726809	SOX2.p2	NM_001201474|C18orf21|83608|chromosome 18 open reading frame 21	NM_001201475|C18orf21|83608|chromosome 18 open reading frame 21	NM_001201476|C18orf21|83608|chromosome 18 open reading frame 21	NM_031446|C18orf21|83608|chromosome 18 open reading frame 21	BC108730|C18orf21|83608|chromosome 18 open reading frame 21	BC119765|C18orf21|83608|chromosome 18 open reading frame 21	BC119766|C18orf21|83608|chromosome 18 open reading frame 21	AF277182|C18orf21|83608|chromosome 18 open reading frame 21	AF277189|C18orf21|83608|chromosome 18 open reading frame 21	BC025950|C18orf21|83608|chromosome 18 open reading frame 21
hg19_v1_chr7_-_37393271_37393271	0.00726622	SOX2.p2	AK291784|ELMO1|9844|engulfment and cell motility 1	NM_001206482|ELMO1|9844|engulfment and cell motility 1
hg19_v1_chr17_+_41323181_41323264	0.00724718	SOX2.p2	AK299328|NBR1|4077|neighbor of BRCA1 gene 1	AK290005|NBR1|4077|neighbor of BRCA1 gene 1	AK297425|NBR1|4077|neighbor of BRCA1 gene 1	X76952|NBR1|4077|neighbor of BRCA1 gene 1	NM_005899|NBR1|4077|neighbor of BRCA1 gene 1	BC009808|NBR1|4077|neighbor of BRCA1 gene 1	AY450308|NBR1|4077|neighbor of BRCA1 gene 1
hg19_v1_chr12_+_72057990_72058289	0.00724246	SOX2.p2	AK313452|THAP2|83591|THAP domain containing, apoptosis associated protein 2	AM393083|THAP2|83591|THAP domain containing, apoptosis associated protein 2	CR533485|THAP2|83591|THAP domain containing, apoptosis associated protein 2
hg19_v1_chr7_-_37488554_37488556	0.00724075	SOX2.p2	NM_014800|ELMO1|9844|engulfment and cell motility 1
hg19_v1_chr12_-_6772252_6772360	0.00723767	SOX2.p2	BC013038|ING4|51147|inhibitor of growth family, member 4	AB197695|ING4|51147|inhibitor of growth family, member 4	AB197696|ING4|51147|inhibitor of growth family, member 4	AB197697|ING4|51147|inhibitor of growth family, member 4	EF152349|ING4|51147|inhibitor of growth family, member 4	EF152350|ING4|51147|inhibitor of growth family, member 4	EF152351|ING4|51147|inhibitor of growth family, member 4	EF152352|ING4|51147|inhibitor of growth family, member 4	BC007781|ING4|51147|inhibitor of growth family, member 4	BC095434|ING4|51147|inhibitor of growth family, member 4	AK313621|ING4|51147|inhibitor of growth family, member 4	AF110645|ING4|51147|inhibitor of growth family, member 4	AF156552|ING4|51147|inhibitor of growth family, member 4	AF063594|ING4|51147|inhibitor of growth family, member 4	AK293169|ING4|51147|inhibitor of growth family, member 4	AK303354|ING4|51147|inhibitor of growth family, member 4	NM_001127582|ING4|51147|inhibitor of growth family, member 4	NM_001127583|ING4|51147|inhibitor of growth family, member 4	NM_001127584|ING4|51147|inhibitor of growth family, member 4	NM_001127585|ING4|51147|inhibitor of growth family, member 4	NM_001127586|ING4|51147|inhibitor of growth family, member 4	NM_016162|ING4|51147|inhibitor of growth family, member 4
hg19_v1_chr11_+_7041699_7041699	0.00722973	SOX2.p2	AK310900|NLRP14|338323|NLR family, pyrin domain containing 14	NM_176822|NLRP14|338323|NLR family, pyrin domain containing 14
hg19_v1_chr2_+_46926323_46926479	0.00722247	SOX2.p2	BC032862|SOCS5|9655|suppressor of cytokine signaling 5	AF073958|SOCS5|9655|suppressor of cytokine signaling 5	NM_144949|SOCS5|9655|suppressor of cytokine signaling 5
hg19_v1_chr6_+_31515391_31515471	0.00722089	SOX2.p2	X77909|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	BC105064|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	BC105068|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	BC143671|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AK313888|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF097419|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF097420|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF097421|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF097422|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF097423|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF097424|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF097425|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF097426|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF097427|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF097428|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	AF097429|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	EU446511|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1
hg19_v1_chr1_-_212588235_212588236	0.00721729	SOX2.p2	AK001736|TMEM206|55248|transmembrane protein 206
hg19_v1_chr15_-_41364176_41364232	0.00721355	SOX2.p2	AK057582|INO80|54617|INO80 homolog (S. cerevisiae)
hg19_v1_chr1_+_2036154_2036154	0.00719168	SOX2.p2	NM_001033582|PRKCZ|5590|protein kinase C, zeta
hg19_v1_chr19_+_11071713_11071718	0.00715707	SOX2.p2	BC007302|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg19_v1_chr17_-_79829174_79829235	0.00709804	SOX2.p2	BC016185|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC024258|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC075827|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	X69550|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC027730|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC028333|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC013846|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC009759|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	AK312347|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	AK293147|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg19_v1_chr2_+_181845088_181845363	0.00709609	SOX2.p2	NM_182678|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3	NM_006357|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3
hg19_v1_chr22_-_20104745_20104792	0.0070949	SOX2.p2	AK304068|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK057029|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	NM_022727|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	NM_182984|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)
hg19_v1_chr11_+_63137260_63137528	0.00707509	SOX2.p2	AK074246|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	BC022379|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	NM_080866|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	AB074812|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	AF440402|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	BC126288|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	AB062418|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	AJ295270|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	HQ258285|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9
hg19_v1_chr7_-_140179133_140179191	0.00707469	SOX2.p2	AB209298|MKRN1|23608|makorin ring finger protein 1	DQ892404|MKRN1|23608|makorin ring finger protein 1	EU176516|MKRN1|23608|makorin ring finger protein 1	BC064838|MKRN1|23608|makorin ring finger protein 1	AM236048|MKRN1|23608|makorin ring finger protein 1	BC037400|MKRN1|23608|makorin ring finger protein 1	BC051821|MKRN1|23608|makorin ring finger protein 1	BC012398|MKRN1|23608|makorin ring finger protein 1	AK297361|MKRN1|23608|makorin ring finger protein 1	AK315552|MKRN1|23608|makorin ring finger protein 1
hg19_v1_chr6_+_126240369_126240477	0.00706874	SOX2.p2	NM_001199622|NCOA7|135112|nuclear receptor coactivator 7	AK094706|NCOA7|135112|nuclear receptor coactivator 7
hg19_v1_chr19_-_20748540_20748630	0.00705026	SOX2.p2	BC015765|ZNF737|100129842|zinc finger protein 737	NM_001159293|ZNF737|100129842|zinc finger protein 737
hg19_v1_chr12_-_56753916_56754036	0.00702477	SOX2.p2	AK316516|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	AK295052|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	AK295114|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	NM_005419|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	NM_198332|STAT2|6773|signal transducer and activator of transcription 2, 113kDa
hg19_v1_chr16_+_75033238_75033282	0.00702038	SOX2.p2	AK294434|ZNRF1|84937|zinc and ring finger 1	BC007235|ZNRF1|84937|zinc and ring finger 1	AF378524|ZNRF1|84937|zinc and ring finger 1	AL136903|ZNRF1|84937|zinc and ring finger 1
hg19_v1_chr1_-_154155636_154155636	0.00701425	SOX2.p2	BC000771|TPM3|7170|tropomyosin 3
hg19_v1_chr17_+_26699093_26699125	0.00700978	SOX2.p2	BC040429|SARM1|23098|sterile alpha and TIR motif containing 1	AJ290445|SARM1|23098|sterile alpha and TIR motif containing 1	BC122860|SARM1|23098|sterile alpha and TIR motif containing 1
hg19_v1_chr13_-_26795821_26795893	0.00699989	SOX2.p2	AY009109|RNF6|6049|ring finger protein (C3H2C3 type) 6	NM_183044|RNF6|6049|ring finger protein (C3H2C3 type) 6
hg19_v1_chr10_+_89117424_89117476	0.00699362	SOX2.p2	BC092519|FAM22A|728118|family with sequence similarity 22, member A	NM_001009610|FAM22D|728130|family with sequence similarity 22, member D
hg19_v1_chr7_+_27779810_27779828	0.00697361	SOX2.p2	U33821|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	BC050358|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1
hg19_v1_chr4_+_72204769_72204965	0.0069656	SOX2.p2	BC030977|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	NM_003759|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF007216|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AK308038|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4
hg19_v1_chr3_+_138067969_138067969	0.00695281	SOX2.p2	NM_001252090|MRAS|22808|muscle RAS oncogene homolog
hg19_v1_chr5_-_32388687_32388762	0.00695207	SOX2.p2	AK025481|ZFR|51663|zinc finger RNA binding protein
hg19_v1_chr19_-_47164289_47164452	0.00694725	SOX2.p2	BC034052|DACT3|147906|dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)	NM_145056|DACT3|147906|dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)
hg19_v1_chr5_-_142077508_142077634	0.00693458	SOX2.p2	M60515|FGF1|2246|fibroblast growth factor 1 (acidic)	AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)	DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)
hg19_v1_chr14_-_58618807_58618906	0.00693192	SOX2.p2	BC146861|C14orf37|145407|chromosome 14 open reading frame 37	BX161411|C14orf37|145407|chromosome 14 open reading frame 37	NM_001001872|C14orf37|145407|chromosome 14 open reading frame 37	AK292605|C14orf37|145407|chromosome 14 open reading frame 37	BX161448|C14orf37|145407|chromosome 14 open reading frame 37
hg19_v1_chrX_-_133931146_133931261	0.00690661	SOX2.p2	BC019221|FAM122B|159090|family with sequence similarity 122B	NM_001166599|FAM122B|159090|family with sequence similarity 122B	AK124650|FAM122B|159090|family with sequence similarity 122B	AK297720|FAM122B|159090|family with sequence similarity 122B	NM_001166600|FAM122B|159090|family with sequence similarity 122B	NM_001170757|FAM122B|159090|family with sequence similarity 122B
hg19_v1_chr16_-_48644087_48644145	0.00689839	SOX2.p2	BC051897|N4BP1|9683|NEDD4 binding protein 1	AB014515|N4BP1|9683|NEDD4 binding protein 1	BC152472|N4BP1|9683|NEDD4 binding protein 1	NM_153029|N4BP1|9683|NEDD4 binding protein 1
hg19_v1_chr6_+_25279765_25280023	0.00689836	SOX2.p2	BC140770|LRRC16A|55604|leucine rich repeat containing 16A	FJ009082|LRRC16A|55604|leucine rich repeat containing 16A
hg19_v1_chr17_+_42786188_42786287	0.00688037	SOX2.p2	AK295296|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	BC026999|DBF4B|80174|DBF4 homolog B (S. cerevisiae)
hg19_v1_chr10_-_74114655_74114701	0.00687308	SOX2.p2	BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12	AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12	AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12
hg19_v1_chr17_-_79828691_79828789	0.00686928	SOX2.p2	NM_001185077|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg19_v1_chr1_-_31538486_31538549	0.0068594	SOX2.p2	BC013398|PUM1|9698|pumilio homolog 1 (Drosophila)	D43951|PUM1|9698|pumilio homolog 1 (Drosophila)	AK291779|PUM1|9698|pumilio homolog 1 (Drosophila)	AK300457|PUM1|9698|pumilio homolog 1 (Drosophila)	AF315592|PUM1|9698|pumilio homolog 1 (Drosophila)	AK096476|PUM1|9698|pumilio homolog 1 (Drosophila)	AK222605|PUM1|9698|pumilio homolog 1 (Drosophila)
hg19_v1_chr2_+_113993082_113993458	0.00685837	SOX2.p2	AK056052|LOC654433|654433|uncharacterized LOC654433	AK307781|LOC654433|654433|uncharacterized LOC654433	BX537688|LOC654433|654433|uncharacterized LOC654433	AK056355|LOC654433|654433|uncharacterized LOC654433	AK130275|LOC654433|654433|uncharacterized LOC654433
hg19_v1_chr10_-_79397470_79397502	0.00684787	SOX2.p2	U13913|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	BC137115|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	BC137137|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	BC144496|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1
hg19_v1_chr16_-_57481270_57481439	0.00684356	SOX2.p2	AK074263|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC002568|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AK292281|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AL136613|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC071740|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC024196|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AF248964|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	NM_020313|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC067303|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1
hg19_v1_chr1_+_45266048_45266216	0.00683897	SOX2.p2	AB209875|PLK3|1263|polo-like kinase 3	EU832631|PLK3|1263|polo-like kinase 3	EU832706|PLK3|1263|polo-like kinase 3	BC004135|PLK3|1263|polo-like kinase 3	BC004198|PLK3|1263|polo-like kinase 3	BC013960|PLK3|1263|polo-like kinase 3	U56998|PLK3|1263|polo-like kinase 3
hg19_v1_chr1_-_25291474_25291611	0.0068375	SOX2.p2	BC013362|RUNX3|864|runt-related transcription factor 3	AK310945|RUNX3|864|runt-related transcription factor 3	NM_001031680|RUNX3|864|runt-related transcription factor 3	AF022726|RUNX3|864|runt-related transcription factor 3
hg19_v1_chr20_+_30102261_30102302	0.00683596	SOX2.p2	AF172086|HM13|81502|histocompatibility (minor) 13	BC062595|HM13|81502|histocompatibility (minor) 13	AF483215|HM13|81502|histocompatibility (minor) 13	AJ345029|HM13|81502|histocompatibility (minor) 13	AK074686|HM13|81502|histocompatibility (minor) 13
hg19_v1_chr19_-_14629235_14629346	0.00681405	SOX2.p2	
hg19_v1_chr1_+_185126191_185126350	0.00679941	SOX2.p2	NM_001105518|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)	AK127980|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)	BC030781|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)	NM_017673|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)	AK315802|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)
hg19_v1_chr11_-_63684315_63684315	0.00677846	SOX2.p2	BC023587|RCOR2|283248|REST corepressor 2	NM_173587|RCOR2|283248|REST corepressor 2
hg19_v1_chr21_-_40720842_40720937	0.00677323	SOX2.p2	BT007337|HMGN1|3150|high mobility group nucleosome binding domain 1	DQ891741|HMGN1|3150|high mobility group nucleosome binding domain 1	DQ894919|HMGN1|3150|high mobility group nucleosome binding domain 1
hg19_v1_chr12_-_102872329_102872428	0.00677038	SOX2.p2	M37484|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111284|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg19_v1_chr3_+_58223228_58223338	0.00674959	SOX2.p2	NM_020676|ABHD6|57406|abhydrolase domain containing 6	AK225942|ABHD6|57406|abhydrolase domain containing 6	AK172797|ABHD6|57406|abhydrolase domain containing 6	AK313168|ABHD6|57406|abhydrolase domain containing 6
hg19_v1_chr19_+_3572950_3572957	0.00674739	SOX2.p2	BC002552|HMG20B|10362|high mobility group 20B	AK289500|HMG20B|10362|high mobility group 20B	BC003505|HMG20B|10362|high mobility group 20B
hg19_v1_chr2_+_10183630_10183955	0.00674195	SOX2.p2	BC063286|KLF11|8462|Kruppel-like factor 11	NM_003597|KLF11|8462|Kruppel-like factor 11	AK315345|KLF11|8462|Kruppel-like factor 11	AF272830|KLF11|8462|Kruppel-like factor 11	AK289816|KLF11|8462|Kruppel-like factor 11	BC069383|KLF11|8462|Kruppel-like factor 11	BC074922|KLF11|8462|Kruppel-like factor 11	AF028008|KLF11|8462|Kruppel-like factor 11	AJ275989|KLF11|8462|Kruppel-like factor 11	AK316439|KLF11|8462|Kruppel-like factor 11	NM_001177716|KLF11|8462|Kruppel-like factor 11
hg19_v1_chr1_+_43148187_43148234	0.00673983	SOX2.p2	DQ891609|YBX1|4904|Y box binding protein 1	DQ894802|YBX1|4904|Y box binding protein 1
hg19_v1_chr2_+_234600320_234600347	0.00673181	SOX2.p2	NM_205862|UGT1A6|54578|UDP glucuronosyltransferase 1 family, polypeptide A6
hg19_v1_chr1_+_1361507_1361525	0.00671567	SOX2.p2	NM_001146685|TMEM88B|643965|transmembrane protein 88B
hg19_v1_chr7_-_45151272_45151295	0.00671458	SOX2.p2	BC017235|TBRG4|9238|transforming growth factor beta regulator 4	BC014918|TBRG4|9238|transforming growth factor beta regulator 4	AK022575|TBRG4|9238|transforming growth factor beta regulator 4	AK222943|TBRG4|9238|transforming growth factor beta regulator 4
hg19_v1_chr3_+_115342302_115342536	0.00671093	SOX2.p2	AK289699|GAP43|2596|growth associated protein 43	M25667|GAP43|2596|growth associated protein 43	AK313658|GAP43|2596|growth associated protein 43	BX648458|GAP43|2596|growth associated protein 43	AK290100|GAP43|2596|growth associated protein 43	BC007936|GAP43|2596|growth associated protein 43	AM392759|GAP43|2596|growth associated protein 43	AM393509|GAP43|2596|growth associated protein 43	DQ893244|GAP43|2596|growth associated protein 43	DQ896574|GAP43|2596|growth associated protein 43	BT019771|GAP43|2596|growth associated protein 43	BT019810|GAP43|2596|growth associated protein 43
hg19_v1_chr1_-_241799101_241799231	0.00670867	SOX2.p2	BC117360|CHML|1122|choroideremia-like (Rab escort protein 2)	NM_001821|CHML|1122|choroideremia-like (Rab escort protein 2)	X64728|CHML|1122|choroideremia-like (Rab escort protein 2)
hg19_v1_chr16_-_4588738_4588846	0.00667913	SOX2.p2	BC002882|C16orf5|29965|chromosome 16 open reading frame 5	AK292036|C16orf5|29965|chromosome 16 open reading frame 5	AK302297|C16orf5|29965|chromosome 16 open reading frame 5	AL136698|C16orf5|29965|chromosome 16 open reading frame 5	AK294257|C16orf5|29965|chromosome 16 open reading frame 5	DQ167023|C16orf5|29965|chromosome 16 open reading frame 5	NM_001199055|C16orf5|29965|chromosome 16 open reading frame 5	NM_001199056|C16orf5|29965|chromosome 16 open reading frame 5	NM_013399|C16orf5|29965|chromosome 16 open reading frame 5	AK307067|C16orf5|29965|chromosome 16 open reading frame 5	AK308532|C16orf5|29965|chromosome 16 open reading frame 5
hg19_v1_chr13_-_51417831_51418074	0.00667643	SOX2.p2	AY357595|DLEU7|220107|deleted in lymphocytic leukemia, 7	BC104892|DLEU7|220107|deleted in lymphocytic leukemia, 7	BC112009|DLEU7|220107|deleted in lymphocytic leukemia, 7	NM_198989|DLEU7|220107|deleted in lymphocytic leukemia, 7	AK126830|DLEU7|220107|deleted in lymphocytic leukemia, 7
hg19_v1_chr3_-_165555167_165555220	0.00667606	SOX2.p2	M16474|BCHE|590|butyrylcholinesterase	BC018141|BCHE|590|butyrylcholinesterase	BC008396|BCHE|590|butyrylcholinesterase	AK292063|BCHE|590|butyrylcholinesterase	M16541|BCHE|590|butyrylcholinesterase
hg19_v1_chr17_-_79829272_79829284	0.0066668	SOX2.p2	NM_001185078|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	NM_004309|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg19_v1_chr1_+_87170222_87170280	0.00662078	SOX2.p2	NM_001206651|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	NM_001206652|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	NM_001206653|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	NM_016009|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1
hg19_v1_chr3_-_186857188_186857324	0.0065916	SOX2.p2	L05096|RPL39L|116832|ribosomal protein L39-like	AB063610|RPL39L|116832|ribosomal protein L39-like	BC012328|RPL39L|116832|ribosomal protein L39-like	NM_052969|RPL39L|116832|ribosomal protein L39-like
hg19_v1_chr6_-_30585024_30585083	0.00656049	SOX2.p2	BC150310|PPP1R10|5514|protein phosphatase 1, regulatory subunit 10
hg19_v1_chrX_+_30261847_30261847	0.00654188	SOX2.p2	AK314977|MAGEB1|4112|melanoma antigen family B, 1	NM_002363|MAGEB1|4112|melanoma antigen family B, 1	NM_177415|MAGEB1|4112|melanoma antigen family B, 1	X82539|MAGEB1|4112|melanoma antigen family B, 1
hg19_v1_chr2_+_27440307_27440339	0.00654137	SOX2.p2	
hg19_v1_chr14_-_105444693_105444723	0.00653061	SOX2.p2	NM_138420|AHNAK2|113146|AHNAK nucleoprotein 2
hg19_v1_chr12_+_6898705_6898790	0.0065303	SOX2.p2	AK300052|CD4|920|CD4 molecule	AK308344|CD4|920|CD4 molecule	BC025782|CD4|920|CD4 molecule
hg19_v1_chr19_-_913224_913224	0.00652016	SOX2.p2	NM_138774|R3HDM4|91300|R3H domain containing 4
hg19_v1_chr7_+_80267922_80267965	0.00650803	SOX2.p2	BC008406|CD36|948|CD36 molecule (thrombospondin receptor)
hg19_v1_chr4_+_55095433_55095495	0.00650413	SOX2.p2	AK308353|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	BC015186|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	M21574|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	M30494|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	AK311006|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	AK316578|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	M22734|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	BC063414|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide
hg19_v1_chr11_-_58343308_58343389	0.00650032	SOX2.p2	BC007490|LPXN|9404|leupaxin	BC019035|LPXN|9404|leupaxin	AK313306|LPXN|9404|leupaxin	AK223165|LPXN|9404|leupaxin	AK301093|LPXN|9404|leupaxin	AF062075|LPXN|9404|leupaxin	NM_004811|LPXN|9404|leupaxin
hg19_v1_chr6_-_30640781_30640829	0.0064955	SOX2.p2	AK302721|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	NM_001164239|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	NM_003587|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16
hg19_v1_chr17_+_66031885_66031892	0.00649407	SOX2.p2	BC034443|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
hg19_v1_chr20_+_32077904_32078039	0.00648453	SOX2.p2	NM_001032999|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2	AF052211|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2
hg19_v1_chr20_+_44462395_44462558	0.00647104	SOX2.p2	AK293443|SNX21|90203|sorting nexin family member 21	BC012904|SNX21|90203|sorting nexin family member 21	NM_001042632|SNX21|90203|sorting nexin family member 21	NM_001042633|SNX21|90203|sorting nexin family member 21	NM_033421|SNX21|90203|sorting nexin family member 21	NM_152897|SNX21|90203|sorting nexin family member 21	AF523834|SNX21|90203|sorting nexin family member 21	AL591562|SNX21|90203|sorting nexin family member 21	BC019823|SNX21|90203|sorting nexin family member 21	AF395845|SNX21|90203|sorting nexin family member 21
hg19_v1_chr17_+_7487125_7487139	0.0064406	SOX2.p2	AF059752|MPDU1|9526|mannose-P-dolichol utilization defect 1
hg19_v1_chr11_-_116658701_116658729	0.00643597	SOX2.p2	AK301227|ZNF259|8882|zinc finger protein 259	BT006642|ZNF259|8882|zinc finger protein 259	BC004256|ZNF259|8882|zinc finger protein 259	BC011929|ZNF259|8882|zinc finger protein 259	BC012162|ZNF259|8882|zinc finger protein 259	BC017380|ZNF259|8882|zinc finger protein 259	AF019767|ZNF259|8882|zinc finger protein 259	BC111028|ZNF259|8882|zinc finger protein 259
hg19_v1_chr19_-_913194_913200	0.00643592	SOX2.p2	BC012775|R3HDM4|91300|R3H domain containing 4
hg19_v1_chr2_+_45169036_45169057	0.00643123	SOX2.p2	AJ012611|SIX3|6496|SIX homeobox 3	NM_005413|SIX3|6496|SIX homeobox 3	AL162671|SIX3|6496|SIX homeobox 3
hg19_v1_chr19_-_14629160_14629226	0.00643081	SOX2.p2	CR536485|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	CR541677|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	BC019827|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	BC002352|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	BC013157|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	D49547|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	NM_006145|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	X62421|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1
hg19_v1_chr13_-_26795927_26796027	0.00642927	SOX2.p2	BC034688|RNF6|6049|ring finger protein (C3H2C3 type) 6	AK293272|RNF6|6049|ring finger protein (C3H2C3 type) 6	AJ010347|RNF6|6049|ring finger protein (C3H2C3 type) 6	NM_183043|RNF6|6049|ring finger protein (C3H2C3 type) 6
hg19_v1_chr17_-_73127787_73127928	0.0064287	SOX2.p2	BC002516|NT5C|30833|5', 3'-nucleotidase, cytosolic	BC022334|NT5C|30833|5', 3'-nucleotidase, cytosolic	BC008183|NT5C|30833|5', 3'-nucleotidase, cytosolic	BC047763|NT5C|30833|5', 3'-nucleotidase, cytosolic	BC017454|NT5C|30833|5', 3'-nucleotidase, cytosolic	AF154829|NT5C|30833|5', 3'-nucleotidase, cytosolic	AK000419|NT5C|30833|5', 3'-nucleotidase, cytosolic	NM_001252377|NT5C|30833|5', 3'-nucleotidase, cytosolic	NM_014595|NT5C|30833|5', 3'-nucleotidase, cytosolic
hg19_v1_chr22_+_20105068_20105075	0.006423	SOX2.p2	X83617|RANBP1|5902|RAN binding protein 1
hg19_v1_chr2_-_216245573_216245728	0.00642196	SOX2.p2	U60067|FN1|2335|fibronectin 1	U60068|FN1|2335|fibronectin 1
hg19_v1_chr4_+_30721865_30722133	0.00638942	SOX2.p2	NM_032456|PCDH7|5099|protocadherin 7	AB006755|PCDH7|5099|protocadherin 7	NM_001173523|PCDH7|5099|protocadherin 7	NM_002589|PCDH7|5099|protocadherin 7	NM_032457|PCDH7|5099|protocadherin 7	BC020338|PCDH7|5099|protocadherin 7
hg19_v1_chr19_+_41515495_41515581	0.00637697	SOX2.p2	X06399|CYP2B6|1555|cytochrome P450, family 2, subfamily B, polypeptide 6
hg19_v1_chr7_+_27779809_27779809	0.00637693	SOX2.p2	
hg19_v1_chr5_+_140602914_140603078	0.0063617	SOX2.p2	AK301346|PCDHB14|56122|protocadherin beta 14	AK298296|PCDHB14|56122|protocadherin beta 14	AK074555|PCDHB14|56122|protocadherin beta 14	AF152493|PCDHB14|56122|protocadherin beta 14	AF217744|PCDHB14|56122|protocadherin beta 14	BC099728|PCDHB14|56122|protocadherin beta 14	NM_018934|PCDHB14|56122|protocadherin beta 14	BC098144|PCDHB14|56122|protocadherin beta 14
hg19_v1_chr17_-_48265912_48265926	0.00635589	SOX2.p2	AK297731|COL1A1|1277|collagen, type I, alpha 1
hg19_v1_chr14_-_73925259_73925276	0.00634978	SOX2.p2	BX248781|NUMB|8650|numb homolog (Drosophila)
hg19_v1_chr8_+_136470108_136470294	0.00634361	SOX2.p2	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3	DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3	AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3
hg19_v1_chr15_-_55700456_55700707	0.00633924	SOX2.p2	AK292795|CCPG1|9236|cell cycle progression 1	BC039871|CCPG1|9236|cell cycle progression 1	BC027621|CCPG1|9236|cell cycle progression 1	AB033080|CCPG1|9236|cell cycle progression 1	AK022459|CCPG1|9236|cell cycle progression 1	BC015203|CCPG1|9236|cell cycle progression 1	NM_004748|CCPG1|9236|cell cycle progression 1	NM_001204450|CCPG1|9236|cell cycle progression 1	NM_001204451|CCPG1|9236|cell cycle progression 1	NM_020739|CCPG1|9236|cell cycle progression 1
hg19_v1_chrX_-_63425484_63425669	0.00633087	SOX2.p2	EF186024|FAM123B|139285|family with sequence similarity 123B	AK097146|FAM123B|139285|family with sequence similarity 123B	NM_152424|FAM123B|139285|family with sequence similarity 123B
hg19_v1_chr3_+_19189969_19190040	0.00629827	SOX2.p2	AK295633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	AY053503|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	NM_144633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	AB209053|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	AK309034|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8
hg19_v1_chr16_+_88636810_88636811	0.00628703	SOX2.p2	AK300254|ZC3H18|124245|zinc finger CCCH-type containing 18	AK302716|ZC3H18|124245|zinc finger CCCH-type containing 18
hg19_v1_chr1_+_33004771_33004771	0.00628481	SOX2.p2	NM_001040441|ZBTB8A|653121|zinc finger and BTB domain containing 8A
hg19_v1_chr11_-_47207425_47207431	0.00626774	SOX2.p2	AK300968|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3	AK000577|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3	NM_001184975|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3
hg19_v1_chr6_-_167275997_167276020	0.00626502	SOX2.p2	AK095751|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg19_v1_chr7_-_45151297_45151328	0.00625788	SOX2.p2	AK300489|TBRG4|9238|transforming growth factor beta regulator 4	AL833840|TBRG4|9238|transforming growth factor beta regulator 4	AK001281|TBRG4|9238|transforming growth factor beta regulator 4	AB023165|TBRG4|9238|transforming growth factor beta regulator 4	NM_004749|TBRG4|9238|transforming growth factor beta regulator 4	NM_030900|TBRG4|9238|transforming growth factor beta regulator 4	NM_199122|TBRG4|9238|transforming growth factor beta regulator 4
hg19_v1_chr19_+_9434854_9435016	0.00625357	SOX2.p2	AK027700|ZNF559|84527|zinc finger protein 559	AK308517|ZNF559|84527|zinc finger protein 559	AK309952|ZNF559|84527|zinc finger protein 559	AK310117|ZNF559|84527|zinc finger protein 559	AK092348|ZNF559|84527|zinc finger protein 559	AK056489|ZNF559|84527|zinc finger protein 559	AK310020|ZNF559|84527|zinc finger protein 559	AK310781|ZNF559|84527|zinc finger protein 559	AK298169|ZNF559|84527|zinc finger protein 559	NM_001172650|ZNF559-ZNF177|100529215|ZNF559-ZNF177 readthrough	NM_001202412|ZNF559|84527|zinc finger protein 559	BC006436|ZNF559|84527|zinc finger protein 559	AL389938|ZNF559|84527|zinc finger protein 559	BC034489|ZNF559-ZNF177|100529215|ZNF559-ZNF177 readthrough
hg19_v1_chr8_+_107460151_107460151	0.00625105	SOX2.p2	AK296561|OXR1|55074|oxidation resistance 1	NM_001198532|OXR1|55074|oxidation resistance 1
hg19_v1_chr12_-_121734543_121734708	0.00622595	SOX2.p2	NM_172226|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta
hg19_v1_chr3_-_101039403_101039441	0.00620176	SOX2.p2	AF173155|IMPG2|50939|interphotoreceptor matrix proteoglycan 2	AB593127|IMPG2|50939|interphotoreceptor matrix proteoglycan 2	NM_016247|IMPG2|50939|interphotoreceptor matrix proteoglycan 2
hg19_v1_chr8_-_33424642_33424684	0.00619242	SOX2.p2	AK022588|RNF122|79845|ring finger protein 122	NM_024787|RNF122|79845|ring finger protein 122
hg19_v1_chr6_-_32119667_32119699	0.00617697	SOX2.p2	BC063046|PRRT1|80863|proline-rich transmembrane protein 1	AK123424|PRRT1|80863|proline-rich transmembrane protein 1
hg19_v1_chr22_-_36236330_36236351	0.0061673	SOX2.p2	CR456559|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2
hg19_v1_chr14_+_64971417_64971470	0.00616146	SOX2.p2	AB023214|ZBTB1|22890|zinc finger and BTB domain containing 1
hg19_v1_chr3_-_57199313_57199353	0.00615079	SOX2.p2	AF458067|IL17RD|54756|interleukin 17 receptor D
hg19_v1_chrX_+_46696474_46696534	0.006115	SOX2.p2	AK312555|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)
hg19_v1_chr9_+_130830595_130830643	0.00607982	SOX2.p2	AJ619990|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25
hg19_v1_chr21_+_17102370_17102712	0.00607749	SOX2.p2	NM_013396|USP25|29761|ubiquitin specific peptidase 25	AF134213|USP25|29761|ubiquitin specific peptidase 25	BC015930|USP25|29761|ubiquitin specific peptidase 25	FJ763652|USP25|29761|ubiquitin specific peptidase 25
hg19_v1_chrX_+_142967172_142967172	0.00607346	SOX2.p2	GU727624|UBE2NL|389898|ubiquitin-conjugating enzyme E2N-like	NM_001012989|UBE2NL|389898|ubiquitin-conjugating enzyme E2N-like
hg19_v1_chr5_+_137673702_137673814	0.00606672	SOX2.p2	NM_016605|FAM53C|51307|family with sequence similarity 53, member C
hg19_v1_chr6_+_135502445_135502452	0.00604996	SOX2.p2	AJ606317|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606318|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606319|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606320|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606321|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606322|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606323|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606324|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001130172|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001130173|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161656|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161657|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161658|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161659|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161660|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_005375|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	X52125|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)
hg19_v1_chr9_+_91003987_91004010	0.00604963	SOX2.p2	AK315854|SPIN1|10927|spindlin 1
hg19_v1_chr6_-_30655078_30655100	0.0060404	SOX2.p2	AB075829|PPP1R18|170954|protein phosphatase 1, regulatory subunit 18	NM_001134870|PPP1R18|170954|protein phosphatase 1, regulatory subunit 18	AK125639|PPP1R18|170954|protein phosphatase 1, regulatory subunit 18
hg19_v1_chr19_+_36139124_36139210	0.00600929	SOX2.p2	NM_001863|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)	BC001015|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)
hg19_v1_chr15_-_34635306_34635364	0.00597066	SOX2.p2	BC008886|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)	BC063023|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)	AB043104|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)	NM_018648|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)
hg19_v1_chr1_-_23696267_23696358	0.00596948	SOX2.p2	NM_001077195|ZNF436|80818|zinc finger protein 436
hg19_v1_chr13_-_50018143_50018220	0.00596202	SOX2.p2	AY211923|CAB39L|81617|calcium binding protein 39-like	AY288977|CAB39L|81617|calcium binding protein 39-like	BX647518|CAB39L|81617|calcium binding protein 39-like	NM_001079670|CAB39L|81617|calcium binding protein 39-like
hg19_v1_chr17_-_79829237_79829260	0.005956	SOX2.p2	BC005851|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC005875|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC106044|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	AK300816|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg19_v1_chr6_-_89673270_89673346	0.00595167	SOX2.p2	AB012142|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AB012143|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	BC019954|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AK295719|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AK312407|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AK299777|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase
hg19_v1_chr16_+_31724577_31724626	0.00594532	SOX2.p2	AK128671|ZNF720|124411|zinc finger protein 720	BC018134|ZNF720|124411|zinc finger protein 720
hg19_v1_chr7_+_5632435_5632441	0.0059414	SOX2.p2	NM_003088|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	AK095254|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	AK316607|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)
hg19_v1_chr11_+_126173646_126173646	0.00594042	SOX2.p2	AF532613|DCPS|28960|decapping enzyme, scavenger	NM_014026|DCPS|28960|decapping enzyme, scavenger
hg19_v1_chr8_+_21777216_21777281	0.00593693	SOX2.p2	AK291472|XPO7|23039|exportin 7	AB018288|XPO7|23039|exportin 7	AF064729|XPO7|23039|exportin 7
hg19_v1_chr20_+_47835964_47835984	0.00593345	SOX2.p2	BC009304|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	BC011927|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	BC016060|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	HQ258546|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
hg19_v1_chr1_-_1167358_1167371	0.00592364	SOX2.p2	AK223079|SDF4|51150|stromal cell derived factor 4	AK222521|SDF4|51150|stromal cell derived factor 4	AK315517|SDF4|51150|stromal cell derived factor 4	AF132749|SDF4|51150|stromal cell derived factor 4
hg19_v1_chr17_-_79212884_79212894	0.00592112	SOX2.p2	NM_144679|C17orf56|146705|chromosome 17 open reading frame 56
hg19_v1_chr19_+_50354417_50354643	0.00591881	SOX2.p2	AJ617480|PTOV1|53635|prostate tumor overexpressed 1	BC042921|PTOV1|53635|prostate tumor overexpressed 1	U79287|PTOV1|53635|prostate tumor overexpressed 1
hg19_v1_chr14_-_73925214_73925251	0.00591446	SOX2.p2	BX248775|NUMB|8650|numb homolog (Drosophila)	BX647137|NUMB|8650|numb homolog (Drosophila)	AF171938|NUMB|8650|numb homolog (Drosophila)	AF171939|NUMB|8650|numb homolog (Drosophila)	AF171940|NUMB|8650|numb homolog (Drosophila)	AF171941|NUMB|8650|numb homolog (Drosophila)	BX248073|NUMB|8650|numb homolog (Drosophila)	AF015040|NUMB|8650|numb homolog (Drosophila)	AK315130|NUMB|8650|numb homolog (Drosophila)	BC020788|NUMB|8650|numb homolog (Drosophila)
hg19_v1_chr1_+_53527723_53527759	0.00590267	SOX2.p2	NM_001199080|PODN|127435|podocan	NM_001199082|PODN|127435|podocan	NM_153703|PODN|127435|podocan
hg19_v1_chr5_-_43397212_43397240	0.00590223	SOX2.p2	AK307307|CCL28|56477|chemokine (C-C motif) ligand 28
hg19_v1_chr7_+_91924291_91924419	0.0058942	SOX2.p2	
hg19_v1_chr6_+_21593963_21594781	0.00589209	SOX2.p2	NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4	AF070669|SOX4|6659|SRY (sex determining region Y)-box 4	AF124147|SOX4|6659|SRY (sex determining region Y)-box 4	BC072668|SOX4|6659|SRY (sex determining region Y)-box 4	X70683|SOX4|6659|SRY (sex determining region Y)-box 4	EU446655|SOX4|6659|SRY (sex determining region Y)-box 4
hg19_v1_chr17_-_44270255_44270363	0.00587436	SOX2.p2	BC098376|KIAA1267|284058|KIAA1267	NM_015443|KIAA1267|284058|KIAA1267
hg19_v1_chr3_+_9773439_9773461	0.00587087	SOX2.p2	BC053851|BRPF1|7862|bromodomain and PHD finger containing, 1
hg19_v1_chr10_-_119805673_119806415	0.00584234	SOX2.p2	DQ013303|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	BC075073|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	BC075074|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	AB023158|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	AY037299|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	NM_014904|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)
hg19_v1_chr20_-_23618382_23618616	0.00583656	SOX2.p2	BX647523|CST3|1471|cystatin C	BT006839|CST3|1471|cystatin C	CR541988|CST3|1471|cystatin C	CR542018|CST3|1471|cystatin C	DQ891439|CST3|1471|cystatin C	EU176584|CST3|1471|cystatin C	AB587083|CST3|1471|cystatin C	BC013083|CST3|1471|cystatin C	NM_000099|CST3|1471|cystatin C	X05607|CST3|1471|cystatin C	BC110305|CST3|1471|cystatin C	AK312213|CST3|1471|cystatin C
hg19_v1_chr5_+_95997723_95997779	0.00578962	SOX2.p2	NM_001190442|CAST|831|calpastatin	AB208816|CAST|831|calpastatin
hg19_v1_chr1_+_109419601_109419621	0.00578907	SOX2.p2	AB445462|GPSM2|29899|G-protein signaling modulator 2	NM_013296|GPSM2|29899|G-protein signaling modulator 2	AK314249|GPSM2|29899|G-protein signaling modulator 2
hg19_v1_chr20_+_57556295_57556319	0.00578504	SOX2.p2	AK293410|TH1L|51497|TH1-like (Drosophila)	AK304310|TH1L|51497|TH1-like (Drosophila)	NM_198976|TH1L|51497|TH1-like (Drosophila)
hg19_v1_chr9_-_88969323_88969424	0.00577458	SOX2.p2	AL832193|ZCCHC6|79670|zinc finger, CCHC domain containing 6	CR936608|ZCCHC6|79670|zinc finger, CCHC domain containing 6	AK055546|ZCCHC6|79670|zinc finger, CCHC domain containing 6	CR933644|ZCCHC6|79670|zinc finger, CCHC domain containing 6	AL832026|ZCCHC6|79670|zinc finger, CCHC domain containing 6	BX641077|ZCCHC6|79670|zinc finger, CCHC domain containing 6	CR933643|ZCCHC6|79670|zinc finger, CCHC domain containing 6	BC111003|ZCCHC6|79670|zinc finger, CCHC domain containing 6	NM_001185059|ZCCHC6|79670|zinc finger, CCHC domain containing 6	NM_001185074|ZCCHC6|79670|zinc finger, CCHC domain containing 6	NM_024617|ZCCHC6|79670|zinc finger, CCHC domain containing 6
hg19_v1_chr2_+_191014971_191014971	0.00576394	SOX2.p2	NM_001042520|C2orf88|84281|chromosome 2 open reading frame 88
hg19_v1_chr1_+_53527822_53527900	0.00576327	SOX2.p2	AY358294|PODN|127435|podocan	AK314096|PODN|127435|podocan	AK300847|PODN|127435|podocan	AK296649|PODN|127435|podocan	AK299375|PODN|127435|podocan	AK304599|PODN|127435|podocan	AY313607|PODN|127435|podocan	BC030608|PODN|127435|podocan	NM_001199081|PODN|127435|podocan	BC028292|PODN|127435|podocan
hg19_v1_chr18_-_24722757_24723001	0.00575981	SOX2.p2	AF332472|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9	AK093349|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9	NM_001243848|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9
hg19_v1_chrX_+_152912655_152912826	0.00575116	SOX2.p2	BC060837|DUSP9|1852|dual specificity phosphatase 9
hg19_v1_chr19_-_44123732_44123767	0.0057452	SOX2.p2	BC015950|ZNF428|126299|zinc finger protein 428	AY257197|ZNF428|126299|zinc finger protein 428	BC045799|ZNF428|126299|zinc finger protein 428
hg19_v1_chr1_-_200379072_200379162	0.00574492	SOX2.p2	AK297233|ZNF281|23528|zinc finger protein 281	AK022916|ZNF281|23528|zinc finger protein 281	AK094701|ZNF281|23528|zinc finger protein 281
hg19_v1_chr4_+_88343702_88344056	0.00574324	SOX2.p2	NM_001248011|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	NM_024047|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK027295|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK074845|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	NM_198038|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AF265341|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AF273028|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK075408|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK308028|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	BC000542|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AY359123|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9
hg19_v1_chr7_-_126883568_126883568	0.00572974	SOX2.p2	NM_000845|GRM8|2918|glutamate receptor, metabotropic 8
hg19_v1_chr1_-_76081693_76081799	0.0057293	SOX2.p2	AK299573|SLC44A5|204962|solute carrier family 44, member 5
hg19_v1_chr1_-_41627045_41627103	0.00572491	SOX2.p2	BC009752|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)	NM_001031694|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)
hg19_v1_chr15_-_41694619_41694705	0.00572344	SOX2.p2	AF151823|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1	BC000780|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1	NM_016013|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1	AK310033|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1	AK310983|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1	AK309889|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1
hg19_v1_chr2_+_155555092_155555287	0.00572097	SOX2.p2	NM_002239|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	U50964|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	AK293824|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	BC022495|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	GU068048|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	GU074515|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	DQ892363|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	DQ895572|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3
hg19_v1_chr10_+_101088794_101088855	0.00570513	SOX2.p2	NM_020348|CNNM1|26507|cyclin M1
hg19_v1_chr12_-_109027615_109027651	0.00570301	SOX2.p2	AK290395|SELPLG|6404|selectin P ligand	BC029782|SELPLG|6404|selectin P ligand
hg19_v1_chr12_+_6898605_6898642	0.00569764	SOX2.p2	NM_000616|CD4|920|CD4 molecule	NM_001195014|CD4|920|CD4 molecule	NM_001195015|CD4|920|CD4 molecule	NM_001195016|CD4|920|CD4 molecule	NM_001195017|CD4|920|CD4 molecule
hg19_v1_chr19_-_7990974_7991058	0.005696	SOX2.p2	BC062702|CTXN1|404217|cortexin 1	AK098834|CTXN1|404217|cortexin 1	NM_206833|CTXN1|404217|cortexin 1
hg19_v1_chr2_-_20512016_20512083	0.00567081	SOX2.p2	AF272350|PUM2|23369|pumilio homolog 2 (Drosophila)
hg19_v1_chr7_-_28997907_28997952	0.00565018	SOX2.p2	AB014544|TRIL|9865|TLR4 interactor with leucine-rich repeats	BC036337|TRIL|9865|TLR4 interactor with leucine-rich repeats
hg19_v1_chr2_+_31456879_31456964	0.00564759	SOX2.p2	AK316006|EHD3|30845|EH-domain containing 3	NM_014600|EHD3|30845|EH-domain containing 3
hg19_v1_chr17_-_61819165_61819329	0.00563256	SOX2.p2	AF308302|STRADA|92335|STE20-related kinase adaptor alpha	AK074771|STRADA|92335|STE20-related kinase adaptor alpha	AK293160|STRADA|92335|STE20-related kinase adaptor alpha	AY290821|STRADA|92335|STE20-related kinase adaptor alpha	NM_001003786|STRADA|92335|STE20-related kinase adaptor alpha	NM_001003787|STRADA|92335|STE20-related kinase adaptor alpha	NM_001003788|STRADA|92335|STE20-related kinase adaptor alpha	NM_001165969|STRADA|92335|STE20-related kinase adaptor alpha	NM_001165970|STRADA|92335|STE20-related kinase adaptor alpha	NM_153335|STRADA|92335|STE20-related kinase adaptor alpha
hg19_v1_chr22_+_50312278_50312330	0.00559395	SOX2.p2	DQ470679|CRELD2|79174|cysteine-rich with EGF-like domains 2	NM_001135101|CRELD2|79174|cysteine-rich with EGF-like domains 2	NM_024324|CRELD2|79174|cysteine-rich with EGF-like domains 2	AK308535|CRELD2|79174|cysteine-rich with EGF-like domains 2
hg19_v1_chr14_-_64761077_64761127	0.00559001	SOX2.p2	AF051427|ESR2|2100|estrogen receptor 2 (ER beta)	AF051428|ESR2|2100|estrogen receptor 2 (ER beta)	AF060555|ESR2|2100|estrogen receptor 2 (ER beta)	NM_001040275|ESR2|2100|estrogen receptor 2 (ER beta)	NM_001437|ESR2|2100|estrogen receptor 2 (ER beta)
hg19_v1_chr16_-_30798206_30798588	0.00558146	SOX2.p2	AB002324|ZNF629|23361|zinc finger protein 629	NM_001080417|ZNF629|23361|zinc finger protein 629
hg19_v1_chr16_+_57496569_57496573	0.00558056	SOX2.p2	
hg19_v1_chrX_+_70503041_70503041	0.00557486	SOX2.p2	NM_001145408|NONO|4841|non-POU domain containing, octamer-binding	NM_001145409|NONO|4841|non-POU domain containing, octamer-binding	NM_001145410|NONO|4841|non-POU domain containing, octamer-binding	NM_007363|NONO|4841|non-POU domain containing, octamer-binding
hg19_v1_chr7_-_140179224_140179316	0.00557347	SOX2.p2	AF192784|MKRN1|23608|makorin ring finger protein 1	AL136812|MKRN1|23608|makorin ring finger protein 1	AF117233|MKRN1|23608|makorin ring finger protein 1	BC025955|MKRN1|23608|makorin ring finger protein 1
hg19_v1_chr12_+_53845887_53845902	0.00556681	SOX2.p2	BC071942|PCBP2|5094|poly(rC) binding protein 2
hg19_v1_chr22_+_39052671_39052721	0.00556375	SOX2.p2	AL136686|CBY1|25776|chibby homolog 1 (Drosophila)	AL050345|CBY1|25776|chibby homolog 1 (Drosophila)	BC016139|CBY1|25776|chibby homolog 1 (Drosophila)	AF331041|CBY1|25776|chibby homolog 1 (Drosophila)
hg19_v1_chr22_+_20105076_20105093	0.0055623	SOX2.p2	AK293502|RANBP1|5902|RAN binding protein 1	BC071998|RANBP1|5902|RAN binding protein 1
hg19_v1_chr17_+_74075262_74075348	0.00554171	SOX2.p2	AK122638|ZACN|353174|zinc activated ligand-gated ion channel	NM_180990|ZACN|353174|zinc activated ligand-gated ion channel	AF512521|ZACN|353174|zinc activated ligand-gated ion channel	BC110596|ZACN|353174|zinc activated ligand-gated ion channel	BC110597|ZACN|353174|zinc activated ligand-gated ion channel	AB223030|ZACN|353174|zinc activated ligand-gated ion channel
hg19_v1_chr1_+_29063443_29063632	0.00553902	SOX2.p2	AK303833|YTHDF2|51441|YTH domain family, member 2	NM_001172828|YTHDF2|51441|YTH domain family, member 2	AF432214|YTHDF2|51441|YTH domain family, member 2	AF155095|YTHDF2|51441|YTH domain family, member 2	AF192968|YTHDF2|51441|YTH domain family, member 2	DQ892157|YTHDF2|51441|YTH domain family, member 2	DQ895352|YTHDF2|51441|YTH domain family, member 2	AB451335|YTHDF2|51441|YTH domain family, member 2	AB451484|YTHDF2|51441|YTH domain family, member 2
hg19_v1_chr11_+_94800397_94800420	0.0055262	SOX2.p2	AF031166|SRSF8|10929|serine/arginine-rich splicing factor 8
hg19_v1_chr2_-_172290435_172290618	0.00552491	SOX2.p2	AK124092|METTL8|79828|methyltransferase like 8	BC025250|METTL8|79828|methyltransferase like 8	AK024046|METTL8|79828|methyltransferase like 8
hg19_v1_chr15_-_65282093_65282176	0.00552356	SOX2.p2	AK172849|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	AK225527|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	AK312943|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	BC000244|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg19_v1_chr9_+_137004913_137004996	0.00551733	SOX2.p2	AJ011376|WDR5|11091|WD repeat domain 5	NM_052821|WDR5|11091|WD repeat domain 5
hg19_v1_chr6_+_31515352_31515388	0.00551608	SOX2.p2	AK291893|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	NM_001144961|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	NM_005007|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1
hg19_v1_chr12_-_49245904_49245961	0.00551325	SOX2.p2	AF026402|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	BC002366|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	AK294877|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	AK312379|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	AK128428|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	AK292921|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	NM_004818|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
hg19_v1_chr8_-_12612968_12613041	0.00550941	SOX2.p2	NM_152271|LONRF1|91694|LON peptidase N-terminal domain and ring finger 1
hg19_v1_chr10_+_70748476_70748594	0.00550465	SOX2.p2	NM_015634|KIAA1279|26128|KIAA1279	AB033105|KIAA1279|26128|KIAA1279	BC006427|KIAA1279|26128|KIAA1279	AK291343|KIAA1279|26128|KIAA1279	BC012180|KIAA1279|26128|KIAA1279
hg19_v1_chr6_-_3227776_3227967	0.00550331	SOX2.p2	BT019930|TUBB2B|347733|tubulin, beta 2B class IIb	CR456788|TUBB2B|347733|tubulin, beta 2B class IIb	BC063610|TUBB2B|347733|tubulin, beta 2B class IIb	AK308806|TUBB2B|347733|tubulin, beta 2B class IIb	AK289433|TUBB2B|347733|tubulin, beta 2B class IIb	AK297568|TUBB2B|347733|tubulin, beta 2B class IIb	BC001352|TUBB2B|347733|tubulin, beta 2B class IIb	NM_178012|TUBB2B|347733|tubulin, beta 2B class IIb
hg19_v1_chr6_+_25279651_25279666	0.00550187	SOX2.p2	AK125696|LRRC16A|55604|leucine rich repeat containing 16A	NM_001173977|LRRC16A|55604|leucine rich repeat containing 16A	NM_017640|LRRC16A|55604|leucine rich repeat containing 16A
hg19_v1_chr19_+_52839497_52839610	0.00548735	SOX2.p2	NM_001161425|ZNF610|162963|zinc finger protein 610	NM_001161426|ZNF610|162963|zinc finger protein 610	NM_001161427|ZNF610|162963|zinc finger protein 610	AK290888|ZNF610|162963|zinc finger protein 610	BC039903|ZNF610|162963|zinc finger protein 610	BC105967|ZNF610|162963|zinc finger protein 610
hg19_v1_chr11_-_6633178_6633238	0.00548626	SOX2.p2	AL833496|TAF10|6881|TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa
hg19_v1_chr11_-_82782883_82782912	0.00548217	SOX2.p2	BC014213|RAB30|27314|RAB30, member RAS oncogene family	NM_014488|RAB30|27314|RAB30, member RAS oncogene family	BX641138|RAB30|27314|RAB30, member RAS oncogene family
hg19_v1_chr9_-_99329092_99329202	0.00547499	SOX2.p2	AK126388|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)	NM_001077181|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)
hg19_v1_chr6_+_43597278_43597278	0.00546278	SOX2.p2	NM_001003690|MAD2L1BP|9587|MAD2L1 binding protein
hg19_v1_chr12_-_109027565_109027584	0.0054588	SOX2.p2	AK225644|SELPLG|6404|selectin P ligand	U02297|SELPLG|6404|selectin P ligand	AK295238|SELPLG|6404|selectin P ligand
hg19_v1_chr6_-_89673127_89673255	0.00544172	SOX2.p2	AB009022|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AB009023|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AB009024|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase
hg19_v1_chr6_+_123109970_123109970	0.00541903	SOX2.p2	NM_006714|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A
hg19_v1_chr1_+_24286311_24286382	0.00541765	SOX2.p2	AF151042|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC068475|PNRC2|55629|proline-rich nuclear receptor coactivator 2	AK311305|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC001959|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC085018|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC078177|PNRC2|55629|proline-rich nuclear receptor coactivator 2	AF374386|PNRC2|55629|proline-rich nuclear receptor coactivator 2
hg19_v1_chr16_+_24567628_24567629	0.00540818	SOX2.p2	BC029649|RBBP6|5930|retinoblastoma binding protein 6
hg19_v1_chr22_+_23522911_23523187	0.00540519	SOX2.p2	X06418|BCR|613|breakpoint cluster region	EU216058|BCR|613|breakpoint cluster region	EU216059|BCR|613|breakpoint cluster region	EU216061|BCR|613|breakpoint cluster region	EU216062|BCR|613|breakpoint cluster region	EU216063|BCR|613|breakpoint cluster region	EU216064|BCR|613|breakpoint cluster region	EU216067|BCR|613|breakpoint cluster region	EU216069|BCR|613|breakpoint cluster region	EU216070|BCR|613|breakpoint cluster region
hg19_v1_chr20_+_57556322_57556377	0.00539766	SOX2.p2	BC014952|TH1L|51497|TH1-like (Drosophila)	BX647417|TH1L|51497|TH1-like (Drosophila)	AJ238379|TH1L|51497|TH1-like (Drosophila)	AF161479|TH1L|51497|TH1-like (Drosophila)	AK023927|TH1L|51497|TH1-like (Drosophila)	AK023310|TH1L|51497|TH1-like (Drosophila)	AK001316|TH1L|51497|TH1-like (Drosophila)
hg19_v1_chr3_+_4535030_4535033	0.00536797	SOX2.p2	NM_001099952|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1	NM_001168272|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1	NM_002222|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1	AK311008|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1
hg19_v1_chr12_+_54519836_54519881	0.00536556	SOX2.p2	BC009385|LOC400043|400043|uncharacterized LOC400043
hg19_v1_chr12_-_81331487_81331693	0.00533673	SOX2.p2	CR407680|LIN7A|8825|lin-7 homolog A (C. elegans)	BC099921|LIN7A|8825|lin-7 homolog A (C. elegans)	AK315321|LIN7A|8825|lin-7 homolog A (C. elegans)	BC046926|LIN7A|8825|lin-7 homolog A (C. elegans)	BC062332|LIN7A|8825|lin-7 homolog A (C. elegans)	BC118609|LIN7A|8825|lin-7 homolog A (C. elegans)	BC122561|LIN7A|8825|lin-7 homolog A (C. elegans)	AF087693|LIN7A|8825|lin-7 homolog A (C. elegans)	AF173081|LIN7A|8825|lin-7 homolog A (C. elegans)	NM_004664|LIN7A|8825|lin-7 homolog A (C. elegans)
hg19_v1_chr2_-_136594749_136594749	0.00532756	SOX2.p2	NM_002299|LCT|3938|lactase	X07994|LCT|3938|lactase
hg19_v1_chr5_-_49737216_49737271	0.00531097	SOX2.p2	NM_198449|EMB|133418|embigin
hg19_v1_chr19_+_9938555_9938580	0.00530802	SOX2.p2	NM_001048241|UBL5|59286|ubiquitin-like 5	AK128885|UBL5|59286|ubiquitin-like 5	AK311889|UBL5|59286|ubiquitin-like 5	NM_024292|UBL5|59286|ubiquitin-like 5
hg19_v1_chr10_-_104262404_104262511	0.00530063	SOX2.p2	AM393135|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	DQ892689|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	DQ895934|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	BC026016|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	BC000693|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	Z14978|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	X82206|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK302072|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK312506|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK297362|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK297620|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	NM_005736|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
hg19_v1_chrX_+_30265270_30265322	0.0052846	SOX2.p2	NM_177404|MAGEB1|4112|melanoma antigen family B, 1	BC013772|MAGEB1|4112|melanoma antigen family B, 1
hg19_v1_chr9_-_3223007_3223066	0.00527865	SOX2.p2	
hg19_v1_chr1_-_224033603_224033644	0.00525119	SOX2.p2	BC046150|TP53BP2|7159|tumor protein p53 binding protein, 2	AJ318888|TP53BP2|7159|tumor protein p53 binding protein, 2	U58334|TP53BP2|7159|tumor protein p53 binding protein, 2	BC058918|TP53BP2|7159|tumor protein p53 binding protein, 2
hg19_v1_chr9_-_120177326_120177342	0.00524768	SOX2.p2	BX649176|ASTN2|23245|astrotactin 2
hg19_v1_chr14_+_90863302_90863345	0.00524744	SOX2.p2	NM_006888|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)
hg19_v1_chr17_+_73008744_73008810	0.00524123	SOX2.p2	AK222553|ICT1|3396|immature colon carcinoma transcript 1	AK314138|ICT1|3396|immature colon carcinoma transcript 1	BC015335|ICT1|3396|immature colon carcinoma transcript 1	NM_001545|ICT1|3396|immature colon carcinoma transcript 1	X81788|ICT1|3396|immature colon carcinoma transcript 1	DQ890655|ICT1|3396|immature colon carcinoma transcript 1	DQ893834|ICT1|3396|immature colon carcinoma transcript 1	BT007111|ICT1|3396|immature colon carcinoma transcript 1
hg19_v1_chr1_-_224621714_224621807	0.00524105	SOX2.p2	AK307909|WDR26|80232|WD repeat domain 26	BC034498|WDR26|80232|WD repeat domain 26
hg19_v1_chr1_+_59775749_59775758	0.00523806	SOX2.p2	NM_001244714|FGGY|55277|FGGY carbohydrate kinase domain containing	AK054842|FGGY|55277|FGGY carbohydrate kinase domain containing
hg19_v1_chr11_-_73881859_73882278	0.00521769	SOX2.p2	AB231764|C2CD3|26005|C2 calcium-dependent domain containing 3	AK092089|C2CD3|26005|C2 calcium-dependent domain containing 3	NM_015531|C2CD3|26005|C2 calcium-dependent domain containing 3
hg19_v1_chr8_-_66753968_66753968	0.00521489	SOX2.p2	NM_001242318|PDE7A|5150|phosphodiesterase 7A
hg19_v1_chr11_+_94800055_94800281	0.00520835	SOX2.p2	NM_032102|SRSF8|10929|serine/arginine-rich splicing factor 8	AK312514|SRSF8|10929|serine/arginine-rich splicing factor 8	AK023379|SRSF8|10929|serine/arginine-rich splicing factor 8
hg19_v1_chr14_+_79745653_79745755	0.00519169	SOX2.p2	NM_001105250|NRXN3|9369|neurexin 3	NM_138970|NRXN3|9369|neurexin 3	AK056530|NRXN3|9369|neurexin 3	BC059368|NRXN3|9369|neurexin 3	BC068469|NRXN3|9369|neurexin 3
hg19_v1_chr4_-_141677470_141677529	0.00518879	SOX2.p2	NM_015130|TBC1D9|23158|TBC1 domain family, member 9 (with GRAM domain)
hg19_v1_chr5_-_79866303_79866303	0.0051787	SOX2.p2	NM_001004441|ANKRD34B|340120|ankyrin repeat domain 34B
hg19_v1_chr3_-_57583090_57583148	0.00516604	SOX2.p2	BC022866|ARF4|378|ADP-ribosylation factor 4	BC016325|ARF4|378|ADP-ribosylation factor 4
hg19_v1_chr1_+_226250421_226250431	0.00516537	SOX2.p2	AK291102|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4	AK293541|H3F3A|3020|H3 histone, family 3A	BC029405|H3F3A|3020|H3 histone, family 3A	BC067757|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4	BC095447|H3F3A|3020|H3 histone, family 3A	M11354|H3F3A|3020|H3 histone, family 3A	BC066901|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4
hg19_v1_chrX_+_48334400_48334694	0.00515231	SOX2.p2	AK024023|FTSJ1|24140|FtsJ homolog 1 (E. coli)	NM_012280|FTSJ1|24140|FtsJ homolog 1 (E. coli)	NM_177439|FTSJ1|24140|FtsJ homolog 1 (E. coli)	AJ005892|FTSJ1|24140|FtsJ homolog 1 (E. coli)	AK297486|FTSJ1|24140|FtsJ homolog 1 (E. coli)	AK315138|FTSJ1|24140|FtsJ homolog 1 (E. coli)	BC021047|FTSJ1|24140|FtsJ homolog 1 (E. coli)	BC023584|FTSJ1|24140|FtsJ homolog 1 (E. coli)
hg19_v1_chr1_-_176176364_176176374	0.00514263	SOX2.p2	BC094728|RFWD2|64326|ring finger and WD repeat domain 2	NM_001001740|RFWD2|64326|ring finger and WD repeat domain 2	NM_022457|RFWD2|64326|ring finger and WD repeat domain 2
hg19_v1_chr4_-_149363498_149363671	0.00512918	SOX2.p2	AJ315514|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	M16801|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	AK304318|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	NM_000901|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	NM_001166104|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2
hg19_v1_chr5_+_36608430_36608563	0.00511599	SOX2.p2	NM_001166695|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	U03504|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AY954110|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg19_v1_chr1_+_154193757_154193813	0.00509345	SOX2.p2	AK124294|UBAP2L|9898|ubiquitin associated protein 2-like
hg19_v1_chr8_+_23101149_23101168	0.00507844	SOX2.p2	AK097202|CHMP7|91782|charged multivesicular body protein 7	NM_152272|CHMP7|91782|charged multivesicular body protein 7	BC042050|CHMP7|91782|charged multivesicular body protein 7
hg19_v1_chr6_+_30594607_30594779	0.00506615	SOX2.p2	NM_024909|ATAT1|79969|alpha tubulin acetyltransferase 1	BC006105|ATAT1|79969|alpha tubulin acetyltransferase 1	AK023220|ATAT1|79969|alpha tubulin acetyltransferase 1	AK298743|ATAT1|79969|alpha tubulin acetyltransferase 1	AK225107|ATAT1|79969|alpha tubulin acetyltransferase 1	AB075512|ATAT1|79969|alpha tubulin acetyltransferase 1	BC047303|ATAT1|79969|alpha tubulin acetyltransferase 1	NM_001031722|ATAT1|79969|alpha tubulin acetyltransferase 1	NM_001190724|ATAT1|79969|alpha tubulin acetyltransferase 1	AL833858|ATAT1|79969|alpha tubulin acetyltransferase 1	BC025755|ATAT1|79969|alpha tubulin acetyltransferase 1	AK297661|ATAT1|79969|alpha tubulin acetyltransferase 1
hg19_v1_chr14_+_103059091_103059232	0.00506268	SOX2.p2	AF155595|RCOR1|23186|REST corepressor 1
hg19_v1_chr6_+_43738394_43738674	0.00504996	SOX2.p2	BC011177|VEGFA|7422|vascular endothelial growth factor A	BC065522|VEGFA|7422|vascular endothelial growth factor A
hg19_v1_chr12_+_53845911_53845945	0.00504242	SOX2.p2	BC035420|PCBP2|5094|poly(rC) binding protein 2
hg19_v1_chr15_-_41836458_41836471	0.00501041	SOX2.p2	AK022794|RPAP1|26015|RNA polymerase II associated protein 1	NM_015540|RPAP1|26015|RNA polymerase II associated protein 1	AK308884|RPAP1|26015|RNA polymerase II associated protein 1
hg19_v1_chr11_-_3013522_3013529	0.00499999	SOX2.p2	AK299515|NAP1L4|4676|nucleosome assembly protein 1-like 4
hg19_v1_chr22_-_41940319_41940388	0.00498351	SOX2.p2	AB051452|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)	BC088367|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)	BC017248|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)
hg19_v1_chr2_-_158731622_158731622	0.00498347	SOX2.p2	BC033867|ACVR1|90|activin A receptor, type I	BC036748|ACVR1|90|activin A receptor, type I	NM_001105|ACVR1|90|activin A receptor, type I
hg19_v1_chr16_+_31724564_31724567	0.00496952	SOX2.p2	AL832197|ZNF720|124411|zinc finger protein 720
hg19_v1_chr12_+_9822205_9822330	0.0049642	SOX2.p2	BC063128|CLEC2D|29121|C-type lectin domain family 2, member D	NM_001197318|CLEC2D|29121|C-type lectin domain family 2, member D	NM_013269|CLEC2D|29121|C-type lectin domain family 2, member D	AK310150|CLEC2D|29121|C-type lectin domain family 2, member D	NM_001004419|CLEC2D|29121|C-type lectin domain family 2, member D	AK310554|CLEC2D|29121|C-type lectin domain family 2, member D	AK313554|CLEC2D|29121|C-type lectin domain family 2, member D	BC019883|CLEC2D|29121|C-type lectin domain family 2, member D	AF133299|CLEC2D|29121|C-type lectin domain family 2, member D	AF285087|CLEC2D|29121|C-type lectin domain family 2, member D	FN813349|CLEC2D|29121|C-type lectin domain family 2, member D	FN813350|CLEC2D|29121|C-type lectin domain family 2, member D	FN813351|CLEC2D|29121|C-type lectin domain family 2, member D	NM_001197317|CLEC2D|29121|C-type lectin domain family 2, member D	NM_001197319|CLEC2D|29121|C-type lectin domain family 2, member D
hg19_v1_chr1_-_43637969_43638240	0.00495111	SOX2.p2	AK299476|EBNA1BP2|10969|EBNA1 binding protein 2	AK295006|EBNA1BP2|10969|EBNA1 binding protein 2	NM_006824|EBNA1BP2|10969|EBNA1 binding protein 2	NM_001159936|EBNA1BP2|10969|EBNA1 binding protein 2
hg19_v1_chr8_-_110693233_110693233	0.00493466	SOX2.p2	AK290469|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099745|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099746|SYBU|55638|syntabulin (syntaxin-interacting)
hg19_v1_chr19_+_10362886_10362910	0.00492592	SOX2.p2	BC009858|MRPL4|51073|mitochondrial ribosomal protein L4
hg19_v1_chr15_-_43662107_43662259	0.00492334	SOX2.p2	AF525399|ZSCAN29|146050|zinc finger and SCAN domain containing 29	BC109270|ZSCAN29|146050|zinc finger and SCAN domain containing 29	BC109271|ZSCAN29|146050|zinc finger and SCAN domain containing 29	AK122788|ZSCAN29|146050|zinc finger and SCAN domain containing 29	NM_152455|ZSCAN29|146050|zinc finger and SCAN domain containing 29	BC043612|ZSCAN29|146050|zinc finger and SCAN domain containing 29
hg19_v1_chr20_-_31331374_31331396	0.00490954	SOX2.p2	BC047440|COMMD7|149951|COMM domain containing 7
hg19_v1_chr13_+_111855406_111855439	0.00490511	SOX2.p2	AK300272|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7
hg19_v1_chr4_-_103266577_103266692	0.00490406	SOX2.p2	AF193052|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	BC012125|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	NM_001135146|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8
hg19_v1_chr18_+_29078026_29078260	0.00489706	SOX2.p2	NM_001943|DSG2|1829|desmoglein 2	BC099655|DSG2|1829|desmoglein 2	BC099656|DSG2|1829|desmoglein 2	BC099657|DSG2|1829|desmoglein 2	Z26317|DSG2|1829|desmoglein 2	AK308408|DSG2|1829|desmoglein 2
hg19_v1_chr7_+_27779743_27779807	0.00489201	SOX2.p2	AK314292|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK296720|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	BC024600|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK301064|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AF090891|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK000098|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AL136586|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1
hg19_v1_chr9_-_19378815_19378917	0.00488276	SOX2.p2	BC035447|RPS6|6194|ribosomal protein S6
hg19_v1_chr17_+_44101549_44101592	0.00488276	SOX2.p2	AB073354|MAPT|4137|microtubule-associated protein tau
hg19_v1_chr3_-_127541160_127541700	0.00488064	SOX2.p2	CR456835|MGLL|11343|monoglyceride lipase	AK304844|MGLL|11343|monoglyceride lipase	BC000551|MGLL|11343|monoglyceride lipase	U67963|MGLL|11343|monoglyceride lipase	AK315529|MGLL|11343|monoglyceride lipase	BC006230|MGLL|11343|monoglyceride lipase	NM_007283|MGLL|11343|monoglyceride lipase
hg19_v1_chr17_-_44270144_44270165	0.00487759	SOX2.p2	BX538006|KIAA1267|284058|KIAA1267	NM_001193466|KIAA1267|284058|KIAA1267
hg19_v1_chr7_+_100209941_100210203	0.00486154	SOX2.p2	NM_001040098|MOSPD3|64598|motile sperm domain containing 3	NM_001040099|MOSPD3|64598|motile sperm domain containing 3	NM_023948|MOSPD3|64598|motile sperm domain containing 3	BC011653|MOSPD3|64598|motile sperm domain containing 3	BC009482|MOSPD3|64598|motile sperm domain containing 3	BC028475|MOSPD3|64598|motile sperm domain containing 3	BC005042|MOSPD3|64598|motile sperm domain containing 3
hg19_v1_chr6_-_108582124_108582163	0.00484067	SOX2.p2	BT007114|SNX3|8724|sorting nexin 3	CR456898|SNX3|8724|sorting nexin 3	EU831975|SNX3|8724|sorting nexin 3	EU832068|SNX3|8724|sorting nexin 3	AF062483|SNX3|8724|sorting nexin 3	AB047360|SNX3|8724|sorting nexin 3	AF034546|SNX3|8724|sorting nexin 3
hg19_v1_chr20_+_47835954_47835963	0.00482152	SOX2.p2	AK022979|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
hg19_v1_chr5_-_60458146_60458210	0.00481123	SOX2.p2	BC146876|C5orf43|643155|chromosome 5 open reading frame 43	BC146881|C5orf43|643155|chromosome 5 open reading frame 43	BC014242|C5orf43|643155|chromosome 5 open reading frame 43	BC047489|C5orf43|643155|chromosome 5 open reading frame 43
hg19_v1_chr7_+_129007942_129008030	0.00481041	SOX2.p2	NM_001130723|AHCYL2|23382|adenosylhomocysteinase-like 2
hg19_v1_chr1_+_43148096_43148097	0.0047783	SOX2.p2	AK309996|YBX1|4904|Y box binding protein 1	AK311708|YBX1|4904|Y box binding protein 1
hg19_v1_chr6_-_105850765_105850927	0.00476776	SOX2.p2	AB020018|PREP|5550|prolyl endopeptidase	AY660966|PREP|5550|prolyl endopeptidase	D21102|PREP|5550|prolyl endopeptidase	X74496|PREP|5550|prolyl endopeptidase	AB028867|PREP|5550|prolyl endopeptidase	DQ893427|PREP|5550|prolyl endopeptidase	DQ896742|PREP|5550|prolyl endopeptidase
hg19_v1_chr1_+_43148048_43148073	0.00475357	SOX2.p2	NM_004559|YBX1|4904|Y box binding protein 1
hg19_v1_chr6_+_34204647_34204654	0.00475195	SOX2.p2	AK096863|HMGA1|3159|high mobility group AT-hook 1	M23616|HMGA1|3159|high mobility group AT-hook 1	M23617|HMGA1|3159|high mobility group AT-hook 1	NM_145901|HMGA1|3159|high mobility group AT-hook 1	NM_145902|HMGA1|3159|high mobility group AT-hook 1	AK301434|HMGA1|3159|high mobility group AT-hook 1
hg19_v1_chr18_+_39535211_39535256	0.00474238	SOX2.p2	BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3	AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3	BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3	AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3	BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3	DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3	DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3
hg19_v1_chr5_-_127873734_127873949	0.00473082	SOX2.p2	NM_001999|FBN2|2201|fibrillin 2	AF193046|FBN2|2201|fibrillin 2
hg19_v1_chr1_-_176176376_176176377	0.00471664	SOX2.p2	AF527539|RFWD2|64326|ring finger and WD repeat domain 2
hg19_v1_chr1_-_33813261_33813332	0.0047113	SOX2.p2	
hg19_v1_chr16_+_2588000_2588020	0.00471026	SOX2.p2	BC006339|PDPK1|5170|3-phosphoinositide dependent protein kinase-1	BC012103|PDPK1|5170|3-phosphoinositide dependent protein kinase-1
hg19_v1_chr1_+_150266261_150266340	0.00468399	SOX2.p2	NM_018997|MRPS21|54460|mitochondrial ribosomal protein S21	NM_031901|MRPS21|54460|mitochondrial ribosomal protein S21	AK289467|MRPS21|54460|mitochondrial ribosomal protein S21	AB049955|MRPS21|54460|mitochondrial ribosomal protein S21	BC004566|MRPS21|54460|mitochondrial ribosomal protein S21	BC006554|MRPS21|54460|mitochondrial ribosomal protein S21	U79258|MRPS21|54460|mitochondrial ribosomal protein S21
hg19_v1_chr8_-_81787015_81787015	0.00467455	SOX2.p2	AK131274|ZNF704|619279|zinc finger protein 704	NM_001033723|ZNF704|619279|zinc finger protein 704
hg19_v1_chr22_-_41940391_41940609	0.00466595	SOX2.p2	AY092087|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)	AK026524|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)	AK129663|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)	NM_138338|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)	NM_001018050|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)	NM_001018052|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)	CR456459|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)
hg19_v1_chr11_-_114271052_114271297	0.00466132	SOX2.p2	CR457222|C11orf71|54494|chromosome 11 open reading frame 71	BC071695|C11orf71|54494|chromosome 11 open reading frame 71	NM_019021|C11orf71|54494|chromosome 11 open reading frame 71	BC009041|C11orf71|54494|chromosome 11 open reading frame 71	AK000017|C11orf71|54494|chromosome 11 open reading frame 71
hg19_v1_chr18_+_29027731_29027757	0.00465017	SOX2.p2	AK290367|DSG3|1830|desmoglein 3	NM_001944|DSG3|1830|desmoglein 3	M76482|DSG3|1830|desmoglein 3
hg19_v1_chr14_-_23446431_23446431	0.00463722	SOX2.p2	AK096128|AJUBA|84962|ajuba LIM protein	NM_198086|AJUBA|84962|ajuba LIM protein
hg19_v1_chr1_-_31538553_31538631	0.00463564	SOX2.p2	NM_001020658|PUM1|9698|pumilio homolog 1 (Drosophila)	NM_014676|PUM1|9698|pumilio homolog 1 (Drosophila)	AK294477|PUM1|9698|pumilio homolog 1 (Drosophila)
hg19_v1_chr6_-_30640618_30640780	0.00462371	SOX2.p2	DQ895906|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	BC002789|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	AB001601|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	AK312264|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	BC008825|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16	BC009392|DHX16|8449|DEAH (Asp-Glu-Ala-His) box polypeptide 16
hg19_v1_chr11_+_67195886_67196031	0.0046034	SOX2.p2	NM_003952|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	BC136564|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	BC000094|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AK297527|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AB019245|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AB208827|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	BC006106|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AF099739|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AB016869|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	AF076931|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2
hg19_v1_chr1_+_116925991_116925991	0.00457032	SOX2.p2	AK296362|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide	NM_001160234|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide
hg19_v1_chr16_-_188258_188651	0.00456505	SOX2.p2	AK298795|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	BC004185|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	BC012825|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	AK300736|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	BC020392|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)
hg19_v1_chr12_-_109915093_109915122	0.00455356	SOX2.p2	AF113208|KCTD10|83892|potassium channel tetramerisation domain containing 10	BC040062|KCTD10|83892|potassium channel tetramerisation domain containing 10	AK056912|KCTD10|83892|potassium channel tetramerisation domain containing 10	AK222548|KCTD10|83892|potassium channel tetramerisation domain containing 10
hg19_v1_chr22_+_23522743_23522858	0.00454442	SOX2.p2	AB209991|BCR|613|breakpoint cluster region
hg19_v1_chr5_+_121647773_121647943	0.00454025	SOX2.p2	DQ227317|SNCAIP|9627|synuclein, alpha interacting protein	NM_001242935|SNCAIP|9627|synuclein, alpha interacting protein	NM_005460|SNCAIP|9627|synuclein, alpha interacting protein	BC094759|SNCAIP|9627|synuclein, alpha interacting protein	BC040552|SNCAIP|9627|synuclein, alpha interacting protein	AK304646|SNCAIP|9627|synuclein, alpha interacting protein	AK310835|SNCAIP|9627|synuclein, alpha interacting protein	AF076929|SNCAIP|9627|synuclein, alpha interacting protein	BC033743|SNCAIP|9627|synuclein, alpha interacting protein
hg19_v1_chr1_-_200378832_200378986	0.00453819	SOX2.p2	AF125158|ZNF281|23528|zinc finger protein 281	BC051905|ZNF281|23528|zinc finger protein 281
hg19_v1_chr11_-_129062092_129062092	0.00452678	SOX2.p2	EF127492|ARHGAP32|9743|Rho GTPase activating protein 32	NM_001142685|ARHGAP32|9743|Rho GTPase activating protein 32
hg19_v1_chr3_+_140770742_140770772	0.00451672	SOX2.p2	AF403029|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4	BC008324|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4	NM_080862|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4	AK056367|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4
hg19_v1_chr19_-_12834628_12834841	0.00451115	SOX2.p2	AF007748|TNPO2|30000|transportin 2	AK056183|TNPO2|30000|transportin 2	NM_001136195|TNPO2|30000|transportin 2
hg19_v1_chr15_+_55700722_55700868	0.00450912	SOX2.p2	NM_001198784|FLJ27352|145788|uncharacterized LOC145788	AK130862|FLJ27352|145788|uncharacterized LOC145788	BX648577|FLJ27352|145788|uncharacterized LOC145788
hg19_v1_chr9_-_36375965_36376036	0.00450633	SOX2.p2	AK024996|RNF38|152006|ring finger protein 38	DQ895235|RNF38|152006|ring finger protein 38	EU176239|RNF38|152006|ring finger protein 38
hg19_v1_chr14_+_69726680_69726680	0.00450466	SOX2.p2	NM_001168368|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	NM_020692|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1
hg19_v1_chr17_+_13972841_13972922	0.00449971	SOX2.p2	BC000060|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	BC006394|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	U09466|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK294213|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK295925|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	BT006985|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	DQ893604|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	DQ895073|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)
hg19_v1_chr3_+_49235860_49235860	0.00449487	SOX2.p2	BC036202|CCDC36|339834|coiled-coil domain containing 36	NM_178173|CCDC36|339834|coiled-coil domain containing 36
hg19_v1_chr1_-_68697997_68698317	0.00448997	SOX2.p2	BC137109|WLS|79971|wntless homolog (Drosophila)	BC137113|WLS|79971|wntless homolog (Drosophila)	BC110826|WLS|79971|wntless homolog (Drosophila)	AB097018|WLS|79971|wntless homolog (Drosophila)	AK074984|WLS|79971|wntless homolog (Drosophila)	AK301613|WLS|79971|wntless homolog (Drosophila)	BX648748|WLS|79971|wntless homolog (Drosophila)	BX538320|WLS|79971|wntless homolog (Drosophila)	NM_001002292|WLS|79971|wntless homolog (Drosophila)	NM_001193334|WLS|79971|wntless homolog (Drosophila)	AK074583|WLS|79971|wntless homolog (Drosophila)	AK309779|WLS|79971|wntless homolog (Drosophila)	DQ323735|WLS|79971|wntless homolog (Drosophila)	AY359035|WLS|79971|wntless homolog (Drosophila)	NM_024911|WLS|79971|wntless homolog (Drosophila)
hg19_v1_chr15_-_65360297_65360387	0.00448391	SOX2.p2	BC053734|RASL12|51285|RAS-like, family 12	NM_016563|RASL12|51285|RAS-like, family 12
hg19_v1_chr10_-_73848309_73848372	0.00447611	SOX2.p2	AJ001453|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2
hg19_v1_chr8_-_110342107_110342162	0.0044676	SOX2.p2	AF283302|NUDCD1|84955|NudC domain containing 1	AK311583|NUDCD1|84955|NudC domain containing 1	AF521133|NUDCD1|84955|NudC domain containing 1	NM_001128211|NUDCD1|84955|NudC domain containing 1	AK307663|NUDCD1|84955|NudC domain containing 1
hg19_v1_chr2_+_68694669_68694860	0.00446653	SOX2.p2	AK290841|APLF|200558|aprataxin and PNKP like factor	NM_173545|APLF|200558|aprataxin and PNKP like factor	AK308186|APLF|200558|aprataxin and PNKP like factor	BC041144|APLF|200558|aprataxin and PNKP like factor
hg19_v1_chr1_+_200860619_200860674	0.00445582	SOX2.p2	NM_018265|C1orf106|55765|chromosome 1 open reading frame 106	AK001583|C1orf106|55765|chromosome 1 open reading frame 106	AK001763|C1orf106|55765|chromosome 1 open reading frame 106	BC106877|C1orf106|55765|chromosome 1 open reading frame 106
hg19_v1_chr21_-_46293598_46293608	0.00445185	SOX2.p2	BC012858|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein	AK298557|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein
hg19_v1_chr2_+_106432922_106433029	0.0044515	SOX2.p2	AF047487|NCK2|8440|NCK adaptor protein 2	BC007195|NCK2|8440|NCK adaptor protein 2
hg19_v1_chr1_-_52344306_52344360	0.00445064	SOX2.p2	AY049784|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg19_v1_chr3_+_150264576_150264596	0.00443049	SOX2.p2	BX647951|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AL833101|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	BC011885|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AF497978|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	DQ896788|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	EU176412|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AF172818|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa
hg19_v1_chr22_+_20105095_20105118	0.00440151	SOX2.p2	CR456556|RANBP1|5902|RAN binding protein 1
hg19_v1_chrX_+_57618440_57618481	0.00439683	SOX2.p2	AK289766|ZXDB|158586|zinc finger, X-linked, duplicated B
hg19_v1_chr17_-_47492215_47492215	0.00438098	SOX2.p2	BC095460|PHB|5245|prohibitin
hg19_v1_chr3_+_44771097_44771123	0.00437654	SOX2.p2	AK316574|ZNF501|115560|zinc finger protein 501	AK054613|ZNF501|115560|zinc finger protein 501	AK297216|ZNF501|115560|zinc finger protein 501	BC013762|ZNF501|115560|zinc finger protein 501	NM_145044|ZNF501|115560|zinc finger protein 501
hg19_v1_chr4_+_142142073_142142100	0.00437522	SOX2.p2	AK294089|ZNF330|27309|zinc finger protein 330	AK223609|ZNF330|27309|zinc finger protein 330	AK002106|ZNF330|27309|zinc finger protein 330	AJ006591|ZNF330|27309|zinc finger protein 330
hg19_v1_chr13_+_97999289_97999300	0.00436666	SOX2.p2	
hg19_v1_chr6_+_122720685_122720706	0.00436571	SOX2.p2	NM_001135564|HSF2|3298|heat shock transcription factor 2	NM_001243094|HSF2|3298|heat shock transcription factor 2	NM_004506|HSF2|3298|heat shock transcription factor 2
hg19_v1_chr3_+_150264514_150264575	0.00434632	SOX2.p2	AF212241|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AK298586|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AK027356|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	AK293993|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa	NM_032025|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa
hg19_v1_chr3_+_9773494_9773603	0.00434373	SOX2.p2	AL713696|BRPF1|7862|bromodomain and PHD finger containing, 1
hg19_v1_chr1_-_234743820_234743842	0.00434287	SOX2.p2	
hg19_v1_chr22_-_31742329_31742340	0.00434153	SOX2.p2	BC051357|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1
hg19_v1_chr1_-_149899623_149899670	0.0043137	SOX2.p2	DQ892971|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	DQ896220|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	EU176749|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	AK223322|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	BC004273|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	BC013886|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	AK310495|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa
hg19_v1_chr3_-_129158849_129158894	0.00430957	SOX2.p2	AF532602|MBD4|8930|methyl-CpG binding domain protein 4	AF072250|MBD4|8930|methyl-CpG binding domain protein 4	NM_003925|MBD4|8930|methyl-CpG binding domain protein 4	AK303013|MBD4|8930|methyl-CpG binding domain protein 4
hg19_v1_chr6_+_170615838_170615848	0.00429496	SOX2.p2	BC012177|FAM120B|84498|family with sequence similarity 120B	NM_032448|FAM120B|84498|family with sequence similarity 120B	AK296825|FAM120B|84498|family with sequence similarity 120B	AK296730|FAM120B|84498|family with sequence similarity 120B
hg19_v1_chr1_+_100316530_100316598	0.00428275	SOX2.p2	NM_000646|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84011|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	AB208867|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
hg19_v1_chr2_-_122159140_122159171	0.00428021	SOX2.p2	CR749627|CLASP1|23332|cytoplasmic linker associated protein 1
hg19_v1_chr6_-_33756905_33756916	0.00427001	SOX2.p2	BC039864|LEMD2|221496|LEM domain containing 2	NM_181336|LEMD2|221496|LEM domain containing 2
hg19_v1_chr10_+_115524577_115524577	0.00426946	SOX2.p2	BC037870|C10orf81|79949|chromosome 10 open reading frame 81	FJ236306|C10orf81|79949|chromosome 10 open reading frame 81	NM_182601|C10orf81|79949|chromosome 10 open reading frame 81
hg19_v1_chr1_+_155294217_155294367	0.00426164	SOX2.p2	AK298730|RUSC1|23623|RUN and SH3 domain containing 1	NM_014328|RUSC1|23623|RUN and SH3 domain containing 1	AK093777|RUSC1|23623|RUN and SH3 domain containing 1	BC001045|RUSC1|23623|RUN and SH3 domain containing 1	AK307736|RUSC1|23623|RUN and SH3 domain containing 1	AK074485|RUSC1|23623|RUN and SH3 domain containing 1	AB026894|RUSC1|23623|RUN and SH3 domain containing 1	AK074982|RUSC1|23623|RUN and SH3 domain containing 1	BC028055|RUSC1|23623|RUN and SH3 domain containing 1	BC004293|RUSC1|23623|RUN and SH3 domain containing 1	BX640612|RUSC1|23623|RUN and SH3 domain containing 1
hg19_v1_chr4_-_103266286_103266367	0.00423524	SOX2.p2	AB040120|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	NM_022154|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	AK304274|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8
hg19_v1_chr8_+_23386468_23386579	0.00421138	SOX2.p2	AK074708|SLC25A37|51312|solute carrier family 25, member 37	AK223194|SLC25A37|51312|solute carrier family 25, member 37	AF223466|SLC25A37|51312|solute carrier family 25, member 37	AY032628|SLC25A37|51312|solute carrier family 25, member 37	BC015013|SLC25A37|51312|solute carrier family 25, member 37	HQ258387|SLC25A37|51312|solute carrier family 25, member 37	AK075313|SLC25A37|51312|solute carrier family 25, member 37	AL833186|SLC25A37|51312|solute carrier family 25, member 37
hg19_v1_chr11_-_64889581_64889671	0.00420782	SOX2.p2	BC051834|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	BC033877|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	D28403|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	X65923|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	AK026639|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	NM_001997|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed
hg19_v1_chr20_-_10654139_10654269	0.00419558	SOX2.p2	U77720|JAG1|182|jagged 1	HQ258535|JAG1|182|jagged 1	AK312722|JAG1|182|jagged 1
hg19_v1_chr16_+_4902076_4902215	0.00419493	SOX2.p2	NM_016936|UBN1|29855|ubinuclein 1	AF108461|UBN1|29855|ubinuclein 1
hg19_v1_chr15_+_93447702_93447819	0.00419448	SOX2.p2	AK295909|CHD2|1106|chromodomain helicase DNA binding protein 2
hg19_v1_chr2_-_132121730_132121730	0.0041783	SOX2.p2	NM_001077637|WTH3DI|150786|RAB6C-like
hg19_v1_chr11_+_3829765_3829783	0.00415551	SOX2.p2	NM_014489|PGAP2|27315|post-GPI attachment to proteins 2	AF159615|PGAP2|27315|post-GPI attachment to proteins 2
hg19_v1_chr4_+_1723212_1723223	0.00413998	SOX2.p2	NM_006342|TACC3|10460|transforming, acidic coiled-coil containing protein 3
hg19_v1_chr11_+_36317724_36317837	0.00413	SOX2.p2	NM_001160167|PRR5L|79899|proline rich 5 like	AK055042|PRR5L|79899|proline rich 5 like
hg19_v1_chr1_+_236686738_236686738	0.0041296	SOX2.p2	AF074000|LGALS8|3964|lectin, galactoside-binding, soluble, 8	AF074001|LGALS8|3964|lectin, galactoside-binding, soluble, 8	AF074002|LGALS8|3964|lectin, galactoside-binding, soluble, 8	NM_006499|LGALS8|3964|lectin, galactoside-binding, soluble, 8	NM_201543|LGALS8|3964|lectin, galactoside-binding, soluble, 8
hg19_v1_chr1_-_38019828_38019954	0.00408174	SOX2.p2	AY081909|SNIP1|79753|Smad nuclear interacting protein 1	AK297176|SNIP1|79753|Smad nuclear interacting protein 1	AK300796|SNIP1|79753|Smad nuclear interacting protein 1	AK027622|SNIP1|79753|Smad nuclear interacting protein 1	AK022615|SNIP1|79753|Smad nuclear interacting protein 1	BC027040|SNIP1|79753|Smad nuclear interacting protein 1	NM_024700|SNIP1|79753|Smad nuclear interacting protein 1	AK293229|SNIP1|79753|Smad nuclear interacting protein 1	AK315574|SNIP1|79753|Smad nuclear interacting protein 1
hg19_v1_chr12_-_45270632_45270632	0.00404062	SOX2.p2	AK299733|NELL2|4753|NEL-like 2 (chicken)	NM_001145107|NELL2|4753|NEL-like 2 (chicken)
hg19_v1_chr5_+_95997871_95997986	0.0040328	SOX2.p2	BC016066|CAST|831|calpastatin	NM_001042440|CAST|831|calpastatin
hg19_v1_chr1_+_112938799_112938853	0.00402846	SOX2.p2	NM_018704|CTTNBP2NL|55917|CTTNBP2 N-terminal like	AK023340|CTTNBP2NL|55917|CTTNBP2 N-terminal like
hg19_v1_chr5_-_60458228_60458306	0.00401649	SOX2.p2	BC103711|C5orf43|643155|chromosome 5 open reading frame 43	BX648459|C5orf43|643155|chromosome 5 open reading frame 43	BC066550|C5orf43|643155|chromosome 5 open reading frame 43	BX538015|C5orf43|643155|chromosome 5 open reading frame 43	AK291180|C5orf43|643155|chromosome 5 open reading frame 43	NM_001048249|C5orf43|643155|chromosome 5 open reading frame 43
hg19_v1_chr1_+_43148168_43148173	0.00400977	SOX2.p2	BC015208|YBX1|4904|Y box binding protein 1
hg19_v1_chr11_+_450346_450396	0.00399467	SOX2.p2	AK311723|PTDSS2|81490|phosphatidylserine synthase 2	AL834357|PTDSS2|81490|phosphatidylserine synthase 2
hg19_v1_chr2_-_198175494_198175544	0.00398242	SOX2.p2	BC016985|ANKRD44|91526|ankyrin repeat domain 44	AK301209|ANKRD44|91526|ankyrin repeat domain 44	NM_001195144|ANKRD44|91526|ankyrin repeat domain 44	NM_153697|ANKRD44|91526|ankyrin repeat domain 44
hg19_v1_chr13_-_50367027_50367220	0.00397058	SOX2.p2	BC035090|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)	NM_002267|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)
hg19_v1_chr8_-_119123804_119124118	0.00397054	SOX2.p2	AK313129|EXT1|2131|exostosin 1	S79639|EXT1|2131|exostosin 1	NM_000127|EXT1|2131|exostosin 1
hg19_v1_chr11_-_62473502_62473890	0.00395726	SOX2.p2	BC041640|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	BC012140|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	BC004911|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	AK075317|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	AK225029|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	AK027524|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	NM_001130702|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	NM_032667|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)
hg19_v1_chr10_-_64576123_64576171	0.00395538	SOX2.p2	NM_000399|EGR2|1959|early growth response 2	NM_001136177|EGR2|1959|early growth response 2	NM_001136179|EGR2|1959|early growth response 2
hg19_v1_chr12_-_109915127_109915158	0.00394693	SOX2.p2	AK092170|KCTD10|83892|potassium channel tetramerisation domain containing 10	AK027543|KCTD10|83892|potassium channel tetramerisation domain containing 10	AY205299|KCTD10|83892|potassium channel tetramerisation domain containing 10	NM_031954|KCTD10|83892|potassium channel tetramerisation domain containing 10
hg19_v1_chr6_-_79944397_79944454	0.00393643	SOX2.p2	AK315391|HMGN3|9324|high mobility group nucleosomal binding domain 3	AY043282|HMGN3|9324|high mobility group nucleosomal binding domain 3	NM_001201362|HMGN3|9324|high mobility group nucleosomal binding domain 3	NM_001201363|HMGN3|9324|high mobility group nucleosomal binding domain 3	NM_004242|HMGN3|9324|high mobility group nucleosomal binding domain 3	NM_138730|HMGN3|9324|high mobility group nucleosomal binding domain 3
hg19_v1_chr7_+_120628867_120628925	0.00392459	SOX2.p2	AL832638|C7orf58|79974|chromosome 7 open reading frame 58
hg19_v1_chr3_-_129158779_129158816	0.00391801	SOX2.p2	AK312878|MBD4|8930|methyl-CpG binding domain protein 4	AF114784|MBD4|8930|methyl-CpG binding domain protein 4
hg19_v1_chr12_+_53846086_53846147	0.00391105	SOX2.p2	AK292141|PCBP2|5094|poly(rC) binding protein 2	BC001155|PCBP2|5094|poly(rC) binding protein 2
hg19_v1_chr15_-_62352565_62352663	0.00390956	SOX2.p2	AK307518|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	AB037842|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	AJ608770|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	AJ608771|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	AJ626860|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	AJ626861|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	NM_001018088|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	NM_017684|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	NM_018080|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	NM_020821|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)
hg19_v1_chr1_-_1510260_1510284	0.00390644	SOX2.p2	NM_014188|SSU72|29101|SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae)
hg19_v1_chr11_-_92930978_92930997	0.00389904	SOX2.p2	
hg19_v1_chr17_+_13972718_13972840	0.00389627	SOX2.p2	NM_001303|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK312718|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)
hg19_v1_chr2_-_47403613_47403639	0.00389587	SOX2.p2	M19311|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	BC003354|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	BC006464|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)
hg19_v1_chr1_+_185014449_185014558	0.00389238	SOX2.p2	NM_007212|RNF2|6045|ring finger protein 2	AF141327|RNF2|6045|ring finger protein 2
hg19_v1_chr17_-_16097882_16097955	0.00389047	SOX2.p2	AB028970|NCOR1|9611|nuclear receptor corepressor 1	BC167431|NCOR1|9611|nuclear receptor corepressor 1	NM_001190438|NCOR1|9611|nuclear receptor corepressor 1	NM_001190440|NCOR1|9611|nuclear receptor corepressor 1	AF087856|NCOR1|9611|nuclear receptor corepressor 1	AF303586|NCOR1|9611|nuclear receptor corepressor 1
hg19_v1_chr2_+_103353341_103353423	0.00388857	SOX2.p2	AL832688|TMEM182|130827|transmembrane protein 182	AK054856|TMEM182|130827|transmembrane protein 182	BC107694|TMEM182|130827|transmembrane protein 182	BC073844|TMEM182|130827|transmembrane protein 182
hg19_v1_chr1_-_52344010_52344058	0.00388615	SOX2.p2	AK299271|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg19_v1_chr4_+_54243810_54243821	0.00388211	SOX2.p2	NM_001134937|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	NM_001134938|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	NM_030917|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr2_+_201676774_201677130	0.00387901	SOX2.p2	AK301511|BZW1|9689|basic leucine zipper and W2 domains 1	NM_001207069|BZW1|9689|basic leucine zipper and W2 domains 1	NM_001207068|BZW1|9689|basic leucine zipper and W2 domains 1	AK297227|BZW1|9689|basic leucine zipper and W2 domains 1
hg19_v1_chr5_-_40835325_40835386	0.00386866	SOX2.p2	AK311827|RPL37|6167|ribosomal protein L37	NM_000997|RPL37|6167|ribosomal protein L37
hg19_v1_chr8_+_76320106_76320270	0.00383592	SOX2.p2	BC054009|HNF4G|3174|hepatocyte nuclear factor 4, gamma	Z49826|HNF4G|3174|hepatocyte nuclear factor 4, gamma
hg19_v1_chr11_-_116658738_116658738	0.00383321	SOX2.p2	BC017349|ZNF259|8882|zinc finger protein 259	NM_003904|ZNF259|8882|zinc finger protein 259
hg19_v1_chr6_+_3259134_3259183	0.00381572	SOX2.p2	NM_001128591|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4	NM_001128592|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4	NM_001135750|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4
hg19_v1_chr6_+_126661221_126661319	0.00380115	SOX2.p2	BC039556|CENPW|387103|centromere protein W	NM_001012507|CENPW|387103|centromere protein W	AY902475|CENPW|387103|centromere protein W	BC062798|CENPW|387103|centromere protein W	BC046178|CENPW|387103|centromere protein W	BC017928|CENPW|387103|centromere protein W
hg19_v1_chr7_+_120628722_120628808	0.00378976	SOX2.p2	NM_024913|C7orf58|79974|chromosome 7 open reading frame 58	AK289978|C7orf58|79974|chromosome 7 open reading frame 58	AL832619|C7orf58|79974|chromosome 7 open reading frame 58
hg19_v1_chr18_-_44497307_44497520	0.0037878	SOX2.p2	AF077953|PIAS2|9063|protein inhibitor of activated STAT, 2	AF077954|PIAS2|9063|protein inhibitor of activated STAT, 2	DQ896421|PIAS2|9063|protein inhibitor of activated STAT, 2	EU176432|PIAS2|9063|protein inhibitor of activated STAT, 2	AK308143|PIAS2|9063|protein inhibitor of activated STAT, 2	BC111060|PIAS2|9063|protein inhibitor of activated STAT, 2	BC015190|PIAS2|9063|protein inhibitor of activated STAT, 2	AK294801|PIAS2|9063|protein inhibitor of activated STAT, 2	NM_004671|PIAS2|9063|protein inhibitor of activated STAT, 2	NM_173206|PIAS2|9063|protein inhibitor of activated STAT, 2
hg19_v1_chr14_-_35344490_35344525	0.00378569	SOX2.p2	BC108711|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg19_v1_chr1_-_228604305_228604457	0.00377713	SOX2.p2	AF156271|TRIM17|51127|tripartite motif containing 17	AK316379|TRIM17|51127|tripartite motif containing 17	BC023999|TRIM17|51127|tripartite motif containing 17	BC033788|TRIM17|51127|tripartite motif containing 17	AK301105|TRIM17|51127|tripartite motif containing 17	AK308774|TRIM17|51127|tripartite motif containing 17
hg19_v1_chr13_-_103411421_103411421	0.00377642	SOX2.p2	NM_001146197|CCDC168|643677|coiled-coil domain containing 168
hg19_v1_chr14_+_59951141_59951314	0.00377458	SOX2.p2	NM_001098625|JKAMP|51528|JNK1/MAPK8-associated membrane protein	NM_016475|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AF151047|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AF161445|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AF212245|JKAMP|51528|JNK1/MAPK8-associated membrane protein	BC010359|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK027591|JKAMP|51528|JNK1/MAPK8-associated membrane protein	BC005198|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK021683|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AL136696|JKAMP|51528|JNK1/MAPK8-associated membrane protein	BX161501|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK056145|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK298209|JKAMP|51528|JNK1/MAPK8-associated membrane protein
hg19_v1_chr7_+_27779706_27779742	0.00376354	SOX2.p2	NM_001079864|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	NM_001206902|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	NM_006024|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1
hg19_v1_chrX_-_13835012_13835171	0.00375603	SOX2.p2	AM392527|GPM6B|2824|glycoprotein M6B	AM392754|GPM6B|2824|glycoprotein M6B	AM392867|GPM6B|2824|glycoprotein M6B	AM392943|GPM6B|2824|glycoprotein M6B	AM392957|GPM6B|2824|glycoprotein M6B	AM392968|GPM6B|2824|glycoprotein M6B	AM392974|GPM6B|2824|glycoprotein M6B	AM393048|GPM6B|2824|glycoprotein M6B	AM393215|GPM6B|2824|glycoprotein M6B	AM393570|GPM6B|2824|glycoprotein M6B	AM393576|GPM6B|2824|glycoprotein M6B	AM393741|GPM6B|2824|glycoprotein M6B	AM393770|GPM6B|2824|glycoprotein M6B	AM393783|GPM6B|2824|glycoprotein M6B	AM393822|GPM6B|2824|glycoprotein M6B	DQ891541|GPM6B|2824|glycoprotein M6B	DQ894729|GPM6B|2824|glycoprotein M6B	EU832134|GPM6B|2824|glycoprotein M6B	EU832227|GPM6B|2824|glycoprotein M6B	BC008151|GPM6B|2824|glycoprotein M6B
hg19_v1_chr14_+_104029278_104029344	0.00375391	SOX2.p2	NM_032374|APOPT1|84334|apoptogenic 1	AK223092|APOPT1|84334|apoptogenic 1	AK223103|APOPT1|84334|apoptogenic 1	BC007412|APOPT1|84334|apoptogenic 1
hg19_v1_chr21_-_16437125_16437309	0.00375171	SOX2.p2	AK289786|NRIP1|8204|nuclear receptor interacting protein 1	NM_003489|NRIP1|8204|nuclear receptor interacting protein 1
hg19_v1_chr8_+_29952971_29953028	0.00374781	SOX2.p2	AK075363|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AF161461|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	DQ891897|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	DQ895083|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	CR541735|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	CR541760|LEPROTL1|23484|leptin receptor overlapping transcript-like 1
hg19_v1_chr3_-_38992051_38992051	0.00374395	SOX2.p2	AF109737|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit	AF150882|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit	NM_014139|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit
hg19_v1_chr4_+_54243731_54243808	0.00374141	SOX2.p2	AK295737|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr11_-_5706186_5706341	0.00373455	SOX2.p2	BC021258|TRIM5|85363|tripartite motif containing 5	BX647152|TRIM5|85363|tripartite motif containing 5	AK027593|TRIM5|85363|tripartite motif containing 5	NM_033034|TRIM5|85363|tripartite motif containing 5	NM_033092|TRIM5|85363|tripartite motif containing 5	NM_033093|TRIM5|85363|tripartite motif containing 5
hg19_v1_chr1_-_154155680_154155684	0.00372714	SOX2.p2	AK301674|TPM3|7170|tropomyosin 3	AK315504|TPM3|7170|tropomyosin 3	BX648485|TPM3|7170|tropomyosin 3
hg19_v1_chr5_+_137673953_137673955	0.00372681	SOX2.p2	AK027412|FAM53C|51307|family with sequence similarity 53, member C	AK310378|FAM53C|51307|family with sequence similarity 53, member C	AK315567|FAM53C|51307|family with sequence similarity 53, member C
hg19_v1_chr5_+_180650709_180650742	0.00372448	SOX2.p2	BC090953|TRIM41|90933|tripartite motif containing 41
hg19_v1_chr1_-_150241409_150241608	0.00372015	SOX2.p2	AY358951|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK300640|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK075452|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK298832|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK307358|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	NM_001077628|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	NM_001243771|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	NM_001243772|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	NM_016022|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)
hg19_v1_chr2_-_216289936_216290009	0.00371913	SOX2.p2	AF312399|FN1|2335|fibronectin 1
hg19_v1_chr6_-_88854989_88855083	0.00369193	SOX2.p2	BC095513|CNR1|1268|cannabinoid receptor 1 (brain)	AY766182|CNR1|1268|cannabinoid receptor 1 (brain)	AY995204|CNR1|1268|cannabinoid receptor 1 (brain)	BC100968|CNR1|1268|cannabinoid receptor 1 (brain)	BC100969|CNR1|1268|cannabinoid receptor 1 (brain)	BC100970|CNR1|1268|cannabinoid receptor 1 (brain)	BC100971|CNR1|1268|cannabinoid receptor 1 (brain)	DQ067455|CNR1|1268|cannabinoid receptor 1 (brain)	X81121|CNR1|1268|cannabinoid receptor 1 (brain)	AF107262|CNR1|1268|cannabinoid receptor 1 (brain)	BC074811|CNR1|1268|cannabinoid receptor 1 (brain)	BC074812|CNR1|1268|cannabinoid receptor 1 (brain)	NM_033181|CNR1|1268|cannabinoid receptor 1 (brain)	X81120|CNR1|1268|cannabinoid receptor 1 (brain)
hg19_v1_chr2_-_151344145_151344183	0.00368491	SOX2.p2	X97758|RND3|390|Rho family GTPase 3	BC012513|RND3|390|Rho family GTPase 3	AK298007|RND3|390|Rho family GTPase 3	NM_005168|RND3|390|Rho family GTPase 3	AK313224|RND3|390|Rho family GTPase 3
hg19_v1_chr11_+_63753827_63753896	0.00368239	SOX2.p2	AK000120|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1
hg19_v1_chr5_-_134734915_134734927	0.00367108	SOX2.p2	AK023409|H2AFY|9555|H2A histone family, member Y	AK296014|H2AFY|9555|H2A histone family, member Y	NM_001040158|H2AFY|9555|H2A histone family, member Y	NM_138609|H2AFY|9555|H2A histone family, member Y	NM_138610|H2AFY|9555|H2A histone family, member Y
hg19_v1_chr4_+_142142044_142142066	0.00367005	SOX2.p2	NM_014487|ZNF330|27309|zinc finger protein 330	AK315463|ZNF330|27309|zinc finger protein 330	BC004421|ZNF330|27309|zinc finger protein 330
hg19_v1_chr9_-_36401149_36401201	0.00366977	SOX2.p2	NM_194330|RNF38|152006|ring finger protein 38
hg19_v1_chr16_+_2588051_2588164	0.00364637	SOX2.p2	BC033494|PDPK1|5170|3-phosphoinositide dependent protein kinase-1	DQ892297|PDPK1|5170|3-phosphoinositide dependent protein kinase-1	DQ895496|PDPK1|5170|3-phosphoinositide dependent protein kinase-1	EU832784|PDPK1|5170|3-phosphoinositide dependent protein kinase-1	GQ129441|PDPK1|5170|3-phosphoinositide dependent protein kinase-1	CR536517|PDPK1|5170|3-phosphoinositide dependent protein kinase-1	BC040324|PDPK1|5170|3-phosphoinositide dependent protein kinase-1
hg19_v1_chr6_+_157099873_157099878	0.00363432	SOX2.p2	AF253515|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)
hg19_v1_chr11_-_71791434_71791599	0.00362401	SOX2.p2	BC004165|NUMA1|4926|nuclear mitotic apparatus protein 1	BC103765|NUMA1|4926|nuclear mitotic apparatus protein 1	AB210007|NUMA1|4926|nuclear mitotic apparatus protein 1	BC027493|NUMA1|4926|nuclear mitotic apparatus protein 1	BC043499|NUMA1|4926|nuclear mitotic apparatus protein 1	AK307577|NUMA1|4926|nuclear mitotic apparatus protein 1	Z11583|NUMA1|4926|nuclear mitotic apparatus protein 1	Z11584|NUMA1|4926|nuclear mitotic apparatus protein 1	NM_006185|NUMA1|4926|nuclear mitotic apparatus protein 1
hg19_v1_chr19_+_52873169_52873213	0.00361906	SOX2.p2	NM_001145434|ZNF880|400713|zinc finger protein 880	BC056265|ZNF880|400713|zinc finger protein 880	BC058819|ZNF880|400713|zinc finger protein 880	AK297834|ZNF880|400713|zinc finger protein 880	BC013198|ZNF880|400713|zinc finger protein 880	AF088022|ZNF880|400713|zinc finger protein 880
hg19_v1_chr12_-_56753912_56753915	0.00361443	SOX2.p2	AK308051|STAT2|6773|signal transducer and activator of transcription 2, 113kDa
hg19_v1_chr2_-_55276288_55276333	0.00361108	SOX2.p2	AK302741|RTN4|57142|reticulon 4	AF333336|RTN4|57142|reticulon 4	NM_207521|RTN4|57142|reticulon 4	AY123248|RTN4|57142|reticulon 4
hg19_v1_chr20_-_2644777_2644892	0.003609	SOX2.p2	BC019037|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	DQ892561|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	DQ895776|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	DQ895816|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	EU831924|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	EU832019|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	AK001905|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	BC001960|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	NM_006899|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	NM_174855|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	NM_174856|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	AK309488|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	AK315641|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	AK300485|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta
hg19_v1_chr12_+_72080136_72080318	0.00360218	SOX2.p2	AK001798|TMEM19|55266|transmembrane protein 19	AK223148|TMEM19|55266|transmembrane protein 19	AK315587|TMEM19|55266|transmembrane protein 19
hg19_v1_chr1_-_150241210_150241399	0.00360013	SOX2.p2	AF508787|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AY113698|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AY113699|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AF151835|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK075295|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AX775955|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC017699|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC008732|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC001230|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC015568|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK297680|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK298876|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK027879|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK314490|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AX775957|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC020590|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC009501|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)
hg19_v1_chr2_-_74875163_74875163	0.00359181	SOX2.p2	BC025997|C2orf65|130951|chromosome 2 open reading frame 65	NM_138804|C2orf65|130951|chromosome 2 open reading frame 65
hg19_v1_chr11_+_450260_450333	0.00359159	SOX2.p2	BC001210|PTDSS2|81490|phosphatidylserine synthase 2	NM_030783|PTDSS2|81490|phosphatidylserine synthase 2
hg19_v1_chr3_-_167371701_167371746	0.0035695	SOX2.p2	AK097556|WDR49|151790|WD repeat domain 49
hg19_v1_chr2_-_203776200_203776429	0.00356685	SOX2.p2	DQ892874|WDR12|55759|WD repeat domain 12	DQ896123|WDR12|55759|WD repeat domain 12	EF011617|WDR12|55759|WD repeat domain 12	BC008082|WDR12|55759|WD repeat domain 12	AF242546|WDR12|55759|WD repeat domain 12	AK299489|WDR12|55759|WD repeat domain 12	AK001743|WDR12|55759|WD repeat domain 12	AK022781|WDR12|55759|WD repeat domain 12	AK022782|WDR12|55759|WD repeat domain 12
hg19_v1_chr7_-_47622127_47622246	0.0035377	SOX2.p2	AB208995|TNS3|64759|tensin 3
hg19_v1_chr5_-_78281688_78281765	0.00353192	SOX2.p2	BC029051|ARSB|411|arylsulfatase B	NM_198709|ARSB|411|arylsulfatase B
hg19_v1_chr1_+_93913566_93913878	0.0035076	SOX2.p2	NM_001024948|FNBP1L|54874|formin binding protein 1-like	NM_001164473|FNBP1L|54874|formin binding protein 1-like	NM_017737|FNBP1L|54874|formin binding protein 1-like	AY514449|FNBP1L|54874|formin binding protein 1-like
hg19_v1_chr16_+_2587951_2587985	0.00350577	SOX2.p2	NM_002613|PDPK1|5170|3-phosphoinositide dependent protein kinase-1	NM_031268|PDPK1|5170|3-phosphoinositide dependent protein kinase-1
hg19_v1_chr20_-_31331196_31331311	0.0034944	SOX2.p2	AY542162|COMMD7|149951|COMM domain containing 7	BC000628|COMMD7|149951|COMM domain containing 7	AK097059|COMMD7|149951|COMM domain containing 7	AK027893|COMMD7|149951|COMM domain containing 7
hg19_v1_chr1_-_153940187_153940187	0.00348127	SOX2.p2	BC014303|SLC39A1|27173|solute carrier family 39 (zinc transporter), member 1	NM_014437|SLC39A1|27173|solute carrier family 39 (zinc transporter), member 1
hg19_v1_chr12_+_54674531_54674593	0.00346467	SOX2.p2	AK129814|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	AK303303|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	AK308679|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC070315|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC108266|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2	AK291113|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC071945|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC078165|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC073162|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC121133|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC074502|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC002355|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC033714|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC052296|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC020442|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC103707|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	X79536|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC012158|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	U00947|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1
hg19_v1_chr15_-_65282227_65282265	0.00342279	SOX2.p2	AK301362|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	NM_001127890|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	NM_016630|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg19_v1_chr15_-_50647604_50647604	0.00341535	SOX2.p2	NM_002041|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_005254|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_016654|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_016655|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_181427|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg19_v1_chr12_+_132379262_132379284	0.00341371	SOX2.p2	AF045458|ULK1|8408|unc-51-like kinase 1 (C. elegans)	NM_003565|ULK1|8408|unc-51-like kinase 1 (C. elegans)
hg19_v1_chr17_-_26697358_26697372	0.0033976	SOX2.p2	NM_000638|VTN|7448|vitronectin
hg19_v1_chr1_-_154193073_154193272	0.00339197	SOX2.p2	BC000152|C1orf43|25912|chromosome 1 open reading frame 43	AF077036|C1orf43|25912|chromosome 1 open reading frame 43	BC088353|C1orf43|25912|chromosome 1 open reading frame 43	AJ243663|C1orf43|25912|chromosome 1 open reading frame 43	BC006514|C1orf43|25912|chromosome 1 open reading frame 43	NM_001098616|C1orf43|25912|chromosome 1 open reading frame 43	NM_015449|C1orf43|25912|chromosome 1 open reading frame 43	NM_138740|C1orf43|25912|chromosome 1 open reading frame 43
hg19_v1_chr6_+_43211221_43211236	0.003387	SOX2.p2	NM_032538|TTBK1|84630|tau tubulin kinase 1
hg19_v1_chr7_+_29519485_29519485	0.00338094	SOX2.p2	NM_001039936|CHN2|1124|chimerin (chimaerin) 2
hg19_v1_chr17_+_46125675_46125723	0.003378	SOX2.p2	NM_003204|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1	BC010623|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1	AK090459|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1
hg19_v1_chr17_+_46125725_46125780	0.00336718	SOX2.p2	X77366|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1
hg19_v1_chr5_+_99871234_99871306	0.00336125	SOX2.p2	AF529367|FAM174A|345757|family with sequence similarity 174, member A
hg19_v1_chr6_+_34204690_34204721	0.0033569	SOX2.p2	BC063434|HMGA1|3159|high mobility group AT-hook 1	BC004924|HMGA1|3159|high mobility group AT-hook 1	BC008832|HMGA1|3159|high mobility group AT-hook 1	BC008963|HMGA1|3159|high mobility group AT-hook 1	BC071864|HMGA1|3159|high mobility group AT-hook 1	BC071863|HMGA1|3159|high mobility group AT-hook 1	BC067083|HMGA1|3159|high mobility group AT-hook 1
hg19_v1_chr2_-_161350304_161350330	0.00335605	SOX2.p2	BC018951|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	NM_002897|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	NM_016836|RBMS1|5937|RNA binding motif, single stranded interacting protein 1
hg19_v1_chr1_-_153643417_153643427	0.00335128	SOX2.p2	AK223326|ILF2|3608|interleukin enhancer binding factor 2, 45kDa
hg19_v1_chr18_-_29264394_29264685	0.00334121	SOX2.p2	AB024742|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC074835|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC074884|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC069620|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC069642|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AF069054|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AK314860|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AF097159|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	NM_004775|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6
hg19_v1_chr3_-_128712918_128712985	0.00332915	SOX2.p2	AK056377|KIAA1257|57501|KIAA1257	BC038736|KIAA1257|57501|KIAA1257	AB033083|KIAA1257|57501|KIAA1257	NM_020741|KIAA1257|57501|KIAA1257
hg19_v1_chr16_+_3533475_3533617	0.00332322	SOX2.p2	AK095819|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit
hg19_v1_chr22_-_17640153_17640167	0.00332176	SOX2.p2	AF273271|CECR5|27440|cat eye syndrome chromosome region, candidate 5	AK315156|CECR5|27440|cat eye syndrome chromosome region, candidate 5	AK000461|CECR5|27440|cat eye syndrome chromosome region, candidate 5
hg19_v1_chr4_+_186990308_186990350	0.00330912	SOX2.p2	BC017954|TLR3|7098|toll-like receptor 3	NM_003265|TLR3|7098|toll-like receptor 3	AK314208|TLR3|7098|toll-like receptor 3	BC068487|TLR3|7098|toll-like receptor 3	BC094737|TLR3|7098|toll-like receptor 3	BC059372|TLR3|7098|toll-like receptor 3	BC096333|TLR3|7098|toll-like receptor 3	BC096334|TLR3|7098|toll-like receptor 3	BC096335|TLR3|7098|toll-like receptor 3	DQ445682|TLR3|7098|toll-like receptor 3	U88879|TLR3|7098|toll-like receptor 3
hg19_v1_chrX_+_46696346_46696408	0.003298	SOX2.p2	NM_006915|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)	AJ007590|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)	BC027851|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)
hg19_v1_chr1_+_24286300_24286310	0.00329235	SOX2.p2	NM_017761|PNRC2|55629|proline-rich nuclear receptor coactivator 2
hg19_v1_chr6_-_33756885_33756897	0.00328636	SOX2.p2	BC051803|LEMD2|221496|LEM domain containing 2
hg19_v1_chr19_+_41699076_41699132	0.00327437	SOX2.p2	AK027605|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1	NM_030622|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1	AY358603|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1
hg19_v1_chr5_-_137854498_137854551	0.0032641	SOX2.p2	BT007374|ETF1|2107|eukaryotic translation termination factor 1	DQ890706|ETF1|2107|eukaryotic translation termination factor 1	DQ893890|ETF1|2107|eukaryotic translation termination factor 1
hg19_v1_chr20_-_10654429_10654710	0.00326405	SOX2.p2	BC126205|JAG1|182|jagged 1	BC126207|JAG1|182|jagged 1	AF028593|JAG1|182|jagged 1	U61276|JAG1|182|jagged 1	U73936|JAG1|182|jagged 1	BC098393|JAG1|182|jagged 1	BC028007|JAG1|182|jagged 1	AF003837|JAG1|182|jagged 1	NM_000214|JAG1|182|jagged 1
hg19_v1_chr2_+_70142152_70142235	0.00324365	SOX2.p2	NM_001202513|MXD1|4084|MAX dimerization protein 1	NM_001202514|MXD1|4084|MAX dimerization protein 1	NM_002357|MXD1|4084|MAX dimerization protein 1	BC098396|MXD1|4084|MAX dimerization protein 1
hg19_v1_chr13_-_52733669_52733784	0.00324355	SOX2.p2	NM_152720|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3	BC019916|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3	AK290259|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3
hg19_v1_chr10_-_116444374_116444413	0.00323696	SOX2.p2	NM_001003407|ABLIM1|3983|actin binding LIM protein 1	NM_001003408|ABLIM1|3983|actin binding LIM protein 1
hg19_v1_chr6_-_152957985_152958100	0.00323457	SOX2.p2	AF535142|SYNE1|23345|spectrin repeat containing, nuclear envelope 1	NM_033071|SYNE1|23345|spectrin repeat containing, nuclear envelope 1
hg19_v1_chr17_-_62658311_62658419	0.00322051	SOX2.p2	CR936721|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	NM_022739|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2
hg19_v1_chr1_+_166808721_166808770	0.00321574	SOX2.p2	AB040946|POGK|57645|pogo transposable element with KRAB domain	NM_017542|POGK|57645|pogo transposable element with KRAB domain	AK056711|POGK|57645|pogo transposable element with KRAB domain	BC131624|POGK|57645|pogo transposable element with KRAB domain
hg19_v1_chr19_+_40854529_40854652	0.00321446	SOX2.p2	BC036327|PLD3|23646|phospholipase D family, member 3	AK293690|PLD3|23646|phospholipase D family, member 3	BC096820|PLD3|23646|phospholipase D family, member 3
hg19_v1_chr6_-_32160289_32160441	0.00321364	SOX2.p2	AF155657|GPSM3|63940|G-protein signaling modulator 3	BC018724|GPSM3|63940|G-protein signaling modulator 3
hg19_v1_chr6_-_127840499_127840499	0.0032048	SOX2.p2	NM_001012279|C6orf174|387104|chromosome 6 open reading frame 174
hg19_v1_chr6_+_43149925_43149950	0.00319433	SOX2.p2	BC028159|CUL9|23113|cullin 9
hg19_v1_chr8_+_38244647_38244648	0.00318984	SOX2.p2	BC024250|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2	NM_001199660|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2
hg19_v1_chr20_-_60942300_60942454	0.00317808	SOX2.p2	BC015386|LAMA5|3911|laminin, alpha 5	BC085017|LAMA5|3911|laminin, alpha 5	AF443072|LAMA5|3911|laminin, alpha 5	NM_005560|LAMA5|3911|laminin, alpha 5
hg19_v1_chr5_-_58571916_58571944	0.00316367	SOX2.p2	AY245867|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	NM_001197220|PDE4D|5144|phosphodiesterase 4D, cAMP-specific
hg19_v1_chr5_+_137514753_137514878	0.00316244	SOX2.p2	AK296879|KIF20A|10112|kinesin family member 20A	AK025790|KIF20A|10112|kinesin family member 20A	AF153329|KIF20A|10112|kinesin family member 20A	BC012999|KIF20A|10112|kinesin family member 20A
hg19_v1_chr12_-_108154908_108154913	0.00315107	SOX2.p2	NM_012406|PRDM4|11108|PR domain containing 4
hg19_v1_chr17_-_982210_982240	0.00312022	SOX2.p2	AK299909|ABR|29|active BCR-related gene
hg19_v1_chr22_+_20104810_20105027	0.00311396	SOX2.p2	D38076|RANBP1|5902|RAN binding protein 1	NM_002882|RANBP1|5902|RAN binding protein 1	AK223506|RANBP1|5902|RAN binding protein 1
hg19_v1_chr9_+_97521930_97522065	0.00310962	SOX2.p2	NM_001193329|C9orf3|84909|chromosome 9 open reading frame 3	AJ560639|C9orf3|84909|chromosome 9 open reading frame 3
hg19_v1_chr4_+_30722445_30722474	0.00309231	SOX2.p2	AB006756|PCDH7|5099|protocadherin 7
hg19_v1_chr11_-_3013550_3013560	0.00309043	SOX2.p2	AK316324|NAP1L4|4676|nucleosome assembly protein 1-like 4
hg19_v1_chr15_-_48937795_48938064	0.00308912	SOX2.p2	BC146854|FBN1|2200|fibrillin 1	AK304737|FBN1|2200|fibrillin 1	BC094721|FBN1|2200|fibrillin 1	NM_000138|FBN1|2200|fibrillin 1	X63556|FBN1|2200|fibrillin 1
hg19_v1_chr12_-_51477138_51477234	0.0030856	SOX2.p2	BC017221|CSRNP2|81566|cysteine-serine-rich nuclear protein 2	AK313080|CSRNP2|81566|cysteine-serine-rich nuclear protein 2
hg19_v1_chr1_-_1167273_1167346	0.00306504	SOX2.p2	BC011244|SDF4|51150|stromal cell derived factor 4	AK299810|SDF4|51150|stromal cell derived factor 4	BC006211|SDF4|51150|stromal cell derived factor 4	BC008917|SDF4|51150|stromal cell derived factor 4
hg19_v1_chrX_+_18709044_18709045	0.00304697	SOX2.p2	NM_006240|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	NM_152224|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	NM_152226|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	X97867|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	AK292235|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	BC036026|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1
hg19_v1_chr10_-_32635842_32636083	0.00304036	SOX2.p2	AK092304|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)	AK309822|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)
hg19_v1_chr15_-_65281771_65281847	0.00303819	SOX2.p2	AF212231|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	NM_001127889|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg19_v1_chr16_+_30418576_30418734	0.00301542	SOX2.p2	AK313930|ZNF771|51333|zinc finger protein 771	NM_001142305|ZNF771|51333|zinc finger protein 771	NM_016643|ZNF771|51333|zinc finger protein 771
hg19_v1_chr2_-_219157207_219157303	0.00300023	SOX2.p2	AF193045|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	BC007980|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK300597|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK298123|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	BC026348|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK130713|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK298500|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	BC026693|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK130380|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	BC013428|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	NM_022152|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1
hg19_v1_chr1_-_153643428_153643432	0.00299104	SOX2.p2	BC000382|ILF2|3608|interleukin enhancer binding factor 2, 45kDa
hg19_v1_chr7_-_2595327_2595404	0.00299021	SOX2.p2	AK131083|BRAT1|221927|BRCA1-associated ATM activator 1	NM_152743|BRAT1|221927|BRCA1-associated ATM activator 1
hg19_v1_chr11_-_59383167_59383172	0.00296771	SOX2.p2	BC051350|OSBP|5007|oxysterol binding protein	BC063121|OSBP|5007|oxysterol binding protein
hg19_v1_chr1_+_43148098_43148102	0.00293509	SOX2.p2	BC070084|YBX1|4904|Y box binding protein 1
hg19_v1_chr17_+_59477473_59477519	0.00293238	SOX2.p2	U28049|TBX2|6909|T-box 2
hg19_v1_chr19_-_58662144_58662153	0.00293186	SOX2.p2	BC047501|ZNF329|79673|zinc finger protein 329	NM_024620|ZNF329|79673|zinc finger protein 329	AK095349|ZNF329|79673|zinc finger protein 329	AK096542|ZNF329|79673|zinc finger protein 329
hg19_v1_chr4_+_170581212_170581298	0.00292737	SOX2.p2	AK127483|CLCN3|1182|chloride channel 3	NM_001243374|CLCN3|1182|chloride channel 3
hg19_v1_chr20_-_3996035_3996295	0.00291576	SOX2.p2	AL096778|RNF24|11237|ring finger protein 24	NM_007219|RNF24|11237|ring finger protein 24	BC039584|RNF24|11237|ring finger protein 24	BC000213|RNF24|11237|ring finger protein 24	NM_001134337|RNF24|11237|ring finger protein 24	NM_001134338|RNF24|11237|ring finger protein 24
hg19_v1_chr1_-_101360245_101360290	0.00290352	SOX2.p2	BC014910|EXTL2|2135|exostoses (multiple)-like 2
hg19_v1_chr16_+_2588021_2588049	0.00290328	SOX2.p2	AK131060|PDPK1|5170|3-phosphoinositide dependent protein kinase-1	AK222581|PDPK1|5170|3-phosphoinositide dependent protein kinase-1	AK293900|PDPK1|5170|3-phosphoinositide dependent protein kinase-1	AF017995|PDPK1|5170|3-phosphoinositide dependent protein kinase-1	Y15056|PDPK1|5170|3-phosphoinositide dependent protein kinase-1
hg19_v1_chr3_+_39448179_39448241	0.00289694	SOX2.p2	BC070263|RPSA|3921|ribosomal protein SA	NM_002295|RPSA|3921|ribosomal protein SA	BC066941|RPSA|3921|ribosomal protein SA	BC107567|RPSA|3921|ribosomal protein SA	BC005391|RPSA|3921|ribosomal protein SA	BC062714|RPSA|3921|ribosomal protein SA	AF503367|RPSA|3921|ribosomal protein SA	BC013827|RPSA|3921|ribosomal protein SA	BC050688|RPSA|3921|ribosomal protein SA	X15005|RPSA|3921|ribosomal protein SA	BC034537|RPSA|3921|ribosomal protein SA	BC053370|RPSA|3921|ribosomal protein SA	BC071968|RPSA|3921|ribosomal protein SA	BC010418|RPSA|3921|ribosomal protein SA	BC071693|RPSA|3921|ribosomal protein SA	BC018867|RPSA|3921|ribosomal protein SA	BC071969|RPSA|3921|ribosomal protein SA	BC073863|RPSA|3921|ribosomal protein SA
hg19_v1_chr11_+_13690230_13690244	0.00289016	SOX2.p2	CR936619|FAR1|84188|fatty acyl CoA reductase 1
hg19_v1_chr12_+_94071150_94071217	0.00288805	SOX2.p2	NM_003805|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain	AK296225|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain	AK314861|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain	U79115|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain	BC017042|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain	U84388|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain
hg19_v1_chr17_-_74099603_74099845	0.00288179	SOX2.p2	AK295871|EXOC7|23265|exocyst complex component 7	FJ457119|EXOC7|23265|exocyst complex component 7	FJ457120|EXOC7|23265|exocyst complex component 7	AK023832|EXOC7|23265|exocyst complex component 7	BC018466|EXOC7|23265|exocyst complex component 7	AB028990|EXOC7|23265|exocyst complex component 7	BC011045|EXOC7|23265|exocyst complex component 7	AK128278|EXOC7|23265|exocyst complex component 7	BC029432|EXOC7|23265|exocyst complex component 7	AK022397|EXOC7|23265|exocyst complex component 7	AL834324|EXOC7|23265|exocyst complex component 7
hg19_v1_chr2_-_128615673_128615690	0.00287828	SOX2.p2	
hg19_v1_chr5_-_43603103_43603285	0.00287687	SOX2.p2	
hg19_v1_chr15_-_50647385_50647400	0.00287584	SOX2.p2	D13317|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	AK301350|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	BC036080|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg19_v1_chr6_+_170615780_170615836	0.00286715	SOX2.p2	DQ873695|FAM120B|84498|family with sequence similarity 120B	AK056435|FAM120B|84498|family with sequence similarity 120B
hg19_v1_chr2_+_201676644_201676648	0.002865	SOX2.p2	D13630|BZW1|9689|basic leucine zipper and W2 domains 1	BC001804|BZW1|9689|basic leucine zipper and W2 domains 1
hg19_v1_chr14_-_61191027_61191088	0.00285683	SOX2.p2	AK309358|SIX4|51804|SIX homeobox 4
hg19_v1_chr11_-_129817300_129817516	0.00285279	SOX2.p2	AB033057|PRDM10|56980|PR domain containing 10	BC117415|PRDM10|56980|PR domain containing 10	BC143612|PRDM10|56980|PR domain containing 10	BC143613|PRDM10|56980|PR domain containing 10	AF503171|PRDM10|56980|PR domain containing 10	AF275817|PRDM10|56980|PR domain containing 10	NM_199438|PRDM10|56980|PR domain containing 10	NM_199439|PRDM10|56980|PR domain containing 10
hg19_v1_chr16_+_57496574_57496636	0.00284683	SOX2.p2	BC003159|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AK300124|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AK293112|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	BC028157|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AJ224143|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AJ224144|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	J05448|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	BC000409|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AF008443|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	CR542041|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	DQ891411|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	DQ894586|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	EU176305|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa
hg19_v1_chr1_+_43148105_43148125	0.00284601	SOX2.p2	BC098435|YBX1|4904|Y box binding protein 1	Z70765|YBX1|4904|Y box binding protein 1	BC106045|YBX1|4904|Y box binding protein 1	J03827|YBX1|4904|Y box binding protein 1	BC065571|YBX1|4904|Y box binding protein 1	BC071708|YBX1|4904|Y box binding protein 1	BC072014|YBX1|4904|Y box binding protein 1	BC090038|YBX1|4904|Y box binding protein 1	BC038384|YBX1|4904|Y box binding protein 1	BC000064|YBX1|4904|Y box binding protein 1	BC010430|YBX1|4904|Y box binding protein 1	BC002411|YBX1|4904|Y box binding protein 1	M24070|YBX1|4904|Y box binding protein 1
hg19_v1_chr6_+_34204663_34204679	0.00284282	SOX2.p2	X14957|HMGA1|3159|high mobility group AT-hook 1	X14958|HMGA1|3159|high mobility group AT-hook 1	AK308245|HMGA1|3159|high mobility group AT-hook 1
hg19_v1_chr2_-_74781061_74781087	0.00283903	SOX2.p2	AF311313|LOXL3|84695|lysyl oxidase-like 3	NM_032603|LOXL3|84695|lysyl oxidase-like 3	AF284815|LOXL3|84695|lysyl oxidase-like 3	AF282619|LOXL3|84695|lysyl oxidase-like 3	AK309474|LOXL3|84695|lysyl oxidase-like 3
hg19_v1_chr10_+_97803064_97803699	0.00283787	SOX2.p2	BC043175|CCNJ|54619|cyclin J	NM_001134375|CCNJ|54619|cyclin J	NM_001134376|CCNJ|54619|cyclin J	NM_019084|CCNJ|54619|cyclin J	AK092360|CCNJ|54619|cyclin J	AK297264|CCNJ|54619|cyclin J
hg19_v1_chr3_-_169482847_169482849	0.00283671	SOX2.p2	BC128029|TERC|7012|telomerase RNA component
hg19_v1_chr1_+_16767166_16767203	0.00283584	SOX2.p2	NM_001145277|NECAP2|55707|NECAP endocytosis associated 2	NM_001145278|NECAP2|55707|NECAP endocytosis associated 2	NM_018090|NECAP2|55707|NECAP endocytosis associated 2
hg19_v1_chr6_+_134274247_134274443	0.00282717	SOX2.p2	NM_004865|TBPL1|9519|TBP-like 1	AK313645|TBPL1|9519|TBP-like 1	BC000381|TBPL1|9519|TBP-like 1	AF136570|TBPL1|9519|TBP-like 1	AF130312|TBPL1|9519|TBP-like 1	AB020881|TBPL1|9519|TBP-like 1	BC017559|TBPL1|9519|TBP-like 1
hg19_v1_chr1_-_200379165_200379223	0.00282422	SOX2.p2	BC060820|ZNF281|23528|zinc finger protein 281	NM_012482|ZNF281|23528|zinc finger protein 281	AK027284|ZNF281|23528|zinc finger protein 281
hg19_v1_chr2_+_27440342_27440417	0.00282301	SOX2.p2	D78586|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
hg19_v1_chr9_-_35072643_35072738	0.00281493	SOX2.p2	NM_007126|VCP|7415|valosin containing protein
hg19_v1_chr7_-_82792127_82792345	0.00280049	SOX2.p2	NM_014510|PCLO|27445|piccolo (presynaptic cytomatrix protein)	NM_033026|PCLO|27445|piccolo (presynaptic cytomatrix protein)	AK297315|PCLO|27445|piccolo (presynaptic cytomatrix protein)
hg19_v1_chr6_+_34204928_34204935	0.002799	SOX2.p2	M23614|HMGA1|3159|high mobility group AT-hook 1	M23615|HMGA1|3159|high mobility group AT-hook 1
hg19_v1_chr12_+_6898673_6898695	0.002797	SOX2.p2	AK316461|CD4|920|CD4 molecule
hg19_v1_chr15_-_34610928_34611028	0.00278703	SOX2.p2	BC126241|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6	BC126243|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6	AF108831|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6	AK315283|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6	NM_005135|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6
hg19_v1_chr20_-_45035253_45035346	0.00278433	SOX2.p2	AK299318|ELMO2|63916|engulfment and cell motility 2	AL833406|ELMO2|63916|engulfment and cell motility 2	BX648819|ELMO2|63916|engulfment and cell motility 2	NM_133171|ELMO2|63916|engulfment and cell motility 2	NM_182764|ELMO2|63916|engulfment and cell motility 2
hg19_v1_chr11_+_64889802_64889814	0.00277869	SOX2.p2	U39400|MRPL49|740|mitochondrial ribosomal protein L49	BC004378|MRPL49|740|mitochondrial ribosomal protein L49	AB062395|MRPL49|740|mitochondrial ribosomal protein L49
hg19_v1_chr22_-_17640076_17640152	0.00277106	SOX2.p2	AK001034|CECR5|27440|cat eye syndrome chromosome region, candidate 5	BC042540|CECR5|27440|cat eye syndrome chromosome region, candidate 5
hg19_v1_chr13_-_72440143_72440375	0.00276246	SOX2.p2	AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)	BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)	AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)
hg19_v1_chr1_-_200377488_200377589	0.00275688	SOX2.p2	AK022921|ZNF281|23528|zinc finger protein 281
hg19_v1_chr15_-_99791399_99791434	0.00275425	SOX2.p2	AK023230|TTC23|64927|tetratricopeptide repeat domain 23	AK291690|TTC23|64927|tetratricopeptide repeat domain 23
hg19_v1_chr11_-_59383179_59383242	0.00275284	SOX2.p2	BC011581|OSBP|5007|oxysterol binding protein
hg19_v1_chr4_+_30722191_30722198	0.00275031	SOX2.p2	AB006757|PCDH7|5099|protocadherin 7
hg19_v1_chr11_+_112047088_112047122	0.00274699	SOX2.p2	NM_001037290|BCO2|83875|beta-carotene oxygenase 2	AK027801|BCO2|83875|beta-carotene oxygenase 2	AK297853|BCO2|83875|beta-carotene oxygenase 2	AB096252|BCO2|83875|beta-carotene oxygenase 2
hg19_v1_chr6_+_32939371_32939371	0.00273037	SOX2.p2	NM_001199455|BRD2|6046|bromodomain containing 2
hg19_v1_chrX_-_132092224_132092289	0.00272983	SOX2.p2	AK075402|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2	BC094718|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2
hg19_v1_chrX_-_24665225_24665425	0.00272648	SOX2.p2	AF148464|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AF052510|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg19_v1_chr3_+_138067444_138067579	0.00270776	SOX2.p2	NM_001085049|MRAS|22808|muscle RAS oncogene homolog	NM_001252093|MRAS|22808|muscle RAS oncogene homolog	BC047690|MRAS|22808|muscle RAS oncogene homolog	AF043938|MRAS|22808|muscle RAS oncogene homolog
hg19_v1_chr1_-_21113758_21113796	0.00269472	SOX2.p2	BC046170|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg19_v1_chr16_+_57496548_57496568	0.0026929	SOX2.p2	NM_032940|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa
hg19_v1_chr1_-_206785694_206785817	0.00266782	SOX2.p2	DQ891590|EIF2D|1939|eukaryotic translation initiation factor 2D	DQ894784|EIF2D|1939|eukaryotic translation initiation factor 2D	BC039134|EIF2D|1939|eukaryotic translation initiation factor 2D	BC058905|EIF2D|1939|eukaryotic translation initiation factor 2D	AK225259|EIF2D|1939|eukaryotic translation initiation factor 2D	BC001585|EIF2D|1939|eukaryotic translation initiation factor 2D	AF220417|EIF2D|1939|eukaryotic translation initiation factor 2D	AF262403|EIF2D|1939|eukaryotic translation initiation factor 2D	AK294536|EIF2D|1939|eukaryotic translation initiation factor 2D	AK001852|EIF2D|1939|eukaryotic translation initiation factor 2D
hg19_v1_chr4_+_170541728_170541987	0.00266191	SOX2.p2	AK304362|CLCN3|1182|chloride channel 3	BC054877|CLCN3|1182|chloride channel 3	BC026256|CLCN3|1182|chloride channel 3	BC136510|CLCN3|1182|chloride channel 3
hg19_v1_chr10_-_73848278_73848286	0.00265764	SOX2.p2	AY358921|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2
hg19_v1_chr15_+_69745156_69745287	0.00265314	SOX2.p2	NM_001003|RPLP1|6176|ribosomal protein, large, P1	NM_213725|RPLP1|6176|ribosomal protein, large, P1	AK130958|RPLP1|6176|ribosomal protein, large, P1	AK026579|RPLP1|6176|ribosomal protein, large, P1	D28366|RPLP1|6176|ribosomal protein, large, P1	M17886|RPLP1|6176|ribosomal protein, large, P1	AY303789|RPLP1|6176|ribosomal protein, large, P1	BC003369|RPLP1|6176|ribosomal protein, large, P1	BC007590|RPLP1|6176|ribosomal protein, large, P1	CR450339|RPLP1|6176|ribosomal protein, large, P1	CR542209|RPLP1|6176|ribosomal protein, large, P1
hg19_v1_chr2_+_27440233_27440275	0.00264826	SOX2.p2	BC065510|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase	NM_004341|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase	AK226105|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
hg19_v1_chr17_+_46125724_46125724	0.00264732	SOX2.p2	AL833530|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1
hg19_v1_chr1_-_33502464_33502469	0.00263596	SOX2.p2	AB005621|AK2|204|adenylate kinase 2
hg19_v1_chr17_-_31204071_31204176	0.00263538	SOX2.p2	AK127942|MYO1D|4642|myosin ID
hg19_v1_chr1_-_153643456_153643471	0.00263252	SOX2.p2	AK313364|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	AK310615|ILF2|3608|interleukin enhancer binding factor 2, 45kDa
hg19_v1_chr3_-_183145854_183146025	0.00263251	SOX2.p2	NM_015078|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2	BC064632|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2	AK124500|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2	AK310962|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2
hg19_v1_chr14_+_55168831_55168947	0.0026188	SOX2.p2	AB028976|SAMD4A|23034|sterile alpha motif domain containing 4A
hg19_v1_chr17_+_40925443_40925466	0.00261336	SOX2.p2	BC006282|VPS25|84313|vacuolar protein sorting 25 homolog (S. cerevisiae)	NM_032353|VPS25|84313|vacuolar protein sorting 25 homolog (S. cerevisiae)	AK312092|VPS25|84313|vacuolar protein sorting 25 homolog (S. cerevisiae)
hg19_v1_chr4_+_1723233_1723303	0.00261251	SOX2.p2	AK302463|TACC3|10460|transforming, acidic coiled-coil containing protein 3	AK225631|TACC3|10460|transforming, acidic coiled-coil containing protein 3	BC106071|TACC3|10460|transforming, acidic coiled-coil containing protein 3	AF093543|TACC3|10460|transforming, acidic coiled-coil containing protein 3	AF479620|TACC3|10460|transforming, acidic coiled-coil containing protein 3	AJ243997|TACC3|10460|transforming, acidic coiled-coil containing protein 3	BC111771|TACC3|10460|transforming, acidic coiled-coil containing protein 3
hg19_v1_chr4_+_71859391_71859552	0.00261052	SOX2.p2	M60527|DCK|1633|deoxycytidine kinase	BC114617|DCK|1633|deoxycytidine kinase	JF806429|DCK|1633|deoxycytidine kinase	BT019941|DCK|1633|deoxycytidine kinase	BT019942|DCK|1633|deoxycytidine kinase	CR536527|DCK|1633|deoxycytidine kinase	CR541876|DCK|1633|deoxycytidine kinase
hg19_v1_chr6_-_31509769_31509832	0.00260099	SOX2.p2	AK127767|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AK294939|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AK298194|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AK316469|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AK295854|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AB209217|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
hg19_v1_chr14_-_88737160_88737273	0.00258533	SOX2.p2	EU978940|KCNK10|54207|potassium channel, subfamily K, member 10	EU978941|KCNK10|54207|potassium channel, subfamily K, member 10	BC075022|KCNK10|54207|potassium channel, subfamily K, member 10	BC075021|KCNK10|54207|potassium channel, subfamily K, member 10	AF385399|KCNK10|54207|potassium channel, subfamily K, member 10	NM_138318|KCNK10|54207|potassium channel, subfamily K, member 10
hg19_v1_chr3_+_100053544_100053671	0.002574	SOX2.p2	NM_020202|NIT2|56954|nitrilase family, member 2	AF260334|NIT2|56954|nitrilase family, member 2	BC107890|NIT2|56954|nitrilase family, member 2	AK225979|NIT2|56954|nitrilase family, member 2	AK294010|NIT2|56954|nitrilase family, member 2	BC020620|NIT2|56954|nitrilase family, member 2	AF284574|NIT2|56954|nitrilase family, member 2	AK313704|NIT2|56954|nitrilase family, member 2
hg19_v1_chr8_-_145027975_145028087	0.00256844	SOX2.p2	AY480046|PLEC|5339|plectin	NM_201379|PLEC|5339|plectin
hg19_v1_chr2_+_183580960_183581189	0.00256713	SOX2.p2	AL832632|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AK027647|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	NM_018981|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AY358577|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AF490904|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AK027696|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	BC070034|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	BC117299|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	BC126168|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AF038503|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10
hg19_v1_chr13_+_113656027_113656042	0.00255868	SOX2.p2	NM_024979|MCF2L|23263|MCF.2 cell line derived transforming sequence-like	AK295047|MCF2L|23263|MCF.2 cell line derived transforming sequence-like
hg19_v1_chr18_-_52625278_52625278	0.00255677	SOX2.p2	AK058097|CCDC68|80323|coiled-coil domain containing 68	NM_001143829|CCDC68|80323|coiled-coil domain containing 68
hg19_v1_chr1_-_23694497_23694900	0.00253654	SOX2.p2	EU446536|ZNF436|80818|zinc finger protein 436	AK308173|ZNF436|80818|zinc finger protein 436	BC056400|ZNF436|80818|zinc finger protein 436	AK092364|ZNF436|80818|zinc finger protein 436	AL834485|ZNF436|80818|zinc finger protein 436	NM_030634|ZNF436|80818|zinc finger protein 436
hg19_v1_chr20_+_30467596_30467631	0.00253589	SOX2.p2	BC036213|TTLL9|164395|tubulin tyrosine ligase-like family, member 9	AK303963|TTLL9|164395|tubulin tyrosine ligase-like family, member 9	AK302360|TTLL9|164395|tubulin tyrosine ligase-like family, member 9	AK302806|TTLL9|164395|tubulin tyrosine ligase-like family, member 9
hg19_v1_chr5_-_176739291_176739291	0.00253484	SOX2.p2	NM_001142935|MXD3|83463|MAX dimerization protein 3	NM_031300|MXD3|83463|MAX dimerization protein 3
hg19_v1_chr5_+_78532338_78532471	0.00253453	SOX2.p2	
hg19_v1_chr7_+_73498106_73498146	0.00252119	SOX2.p2	AK290162|LIMK1|3984|LIM domain kinase 1	NM_002314|LIMK1|3984|LIM domain kinase 1
hg19_v1_chr1_+_205236591_205236677	0.00250871	SOX2.p2	AY358192|TMCC2|9911|transmembrane and coiled-coil domain family 2
hg19_v1_chr1_-_156722023_156722239	0.00250781	SOX2.p2	NM_001126051|HDGF|3068|hepatoma-derived growth factor	AK096411|HDGF|3068|hepatoma-derived growth factor	AK304468|HDGF|3068|hepatoma-derived growth factor	NM_001126050|HDGF|3068|hepatoma-derived growth factor
hg19_v1_chr16_-_69788798_69788848	0.0025058	SOX2.p2	AF190161|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	BC064630|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	AK314307|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	AK001028|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	AB026125|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	NM_014062|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	AY487344|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)
hg19_v1_chr3_-_47555079_47555206	0.00250073	SOX2.p2	DQ787088|C3orf75|54859|chromosome 3 open reading frame 75	BC000623|C3orf75|54859|chromosome 3 open reading frame 75	BC014204|C3orf75|54859|chromosome 3 open reading frame 75	AK225721|C3orf75|54859|chromosome 3 open reading frame 75	AK000218|C3orf75|54859|chromosome 3 open reading frame 75	AK298202|C3orf75|54859|chromosome 3 open reading frame 75	NM_001031703|C3orf75|54859|chromosome 3 open reading frame 75
hg19_v1_chr3_+_3841079_3841120	0.00249739	SOX2.p2	NM_020873|LRRN1|57633|leucine rich repeat neuronal 1
hg19_v1_chr6_-_33168448_33168450	0.00249358	SOX2.p2	AK300402|RXRB|6257|retinoid X receptor, beta
hg19_v1_chr18_-_74728677_74728836	0.00249179	SOX2.p2	AK074315|MBP|4155|myelin basic protein
hg19_v1_chr6_+_111135823_111135843	0.00248674	SOX2.p2	AK304351|AMD1|262|adenosylmethionine decarboxylase 1
hg19_v1_chr1_+_204839977_204839989	0.00248536	SOX2.p2	AK308686|NFASC|23114|neurofascin
hg19_v1_chr1_+_28844762_28844803	0.00248394	SOX2.p2	BC069198|RCC1|1104|regulator of chromosome condensation 1
hg19_v1_chr2_+_231729638_231729653	0.0024672	SOX2.p2	AK075361|ITM2C|81618|integral membrane protein 2C	AK090975|ITM2C|81618|integral membrane protein 2C	AK303199|ITM2C|81618|integral membrane protein 2C
hg19_v1_chr5_+_137673956_137674010	0.00245306	SOX2.p2	BC000259|FAM53C|51307|family with sequence similarity 53, member C	AF251040|FAM53C|51307|family with sequence similarity 53, member C
hg19_v1_chr16_+_524843_524856	0.00244895	SOX2.p2	AK303061|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)	NM_001142272|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)
hg19_v1_chr19_+_13135368_13135427	0.00244859	SOX2.p2	BX537794|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)	AK295290|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)
hg19_v1_chr2_+_231729701_231729743	0.00244089	SOX2.p2	AY049777|ITM2C|81618|integral membrane protein 2C	EU831609|ITM2C|81618|integral membrane protein 2C	EU831632|ITM2C|81618|integral membrane protein 2C	EU831696|ITM2C|81618|integral membrane protein 2C	EU832488|ITM2C|81618|integral membrane protein 2C	EU832568|ITM2C|81618|integral membrane protein 2C	AB003629|ITM2C|81618|integral membrane protein 2C	CR457208|ITM2C|81618|integral membrane protein 2C
hg19_v1_chr18_-_78005230_78005488	0.00243857	SOX2.p2	AB044556|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)	AB178535|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)	AB178536|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)	BC060797|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)	NM_032510|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)
hg19_v1_chr22_-_17640168_17640190	0.00242513	SOX2.p2	NM_033070|CECR5|27440|cat eye syndrome chromosome region, candidate 5
hg19_v1_chr1_+_151227237_151227258	0.0024171	SOX2.p2	AB033605|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	BC002365|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4
hg19_v1_chrM_+_6138_7079	0.00241336	SOX2.p2	
hg19_v1_chr1_+_28844647_28844759	0.00240474	SOX2.p2	X12654|RCC1|1104|regulator of chromosome condensation 1	NM_001048194|RCC1|1104|regulator of chromosome condensation 1	NM_001048195|RCC1|1104|regulator of chromosome condensation 1	NM_001269|RCC1|1104|regulator of chromosome condensation 1
hg19_v1_chr15_+_44084039_44084399	0.00240472	SOX2.p2	BC008214|SERF2|10169|small EDRK-rich factor 2	NM_001018108|SERF2|10169|small EDRK-rich factor 2	NM_001199875|SERF2|10169|small EDRK-rich factor 2	NM_001199876|SERF2|10169|small EDRK-rich factor 2
hg19_v1_chr14_-_21994342_21994483	0.00239842	SOX2.p2	AK294051|SALL2|6297|sal-like 2 (Drosophila)	BC024245|SALL2|6297|sal-like 2 (Drosophila)	AK296414|SALL2|6297|sal-like 2 (Drosophila)	BC090958|SALL2|6297|sal-like 2 (Drosophila)	AK289358|SALL2|6297|sal-like 2 (Drosophila)
hg19_v1_chr4_-_39979549_39979637	0.00239224	SOX2.p2	BC041361|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	NM_001100399|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	NM_001100400|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	AB621803|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
hg19_v1_chr16_+_14927586_14927700	0.00236512	SOX2.p2	NM_014287|NOMO1|23420|NODAL modulator 1	BC065535|NOMO1|23420|NODAL modulator 1
hg19_v1_chr13_-_76055872_76056805	0.0023354	SOX2.p2	AB449885|TBC1D4|9882|TBC1 domain family, member 4	FM207106|TBC1D4|9882|TBC1 domain family, member 4	FM207107|TBC1D4|9882|TBC1 domain family, member 4	BC151239|TBC1D4|9882|TBC1 domain family, member 4	AB011175|TBC1D4|9882|TBC1 domain family, member 4	NM_014832|TBC1D4|9882|TBC1 domain family, member 4	AK307493|TBC1D4|9882|TBC1 domain family, member 4
hg19_v1_chr6_-_13711952_13711996	0.00232996	SOX2.p2	BC052781|RANBP9|10048|RAN binding protein 9
hg19_v1_chr13_-_45150601_45150700	0.0023215	SOX2.p2	AB082525|TSC22D1|8848|TSC22 domain family, member 1	NM_001243799|TSC22D1|8848|TSC22 domain family, member 1	NM_183422|TSC22D1|8848|TSC22 domain family, member 1
hg19_v1_chrX_+_47092264_47092361	0.00231468	SOX2.p2	BC140849|USP11|8237|ubiquitin specific peptidase 11	NM_004651|USP11|8237|ubiquitin specific peptidase 11
hg19_v1_chrX_+_77166178_77166208	0.00231122	SOX2.p2	NM_000052|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide	L06133|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide
hg19_v1_chrX_-_128788913_128788932	0.00228676	SOX2.p2	BC021104|APLN|8862|apelin	NM_017413|APLN|8862|apelin
hg19_v1_chr15_+_38746303_38746387	0.00228241	SOX2.p2	NM_001042429|FAM98B|283742|family with sequence similarity 98, member B	NM_173611|FAM98B|283742|family with sequence similarity 98, member B	AK095745|FAM98B|283742|family with sequence similarity 98, member B	BC093898|FAM98B|283742|family with sequence similarity 98, member B
hg19_v1_chr18_+_56530060_56530179	0.00228	SOX2.p2	NM_018181|ZNF532|55205|zinc finger protein 532	AF295077|ZNF532|55205|zinc finger protein 532	BC130618|ZNF532|55205|zinc finger protein 532	BC130620|ZNF532|55205|zinc finger protein 532
hg19_v1_chr5_+_72112417_72112564	0.00227694	SOX2.p2	NM_002270|TNPO1|3842|transportin 1	AK299671|TNPO1|3842|transportin 1	U70322|TNPO1|3842|transportin 1	AK301021|TNPO1|3842|transportin 1	AK308177|TNPO1|3842|transportin 1	BC040340|TNPO1|3842|transportin 1
hg19_v1_chr9_-_140484899_140484965	0.00226735	SOX2.p2	BC012948|ZMYND19|116225|zinc finger, MYND-type containing 19	AJ298882|ZMYND19|116225|zinc finger, MYND-type containing 19	AX766496|ZMYND19|116225|zinc finger, MYND-type containing 19	NM_138462|ZMYND19|116225|zinc finger, MYND-type containing 19
hg19_v1_chr17_-_62914902_62914902	0.00226651	SOX2.p2	AB011135|LRRC37A3|374819|leucine rich repeat containing 37, member A3	NM_199340|LRRC37A3|374819|leucine rich repeat containing 37, member A3
hg19_v1_chr1_+_29063132_29063435	0.0022646	SOX2.p2	NM_001173128|YTHDF2|51441|YTH domain family, member 2	NM_016258|YTHDF2|51441|YTH domain family, member 2	BC002559|YTHDF2|51441|YTH domain family, member 2	AK292581|YTHDF2|51441|YTH domain family, member 2
hg19_v1_chr1_+_87794576_87794787	0.00225414	SOX2.p2	BC017673|LMO4|8543|LIM domain only 4	BC003600|LMO4|8543|LIM domain only 4
hg19_v1_chr1_-_1623942_1623988	0.00224932	SOX2.p2	CR936618|SLC35E2B|728661|solute carrier family 35, member E2B	BC062371|SLC35E2|9906|solute carrier family 35, member E2
hg19_v1_chr18_-_22930826_22931470	0.00219868	SOX2.p2	
hg19_v1_chr5_+_140254930_140255057	0.00219373	SOX2.p2	NM_018903|PCDHA12|56137|protocadherin alpha 12	NM_031864|PCDHA12|56137|protocadherin alpha 12	BC112280|PCDHA12|56137|protocadherin alpha 12	BC113372|PCDHA12|56137|protocadherin alpha 12	AF152308|PCDHA12|56137|protocadherin alpha 12	AF152477|PCDHA12|56137|protocadherin alpha 12	HQ258507|PCDHA12|56137|protocadherin alpha 12
hg19_v1_chrX_-_48693934_48694057	0.00218645	SOX2.p2	DQ893525|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor	BC002851|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor	AF181562|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor	NM_013271|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor	BC094731|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor
hg19_v1_chr21_+_45177862_45178006	0.00217127	SOX2.p2	AL110184|PDXK|8566|pyridoxal (pyridoxine, vitamin B6) kinase
hg19_v1_chr19_+_19303732_19303772	0.00216581	SOX2.p2	AF105427|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein	AF077196|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein	AF105428|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein
hg19_v1_chr3_+_14989076_14989235	0.00215618	SOX2.p2	AK290590|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2	L27586|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2	NM_003298|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2
hg19_v1_chr11_-_118661855_118661855	0.00214538	SOX2.p2	BC039826|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg19_v1_chr7_-_23053732_23053769	0.00214048	SOX2.p2	BC018710|FAM126A|84668|family with sequence similarity 126, member A	NM_032581|FAM126A|84668|family with sequence similarity 126, member A
hg19_v1_chr4_+_48343338_48343485	0.00213934	SOX2.p2	BC040993|SLAIN2|57606|SLAIN motif family, member 2	AK291006|SLAIN2|57606|SLAIN motif family, member 2
hg19_v1_chr16_-_15736964_15737022	0.00213828	SOX2.p2	BC137165|KIAA0430|9665|KIAA0430	BC137170|KIAA0430|9665|KIAA0430	BC144514|KIAA0430|9665|KIAA0430	BC144515|KIAA0430|9665|KIAA0430	AK302667|KIAA0430|9665|KIAA0430	AK095840|KIAA0430|9665|KIAA0430	BC064914|KIAA0430|9665|KIAA0430	NM_001184998|KIAA0430|9665|KIAA0430	NM_001184999|KIAA0430|9665|KIAA0430	NM_014647|KIAA0430|9665|KIAA0430
hg19_v1_chr9_+_109625347_109625381	0.00213519	SOX2.p2	BX648965|ZNF462|58499|zinc finger protein 462	NM_021224|ZNF462|58499|zinc finger protein 462	AK127803|ZNF462|58499|zinc finger protein 462
hg19_v1_chr15_+_85923739_85924043	0.0021059	SOX2.p2	AK125331|AKAP13|11214|A kinase (PRKA) anchor protein 13	BC050312|AKAP13|11214|A kinase (PRKA) anchor protein 13	NM_006738|AKAP13|11214|A kinase (PRKA) anchor protein 13	NM_007200|AKAP13|11214|A kinase (PRKA) anchor protein 13	AF406992|AKAP13|11214|A kinase (PRKA) anchor protein 13
hg19_v1_chr5_-_40835283_40835323	0.00209404	SOX2.p2	BC079477|RPL37|6167|ribosomal protein L37	D23661|RPL37|6167|ribosomal protein L37	AB055770|RPL37|6167|ribosomal protein L37	AK124098|SNORD72|619564|small nucleolar RNA, C/D box 72	BC067790|RPL37|6167|ribosomal protein L37	BX647123|RPL37|6167|ribosomal protein L37
hg19_v1_chr5_-_142000899_142000906	0.00209182	SOX2.p2	L01487|FGF1|2246|fibroblast growth factor 1 (acidic)	BC032697|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_001144892|FGF1|2246|fibroblast growth factor 1 (acidic)
hg19_v1_chr1_+_87170515_87170594	0.00208491	SOX2.p2	BC007455|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	AF151819|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	AF257318|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	AF263293|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	DQ893029|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	DQ896273|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1
hg19_v1_chr16_+_1203240_1203412	0.00208306	SOX2.p2	AF073931|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit	NM_001005407|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit	NM_021098|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit	AF051946|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit
hg19_v1_chr14_+_42076763_42076772	0.00208175	SOX2.p2	NM_152447|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5	AK096627|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5
hg19_v1_chr1_+_170501240_170501366	0.00207762	SOX2.p2	AK308339|GORAB|92344|golgin, RAB6-interacting	NM_001146039|GORAB|92344|golgin, RAB6-interacting	NM_152281|GORAB|92344|golgin, RAB6-interacting	AK021814|GORAB|92344|golgin, RAB6-interacting	BC064945|GORAB|92344|golgin, RAB6-interacting	BC047476|GORAB|92344|golgin, RAB6-interacting	AK057661|GORAB|92344|golgin, RAB6-interacting
hg19_v1_chr16_+_30406711_30406771	0.00207341	SOX2.p2	NM_152652|ZNF48|197407|zinc finger protein 48
hg19_v1_chr3_+_142342265_142342343	0.00207322	SOX2.p2	NM_002670|PLS1|5357|plastin 1	L20826|PLS1|5357|plastin 1
hg19_v1_chr6_+_131894343_131894422	0.00207208	SOX2.p2	NM_000045|ARG1|383|arginase, liver	NM_001244438|ARG1|383|arginase, liver	AY074488|ARG1|383|arginase, liver	BC005321|ARG1|383|arginase, liver	M14502|ARG1|383|arginase, liver	BC020653|ARG1|383|arginase, liver	DQ892039|ARG1|383|arginase, liver	DQ895230|ARG1|383|arginase, liver	BT006741|ARG1|383|arginase, liver
hg19_v1_chrX_+_106045880_106046083	0.00206377	SOX2.p2	AK123957|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)	NM_017752|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)	NM_198881|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)	BC122564|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)	BX648230|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)	AB449890|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)	AB449891|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)
hg19_v1_chr12_-_56679729_56679874	0.00206248	SOX2.p2	BC000105|CS|1431|citrate synthase	AF147410|CS|1431|citrate synthase	AK293263|CS|1431|citrate synthase
hg19_v1_chr4_-_48014960_48014960	0.00205952	SOX2.p2	AK292021|CNGA1|1259|cyclic nucleotide gated channel alpha 1	NM_000087|CNGA1|1259|cyclic nucleotide gated channel alpha 1
hg19_v1_chr17_-_79869033_79869105	0.00204663	SOX2.p2	AK297996|PCYT2|5833|phosphate cytidylyltransferase 2, ethanolamine	AK093328|PCYT2|5833|phosphate cytidylyltransferase 2, ethanolamine
hg19_v1_chr3_-_165555252_165555283	0.00204474	SOX2.p2	NM_000055|BCHE|590|butyrylcholinesterase
hg19_v1_chr17_+_61678277_61678442	0.00204153	SOX2.p2	BC007744|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I
hg19_v1_chr15_+_74908195_74908248	0.00203703	SOX2.p2	AK293769|CLK3|1198|CDC-like kinase 3	BC019881|CLK3|1198|CDC-like kinase 3	CR933693|CLK3|1198|CDC-like kinase 3	AK291983|CLK3|1198|CDC-like kinase 3	AK301689|CLK3|1198|CDC-like kinase 3	BC002555|CLK3|1198|CDC-like kinase 3	AK225680|CLK3|1198|CDC-like kinase 3	BC006103|CLK3|1198|CDC-like kinase 3
hg19_v1_chr1_-_1167374_1167410	0.0020359	SOX2.p2	AK075352|SDF4|51150|stromal cell derived factor 4	BC022375|SDF4|51150|stromal cell derived factor 4	AK027277|SDF4|51150|stromal cell derived factor 4	AF153686|SDF4|51150|stromal cell derived factor 4	AF178986|SDF4|51150|stromal cell derived factor 4
hg19_v1_chr21_-_27543445_27543445	0.00202751	SOX2.p2	AK296229|APP|351|amyloid beta (A4) precursor protein	NM_001136131|APP|351|amyloid beta (A4) precursor protein
hg19_v1_chr3_+_73045939_73045975	0.00202449	SOX2.p2	AK289901|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	BC100281|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2
hg19_v1_chr6_+_170615849_170615911	0.00201796	SOX2.p2	AB058741|FAM120B|84498|family with sequence similarity 120B	AL832883|FAM120B|84498|family with sequence similarity 120B
hg19_v1_chr4_-_103265818_103265919	0.00201676	SOX2.p2	DQ892212|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	DQ895407|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8
hg19_v1_chr12_-_31477080_31477095	0.00201184	SOX2.p2	AK294457|FAM60A|58516|family with sequence similarity 60, member A
hg19_v1_chr3_+_100211554_100211612	0.00201142	SOX2.p2	AK129789|TMEM45A|55076|transmembrane protein 45A
hg19_v1_chr14_-_25519076_25519401	0.00201029	SOX2.p2	BC067278|STXBP6|29091|syntaxin binding protein 6 (amisyn)	NM_014178|STXBP6|29091|syntaxin binding protein 6 (amisyn)	AK096957|STXBP6|29091|syntaxin binding protein 6 (amisyn)	AL834346|STXBP6|29091|syntaxin binding protein 6 (amisyn)	BC009499|STXBP6|29091|syntaxin binding protein 6 (amisyn)
hg19_v1_chr1_-_200377262_200377276	0.00197534	SOX2.p2	AK021707|ZNF281|23528|zinc finger protein 281
hg19_v1_chr2_+_238536183_238536535	0.00197137	SOX2.p2	NM_001137550|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1	AF115510|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1
hg19_v1_chr8_-_8750739_8751137	0.00196847	SOX2.p2	NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1
hg19_v1_chr13_-_45150391_45150470	0.00196239	SOX2.p2	AK091854|TSC22D1|8848|TSC22 domain family, member 1	BC136475|TSC22D1|8848|TSC22 domain family, member 1	BC136482|TSC22D1|8848|TSC22 domain family, member 1
hg19_v1_chr19_-_16683188_16683205	0.00195561	SOX2.p2	BC062562|SLC35E1|79939|solute carrier family 35, member E1	NM_024881|SLC35E1|79939|solute carrier family 35, member E1
hg19_v1_chr1_+_29138653_29138653	0.00195137	SOX2.p2	NM_000911|OPRD1|4985|opioid receptor, delta 1	U07882|OPRD1|4985|opioid receptor, delta 1
hg19_v1_chr9_-_138798957_138799366	0.00193606	SOX2.p2	NM_015447|CAMSAP1|157922|calmodulin regulated spectrin-associated protein 1
hg19_v1_chr14_-_54908035_54908197	0.00193153	SOX2.p2	BX248284|CNIH|10175|cornichon homolog (Drosophila)	AY358635|CNIH|10175|cornichon homolog (Drosophila)	AK074781|CNIH|10175|cornichon homolog (Drosophila)	AK307074|CNIH|10175|cornichon homolog (Drosophila)	AK311897|CNIH|10175|cornichon homolog (Drosophila)	AF070654|CNIH|10175|cornichon homolog (Drosophila)	AF104398|CNIH|10175|cornichon homolog (Drosophila)	NM_005776|CNIH|10175|cornichon homolog (Drosophila)	BC103741|CNIH|10175|cornichon homolog (Drosophila)
hg19_v1_chr9_-_125590809_125590934	0.00192716	SOX2.p2	BC017227|PDCL|5082|phosducin-like	AL117602|PDCL|5082|phosducin-like	AF031463|PDCL|5082|phosducin-like	AK313429|PDCL|5082|phosducin-like	NM_005388|PDCL|5082|phosducin-like
hg19_v1_chr20_-_22564893_22564939	0.00191718	SOX2.p2	BC006545|FOXA2|3170|forkhead box A2	BC019288|FOXA2|3170|forkhead box A2	DQ892883|FOXA2|3170|forkhead box A2	DQ896132|FOXA2|3170|forkhead box A2	AK301611|FOXA2|3170|forkhead box A2	BC011780|FOXA2|3170|forkhead box A2
hg19_v1_chr14_+_73603140_73603159	0.00190179	SOX2.p2	NM_000021|PSEN1|5663|presenilin 1	NM_007318|PSEN1|5663|presenilin 1	AK303876|PSEN1|5663|presenilin 1	AK312531|PSEN1|5663|presenilin 1
hg19_v1_chr9_+_4662285_4662337	0.00189441	SOX2.p2	BC038108|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2	NM_203453|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2	AK074672|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2	AK128369|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2
hg19_v1_chr19_+_7660698_7660944	0.00188978	SOX2.p2	BC035808|CAMSAP3|57662|calmodulin regulated spectrin-associated protein family, member 3	NM_001080429|CAMSAP3|57662|calmodulin regulated spectrin-associated protein family, member 3	NM_020902|CAMSAP3|57662|calmodulin regulated spectrin-associated protein family, member 3	BC020431|CAMSAP3|57662|calmodulin regulated spectrin-associated protein family, member 3
hg19_v1_chr6_+_25962978_25963089	0.00188884	SOX2.p2	BX640949|TRIM38|10475|tripartite motif containing 38	AK313248|TRIM38|10475|tripartite motif containing 38	BC026930|TRIM38|10475|tripartite motif containing 38	NM_006355|TRIM38|10475|tripartite motif containing 38	AB209906|TRIM38|10475|tripartite motif containing 38
hg19_v1_chrM_+_15950_15998	0.00187511	SOX2.p2	
hg19_v1_chr19_+_58898634_58898670	0.00186962	SOX2.p2	AK223106|RPS5|6193|ribosomal protein S5	AK311938|RPS5|6193|ribosomal protein S5	D28455|RPS5|6193|ribosomal protein S5	NM_001009|RPS5|6193|ribosomal protein S5	BC015405|RPS5|6193|ribosomal protein S5	BC018828|RPS5|6193|ribosomal protein S5	BC018151|RPS5|6193|ribosomal protein S5	BC035830|RPS5|6193|ribosomal protein S5	U14970|RPS5|6193|ribosomal protein S5
hg19_v1_chr4_-_84376943_84377024	0.00186886	SOX2.p2	BC095473|HELQ|113510|helicase, POLQ-like	BC011863|HELQ|113510|helicase, POLQ-like	BC065814|HELQ|113510|helicase, POLQ-like	BC111502|HELQ|113510|helicase, POLQ-like	AK308395|HELQ|113510|helicase, POLQ-like	AF436845|HELQ|113510|helicase, POLQ-like	AK312725|HELQ|113510|helicase, POLQ-like	AK128665|HELQ|113510|helicase, POLQ-like	BC015428|HELQ|113510|helicase, POLQ-like	NM_133636|HELQ|113510|helicase, POLQ-like
hg19_v1_chr12_-_110906056_110906088	0.00185489	SOX2.p2	AK223209|GPN3|51184|GPN-loop GTPase 3	AK314946|GPN3|51184|GPN-loop GTPase 3	BC008416|GPN3|51184|GPN-loop GTPase 3	BC031024|GPN3|51184|GPN-loop GTPase 3	AY359078|GPN3|51184|GPN-loop GTPase 3	BX537973|GPN3|51184|GPN-loop GTPase 3	NM_001164373|GPN3|51184|GPN-loop GTPase 3	NM_016301|GPN3|51184|GPN-loop GTPase 3
hg19_v1_chr10_-_52645430_52645440	0.00184261	SOX2.p2	BC054873|A1CF|29974|APOBEC1 complementation factor	AK000324|A1CF|29974|APOBEC1 complementation factor	NM_001198818|A1CF|29974|APOBEC1 complementation factor	NM_001198819|A1CF|29974|APOBEC1 complementation factor	NM_001198820|A1CF|29974|APOBEC1 complementation factor	NM_014576|A1CF|29974|APOBEC1 complementation factor	NM_138932|A1CF|29974|APOBEC1 complementation factor	NM_138933|A1CF|29974|APOBEC1 complementation factor
hg19_v1_chr18_-_3219846_3219875	0.00182906	SOX2.p2	BC116183|MYOM1|8736|myomesin 1, 185kDa	BC116184|MYOM1|8736|myomesin 1, 185kDa
hg19_v1_chr6_+_42981840_42981954	0.00182517	SOX2.p2	NM_057161|KLHDC3|116138|kelch domain containing 3	AK308917|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr7_-_99277518_99277624	0.00180962	SOX2.p2	DQ890743|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	DQ893913|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	DQ896802|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	EU176488|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	L26985|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	X90579|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	J04813|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	BC033862|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	BC025176|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	AK296205|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	AK313813|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	AK223008|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	AK299002|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	AK309166|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	BC022298|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	BC026255|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	BX648856|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	BX537676|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	NM_000777|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5	NM_001190484|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5
hg19_v1_chr3_+_172472246_172472359	0.00180651	SOX2.p2	BC112086|ECT2|1894|epithelial cell transforming sequence 2 oncogene	AK023267|ECT2|1894|epithelial cell transforming sequence 2 oncogene	NM_018098|ECT2|1894|epithelial cell transforming sequence 2 oncogene	DQ847274|ECT2|1894|epithelial cell transforming sequence 2 oncogene
hg19_v1_chr9_+_135906373_135906403	0.00180134	SOX2.p2	AK000194|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	AK097295|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	AK293980|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	BC006409|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	AY007123|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	DQ892071|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	DQ895265|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	AJ420443|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	BC030157|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa
hg19_v1_chr2_+_61389628_61389628	0.00179942	SOX2.p2	NM_001143959|C2orf74|339804|chromosome 2 open reading frame 74
hg19_v1_chr15_+_45879575_45879640	0.00179271	SOX2.p2	AK057545|PLDN|26258|pallidin homolog (mouse)	BC004819|PLDN|26258|pallidin homolog (mouse)	AK315581|PLDN|26258|pallidin homolog (mouse)
hg19_v1_chr19_+_41770057_41770241	0.00177788	SOX2.p2	NM_007040|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	AJ007509|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v1_chr10_-_123734641_123734702	0.00177026	SOX2.p2	
hg19_v1_chr6_-_31509725_31509767	0.00176955	SOX2.p2	AK222912|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	Z37166|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	BC000361|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AK295634|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
hg19_v1_chr17_+_55334373_55334373	0.00175964	SOX2.p2	AK093888|MSI2|124540|musashi homolog 2 (Drosophila)	NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)
hg19_v1_chr15_+_72766665_72766670	0.00175603	SOX2.p2	AJ243190|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)	NM_005744|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)	AK312715|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)
hg19_v1_chr2_+_219646448_219646500	0.00174822	SOX2.p2	AK226039|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	NM_000784|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	BC017044|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1
hg19_v1_chr8_-_145050896_145050958	0.00174178	SOX2.p2	U53204|PLEC|5339|plectin	NM_000445|PLEC|5339|plectin
hg19_v1_chr7_-_96633608_96633614	0.00171877	SOX2.p2	AK091367|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)	BC101445|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)	BC101446|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)	BC101447|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)	BC101985|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)	BC113049|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)
hg19_v1_chr19_-_56739658_56739679	0.00170831	SOX2.p2	BC002636|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A	NM_024303|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A	AK098700|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A
hg19_v1_chr14_-_73925279_73925303	0.00170355	SOX2.p2	BC068476|NUMB|8650|numb homolog (Drosophila)	NM_001005743|NUMB|8650|numb homolog (Drosophila)	NM_001005744|NUMB|8650|numb homolog (Drosophila)	NM_001005745|NUMB|8650|numb homolog (Drosophila)	NM_003744|NUMB|8650|numb homolog (Drosophila)
hg19_v1_chr9_+_134269509_134269623	0.00168188	SOX2.p2	BC002872|PRRC2B|84726|proline-rich coiled-coil 2B
hg19_v1_chr15_+_64791618_64791618	0.00167435	SOX2.p2	NM_015042|ZNF609|23060|zinc finger protein 609
hg19_v1_chr5_+_34687663_34687663	0.00167119	SOX2.p2	AY354204|RAI14|26064|retinoic acid induced 14	NM_001145523|RAI14|26064|retinoic acid induced 14
hg19_v1_chr14_-_69260630_69260630	0.00166839	SOX2.p2	NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1
hg19_v1_chr22_+_23522699_23522728	0.00166491	SOX2.p2	BC066122|BCR|613|breakpoint cluster region
hg19_v1_chr17_-_56429495_56429577	0.0016647	SOX2.p2	CR407663|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	EU446710|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	AK311986|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	U38817|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	BC002802|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	U38818|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	NM_003168|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	U43923|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	AK129758|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)
hg19_v1_chr14_-_58893867_58893909	0.00166312	SOX2.p2	AF150100|TIMM9|26520|translocase of inner mitochondrial membrane 9 homolog (yeast)	AK000666|TIMM9|26520|translocase of inner mitochondrial membrane 9 homolog (yeast)	AK312095|TIMM9|26520|translocase of inner mitochondrial membrane 9 homolog (yeast)
hg19_v1_chr17_+_26698986_26699029	0.00163886	SOX2.p2	NM_015077|SARM1|23098|sterile alpha and TIR motif containing 1
hg19_v1_chr7_-_126892304_126892427	0.0016311	SOX2.p2	AK315203|GRM8|2918|glutamate receptor, metabotropic 8	NM_001127323|GRM8|2918|glutamate receptor, metabotropic 8
hg19_v1_chr5_-_14871555_14872155	0.00162902	SOX2.p2	DQ892588|ANKH|56172|ankylosis, progressive homolog (mouse)	DQ895806|ANKH|56172|ankylosis, progressive homolog (mouse)	AK222631|ANKH|56172|ankylosis, progressive homolog (mouse)	AK315012|ANKH|56172|ankylosis, progressive homolog (mouse)	BC014526|ANKH|56172|ankylosis, progressive homolog (mouse)	AF274753|ANKH|56172|ankylosis, progressive homolog (mouse)	AY358503|ANKH|56172|ankylosis, progressive homolog (mouse)	AB046801|ANKH|56172|ankylosis, progressive homolog (mouse)	BC009835|ANKH|56172|ankylosis, progressive homolog (mouse)	NM_054027|ANKH|56172|ankylosis, progressive homolog (mouse)
hg19_v1_chr11_-_3013577_3013622	0.00161534	SOX2.p2	NM_005969|NAP1L4|4676|nucleosome assembly protein 1-like 4	U77456|NAP1L4|4676|nucleosome assembly protein 1-like 4	AK312599|NAP1L4|4676|nucleosome assembly protein 1-like 4
hg19_v1_chr17_-_7145645_7145740	0.00161397	SOX2.p2	CR457043|GABARAP|11337|GABA(A) receptor-associated protein	CR542235|GABARAP|11337|GABA(A) receptor-associated protein	BC106748|GABARAP|11337|GABA(A) receptor-associated protein	BC106749|GABARAP|11337|GABA(A) receptor-associated protein	AF161586|GABARAP|11337|GABA(A) receptor-associated protein	AF044671|GABARAP|11337|GABA(A) receptor-associated protein
hg19_v1_chr1_-_176176113_176176217	0.00161366	SOX2.p2	AF508940|RFWD2|64326|ring finger and WD repeat domain 2	AY509921|RFWD2|64326|ring finger and WD repeat domain 2
hg19_v1_chr17_-_4046298_4046323	0.00161231	SOX2.p2	AK127482|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1
hg19_v1_chr19_+_20011700_20011869	0.00160396	SOX2.p2	NM_031218|ZNF93|81931|zinc finger protein 93	BC020837|ZNF93|81931|zinc finger protein 93	BC070372|ZNF93|81931|zinc finger protein 93	BC107581|ZNF93|81931|zinc finger protein 93	AK096342|ZNF93|81931|zinc finger protein 93	BC058821|ZNF93|81931|zinc finger protein 93	BC038096|ZNF93|81931|zinc finger protein 93	BC136718|ZNF93|81931|zinc finger protein 93	BC136719|ZNF93|81931|zinc finger protein 93
hg19_v1_chr14_+_73603168_73603193	0.00159485	SOX2.p2	L42110|PSEN1|5663|presenilin 1
hg19_v1_chr2_+_219646704_219647079	0.00158933	SOX2.p2	X59812|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	AK290418|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	M62401|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	BC040430|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	BC051851|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	AK310782|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	AY178622|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1
hg19_v1_chr13_-_111567335_111567395	0.00158493	SOX2.p2	BC001727|ANKRD10|55608|ankyrin repeat domain 10	AK096083|ANKRD10|55608|ankyrin repeat domain 10	BC039715|ANKRD10|55608|ankyrin repeat domain 10
hg19_v1_chr6_-_151712644_151712777	0.00158151	SOX2.p2	BC020172|ZBTB2|57621|zinc finger and BTB domain containing 2	NM_020861|ZBTB2|57621|zinc finger and BTB domain containing 2	AK092886|ZBTB2|57621|zinc finger and BTB domain containing 2	AK291942|ZBTB2|57621|zinc finger and BTB domain containing 2
hg19_v1_chr8_-_33370552_33370702	0.00157752	SOX2.p2	AK026916|TTI2|80185|TELO2 interacting protein 2	BX648410|TTI2|80185|TELO2 interacting protein 2	BC007387|TTI2|80185|TELO2 interacting protein 2	BC066935|TTI2|80185|TELO2 interacting protein 2	NM_025115|TTI2|80185|TELO2 interacting protein 2	NM_001102401|TTI2|80185|TELO2 interacting protein 2
hg19_v1_chr3_-_50329702_50330025	0.00156789	SOX2.p2	U09585|IFRD2|7866|interferon-related developmental regulator 2	BT019999|IFRD2|7866|interferon-related developmental regulator 2	EU832626|IFRD2|7866|interferon-related developmental regulator 2	EU832699|IFRD2|7866|interferon-related developmental regulator 2	AK309114|IFRD2|7866|interferon-related developmental regulator 2	BC001676|IFRD2|7866|interferon-related developmental regulator 2	AK074763|IFRD2|7866|interferon-related developmental regulator 2	BC001327|IFRD2|7866|interferon-related developmental regulator 2	BC007265|IFRD2|7866|interferon-related developmental regulator 2	BC007437|IFRD2|7866|interferon-related developmental regulator 2	NM_006764|IFRD2|7866|interferon-related developmental regulator 2
hg19_v1_chr13_-_30424671_30424734	0.00156667	SOX2.p2	AK056580|UBL3|5412|ubiquitin-like 3
hg19_v1_chrX_+_148769902_148769902	0.00154356	SOX2.p2	AK127849|MAGEA11|4110|melanoma antigen family A, 11	NM_001011544|MAGEA11|4110|melanoma antigen family A, 11
hg19_v1_chr17_+_61271354_61271368	0.00153956	SOX2.p2	BC144357|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
hg19_v1_chr12_-_46663207_46663207	0.00152579	SOX2.p2	NM_001077484|SLC38A1|81539|solute carrier family 38, member 1	NM_030674|SLC38A1|81539|solute carrier family 38, member 1
hg19_v1_chr11_+_6518489_6518530	0.00152469	SOX2.p2	AK096944|DNHD1|144132|dynein heavy chain domain 1	NM_144666|DNHD1|144132|dynein heavy chain domain 1	NM_173589|DNHD1|144132|dynein heavy chain domain 1	BX648742|DNHD1|144132|dynein heavy chain domain 1
hg19_v1_chr2_-_96874569_96874628	0.00152379	SOX2.p2	NM_020151|STARD7|56910|StAR-related lipid transfer (START) domain containing 7
hg19_v1_chr9_-_35072596_35072636	0.00151814	SOX2.p2	BC096751|VCP|7415|valosin containing protein	AK312310|VCP|7415|valosin containing protein	BC012195|VCP|7415|valosin containing protein	BC017171|VCP|7415|valosin containing protein
hg19_v1_chr3_-_186079776_186080093	0.00151495	SOX2.p2	BC089411|DGKG|1608|diacylglycerol kinase, gamma 90kDa	AB209033|DGKG|1608|diacylglycerol kinase, gamma 90kDa	AK314192|DGKG|1608|diacylglycerol kinase, gamma 90kDa	D26135|DGKG|1608|diacylglycerol kinase, gamma 90kDa	AK304440|DGKG|1608|diacylglycerol kinase, gamma 90kDa	NM_001080744|DGKG|1608|diacylglycerol kinase, gamma 90kDa	NM_001080745|DGKG|1608|diacylglycerol kinase, gamma 90kDa	NM_001346|DGKG|1608|diacylglycerol kinase, gamma 90kDa
hg19_v1_chr10_-_72142344_72142385	0.0015052	SOX2.p2	AK094734|LRRC20|55222|leucine rich repeat containing 20	AK001613|LRRC20|55222|leucine rich repeat containing 20	AK001706|LRRC20|55222|leucine rich repeat containing 20	NM_018205|LRRC20|55222|leucine rich repeat containing 20	NM_018239|LRRC20|55222|leucine rich repeat containing 20
hg19_v1_chr12_+_53845884_53845886	0.00150282	SOX2.p2	AB188306|PCBP2|5094|poly(rC) binding protein 2	NM_001098620|PCBP2|5094|poly(rC) binding protein 2	NM_001128911|PCBP2|5094|poly(rC) binding protein 2	NM_001128912|PCBP2|5094|poly(rC) binding protein 2	NM_001128913|PCBP2|5094|poly(rC) binding protein 2	NM_001128914|PCBP2|5094|poly(rC) binding protein 2	NM_005016|PCBP2|5094|poly(rC) binding protein 2	NM_031989|PCBP2|5094|poly(rC) binding protein 2
hg19_v1_chr17_-_2240677_2240800	0.00150131	SOX2.p2	NM_018128|TSR1|55720|TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)	AB037822|TSR1|55720|TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)
hg19_v1_chr6_+_3259185_3259293	0.00148692	SOX2.p2	AK126623|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4	AK095683|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4
hg19_v1_chr20_-_44718545_44718562	0.0014835	SOX2.p2	AF230533|NCOA5|57727|nuclear receptor coactivator 5
hg19_v1_chr17_+_79651072_79651096	0.00146498	SOX2.p2	AF260566|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	DQ892551|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	DQ895762|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	BT009754|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg19_v1_chr14_-_35344852_35344852	0.00146365	SOX2.p2	AB032252|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A	NM_013448|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A	NM_182648|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg19_v1_chr16_+_127017_127017	0.00144171	SOX2.p2	NM_001015054|MPG|4350|N-methylpurine-DNA glycosylase
hg19_v1_chr10_+_99400469_99400499	0.00143482	SOX2.p2	BC003167|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha	DQ893537|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha	DQ893758|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha	BT007330|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha
hg19_v1_chr1_+_220267418_220267487	0.00143076	SOX2.p2	AY267462|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial	NM_018060|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial	BC137438|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial
hg19_v1_chr3_-_57583153_57583228	0.00143	SOX2.p2	NM_001660|ARF4|378|ADP-ribosylation factor 4
hg19_v1_chr12_-_31743822_31744014	0.00139455	SOX2.p2	BC068580|DENND5B|160518|DENN/MADD domain containing 5B	NM_144973|DENND5B|160518|DENN/MADD domain containing 5B
hg19_v1_chr15_-_50647349_50647361	0.00138191	SOX2.p2	U13045|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	U13046|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	U13047|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	U13048|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg19_v1_chr1_+_221053000_221053199	0.00137369	SOX2.p2	DQ893305|HLX|3142|H2.0-like homeobox	DQ896761|HLX|3142|H2.0-like homeobox
hg19_v1_chr1_+_150039815_150039913	0.00136789	SOX2.p2	AK298835|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK023170|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK293555|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	BC012932|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AF165513|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK295529|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AJ133421|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK223214|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK307949|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)
hg19_v1_chr1_-_153643433_153643454	0.00136726	SOX2.p2	U10323|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	AK302214|ILF2|3608|interleukin enhancer binding factor 2, 45kDa
hg19_v1_chr9_+_131644780_131644780	0.00136355	SOX2.p2	AK289842|LRRC8A|56262|leucine rich repeat containing 8 family, member A	NM_001127244|LRRC8A|56262|leucine rich repeat containing 8 family, member A
hg19_v1_chr7_-_29186072_29186154	0.00136271	SOX2.p2	AF106704|CPVL|54504|carboxypeptidase, vitellogenic-like	AF282617|CPVL|54504|carboxypeptidase, vitellogenic-like	AK225545|CPVL|54504|carboxypeptidase, vitellogenic-like	BC016838|CPVL|54504|carboxypeptidase, vitellogenic-like	AK075433|CPVL|54504|carboxypeptidase, vitellogenic-like	NM_019029|CPVL|54504|carboxypeptidase, vitellogenic-like	NM_031311|CPVL|54504|carboxypeptidase, vitellogenic-like
hg19_v1_chr17_-_47492216_47492280	0.00135656	SOX2.p2	S85655|PHB|5245|prohibitin	BC013401|PHB|5245|prohibitin	AK307767|PHB|5245|prohibitin	AK223181|PHB|5245|prohibitin	AK290766|PHB|5245|prohibitin	AK302258|PHB|5245|prohibitin	AK312649|PHB|5245|prohibitin	NM_002634|PHB|5245|prohibitin
hg19_v1_chr5_-_134734886_134734891	0.00134621	SOX2.p2	BC095406|H2AFY|9555|H2A histone family, member Y
hg19_v1_chr10_+_99400441_99400444	0.00133875	SOX2.p2	AJ303098|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha	NM_018425|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha
hg19_v1_chr15_-_63892950_63893135	0.00133709	SOX2.p2	BC017581|LOC100130855|100130855|uncharacterized LOC100130855	BC036918|LOC100130855|100130855|uncharacterized LOC100130855	AK093077|LOC100130855|100130855|uncharacterized LOC100130855
hg19_v1_chr5_-_173043606_173043651	0.00133425	SOX2.p2	AK301982|BOD1|91272|biorientation of chromosomes in cell division 1
hg19_v1_chr12_-_110906007_110906053	0.00131825	SOX2.p2	AM992619|GPN3|51184|GPN-loop GTPase 3	AM992620|GPN3|51184|GPN-loop GTPase 3	AY364262|GPN3|51184|GPN-loop GTPase 3	AM393009|GPN3|51184|GPN-loop GTPase 3	AM393821|GPN3|51184|GPN-loop GTPase 3	AF117229|GPN3|51184|GPN-loop GTPase 3
hg19_v1_chr3_+_9773769_9773804	0.0013124	SOX2.p2	M91585|BRPF1|7862|bromodomain and PHD finger containing, 1
hg19_v1_chr16_-_58663739_58663751	0.00129956	SOX2.p2	BC040523|CNOT1|23019|CCR4-NOT transcription complex, subunit 1	AL833549|CNOT1|23019|CCR4-NOT transcription complex, subunit 1	NM_016284|CNOT1|23019|CCR4-NOT transcription complex, subunit 1	NM_206999|CNOT1|23019|CCR4-NOT transcription complex, subunit 1
hg19_v1_chr3_+_23986735_23986895	0.00129675	SOX2.p2	NM_005126|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	D16815|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	AK313464|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	BC045613|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	BC070035|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2
hg19_v1_chr14_+_64971226_64971291	0.00127418	SOX2.p2	BX248777|ZBTB1|22890|zinc finger and BTB domain containing 1	NM_001123329|ZBTB1|22890|zinc finger and BTB domain containing 1	NM_014950|ZBTB1|22890|zinc finger and BTB domain containing 1
hg19_v1_chr12_-_106532447_106532918	0.00127067	SOX2.p2	AK289992|NUAK1|9891|NUAK family, SNF1-like kinase, 1	AK027302|NUAK1|9891|NUAK family, SNF1-like kinase, 1
hg19_v1_chr8_-_72273965_72274006	0.00126746	SOX2.p2	AK127798|EYA1|2138|eyes absent homolog 1 (Drosophila)	AK295897|EYA1|2138|eyes absent homolog 1 (Drosophila)
hg19_v1_chr15_-_41836442_41836456	0.00126661	SOX2.p2	AB037824|RPAP1|26015|RNA polymerase II associated protein 1	AK290224|RPAP1|26015|RNA polymerase II associated protein 1	BC000246|RPAP1|26015|RNA polymerase II associated protein 1
hg19_v1_chr6_-_88299726_88299753	0.00126156	SOX2.p2	NM_020320|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial
hg19_v1_chr22_-_50970542_50970589	0.00126036	SOX2.p2	BC127934|ODF3B|440836|outer dense fiber of sperm tails 3B	BC127935|ODF3B|440836|outer dense fiber of sperm tails 3B
hg19_v1_chr3_-_39322763_39322763	0.00125348	SOX2.p2	NM_001171171|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1
hg19_v1_chr10_-_52645384_52645402	0.00125039	SOX2.p2	BC022263|A1CF|29974|APOBEC1 complementation factor	AF209192|A1CF|29974|APOBEC1 complementation factor	AK291982|A1CF|29974|APOBEC1 complementation factor	AK303801|A1CF|29974|APOBEC1 complementation factor
hg19_v1_chr11_-_59383616_59383616	0.00124957	SOX2.p2	AF185696|OSBP|5007|oxysterol binding protein	M86917|OSBP|5007|oxysterol binding protein	NM_002556|OSBP|5007|oxysterol binding protein
hg19_v1_chr9_+_117349993_117350083	0.00124424	SOX2.p2	NM_004888|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1	BC003564|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1	AF038954|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1	BC008452|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1
hg19_v1_chr17_-_74068597_74068631	0.00123915	SOX2.p2	AK002002|SRP68|6730|signal recognition particle 68kDa	NM_014230|SRP68|6730|signal recognition particle 68kDa
hg19_v1_chr8_+_99956630_99956685	0.00122549	SOX2.p2	NM_001142462|OSR2|116039|odd-skipped related 2 (Drosophila)	NM_053001|OSR2|116039|odd-skipped related 2 (Drosophila)	AK074518|OSR2|116039|odd-skipped related 2 (Drosophila)	AK291491|OSR2|116039|odd-skipped related 2 (Drosophila)	AK310994|OSR2|116039|odd-skipped related 2 (Drosophila)	BC016936|OSR2|116039|odd-skipped related 2 (Drosophila)	AY038073|OSR2|116039|odd-skipped related 2 (Drosophila)
hg19_v1_chr14_-_31495524_31495617	0.00122407	SOX2.p2	BC126221|STRN3|29966|striatin, calmodulin binding protein 3	BC132673|STRN3|29966|striatin, calmodulin binding protein 3	BC143933|STRN3|29966|striatin, calmodulin binding protein 3	AK314041|STRN3|29966|striatin, calmodulin binding protein 3	AK290229|STRN3|29966|striatin, calmodulin binding protein 3	U17989|STRN3|29966|striatin, calmodulin binding protein 3	NM_001083893|STRN3|29966|striatin, calmodulin binding protein 3	NM_014574|STRN3|29966|striatin, calmodulin binding protein 3
hg19_v1_chr1_-_101360337_101360403	0.0012201	SOX2.p2	AK312895|EXTL2|2135|exostoses (multiple)-like 2	AB009284|EXTL2|2135|exostoses (multiple)-like 2	AF000416|EXTL2|2135|exostoses (multiple)-like 2	AK096914|EXTL2|2135|exostoses (multiple)-like 2	BC036015|EXTL2|2135|exostoses (multiple)-like 2	AK298124|EXTL2|2135|exostoses (multiple)-like 2
hg19_v1_chr3_+_47844627_47844685	0.00121448	SOX2.p2	AK096791|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC020126|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC038417|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC015029|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AB020697|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC063510|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30
hg19_v1_chr6_+_42981955_42981958	0.00121433	SOX2.p2	BC012987|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr1_+_61542790_61542922	0.00120497	SOX2.p2	
hg19_v1_chr7_-_128045995_128046039	0.00120078	SOX2.p2	AK054640|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	AK293413|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	AK297943|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	NM_001142573|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	NM_001142574|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	NM_001142575|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1
hg19_v1_chr1_-_151319674_151319702	0.00119235	SOX2.p2	X85786|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)	BC017471|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)
hg19_v1_chr6_+_88299784_88299891	0.00119209	SOX2.p2	NM_001197259|ORC3|23595|origin recognition complex, subunit 3	NM_012381|ORC3|23595|origin recognition complex, subunit 3	NM_181837|ORC3|23595|origin recognition complex, subunit 3	AF125507|ORC3|23595|origin recognition complex, subunit 3	AK316298|ORC3|23595|origin recognition complex, subunit 3	AL080116|ORC3|23595|origin recognition complex, subunit 3	AK222795|ORC3|23595|origin recognition complex, subunit 3	AK303056|ORC3|23595|origin recognition complex, subunit 3	AF093535|ORC3|23595|origin recognition complex, subunit 3	AK303195|ORC3|23595|origin recognition complex, subunit 3	AK302750|ORC3|23595|origin recognition complex, subunit 3	BC047689|ORC3|23595|origin recognition complex, subunit 3	BC035494|ORC3|23595|origin recognition complex, subunit 3	AK315911|ORC3|23595|origin recognition complex, subunit 3	AK303182|ORC3|23595|origin recognition complex, subunit 3	EU446990|ORC3|23595|origin recognition complex, subunit 3	EU831634|ORC3|23595|origin recognition complex, subunit 3	AF135044|ORC3|23595|origin recognition complex, subunit 3
hg19_v1_chr3_+_73046081_73046159	0.00116994	SOX2.p2	AF327345|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	NM_174907|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	BC128136|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	BC128137|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2
hg19_v1_chr19_+_18530211_18530240	0.00116828	SOX2.p2	BC000274|SSBP4|170463|single stranded DNA binding protein 4	AK098429|SSBP4|170463|single stranded DNA binding protein 4
hg19_v1_chr17_+_42786060_42786065	0.00116544	SOX2.p2	BC033660|DBF4B|80174|DBF4 homolog B (S. cerevisiae)
hg19_v1_chr11_-_79151694_79151755	0.00115818	SOX2.p2	NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)
hg19_v1_chrX_-_11683820_11683820	0.00115745	SOX2.p2	AF012272|ARHGAP6|395|Rho GTPase activating protein 6	AF022212|ARHGAP6|395|Rho GTPase activating protein 6	AF117067|ARHGAP6|395|Rho GTPase activating protein 6	NM_006125|ARHGAP6|395|Rho GTPase activating protein 6	NM_013427|ARHGAP6|395|Rho GTPase activating protein 6
hg19_v1_chr9_-_140083010_140083021	0.00115712	SOX2.p2	AK294601|ANAPC2|29882|anaphase promoting complex subunit 2
hg19_v1_chr6_+_15246299_15246526	0.00115521	SOX2.p2	AK292861|JARID2|3720|jumonji, AT rich interactive domain 2	BC046246|JARID2|3720|jumonji, AT rich interactive domain 2	NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2	U57592|JARID2|3720|jumonji, AT rich interactive domain 2
hg19_v1_chr10_-_91102430_91102481	0.00115202	SOX2.p2	AK091558|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase
hg19_v1_chr3_-_49066858_49066883	0.00115114	SOX2.p2	NM_000884|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2
hg19_v1_chr4_+_15341559_15341611	0.0011464	SOX2.p2	BX647781|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	NM_001135170|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	AK314802|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	BC022187|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	BC024015|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7
hg19_v1_chr1_-_153643474_153643506	0.00113937	SOX2.p2	NM_004515|ILF2|3608|interleukin enhancer binding factor 2, 45kDa
hg19_v1_chr14_+_67827042_67827058	0.00113835	SOX2.p2	AK312442|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	BX161521|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	AK297244|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg19_v1_chr6_+_30297087_30297094	0.00112744	SOX2.p2	NM_001199119|TRIM39-RPP21|202658|TRIM39-RPP21 readthrough	BT007370|TRIM39|56658|tripartite motif containing 39
hg19_v1_chr4_+_6717899_6717945	0.00112152	SOX2.p2	BC067815|CNO|55330|cappuccino homolog (mouse)	BC001818|CNO|55330|cappuccino homolog (mouse)	BC009890|CNO|55330|cappuccino homolog (mouse)
hg19_v1_chr12_-_7079828_7079923	0.00111611	SOX2.p2	AK298217|PHB2|11331|prohibitin 2	AK301316|PHB2|11331|prohibitin 2	AF126021|PHB2|11331|prohibitin 2	NM_007273|PHB2|11331|prohibitin 2	BC110322|PHB2|11331|prohibitin 2	NM_001144831|PHB2|11331|prohibitin 2
hg19_v1_chr1_+_155293727_155293727	0.00110098	SOX2.p2	BC052277|RUSC1|23623|RUN and SH3 domain containing 1	NM_001105205|RUSC1|23623|RUN and SH3 domain containing 1
hg19_v1_chr1_+_25071967_25072044	0.00109762	SOX2.p2	AF109196|CLIC4|25932|chloride intracellular channel 4	AM393644|CLIC4|25932|chloride intracellular channel 4	CR533501|CLIC4|25932|chloride intracellular channel 4
hg19_v1_chr17_-_73775822_73775861	0.00109738	SOX2.p2	BC108701|H3F3B|3021|H3 histone, family 3B (H3.3B)	AF218029|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC001124|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC006497|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC012813|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC017558|H3F3B|3021|H3 histone, family 3B (H3.3B)	BX647280|H3F3B|3021|H3 histone, family 3B (H3.3B)	AK130772|H3F3B|3021|H3 histone, family 3B (H3.3B)	AK304607|H3F3B|3021|H3 histone, family 3B (H3.3B)	AK312762|H3F3B|3021|H3 histone, family 3B (H3.3B)	BX537379|H3F3B|3021|H3 histone, family 3B (H3.3B)	NM_005324|H3F3B|3021|H3 histone, family 3B (H3.3B)
hg19_v1_chr4_-_39979159_39979517	0.00109198	SOX2.p2	AK098331|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	BC114218|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
hg19_v1_chr2_-_64371444_64371604	0.00106878	SOX2.p2	BC063611|PELI1|57162|pellino homolog 1 (Drosophila)	BC050533|PELI1|57162|pellino homolog 1 (Drosophila)	AK312441|PELI1|57162|pellino homolog 1 (Drosophila)	BC050019|PELI1|57162|pellino homolog 1 (Drosophila)	NM_020651|PELI1|57162|pellino homolog 1 (Drosophila)
hg19_v1_chr17_-_74068583_74068587	0.00106132	SOX2.p2	AK126258|SRP68|6730|signal recognition particle 68kDa
hg19_v1_chr16_-_15188089_15188167	0.00106109	SOX2.p2	AK300253|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	HQ258337|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC036182|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AK314769|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AK316520|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC132688|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC132690|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC104660|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AJ272050|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AF227156|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	NM_018427|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AK225662|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)
hg19_v1_chr4_-_2263706_2263798	0.00106045	SOX2.p2	BT019969|MXD4|10608|MAX dimerization protein 4	BT019970|MXD4|10608|MAX dimerization protein 4	AF040963|MXD4|10608|MAX dimerization protein 4	AF082740|MXD4|10608|MAX dimerization protein 4	NM_006454|MXD4|10608|MAX dimerization protein 4	BC068060|MXD4|10608|MAX dimerization protein 4
hg19_v1_chr1_+_228285594_228285686	0.00106001	SOX2.p2	BC010415|ARF1|375|ADP-ribosylation factor 1
hg19_v1_chr4_-_17783134_17783134	0.00105939	SOX2.p2	AK308144|FAM184B|27146|family with sequence similarity 184, member B	NM_015688|FAM184B|27146|family with sequence similarity 184, member B
hg19_v1_chr8_+_59323822_59323948	0.00105147	SOX2.p2	BC113645|UBXN2B|137886|UBX domain protein 2B	NM_001077619|UBXN2B|137886|UBX domain protein 2B	AK126300|UBXN2B|137886|UBX domain protein 2B	HQ258392|UBXN2B|137886|UBX domain protein 2B	AL831990|UBXN2B|137886|UBX domain protein 2B	AL833075|UBXN2B|137886|UBX domain protein 2B	BX647876|UBXN2B|137886|UBX domain protein 2B
hg19_v1_chr14_+_90863365_90863489	0.00104011	SOX2.p2	BC011834|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	BC047523|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	U16851|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	BC000454|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	BC008597|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	AK289937|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	M27319|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)
hg19_v1_chr4_+_54243822_54243828	0.00102549	SOX2.p2	BC110383|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr1_-_155214315_155214652	0.00102346	SOX2.p2	BC062626|GBAP1|2630|glucosidase, beta, acid pseudogene 1	AK311242|GBA|2629|glucosidase, beta, acid	AK312502|GBA|2629|glucosidase, beta, acid	BX648487|GBA|2629|glucosidase, beta, acid	AK300829|GBA|2629|glucosidase, beta, acid	AK291911|GBA|2629|glucosidase, beta, acid	AK300876|GBA|2629|glucosidase, beta, acid	NM_001005741|GBA|2629|glucosidase, beta, acid	NM_001005742|GBA|2629|glucosidase, beta, acid	NM_001171811|GBA|2629|glucosidase, beta, acid
hg19_v1_chr1_+_43148359_43148810	0.000996209	SOX2.p2	BC013838|YBX1|4904|Y box binding protein 1
hg19_v1_chr2_+_160569027_160569054	0.0009893	SOX2.p2	BC065014|MARCH7|64844|membrane-associated ring finger (C3HC4) 7
hg19_v1_chrX_-_77041678_77041774	0.000984648	SOX2.p2	AB208928|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	AK308419|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	AK307791|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	U72936|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	U72937|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	U72938|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	NM_000489|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	NM_138270|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked
hg19_v1_chr7_+_44795786_44795848	0.000969016	SOX2.p2	NM_174929|ZMIZ2|83637|zinc finger, MIZ-type containing 2	BC131780|ZMIZ2|83637|zinc finger, MIZ-type containing 2	BC016968|ZMIZ2|83637|zinc finger, MIZ-type containing 2	AY426594|ZMIZ2|83637|zinc finger, MIZ-type containing 2	AF357908|ZMIZ2|83637|zinc finger, MIZ-type containing 2
hg19_v1_chr9_+_112403067_112403071	0.000967744	SOX2.p2	BC039306|PALM2|114299|paralemmin 2	NM_001037293|PALM2|114299|paralemmin 2	AK095003|PALM2|114299|paralemmin 2
hg19_v1_chr11_-_118661856_118661862	0.000964123	SOX2.p2	BC026228|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg19_v1_chr18_+_77253324_77253436	0.000955278	SOX2.p2	BC045628|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1
hg19_v1_chr2_+_201170603_201170615	0.000953501	SOX2.p2	NM_015535|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK290496|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like
hg19_v1_chr6_-_88299692_88299723	0.00095268	SOX2.p2	AK023550|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	BC022341|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	BC010420|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial
hg19_v1_chrX_+_10124984_10125125	0.000938586	SOX2.p2	NM_001830|CLCN4|1183|chloride channel 4	AK225287|CLCN4|1183|chloride channel 4	X77197|CLCN4|1183|chloride channel 4	AK289564|CLCN4|1183|chloride channel 4	BC130278|CLCN4|1183|chloride channel 4
hg19_v1_chr12_-_7079616_7079827	0.000926378	SOX2.p2	DQ891808|PHB2|11331|prohibitin 2	EU176626|PHB2|11331|prohibitin 2	BC014766|PHB2|11331|prohibitin 2	BC013228|PHB2|11331|prohibitin 2	AF178980|PHB2|11331|prohibitin 2	AF150962|PHB2|11331|prohibitin 2
hg19_v1_chr1_-_31538762_31538804	0.000919571	SOX2.p2	BX647437|PUM1|9698|pumilio homolog 1 (Drosophila)
hg19_v1_chr16_+_67876221_67876300	0.000918721	SOX2.p2	AK289367|THAP11|57215|THAP domain containing 11	BC012182|THAP11|57215|THAP domain containing 11
hg19_v1_chr6_-_135375954_135376035	0.000916897	SOX2.p2	AK024258|HBS1L|10767|HBS1-like (S. cerevisiae)	AK295545|HBS1L|10767|HBS1-like (S. cerevisiae)	AF161394|HBS1L|10767|HBS1-like (S. cerevisiae)	U87791|HBS1L|10767|HBS1-like (S. cerevisiae)	AJ459826|HBS1L|10767|HBS1-like (S. cerevisiae)	AJ459827|HBS1L|10767|HBS1-like (S. cerevisiae)	NM_001145158|HBS1L|10767|HBS1-like (S. cerevisiae)	NM_001145207|HBS1L|10767|HBS1-like (S. cerevisiae)	NM_006620|HBS1L|10767|HBS1-like (S. cerevisiae)
hg19_v1_chr17_+_26794838_26794968	0.000914305	SOX2.p2	
hg19_v1_chr15_-_73925658_73925795	0.00091041	SOX2.p2	BC105979|NPTN|27020|neuroplastin	AK129908|NPTN|27020|neuroplastin	AF109126|NPTN|27020|neuroplastin	AF109127|NPTN|27020|neuroplastin	AB209812|NPTN|27020|neuroplastin	BC067828|NPTN|27020|neuroplastin	NM_001161363|NPTN|27020|neuroplastin	NM_001161364|NPTN|27020|neuroplastin	NM_012428|NPTN|27020|neuroplastin	NM_017455|NPTN|27020|neuroplastin
hg19_v1_chrX_+_70752911_70752940	0.000910195	SOX2.p2	NM_181672|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	NM_181673|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	AL833085|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
hg19_v1_chr8_-_17942304_17942352	0.000890383	SOX2.p2	AY305384|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1
hg19_v1_chr10_+_85899184_85899331	0.000885347	SOX2.p2	NM_014394|GHITM|27069|growth hormone inducible transmembrane protein	AK299937|GHITM|27069|growth hormone inducible transmembrane protein	AF078863|GHITM|27069|growth hormone inducible transmembrane protein	AF131820|GHITM|27069|growth hormone inducible transmembrane protein	AL136713|GHITM|27069|growth hormone inducible transmembrane protein	AF161400|GHITM|27069|growth hormone inducible transmembrane protein	AK130094|GHITM|27069|growth hormone inducible transmembrane protein	BC022872|GHITM|27069|growth hormone inducible transmembrane protein	AK225318|GHITM|27069|growth hormone inducible transmembrane protein	AF060923|GHITM|27069|growth hormone inducible transmembrane protein	AK098770|GHITM|27069|growth hormone inducible transmembrane protein	AK298332|GHITM|27069|growth hormone inducible transmembrane protein	BC010354|GHITM|27069|growth hormone inducible transmembrane protein	AK130097|GHITM|27069|growth hormone inducible transmembrane protein	AK297960|GHITM|27069|growth hormone inducible transmembrane protein	AK292864|GHITM|27069|growth hormone inducible transmembrane protein	AY358824|GHITM|27069|growth hormone inducible transmembrane protein
hg19_v1_chr17_-_31204187_31204239	0.000879264	SOX2.p2	BC030602|MYO1D|4642|myosin ID
hg19_v1_chr17_+_79651052_79651070	0.000878648	SOX2.p2	
hg19_v1_chr10_+_126630691_126630691	0.000874692	SOX2.p2	NM_017580|ZRANB1|54764|zinc finger, RAN-binding domain containing 1
hg19_v1_chr3_-_14989616_14989659	0.000863995	SOX2.p2	BC008609|LOC100505641|100505641|uncharacterized LOC100505641
hg19_v1_chr14_-_20922969_20923022	0.00085834	SOX2.p2	AK000418|OSGEP|55644|O-sialoglycoprotein endopeptidase	BC032310|OSGEP|55644|O-sialoglycoprotein endopeptidase
hg19_v1_chr15_-_86338017_86338177	0.000855081	SOX2.p2	AL136796|KLHL25|64410|kelch-like 25 (Drosophila)	BC028100|KLHL25|64410|kelch-like 25 (Drosophila)	AK056663|KLHL25|64410|kelch-like 25 (Drosophila)	AK315541|KLHL25|64410|kelch-like 25 (Drosophila)	AK092231|KLHL25|64410|kelch-like 25 (Drosophila)	AY764034|KLHL25|64410|kelch-like 25 (Drosophila)
hg19_v1_chr19_+_50180408_50180491	0.000850304	SOX2.p2	AK304660|PRMT1|3276|protein arginine methyltransferase 1	NM_001207042|PRMT1|3276|protein arginine methyltransferase 1	NM_001536|PRMT1|3276|protein arginine methyltransferase 1	NM_198318|PRMT1|3276|protein arginine methyltransferase 1
hg19_v1_chr3_+_49977476_49977577	0.000817476	SOX2.p2	AK291719|RBM6|10180|RNA binding motif protein 6	NM_001167582|RBM6|10180|RNA binding motif protein 6	NM_005777|RBM6|10180|RNA binding motif protein 6	AK298108|RBM6|10180|RNA binding motif protein 6	AF069517|RBM6|10180|RNA binding motif protein 6	AL832236|RBM6|10180|RNA binding motif protein 6	BX648535|RBM6|10180|RNA binding motif protein 6
hg19_v1_chr11_-_71823737_71823825	0.000813663	SOX2.p2	AK311146|C11orf51|25906|chromosome 11 open reading frame 51	AK222622|C11orf51|25906|chromosome 11 open reading frame 51	BC005156|C11orf51|25906|chromosome 11 open reading frame 51	BC005393|C11orf51|25906|chromosome 11 open reading frame 51	AF077206|C11orf51|25906|chromosome 11 open reading frame 51	NM_014042|C11orf51|25906|chromosome 11 open reading frame 51	AL080071|C11orf51|25906|chromosome 11 open reading frame 51
hg19_v1_chr5_+_68800003_68800071	0.000802197	SOX2.p2	NM_001205255|OCLN|100506658|occludin	FJ786083|OCLN|100506658|occludin	FJ786084|OCLN|100506658|occludin	GQ225096|OCLN|100506658|occludin	GQ225097|OCLN|100506658|occludin	GQ225098|OCLN|100506658|occludin	GQ402517|OCLN|100506658|occludin	DQ892423|OCLN|100506658|occludin	DQ895637|OCLN|100506658|occludin	AB451306|OCLN|100506658|occludin	AB451437|OCLN|100506658|occludin
hg19_v1_chr14_+_73603160_73603161	0.000791951	SOX2.p2	BC011729|PSEN1|5663|presenilin 1
hg19_v1_chr2_-_25194484_25194607	0.00079001	SOX2.p2	AK294726|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27
hg19_v1_chr17_-_76921453_76921501	0.000785708	SOX2.p2	BC071586|TIMP2|7077|TIMP metallopeptidase inhibitor 2	NM_003255|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg19_v1_chr1_+_153606550_153606574	0.000784489	SOX2.p2	AF318362|CHTOP|26097|chromatin target of PRMT1	AK095230|CHTOP|26097|chromatin target of PRMT1	AK308713|CHTOP|26097|chromatin target of PRMT1	AK309844|CHTOP|26097|chromatin target of PRMT1
hg19_v1_chr5_+_180650233_180650264	0.000780629	SOX2.p2	NM_033549|TRIM41|90933|tripartite motif containing 41	NM_201627|TRIM41|90933|tripartite motif containing 41
hg19_v1_chr1_+_226250407_226250412	0.000778219	SOX2.p2	AK311905|H3F3A|3020|H3 histone, family 3A	NM_002107|H3F3A|3020|H3 histone, family 3A
hg19_v1_chr1_+_33004969_33005120	0.000773488	SOX2.p2	AK074546|ZBTB8A|653121|zinc finger and BTB domain containing 8A	AY157873|ZBTB8A|653121|zinc finger and BTB domain containing 8A	BC015239|ZBTB8A|653121|zinc finger and BTB domain containing 8A
hg19_v1_chr16_+_24551672_24552056	0.000768174	SOX2.p2	AF063596|RBBP6|5930|retinoblastoma binding protein 6	BC101139|RBBP6|5930|retinoblastoma binding protein 6	BC101140|RBBP6|5930|retinoblastoma binding protein 6	BC101141|RBBP6|5930|retinoblastoma binding protein 6	BC101142|RBBP6|5930|retinoblastoma binding protein 6	BC114353|RBBP6|5930|retinoblastoma binding protein 6	BC114354|RBBP6|5930|retinoblastoma binding protein 6	BC118667|RBBP6|5930|retinoblastoma binding protein 6	BC139830|RBBP6|5930|retinoblastoma binding protein 6	BC029352|RBBP6|5930|retinoblastoma binding protein 6	BC063524|RBBP6|5930|retinoblastoma binding protein 6	AB112074|RBBP6|5930|retinoblastoma binding protein 6	AB112075|RBBP6|5930|retinoblastoma binding protein 6	BX648661|RBBP6|5930|retinoblastoma binding protein 6
hg19_v1_chr3_+_135741576_135741660	0.000767363	SOX2.p2	NM_181897|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	AK316258|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	L12146|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha
hg19_v1_chr3_+_127771342_127771391	0.000760206	SOX2.p2	
hg19_v1_chr2_+_47168362_47168444	0.000745771	SOX2.p2	BC111487|TTC7A|57217|tetratricopeptide repeat domain 7A
hg19_v1_chr10_+_93558068_93558138	0.000740645	SOX2.p2	AF438201|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
hg19_v1_chr6_+_32940860_32940860	0.000737741	SOX2.p2	BX647233|BRD2|6046|bromodomain containing 2	NM_001199456|BRD2|6046|bromodomain containing 2
hg19_v1_chr8_-_110661007_110661131	0.000737711	SOX2.p2	AL713645|SYBU|55638|syntabulin (syntaxin-interacting)	AB195676|SYBU|55638|syntabulin (syntaxin-interacting)	AB195677|SYBU|55638|syntabulin (syntaxin-interacting)	AB195678|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099747|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099748|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099749|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099750|SYBU|55638|syntabulin (syntaxin-interacting)	NM_017786|SYBU|55638|syntabulin (syntaxin-interacting)
hg19_v1_chr6_+_144164472_144164507	0.000727366	SOX2.p2	BC009855|LTV1|84946|LTV1 homolog (S. cerevisiae)	NM_032860|LTV1|84946|LTV1 homolog (S. cerevisiae)
hg19_v1_chr15_-_65477645_65477727	0.00072735	SOX2.p2	AL136922|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)	AK308133|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)	AK292316|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)	AK310614|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)
hg19_v1_chr12_-_110939877_110939944	0.000720334	SOX2.p2	BC015095|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF201946|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF175264|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC000880|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF168716|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF193795|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AK129767|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC017964|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AB578891|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AB618733|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AL136614|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC095446|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	NM_016226|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	NM_057180|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC032462|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AB578892|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)
hg19_v1_chr20_+_1099216_1099490	0.000715716	SOX2.p2	NM_006814|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)	AK098612|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)	AK294134|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)	D88378|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)	HQ258165|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)	AK300667|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)
hg19_v1_chr11_+_117103237_117103629	0.000713154	SOX2.p2	NM_207343|RNF214|257160|ring finger protein 214	AK298923|RNF214|257160|ring finger protein 214	BC064581|RNF214|257160|ring finger protein 214	AK300160|RNF214|257160|ring finger protein 214	BC146891|RNF214|257160|ring finger protein 214	BC146901|RNF214|257160|ring finger protein 214	NM_001077239|RNF214|257160|ring finger protein 214
hg19_v1_chr1_-_155293908_155293976	0.000712167	SOX2.p2	BC080538|RUSC1-AS1|284618|RUSC1 antisense RNA 1 (non-protein coding)	NM_001039517|RUSC1-AS1|284618|RUSC1 antisense RNA 1 (non-protein coding)	BC062571|RUSC1-AS1|284618|RUSC1 antisense RNA 1 (non-protein coding)
hg19_v1_chrX_+_70503512_70503532	0.000709376	SOX2.p2	BC028299|NONO|4841|non-POU domain containing, octamer-binding	BC012141|NONO|4841|non-POU domain containing, octamer-binding	BC025352|NONO|4841|non-POU domain containing, octamer-binding	BC025280|NONO|4841|non-POU domain containing, octamer-binding	BC002364|NONO|4841|non-POU domain containing, octamer-binding
hg19_v1_chr9_-_21994329_21994370	0.000689852	SOX2.p2	BT007020|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)	U26727|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)
hg19_v1_chr17_-_2304217_2304415	0.000687619	SOX2.p2	X96401|MNT|4335|MAX binding protein	NM_020310|MNT|4335|MAX binding protein	AK291596|MNT|4335|MAX binding protein
hg19_v1_chr7_+_44836166_44836268	0.000686206	SOX2.p2	BC137057|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC137058|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	NM_021130|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)
hg19_v1_chr16_+_67876381_67876584	0.000682988	SOX2.p2	L10378|THAP11|57215|THAP domain containing 11	L10379|THAP11|57215|THAP domain containing 11	DQ892600|THAP11|57215|THAP domain containing 11	DQ895831|THAP11|57215|THAP domain containing 11	EF036502|THAP11|57215|THAP domain containing 11
hg19_v1_chr19_+_4007690_4007768	0.000672644	SOX2.p2	BC066895|PIAS4|51588|protein inhibitor of activated STAT, 4	AK022481|PIAS4|51588|protein inhibitor of activated STAT, 4	BC029874|PIAS4|51588|protein inhibitor of activated STAT, 4	NM_015897|PIAS4|51588|protein inhibitor of activated STAT, 4	AK222726|PIAS4|51588|protein inhibitor of activated STAT, 4	AF077952|PIAS4|51588|protein inhibitor of activated STAT, 4	DQ892419|PIAS4|51588|protein inhibitor of activated STAT, 4	DQ895633|PIAS4|51588|protein inhibitor of activated STAT, 4	BC010047|PIAS4|51588|protein inhibitor of activated STAT, 4
hg19_v1_chr22_-_42084819_42084912	0.000671829	SOX2.p2	BC005358|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	AF155235|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	NM_001003796|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)
hg19_v1_chr12_-_95611023_95611450	0.00066495	SOX2.p2	BC125225|FGD6|55785|FYVE, RhoGEF and PH domain containing 6	BC125226|FGD6|55785|FYVE, RhoGEF and PH domain containing 6	BX538322|FGD6|55785|FYVE, RhoGEF and PH domain containing 6	AK124904|FGD6|55785|FYVE, RhoGEF and PH domain containing 6	NM_018351|FGD6|55785|FYVE, RhoGEF and PH domain containing 6
hg19_v1_chr11_+_14926542_14926557	0.000661435	SOX2.p2	AK054728|CALCB|797|calcitonin-related polypeptide beta
hg19_v1_chr15_-_50647275_50647325	0.000648856	SOX2.p2	BC016910|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	D13316|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	BC050702|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	AK303901|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg19_v1_chr6_+_43149905_43149924	0.000647926	SOX2.p2	AK125228|CUL9|23113|cullin 9	CR749511|CUL9|23113|cullin 9	NM_015089|CUL9|23113|cullin 9	CR749841|CUL9|23113|cullin 9
hg19_v1_chr6_-_131949188_131949386	0.00064593	SOX2.p2	AF135022|MED23|9439|mediator complex subunit 23	AM393572|MED23|9439|mediator complex subunit 23	EU832308|MED23|9439|mediator complex subunit 23	EU832392|MED23|9439|mediator complex subunit 23	EU392526|MED23|9439|mediator complex subunit 23	EU392528|MED23|9439|mediator complex subunit 23	EU392529|MED23|9439|mediator complex subunit 23	EU392530|MED23|9439|mediator complex subunit 23	EU392531|MED23|9439|mediator complex subunit 23	AK315030|MED23|9439|mediator complex subunit 23	AF105332|MED23|9439|mediator complex subunit 23	EU392520|MED23|9439|mediator complex subunit 23	EU392522|MED23|9439|mediator complex subunit 23	EU392527|MED23|9439|mediator complex subunit 23	EU392532|MED23|9439|mediator complex subunit 23	BC060759|MED23|9439|mediator complex subunit 23	AF104255|MED23|9439|mediator complex subunit 23	AL136776|MED23|9439|mediator complex subunit 23	AB033042|MED23|9439|mediator complex subunit 23	BC007088|MED23|9439|mediator complex subunit 23	NM_004830|MED23|9439|mediator complex subunit 23	NM_015979|MED23|9439|mediator complex subunit 23
hg19_v1_chr3_-_129158675_129158761	0.00063358	SOX2.p2	AM180876|MBD4|8930|methyl-CpG binding domain protein 4	CR450305|MBD4|8930|methyl-CpG binding domain protein 4	BC034463|MBD4|8930|methyl-CpG binding domain protein 4	BC011752|MBD4|8930|methyl-CpG binding domain protein 4
hg19_v1_chrX_+_119738542_119738583	0.000618888	SOX2.p2	NM_001137554|MCTS1|28985|malignant T cell amplified sequence 1	AK294834|MCTS1|28985|malignant T cell amplified sequence 1
hg19_v1_chr1_-_115300615_115300670	0.000618593	SOX2.p2	NM_001007553|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_001130523|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_001242891|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_001242892|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_001242893|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_007158|CSDE1|7812|cold shock domain containing E1, RNA-binding
hg19_v1_chr17_-_74068582_74068582	0.000586706	SOX2.p2	AK074698|SRP68|6730|signal recognition particle 68kDa
hg19_v1_chr14_+_58906398_58906455	0.000573214	SOX2.p2	AK302579|KIAA0586|9786|KIAA0586	NM_001244193|KIAA0586|9786|KIAA0586	AK310356|KIAA0586|9786|KIAA0586	AK302718|KIAA0586|9786|KIAA0586
hg19_v1_chr14_-_35344080_35344137	0.000572872	SOX2.p2	BC020636|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg19_v1_chr3_+_127771307_127771337	0.000561995	SOX2.p2	AF346602|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)
hg19_v1_chr3_-_156272868_156272895	0.000553154	SOX2.p2	BT006669|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	DQ892572|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	DQ895788|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	AK304364|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	AK312935|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)
hg19_v1_chr17_-_36981552_36981607	0.000552387	SOX2.p2	AK000298|CWC25|54883|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	AK296115|CWC25|54883|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	AK225373|CWC25|54883|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	CR749362|CWC25|54883|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	BC008833|CWC25|54883|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	NM_017748|CWC25|54883|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	AK302983|CWC25|54883|CWC25 spliceosome-associated protein homolog (S. cerevisiae)
hg19_v1_chr8_-_18871163_18871410	0.000547549	SOX2.p2	AK091317|PSD3|23362|pleckstrin and Sec7 domain containing 3	NM_015310|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg19_v1_chr2_-_190649075_190649122	0.000538709	SOX2.p2	AK074756|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	NM_001128150|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	NM_016467|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)
hg19_v1_chr5_+_108084638_108084706	0.000536589	SOX2.p2	AK299855|FER|2241|fer (fps/fes related) tyrosine kinase	BC058030|FER|2241|fer (fps/fes related) tyrosine kinase
hg19_v1_chr14_-_58894217_58894231	0.000528135	SOX2.p2	BC054875|TIMM9|26520|translocase of inner mitochondrial membrane 9 homolog (yeast)	BC020213|TIMM9|26520|translocase of inner mitochondrial membrane 9 homolog (yeast)	NM_012460|TIMM9|26520|translocase of inner mitochondrial membrane 9 homolog (yeast)
hg19_v1_chr19_+_35531409_35531409	0.00051138	SOX2.p2	M18930|HPN|3249|hepsin	NM_002151|HPN|3249|hepsin	NM_182983|HPN|3249|hepsin	X07732|HPN|3249|hepsin
hg19_v1_chr3_-_150264280_150264427	0.000508973	SOX2.p2	AK093929|SERP1|27230|stress-associated endoplasmic reticulum protein 1	AF136975|SERP1|27230|stress-associated endoplasmic reticulum protein 1	AK098135|SERP1|27230|stress-associated endoplasmic reticulum protein 1	AK090933|SERP1|27230|stress-associated endoplasmic reticulum protein 1	NM_014445|SERP1|27230|stress-associated endoplasmic reticulum protein 1
hg19_v1_chr17_+_57697403_57697488	0.000502069	SOX2.p2	
hg19_v1_chr12_+_49741040_49741040	0.000501771	SOX2.p2	BC033236|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22	NM_024902|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22
hg19_v1_chr5_-_88178964_88179049	0.000499621	SOX2.p2	AK312472|MEF2C|4208|myocyte enhancer factor 2C	L08895|MEF2C|4208|myocyte enhancer factor 2C	AK307883|MEF2C|4208|myocyte enhancer factor 2C	BC026341|MEF2C|4208|myocyte enhancer factor 2C
hg19_v1_chr13_+_26828755_26828778	0.000498043	SOX2.p2	BC069634|CDK8|1024|cyclin-dependent kinase 8	BC104492|CDK8|1024|cyclin-dependent kinase 8	BC105950|CDK8|1024|cyclin-dependent kinase 8	BC107601|CDK8|1024|cyclin-dependent kinase 8	NM_001260|CDK8|1024|cyclin-dependent kinase 8	X85753|CDK8|1024|cyclin-dependent kinase 8	AY702976|CDK8|1024|cyclin-dependent kinase 8
hg19_v1_chr4_-_99851785_99851787	0.000497288	SOX2.p2	NM_001130679|EIF4E|1977|eukaryotic translation initiation factor 4E	NM_001968|EIF4E|1977|eukaryotic translation initiation factor 4E	BC035166|EIF4E|1977|eukaryotic translation initiation factor 4E
hg19_v1_chr8_+_133787556_133787610	0.000495224	SOX2.p2	NM_016018|PHF20L1|51105|PHD finger protein 20-like 1	NM_032205|PHF20L1|51105|PHD finger protein 20-like 1	NM_198513|PHF20L1|51105|PHD finger protein 20-like 1
hg19_v1_chr21_+_40817793_40817797	0.000492318	SOX2.p2	NM_001001713|SH3BGR|6450|SH3 domain binding glutamic acid-rich protein
hg19_v1_chr5_+_140800536_140800602	0.000490868	SOX2.p2	NM_018914|PCDHGA11|56105|protocadherin gamma subfamily A, 11	NM_032091|PCDHGA11|56105|protocadherin gamma subfamily A, 11	NM_032092|PCDHGA11|56105|protocadherin gamma subfamily A, 11
hg19_v1_chr17_+_79651042_79651048	0.000482323	SOX2.p2	AK303800|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg19_v1_chr10_-_50732142_50732358	0.000474462	SOX2.p2	BC028954|PGBD3|267004|piggyBac transposable element derived 3	AK074682|PGBD3|267004|piggyBac transposable element derived 3	BC063690|PGBD3|267004|piggyBac transposable element derived 3	NM_170753|PGBD3|267004|piggyBac transposable element derived 3
hg19_v1_chr14_-_22005035_22005336	0.000469349	SOX2.p2	AK293574|SALL2|6297|sal-like 2 (Drosophila)	AK001276|SALL2|6297|sal-like 2 (Drosophila)	BC136528|SALL2|6297|sal-like 2 (Drosophila)	BC136529|SALL2|6297|sal-like 2 (Drosophila)	AK299931|SALL2|6297|sal-like 2 (Drosophila)	X98834|SALL2|6297|sal-like 2 (Drosophila)	AB002358|SALL2|6297|sal-like 2 (Drosophila)	NM_005407|SALL2|6297|sal-like 2 (Drosophila)
hg19_v1_chr3_-_160167600_160167647	0.000466183	SOX2.p2	BC109259|TRIM59|286827|tripartite motif containing 59	BC109260|TRIM59|286827|tripartite motif containing 59	AY159379|TRIM59|286827|tripartite motif containing 59	NM_173084|TRIM59|286827|tripartite motif containing 59
hg19_v1_chr14_-_20922841_20922962	0.000418176	SOX2.p2	AJ271669|OSGEP|55644|O-sialoglycoprotein endopeptidase	CR457232|OSGEP|55644|O-sialoglycoprotein endopeptidase	DQ894806|OSGEP|55644|O-sialoglycoprotein endopeptidase	EU176277|OSGEP|55644|O-sialoglycoprotein endopeptidase	AF052137|OSGEP|55644|O-sialoglycoprotein endopeptidase	AB050442|OSGEP|55644|O-sialoglycoprotein endopeptidase
hg19_v1_chr12_+_50898768_50899031	0.000413952	SOX2.p2	BC075027|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)
hg19_v1_chr12_-_46662709_46662777	0.000413812	SOX2.p2	BC010620|SLC38A1|81539|solute carrier family 38, member 1	BX648676|SLC38A1|81539|solute carrier family 38, member 1
hg19_v1_chr16_+_2563914_2563976	0.00041331	SOX2.p2	BC009290|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg19_v1_chr1_+_25071906_25071960	0.000411617	SOX2.p2	AK315051|CLIC4|25932|chloride intracellular channel 4	AK301466|CLIC4|25932|chloride intracellular channel 4	AK307142|CLIC4|25932|chloride intracellular channel 4
hg19_v1_chr16_-_58663734_58663738	0.000401343	SOX2.p2	AK300281|CNOT1|23019|CCR4-NOT transcription complex, subunit 1	AK056927|CNOT1|23019|CCR4-NOT transcription complex, subunit 1	BX537840|CNOT1|23019|CCR4-NOT transcription complex, subunit 1	EF553522|CNOT1|23019|CCR4-NOT transcription complex, subunit 1	AL832769|CNOT1|23019|CCR4-NOT transcription complex, subunit 1
hg19_v1_chr1_+_20208837_20208891	0.000394879	SOX2.p2	NM_015207|OTUD3|23252|OTU domain containing 3
hg19_v1_chr16_-_58663727_58663731	0.000370309	SOX2.p2	BX647815|CNOT1|23019|CCR4-NOT transcription complex, subunit 1
hg19_v1_chr6_+_122720750_122720882	0.000367418	SOX2.p2	AK225593|HSF2|3298|heat shock transcription factor 2	AK225594|HSF2|3298|heat shock transcription factor 2	BC112323|HSF2|3298|heat shock transcription factor 2	M65217|HSF2|3298|heat shock transcription factor 2	AK294624|HSF2|3298|heat shock transcription factor 2	BC005329|HSF2|3298|heat shock transcription factor 2	BC064622|HSF2|3298|heat shock transcription factor 2	BC121050|HSF2|3298|heat shock transcription factor 2	BC121051|HSF2|3298|heat shock transcription factor 2	BC128420|HSF2|3298|heat shock transcription factor 2	AK316377|HSF2|3298|heat shock transcription factor 2	EU446897|HSF2|3298|heat shock transcription factor 2
hg19_v1_chr11_+_118478305_118478450	0.000364627	SOX2.p2	NM_001144758|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	NM_001144759|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	CR749783|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	BC098586|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AB014538|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AK295819|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AL832373|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AK074070|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AK125783|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1
hg19_v1_chr17_+_2240795_2241009	0.000364616	SOX2.p2	NM_014853|SGSM2|9905|small G protein signaling modulator 2	AB007857|SGSM2|9905|small G protein signaling modulator 2	NM_001098509|SGSM2|9905|small G protein signaling modulator 2	BC039204|SGSM2|9905|small G protein signaling modulator 2	AK294955|SGSM2|9905|small G protein signaling modulator 2	AB275762|SGSM2|9905|small G protein signaling modulator 2	AB449878|SGSM2|9905|small G protein signaling modulator 2	AK304263|SGSM2|9905|small G protein signaling modulator 2
hg19_v1_chr8_-_33457491_33457500	0.00035692	SOX2.p2	AB158288|DUSP26|78986|dual specificity phosphatase 26 (putative)	AK055704|DUSP26|78986|dual specificity phosphatase 26 (putative)
hg19_v1_chr17_-_26697293_26697303	0.000352956	SOX2.p2	BC005046|VTN|7448|vitronectin
hg19_v1_chr2_-_37899227_37899552	0.000349954	SOX2.p2	AL136842|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3	NM_006449|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3
hg19_v1_chr18_-_30352841_30352973	0.000345642	SOX2.p2	BC021267|KLHL14|57565|kelch-like 14 (Drosophila)	AB037805|KLHL14|57565|kelch-like 14 (Drosophila)	NM_020805|KLHL14|57565|kelch-like 14 (Drosophila)
hg19_v1_chr2_+_231729501_231729620	0.000322941	SOX2.p2	NM_001012514|ITM2C|81618|integral membrane protein 2C	NM_001012516|ITM2C|81618|integral membrane protein 2C	NM_030926|ITM2C|81618|integral membrane protein 2C
hg19_v1_chr2_+_70314714_70314723	0.000319074	SOX2.p2	AK314225|PCBP1|5093|poly(rC) binding protein 1
hg19_v1_chr8_+_90770201_90770368	0.000317595	SOX2.p2	AY524045|RIPK2|8767|receptor-interacting serine-threonine kinase 2	AF078530|RIPK2|8767|receptor-interacting serine-threonine kinase 2	AY562996|RIPK2|8767|receptor-interacting serine-threonine kinase 2
hg19_v1_chr22_-_19419215_19419280	0.000309608	SOX2.p2	NM_003325|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)	X75296|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)	X89887|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)	BC032721|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)
hg19_v1_chr10_+_98592015_98592092	0.000308846	SOX2.p2	NM_001170765|LCOR|84458|ligand dependent nuclear receptor corepressor	NM_001170766|LCOR|84458|ligand dependent nuclear receptor corepressor	AL832106|LCOR|84458|ligand dependent nuclear receptor corepressor	BC053359|LCOR|84458|ligand dependent nuclear receptor corepressor
hg19_v1_chr14_-_50100657_50100736	0.000305638	SOX2.p2	BC013322|DNAAF2|55172|dynein, axonemal, assembly factor 2	BX248264|DNAAF2|55172|dynein, axonemal, assembly factor 2	BC011400|DNAAF2|55172|dynein, axonemal, assembly factor 2	AK001425|DNAAF2|55172|dynein, axonemal, assembly factor 2
hg19_v1_chr19_+_41770273_41770281	0.000305473	SOX2.p2	AK022863|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	AK127057|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	AK291762|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	AK308156|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v1_chr20_-_44718517_44718531	0.000287669	SOX2.p2	BC056872|NCOA5|57727|nuclear receptor coactivator 5
hg19_v1_chrX_-_119602846_119603002	0.000279936	SOX2.p2	AK304405|LAMP2|3920|lysosomal-associated membrane protein 2
hg19_v1_chr8_-_124054540_124054541	0.000278447	SOX2.p2	AY358818|DERL1|79139|Der1-like domain family, member 1	AK303826|DERL1|79139|Der1-like domain family, member 1
hg19_v1_chr15_+_40886217_40886233	0.000276771	SOX2.p2	AF173994|CASC5|57082|cancer susceptibility candidate 5	BC043597|CASC5|57082|cancer susceptibility candidate 5
hg19_v1_chr10_+_35484054_35484117	0.000275063	SOX2.p2	D14826|CREM|1390|cAMP responsive element modulator	NM_182717|CREM|1390|cAMP responsive element modulator	NM_182718|CREM|1390|cAMP responsive element modulator	NM_182719|CREM|1390|cAMP responsive element modulator	NM_182720|CREM|1390|cAMP responsive element modulator	AK290612|CREM|1390|cAMP responsive element modulator	AF069065|CREM|1390|cAMP responsive element modulator	U44836|CREM|1390|cAMP responsive element modulator
hg19_v1_chr19_+_41770285_41770328	0.00027268	SOX2.p2	BC009988|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v1_chr9_+_35042222_35042262	0.000270452	SOX2.p2	NM_001040410|C9orf131|138724|chromosome 9 open reading frame 131	NM_203299|C9orf131|138724|chromosome 9 open reading frame 131	BC045643|C9orf131|138724|chromosome 9 open reading frame 131	AK097595|C9orf131|138724|chromosome 9 open reading frame 131	AK302123|C9orf131|138724|chromosome 9 open reading frame 131
hg19_v1_chr1_-_1624145_1624171	0.000268934	SOX2.p2	BC092507|SLC35E2B|728661|solute carrier family 35, member E2B	AK125619|SLC35E2B|728661|solute carrier family 35, member E2B
hg19_v1_chr7_+_101459092_101459327	0.000265135	SOX2.p2	NM_001202543|CUX1|1523|cut-like homeobox 1	NM_001202544|CUX1|1523|cut-like homeobox 1	NM_001202545|CUX1|1523|cut-like homeobox 1	NM_001913|CUX1|1523|cut-like homeobox 1	NM_181500|CUX1|1523|cut-like homeobox 1	AK222832|CUX1|1523|cut-like homeobox 1	AK303151|CUX1|1523|cut-like homeobox 1	NM_001202546|CUX1|1523|cut-like homeobox 1	AK125097|CUX1|1523|cut-like homeobox 1	BC066592|CUX1|1523|cut-like homeobox 1	L12579|CUX1|1523|cut-like homeobox 1	AK297548|CUX1|1523|cut-like homeobox 1	BC012323|CUX1|1523|cut-like homeobox 1	AK122726|CUX1|1523|cut-like homeobox 1	BC025422|CUX1|1523|cut-like homeobox 1
hg19_v1_chrM_-_379_715	0.000262416	SOX2.p2	
hg19_v1_chr19_+_44576266_44576354	0.000253088	SOX2.p2	AY458845|ZNF284|342909|zinc finger protein 284	NM_001037813|ZNF284|342909|zinc finger protein 284	CR936662|ZNF284|342909|zinc finger protein 284
hg19_v1_chr1_-_52343690_52343711	0.000246131	SOX2.p2	AY360265|NRD1|4898|nardilysin (N-arginine dibasic convertase)	AK311631|NRD1|4898|nardilysin (N-arginine dibasic convertase)	NM_001242361|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg19_v1_chr19_+_41770329_41770330	0.000243979	SOX2.p2	AK291315|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v1_chr15_+_50647105_50647215	0.000242522	SOX2.p2	BC014238|LOC100129387|100129387|uncharacterized LOC100129387	BC004103|LOC100129387|100129387|uncharacterized LOC100129387
hg19_v1_chr17_+_79650961_79651022	0.000242026	SOX2.p2	NM_004712|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	AK294190|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	BC003565|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	U43895|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg19_v1_chr19_-_44124013_44124013	0.000238718	SOX2.p2	NM_182498|ZNF428|126299|zinc finger protein 428
hg19_v1_chr1_+_70687004_70687078	0.000237773	SOX2.p2	BC017359|SRSF11|9295|serine/arginine-rich splicing factor 11
hg19_v1_chr14_-_20923266_20923266	0.000237433	SOX2.p2	NM_017807|OSGEP|55644|O-sialoglycoprotein endopeptidase
hg19_v1_chr2_+_185463292_185463319	0.000230726	SOX2.p2	BC142612|ZNF804A|91752|zinc finger protein 804A
hg19_v1_chr6_+_111279762_111279898	0.000228742	SOX2.p2	AF361492|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa	AF361496|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa	NM_138408|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa	BC104655|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa
hg19_v1_chr5_+_140800613_140800794	0.000218913	SOX2.p2	BC136781|PCDHGA11|56105|protocadherin gamma subfamily A, 11	BC171774|PCDHGA11|56105|protocadherin gamma subfamily A, 11	AF152320|PCDHGA11|56105|protocadherin gamma subfamily A, 11	AF152504|PCDHGA11|56105|protocadherin gamma subfamily A, 11	AF152505|PCDHGA11|56105|protocadherin gamma subfamily A, 11
hg19_v1_chr17_-_76124791_76124886	0.000217066	SOX2.p2	AK096076|TMC6|11322|transmembrane channel-like 6	AY099356|TMC6|11322|transmembrane channel-like 6	AY099357|TMC6|11322|transmembrane channel-like 6	AK303584|TMC6|11322|transmembrane channel-like 6	AK310734|TMC6|11322|transmembrane channel-like 6	NM_001127198|TMC6|11322|transmembrane channel-like 6	AK021738|TMC6|11322|transmembrane channel-like 6
hg19_v1_chr2_-_232329064_232329207	0.00021695	SOX2.p2	AK000221|NCL|4691|nucleolin	AK091742|NCL|4691|nucleolin	AK095897|NCL|4691|nucleolin	AK122805|NCL|4691|nucleolin	NM_005381|NCL|4691|nucleolin	AK127608|NCL|4691|nucleolin
hg19_v1_chr4_-_105416050_105416057	0.000208363	SOX2.p2	AK127778|CXXC4|80319|CXXC finger protein 4
hg19_v1_chr14_+_58894709_58894754	0.000207476	SOX2.p2	NM_014749|KIAA0586|9786|KIAA0586	BC066647|KIAA0586|9786|KIAA0586
hg19_v1_chr11_-_66206260_66206313	0.000207266	SOX2.p2	BC108277|MRPL11|65003|mitochondrial ribosomal protein L11	AB049638|MRPL11|65003|mitochondrial ribosomal protein L11	AK290084|MRPL11|65003|mitochondrial ribosomal protein L11	AK223112|MRPL11|65003|mitochondrial ribosomal protein L11	BC005002|MRPL11|65003|mitochondrial ribosomal protein L11	AF151871|MRPL11|65003|mitochondrial ribosomal protein L11	NM_016050|MRPL11|65003|mitochondrial ribosomal protein L11	NM_170738|MRPL11|65003|mitochondrial ribosomal protein L11	NM_170739|MRPL11|65003|mitochondrial ribosomal protein L11
hg19_v1_chr14_+_58894102_58894153	0.000204827	SOX2.p2	AK302836|KIAA0586|9786|KIAA0586	NM_001244189|KIAA0586|9786|KIAA0586	NM_001244190|KIAA0586|9786|KIAA0586	NM_001244191|KIAA0586|9786|KIAA0586	NM_001244192|KIAA0586|9786|KIAA0586	AB011158|KIAA0586|9786|KIAA0586	AK302635|KIAA0586|9786|KIAA0586	AY359881|KIAA0586|9786|KIAA0586
hg19_v1_chr10_+_28822508_28822585	0.000204605	SOX2.p2	AK297460|WAC|51322|WW domain containing adaptor with coiled-coil
hg19_v1_chr16_-_70557430_70557459	0.000196428	SOX2.p2	BC027726|COG4|25839|component of oligomeric golgi complex 4	AB088369|COG4|25839|component of oligomeric golgi complex 4	BC128144|COG4|25839|component of oligomeric golgi complex 4	BC128145|COG4|25839|component of oligomeric golgi complex 4	AK022874|COG4|25839|component of oligomeric golgi complex 4	BC072438|COG4|25839|component of oligomeric golgi complex 4	BX648010|COG4|25839|component of oligomeric golgi complex 4	AK293235|COG4|25839|component of oligomeric golgi complex 4	AK297557|COG4|25839|component of oligomeric golgi complex 4	AK096557|COG4|25839|component of oligomeric golgi complex 4	NM_001195139|COG4|25839|component of oligomeric golgi complex 4	NM_015386|COG4|25839|component of oligomeric golgi complex 4
hg19_v1_chr4_+_39699663_39699946	0.000195749	SOX2.p2	NM_001111112|UBE2K|3093|ubiquitin-conjugating enzyme E2K	NM_001111113|UBE2K|3093|ubiquitin-conjugating enzyme E2K	NM_005339|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AK295846|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AK315524|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AK093533|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AK291454|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AK307130|UBE2K|3093|ubiquitin-conjugating enzyme E2K	BC022804|UBE2K|3093|ubiquitin-conjugating enzyme E2K	BC050600|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AB022435|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AB022436|UBE2K|3093|ubiquitin-conjugating enzyme E2K	U58522|UBE2K|3093|ubiquitin-conjugating enzyme E2K	EU446896|UBE2K|3093|ubiquitin-conjugating enzyme E2K
hg19_v1_chrX_+_47053271_47053296	0.000189873	SOX2.p2	M58028|UBA1|7317|ubiquitin-like modifier activating enzyme 1
hg19_v1_chr16_+_2563993_2563999	0.000188907	SOX2.p2	BC007759|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg19_v1_chr2_+_73114501_73114560	0.000186609	SOX2.p2	NM_003124|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	AK222942|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	M76231|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	BC017310|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	AK291856|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	DQ891699|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	DQ894880|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)
hg19_v1_chr1_-_185125819_185126116	0.000186477	SOX2.p2	AK226103|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AF288399|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK074936|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC045535|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC053961|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC026883|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC035430|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC039738|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK098359|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK312801|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK074993|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	NM_030934|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like
hg19_v1_chr2_+_201676659_201676662	0.000183523	SOX2.p2	AK223245|BZW1|9689|basic leucine zipper and W2 domains 1	BC026303|BZW1|9689|basic leucine zipper and W2 domains 1
hg19_v1_chr9_-_128003348_128003613	0.000181498	SOX2.p2	AF188611|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	AF216292|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	DQ892173|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	DQ895368|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	AJ271729|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	BC020235|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
hg19_v1_chr16_+_2563977_2563986	0.000180686	SOX2.p2	BC007389|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	BC004537|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg19_v1_chr5_+_137688270_137688291	0.000176945	SOX2.p2	AF338242|KDM3B|51780|lysine (K)-specific demethylase 3B	NM_016604|KDM3B|51780|lysine (K)-specific demethylase 3B
hg19_v1_chr9_-_128003615_128003632	0.000175701	SOX2.p2	AK293604|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	X87949|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
hg19_v1_chrX_-_119603136_119603154	0.000174458	SOX2.p2	AK291090|LAMP2|3920|lysosomal-associated membrane protein 2	AK293931|LAMP2|3920|lysosomal-associated membrane protein 2
hg19_v1_chr9_-_35072545_35072569	0.000170544	SOX2.p2	BC121794|VCP|7415|valosin containing protein	BC122550|VCP|7415|valosin containing protein	BC110913|VCP|7415|valosin containing protein	AF100752|VCP|7415|valosin containing protein
hg19_v1_chrX_-_130423034_130423034	0.000165819	SOX2.p2	BC028312|IGSF1|3547|immunoglobulin superfamily, member 1	NM_001170963|IGSF1|3547|immunoglobulin superfamily, member 1
hg19_v1_chr7_-_130353579_130353611	0.000165762	SOX2.p2	AK291409|COPG2|26958|coatomer protein complex, subunit gamma 2	NM_012133|COPG2|26958|coatomer protein complex, subunit gamma 2
hg19_v1_chr5_-_134735565_134735581	0.00016095	SOX2.p2	BC013331|H2AFY|9555|H2A histone family, member Y	AF054174|H2AFY|9555|H2A histone family, member Y	NM_004893|H2AFY|9555|H2A histone family, member Y
hg19_v1_chr1_+_20208908_20208920	0.000150204	SOX2.p2	AB007928|OTUD3|23252|OTU domain containing 3
hg19_v1_chr4_+_106067754_106067869	0.00014412	SOX2.p2	NM_001127208|TET2|54790|tet methylcytosine dioxygenase 2
hg19_v1_chr17_-_74068522_74068575	0.000142291	SOX2.p2	AL512708|SRP68|6730|signal recognition particle 68kDa	AF195951|SRP68|6730|signal recognition particle 68kDa
hg19_v1_chr11_-_27723061_27723179	0.000102037	SOX2.p2	AB038672|BDNF|627|brain-derived neurotrophic factor	AY054397|BDNF|627|brain-derived neurotrophic factor	BC029795|BDNF|627|brain-derived neurotrophic factor	EF674521|BDNF|627|brain-derived neurotrophic factor	NM_170733|BDNF|627|brain-derived neurotrophic factor
hg19_v1_chr10_+_93558182_93558197	0.000101468	SOX2.p2	AK314612|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	AF309033|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
hg19_v1_chrX_-_154842492_154842621	9.59832e-05	SOX2.p2	AF373407|TMLHE|55217|trimethyllysine hydroxylase, epsilon	BC025269|TMLHE|55217|trimethyllysine hydroxylase, epsilon	BC009673|TMLHE|55217|trimethyllysine hydroxylase, epsilon	AK291694|TMLHE|55217|trimethyllysine hydroxylase, epsilon	AK001589|TMLHE|55217|trimethyllysine hydroxylase, epsilon	NM_001184797|TMLHE|55217|trimethyllysine hydroxylase, epsilon	NM_018196|TMLHE|55217|trimethyllysine hydroxylase, epsilon
hg19_v1_chr6_+_28249313_28249487	9.38418e-05	SOX2.p2	NM_001184743|PGBD1|84547|piggyBac transposable element derived 1	NM_032507|PGBD1|84547|piggyBac transposable element derived 1	AK223446|PGBD1|84547|piggyBac transposable element derived 1	AK291228|PGBD1|84547|piggyBac transposable element derived 1	BC032507|PGBD1|84547|piggyBac transposable element derived 1	BC040117|PGBD1|84547|piggyBac transposable element derived 1	BC128585|PGBD1|84547|piggyBac transposable element derived 1	BC069033|PGBD1|84547|piggyBac transposable element derived 1
hg19_v1_chr5_+_34656367_34656459	9.29319e-05	SOX2.p2	NM_001145522|RAI14|26064|retinoic acid induced 14	NM_015577|RAI14|26064|retinoic acid induced 14
hg19_v1_chr15_-_73925555_73925617	8.93779e-05	SOX2.p2	HQ258139|NPTN|27020|neuroplastin	BC117462|NPTN|27020|neuroplastin	BC143880|NPTN|27020|neuroplastin	BC143881|NPTN|27020|neuroplastin	AK313441|NPTN|27020|neuroplastin	AK314248|NPTN|27020|neuroplastin	BC030773|NPTN|27020|neuroplastin	CR936779|NPTN|27020|neuroplastin	AK304478|NPTN|27020|neuroplastin	AK297184|NPTN|27020|neuroplastin
hg19_v1_chr9_+_131644368_131644398	8.57765e-05	SOX2.p2	NM_001127245|LRRC8A|56262|leucine rich repeat containing 8 family, member A	NM_019594|LRRC8A|56262|leucine rich repeat containing 8 family, member A
hg19_v1_chr14_+_23563888_23563979	8.09738e-05	SOX2.p2	AK024794|C14orf119|55017|chromosome 14 open reading frame 119
hg19_v1_chr3_-_111851967_111852151	8.04415e-05	SOX2.p2	BC030506|GCET2|257144|germinal center expressed transcript 2	AY212246|GCET2|257144|germinal center expressed transcript 2	AK313368|GCET2|257144|germinal center expressed transcript 2	AF521911|GCET2|257144|germinal center expressed transcript 2	NM_001190259|GCET2|257144|germinal center expressed transcript 2	NM_001190260|GCET2|257144|germinal center expressed transcript 2	NM_152785|GCET2|257144|germinal center expressed transcript 2
hg19_v1_chr17_+_58677489_58677599	6.48269e-05	SOX2.p2	BC060877|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	NM_003620|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	AK312902|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	AK299773|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	U78305|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D
hg19_v1_chr15_-_57210672_57210801	6.41215e-05	SOX2.p2	AK096657|LOC145783|145783|uncharacterized LOC145783
hg19_v1_chr6_-_88411984_88411992	5.58633e-05	SOX2.p2	AK001204|AKIRIN2|55122|akirin 2	NM_018064|AKIRIN2|55122|akirin 2
hg19_v1_chr18_+_20715726_20715726	5.1549e-05	SOX2.p2	EF028204|CABLES1|91768|Cdk5 and Abl enzyme substrate 1	NM_001100619|CABLES1|91768|Cdk5 and Abl enzyme substrate 1
hg19_v1_chr19_+_44100734_44100787	4.7626e-05	SOX2.p2	NM_001145347|ZNF576|79177|zinc finger protein 576	BC002981|ZNF576|79177|zinc finger protein 576
hg19_v1_chr3_+_38263076_38263090	3.8582e-05	SOX2.p2	AF087893|OXSR1|9943|oxidative-stress responsive 1
hg19_v1_chr11_+_111411232_111411232	3.14211e-05	SOX2.p2	AK055539|LAYN|143903|layilin	NM_178834|LAYN|143903|layilin
hg19_v1_chr19_+_57791794_57791981	2.562e-05	SOX2.p2	AK292144|ZNF460|10794|zinc finger protein 460	NM_006635|ZNF460|10794|zinc finger protein 460	AK074582|ZNF460|10794|zinc finger protein 460	AY329492|ZNF460|10794|zinc finger protein 460
hg19_v1_chr11_+_33037727_33037727	2.06241e-05	SOX2.p2	AF447588|DEPDC7|91614|DEP domain containing 7	NM_139160|DEPDC7|91614|DEP domain containing 7
hg19_v1_chr9_-_36400212_36400295	1.75595e-05	SOX2.p2	AL136817|RNF38|152006|ring finger protein 38	BC033786|RNF38|152006|ring finger protein 38	NM_022781|RNF38|152006|ring finger protein 38	NM_194329|RNF38|152006|ring finger protein 38
hg19_v1_chr5_+_180650274_180650289	4.91574e-06	SOX2.p2	AK027601|TRIM41|90933|tripartite motif containing 41	AX775793|TRIM41|90933|tripartite motif containing 41	AX775799|TRIM41|90933|tripartite motif containing 41	AX775801|TRIM41|90933|tripartite motif containing 41
hg19_v1_chr3_-_195310985_195311075	4.58016e-06	SOX2.p2	NM_001647|APOD|347|apolipoprotein D
hg19_v1_chr17_-_74068576_74068577	4.18829e-06	SOX2.p2	BC020238|SRP68|6730|signal recognition particle 68kDa	AK301100|SRP68|6730|signal recognition particle 68kDa
hg19_v1_chr17_-_42264075_42264107	4.69147e-07	SOX2.p2	NM_178542|C17orf65|339201|chromosome 17 open reading frame 65
