Motif ID: LHX3,4.p2

Z-value: 0.747


Transcription factors associated with LHX3,4.p2:

Gene SymbolEntrez IDGene Name
LHX3 8022 LIM homeobox 3
LHX4 89884 LIM homeobox 4

Activity-expression correlation:

Gene SymbolPromoterPearson corr. coef.P-valuePlot
LHX4hg19_v1_chr1_+_180199432_1801994410.166.8e-01Click!


Activity profile for motif LHX3,4.p2.

activity profile for motif LHX3,4.p2


Sorted Z-values histogram for motif LHX3,4.p2

Sorted Z-values for motif LHX3,4.p2



Network of associatons between targets according to the STRING database.



First level regulatory network of LHX3,4.p2

PNG image of the network

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Top targets:


Promoter Score Refseq Gene Symbol Gene Name
chr12_-_10282680 0.765 NM_022570
NM_197947
NM_197948
NM_197949
NM_197950
NM_197954
CLEC7A





C-type lectin domain family 7, member A





chr2_-_99871569 0.725 NM_175735
LYG2
lysozyme G-like 2
chrX_-_102531673 0.696 NM_001012979
TCEAL5
transcription elongation factor A (SII)-like 5
chr8_+_32785485 0.661


chr12_+_109551041 0.641


chr1_+_43253660 0.498 NM_001242750
LOC100129924
uncharacterized LOC100129924
chr2_+_27719702 0.495 NM_001486
GCKR
glucokinase (hexokinase 4) regulator
chr4_+_88896838 0.490 SPP1
secreted phosphoprotein 1
chr4_+_88896868 0.472 SPP1
secreted phosphoprotein 1
chr3_+_151591428 0.456 NM_033050
SUCNR1
succinate receptor 1
chr10_+_91152321 0.449 NM_001548
IFIT1
interferon-induced protein with tetratricopeptide repeats 1
chr5_+_147691988 0.410 NM_032566
SPINK7
serine peptidase inhibitor, Kazal type 7 (putative)
chr12_+_54410893 0.407 HOXC5
HOXC6
homeobox C5
homeobox C6
chr15_+_34261088 0.403 NM_012125
CHRM5
cholinergic receptor, muscarinic 5
chr4_+_88896899 0.381 SPP1
secreted phosphoprotein 1
chr10_+_102222797 0.358 NM_003393
WNT8B
wingless-type MMTV integration site family, member 8B
chr3_-_57234279 0.346 NM_003865
HESX1
HESX homeobox 1
chrM_+_10123 0.343


chr10_+_695887 0.339 C10orf108
chromosome 10 open reading frame 108
chr7_-_107880492 0.334 NM_001037132
NRCAM
neuronal cell adhesion molecule
chr3_+_73110809 0.316 NM_018029
EBLN2
endogenous Bornavirus-like nucleoprotein 2
chr9_-_215892 0.302 NM_152569
C9orf66
chromosome 9 open reading frame 66
chr2_+_177016112 0.300 NM_014621
HOXD4
homeobox D4
chr20_-_34117447 0.295 NM_001145350
C20orf173
chromosome 20 open reading frame 173
chr4_+_88896801 0.282 NM_000582
NM_001040058
NM_001040060
NM_001251829
NM_001251830
SPP1




secreted phosphoprotein 1




chr14_-_61115906 0.280 NM_005982
SIX1
SIX homeobox 1
chr12_-_16760935 0.270 NM_001001395
NM_001243609
LMO3

LIM domain only 3 (rhombotin-like 2)

chr17_+_74463629 0.262 NM_001088
AANAT
aralkylamine N-acetyltransferase
chrX_-_24690740 0.255 NM_001163264
PCYT1B
phosphate cytidylyltransferase 1, choline, beta
chr5_-_137475076 0.248 NM_003551
NME5
non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)
chr1_+_244214576 0.245 ZNF238
zinc finger protein 238
chr5_+_59784004 0.244 PART1
prostate androgen-regulated transcript 1 (non-protein coding)
chr11_+_99426872 0.237 NM_175566
CNTN5
contactin 5
chr12_-_10021932 0.237 CLEC2B
C-type lectin domain family 2, member B
chr5_+_36608430 0.225 NM_001166695
SLC1A3
solute carrier family 1 (glial high affinity glutamate transporter), member 3
chr6_-_167797917 0.222 NM_004610
TCP10
t-complex 10 homolog (mouse)
chr6_+_26440699 0.216 NM_001242803
NM_006994
NM_197974
BTN3A3


butyrophilin, subfamily 3, member A3


chr1_-_232651227 0.216 NM_020808
SIPA1L2
signal-induced proliferation-associated 1 like 2
chr5_-_95158365 0.216 GLRX
glutaredoxin (thioltransferase)
chr19_-_36304200 0.214 NM_021232
PRODH2
proline dehydrogenase (oxidase) 2
chr5_+_36606667 0.214 SLC1A3
solute carrier family 1 (glial high affinity glutamate transporter), member 3
chr2_-_175462428 0.211 WIPF1
WAS/WASL interacting protein family, member 1
chr6_-_24583454 0.210 NM_001252328
KIAA0319
KIAA0319
chr1_-_93342706 0.206 NM_001252271
FAM69A
family with sequence similarity 69, member A
chr5_+_140792507 0.205 NM_018913
NM_032090
PCDHGA10

protocadherin gamma subfamily A, 10

chr3_+_113616317 0.201 NM_001172105
GRAMD1C
GRAM domain containing 1C
chr2_-_99279935 0.201 NM_001160154
MGAT4A
mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
chr7_-_14025826 0.201 NM_001163150
NM_001163151
NM_001163152
ETV1


ets variant 1


chr12_-_53600999 0.200 NM_000889
ITGB7
integrin, beta 7
chr6_+_31496738 0.199 NM_001011700
MCCD1
mitochondrial coiled-coil domain 1
chr1_+_244216506 0.197 NM_006352
ZNF238
zinc finger protein 238
chr5_+_140557370 0.196 NM_019120
PCDHB8
protocadherin beta 8
chr3_-_195310985 0.190 NM_001647
APOD
apolipoprotein D
chr6_+_49518112 0.181 NM_001145652
C6orf141
chromosome 6 open reading frame 141
chrX_+_70765479 0.179 OGT
O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
chr8_-_62602285 0.178 NM_001164750
NM_001164751
NM_001164752
NM_001164753
NM_020164
NM_032467
NM_032468
ASPH






aspartate beta-hydroxylase






chr6_+_136172802 0.177 NM_018945
PDE7B
phosphodiesterase 7B
chrM_-_379 0.176


chr2_+_207406815 0.175 ADAM23
ADAM metallopeptidase domain 23
chr16_-_67517715 0.175 NM_001138
AGRP
agouti related protein homolog (mouse)
chrX_-_13835187 0.174 GPM6B
glycoprotein M6B
chr6_+_139349818 0.172 NM_021243
C6orf115
chromosome 6 open reading frame 115
chr4_-_23891608 0.170 NM_013261
PPARGC1A
peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
chr2_+_210444364 0.169 NM_002374
NM_031845
NM_031847
MAP2


microtubule-associated protein 2


chr16_-_71610948 0.168 NM_000353
TAT
tyrosine aminotransferase
chr3_-_195310770 0.167 APOD
apolipoprotein D
chr8_-_102803196 0.165 NCALD
neurocalcin delta
chr4_+_41614911 0.164 NM_001112719
NM_001112720
LIMCH1

LIM and calponin homology domains 1

chrX_-_13835313 0.161 NM_001001995
NM_001001996
NM_005278
GPM6B


glycoprotein M6B


chr1_+_81771844 0.161 LPHN2
latrophilin 2
chr8_+_92261515 0.158 NM_052832
NM_134266
SLC26A7

solute carrier family 26, member 7

chr22_+_44395090 0.157 NM_001003828
PARVB
parvin, beta
chr2_-_224866616 0.156 SERPINE2
serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2
chr5_+_36606456 0.156 NM_001166696
NM_004172
SLC1A3

solute carrier family 1 (glial high affinity glutamate transporter), member 3

chr20_-_18477811 0.155 NM_006606
RBBP9
retinoblastoma binding protein 9
chr4_+_186990308 0.154 NM_003265
TLR3
toll-like receptor 3
chr8_+_9953061 0.153 NM_001135671
NM_001199729
MSRA

methionine sulfoxide reductase A

chr2_+_177016337 0.150


chr9_+_118916069 0.149 NM_002581
PAPPA
pregnancy-associated plasma protein A, pappalysin 1
chr1_+_244214552 0.147 NM_205768
ZNF238
zinc finger protein 238
chr1_-_190446701 0.146 NM_199051
FAM5C
family with sequence similarity 5, member C
chr19_-_36303724 0.143 PRODH2
proline dehydrogenase (oxidase) 2
chr14_-_71001731 0.142 NM_003814
ADAM20
ADAM metallopeptidase domain 20
chr3_-_64211111 0.142 NM_198859
PRICKLE2
prickle homolog 2 (Drosophila)
chr6_-_64029847 0.139 NM_001143940
NM_016571
LGSN

lengsin, lens protein with glutamine synthetase domain

chr3_+_82035288 0.139


chr5_+_71502700 0.138 MAP1B
microtubule-associated protein 1B
chr9_-_95298251 0.138 NM_001197295
NM_001197296
NM_001393
ECM2


extracellular matrix protein 2, female organ and adipocyte specific


chr14_+_75898836 0.138 NM_001135049
JDP2
Jun dimerization protein 2
chr5_-_111093792 0.137 NM_001142477
NM_001142476
C5orf13

chromosome 5 open reading frame 13

chr6_+_31583766 0.134 NM_032955
AIF1
allograft inflammatory factor 1
chrX_+_36254050 0.133 NM_001098843
CXorf30
chromosome X open reading frame 30
chr6_+_26402464 0.133 NM_001145008
NM_001145009
NM_007048
NM_194441
BTN3A1



butyrophilin, subfamily 3, member A1



chr5_+_150399980 0.132 NM_002084
GPX3
glutathione peroxidase 3 (plasma)
chr11_-_118123001 0.132 NM_198275
MPZL3
myelin protein zero-like 3
chr5_+_140729723 0.132 NM_018922
NM_032095
PCDHGB1

protocadherin gamma subfamily B, 1

chr11_-_124973204 0.131 NM_001080546
TMEM218
transmembrane protein 218
chr5_+_96212167 0.130 ERAP2
endoplasmic reticulum aminopeptidase 2
chr8_+_98703361 0.130 MTDH
metadherin
chr14_-_74025643 0.129 NM_001220484
NM_203309
HEATR4

HEAT repeat containing 4

chr17_-_39092714 0.128 KRT23
keratin 23 (histone deacetylase inducible)
chr2_-_158300517 0.125 NM_004288
CYTIP
cytohesin 1 interacting protein
chr13_+_24463006 0.125 NM_001014442
C1QTNF9B-AS1
C1QTNF9B antisense RNA 1 (non-protein coding)
chr21_-_36231794 0.125 RUNX1
runt-related transcription factor 1
chr14_+_29236171 0.125 NM_005249
FOXG1
forkhead box G1
chr10_+_5238756 0.123 NM_001818
AKR1C4
aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)
chr22_+_23487512 0.122 NM_004914
RAB36
RAB36, member RAS oncogene family
chrX_-_115594136 0.122 NM_001017978
CXorf61
chromosome X open reading frame 61
chr1_-_217113007 0.120 NM_001243512
NM_001243513
NM_001243510
NM_001243511
ESRRG



estrogen-related receptor gamma



chr6_+_130339715 0.120 NM_001007102
NM_032438
L3MBTL3

l(3)mbt-like 3 (Drosophila)

chr10_+_102732285 0.119 NM_001203244
NM_017893
SEMA4G

sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G

chrX_-_107682600 0.117 NM_001847
COL4A6
collagen, type IV, alpha 6
chr12_+_58003962 0.117 NM_001111270
ARHGEF25
Rho guanine nucleotide exchange factor (GEF) 25
chr10_-_52008312 0.117 NM_001143974
NM_019893
ASAH2

N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2

chr5_+_140529619 0.116 NM_018939
PCDHB6
protocadherin beta 6
chr8_+_107738239 0.116 NM_001198534
NM_001198535
OXR1

oxidation resistance 1

chr1_+_63063186 0.114 NM_014495
ANGPTL3
angiopoietin-like 3
chrX_-_21776158 0.114 NM_014332
SMPX
small muscle protein, X-linked
chr3_+_149192367 0.113 NM_004617
TM4SF4
transmembrane 4 L six family member 4
chr21_-_36252872 0.112 RUNX1
runt-related transcription factor 1
chr3_+_194207685 0.112 FLJ34208
uncharacterized LOC401106
chrX_-_13835012 0.112 GPM6B
glycoprotein M6B
chrX_+_100354797 0.111 NM_006733
CENPI
centromere protein I
chr1_-_53608120 0.107 NM_006671
SLC1A7
solute carrier family 1 (glutamate transporter), member 7
chr19_+_15838833 0.107 NM_013939
OR10H2
olfactory receptor, family 10, subfamily H, member 2
chr2_+_68961912 0.106 NM_001007231
NM_001166277
ARHGAP25

Rho GTPase activating protein 25

chr2_-_200213802 0.106 SATB2
SATB homeobox 2
chr12_+_57157091 0.106 NM_003725
HSD17B6
hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse)
chr4_+_166131170 0.104 NM_001161521
NM_001161522
KLHL2

kelch-like 2, Mayven (Drosophila)

chr17_-_39093671 0.102 NM_015515
KRT23
keratin 23 (histone deacetylase inducible)
chr19_+_49199227 0.101 NM_000511
NM_001097638
FUT2

fucosyltransferase 2 (secretor status included)

chr6_-_32908583 0.100 NM_002118
HLA-DMB
major histocompatibility complex, class II, DM beta
chr2_-_134179325 0.099 NCKAP5
NCK-associated protein 5
chr12_-_26277807 0.097 NM_030762
BHLHE41
basic helix-loop-helix family, member e41
chr12_-_10978867 0.097 NM_023921
TAS2R10
taste receptor, type 2, member 10
chr2_+_202047620 0.096 NM_001206524
NM_001206542
NM_001230
NM_032974
NM_032976
NM_032977
CASP10





caspase 10, apoptosis-related cysteine peptidase





chr7_-_64023454 0.095 NM_001130022
NM_178558
ZNF680

zinc finger protein 680

chr4_+_169418167 0.095 NM_001166108
NM_016081
PALLD

palladin, cytoskeletal associated protein

chr9_+_12693385 0.095 NM_000550
TYRP1
tyrosinase-related protein 1
chr4_+_22694547 0.094 NM_001128432
NM_020973
GBA3

glucosidase, beta, acid 3 (cytosolic)

chr6_+_26087447 0.094 NM_000410
NM_139003
NM_139004
NM_139006
NM_139007
NM_139008
NM_139009
NM_139010
NM_139011
HFE








hemochromatosis








chr3_-_186262114 0.093 NM_017541
CRYGS
crystallin, gamma S
chr5_+_166711842 0.091 NM_001122679
ODZ2
odz, odd Oz/ten-m homolog 2 (Drosophila)
chr1_+_171217632 0.091 NM_002021
FMO1
flavin containing monooxygenase 1
chr6_-_24719286 0.090 NM_030939
C6orf62
chromosome 6 open reading frame 62
chr11_-_5701371 0.089 TRIM5
tripartite motif containing 5
chr13_-_99910548 0.089 NM_001098200
NM_005292
GPR18

G protein-coupled receptor 18

chr21_-_27372461 0.088 APP
amyloid beta (A4) precursor protein
chr6_+_131894343 0.088 NM_000045
NM_001244438
ARG1

arginase, liver

chr8_+_22210311 0.087 PIWIL2
piwi-like 2 (Drosophila)
chr12_+_75784878 0.087 NM_152436
GLIPR1L2
GLI pathogenesis-related 1 like 2
chr6_+_114178516 0.087 NM_002356
MARCKS
myristoylated alanine-rich protein kinase C substrate
chr20_-_6104056 0.086 NM_017671
FERMT1
fermitin family member 1
chr9_+_124329398 0.086 NM_032552
DAB2IP
DAB2 interacting protein
chr1_-_94147201 0.086 NM_003567
BCAR3
breast cancer anti-estrogen resistance 3
chr5_-_95158465 0.084 NM_001118890
NM_001243658
NM_001243659
NM_002064
GLRX



glutaredoxin (thioltransferase)



chr3_+_186739643 0.084 NM_003032
ST6GAL1
ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
chr10_+_18689512 0.084 NM_201570
CACNB2
calcium channel, voltage-dependent, beta 2 subunit
chr1_+_192127591 0.083 NM_130782
RGS18
regulator of G-protein signaling 18
chr6_-_47253962 0.082 TNFRSF21
tumor necrosis factor receptor superfamily, member 21
chr12_+_18414473 0.081 NM_004570
PIK3C2G
phosphoinositide-3-kinase, class 2, gamma polypeptide
chr2_+_202047803 0.079 CASP10
caspase 10, apoptosis-related cysteine peptidase
chr11_-_76998462 0.078 NM_182833
GDPD4
glycerophosphodiester phosphodiesterase domain containing 4
chrX_+_100224696 0.077 NM_001012990
NM_001162490
NM_001162491
ARL13A


ADP-ribosylation factor-like 13A


chr9_+_79093256 0.077 NM_001097635
GCNT1
glucosaminyl (N-acetyl) transferase 1, core 2
chr3_+_136649316 0.077 NM_001190796
NCK1
NCK adaptor protein 1
chr18_+_28956739 0.075 NM_001134453
NM_177986
DSG4

desmoglein 4

chr2_-_167343477 0.075 NM_002976
SCN7A
sodium channel, voltage-gated, type VII, alpha
chr4_+_41614933 0.074 LIMCH1
LIM and calponin homology domains 1
chr3_-_168865521 0.074 NM_001164000
MECOM
MDS1 and EVI1 complex locus
chr8_-_108510094 0.073 NM_001146
NM_001199859
ANGPT1

angiopoietin 1

chr10_+_17270257 0.073 NM_003380
VIM
vimentin
chr12_-_56756526 0.073 NM_001638
APOF
apolipoprotein F
chr4_-_146859960 0.072


chrX_-_24665225 0.072 PCYT1B
phosphate cytidylyltransferase 1, choline, beta
chr4_+_41614725 0.071 LIMCH1
LIM and calponin homology domains 1
chrX_+_41548225 0.070 NM_001097579
NM_005300
GPR34

G protein-coupled receptor 34

chr8_+_132991171 0.070 EFR3A
EFR3 homolog A (S. cerevisiae)
chr13_+_50760015 0.069


chr7_+_77469446 0.069 NM_001127357
NM_001127359
NM_020432
PHTF2


putative homeodomain transcription factor 2


chr12_+_26348488 0.068 NM_005086
SSPN
sarcospan (Kras oncogene-associated gene)
chr5_+_140247767 0.068 NM_018902
NM_031861
PCDHA11

protocadherin alpha 11

chr12_+_131438451 0.068 NM_198827
GPR133
G protein-coupled receptor 133
chr12_+_64798050 0.067 NM_007235
XPOT
exportin, tRNA (nuclear export receptor for tRNAs)
chr17_-_67057046 0.067 NM_080283
ABCA9
ATP-binding cassette, sub-family A (ABC1), member 9
chr1_+_97260515 0.066


chr8_-_102803438 0.066 NM_032041
NCALD
neurocalcin delta
chr3_-_129599220 0.066 NM_001017395
TMCC1
transmembrane and coiled-coil domain family 1
chr12_-_58135853 0.066 NM_014770
AGAP2
ArfGAP with GTPase domain, ankyrin repeat and PH domain 2
chr2_+_88047603 0.066 NM_002665
NM_001032392
PLGLB2
PLGLB1
plasminogen-like B2
plasminogen-like B1
chr3_+_159943252 0.066 NM_001168214
C3orf80
chromosome 3 open reading frame 80
chr1_-_144997110 0.065 NM_001195260
PDE4DIP
phosphodiesterase 4D interacting protein
chr6_-_53013581 0.065 NM_003643
GCM1
glial cells missing homolog 1 (Drosophila)
chr2_+_166326156 0.065 NM_001172173
CSRNP3
cysteine-serine-rich nuclear protein 3
chr13_-_34250899 0.065 NM_001243476
STARD13
StAR-related lipid transfer (START) domain containing 13
chr20_+_5987897 0.065 NM_001127458
CRLS1
cardiolipin synthase 1
chr2_-_288181 0.064 NM_001002919
FAM150B
family with sequence similarity 150, member B
chr8_-_124749573 0.064 NM_001003954
NM_004306
ANXA13

annexin A13

chr4_-_46125929 0.064 NM_173536
GABRG1
gamma-aminobutyric acid (GABA) A receptor, gamma 1
chr5_-_58882274 0.064 NM_006203
PDE4D
phosphodiesterase 4D, cAMP-specific

Gene Ontology Analysis

Nothing significant found in process category.

Nothing significant found in compartment category.

Nothing significant found in function category.