Motif ID: RFX1..5_RFXANK_RFXAP.p2

Z-value: 1.348


Transcription factors associated with RFX1..5_RFXANK_RFXAP.p2:

Gene SymbolEntrez IDGene Name
RFX1 5989 regulatory factor X, 1 (influences HLA class II expression)
RFX2 5990 regulatory factor X, 2 (influences HLA class II expression)
RFX3 5991 regulatory factor X, 3 (influences HLA class II expression)
RFX4 5992 regulatory factor X, 4 (influences HLA class II expression)
RFX5 5993 regulatory factor X, 5 (influences HLA class II expression)
RFXANK 8625 regulatory factor X-associated ankyrin-containing protein
RFXAP 5994 regulatory factor X-associated protein

Activity-expression correlation:

Gene SymbolPromoterPearson corr. coef.P-valuePlot
RFXAPhg19_v1_chr13_+_37393306_373934930.731.0e-01Click!
RFXANKhg19_v1_chr19_+_19303732_19303772-0.542.6e-01Click!
RFX1hg19_v1_chr19_-_14116875_14116953-0.493.3e-01Click!
RFX2hg19_v1_chr19_-_6110491_61105550.404.3e-01Click!
RFX3hg19_v1_chr9_-_3525973_35260350.187.3e-01Click!
RFX5hg19_v1_chr1_-_151319717_1513197690.187.3e-01Click!


Activity profile for motif RFX1..5_RFXANK_RFXAP.p2.

activity profile for motif RFX1..5_RFXANK_RFXAP.p2


Sorted Z-values histogram for motif RFX1..5_RFXANK_RFXAP.p2

Sorted Z-values for motif RFX1..5_RFXANK_RFXAP.p2



Network of associatons between targets according to the STRING database.



First level regulatory network of RFX1..5_RFXANK_RFXAP.p2

PNG image of the network

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Top targets:


Promoter Score Refseq Gene Symbol Gene Name
chr14_+_105941061 1.249 NM_001312
CRIP2
cysteine-rich protein 2
chr5_+_34839268 1.177 NM_144725
TTC23L
tetratricopeptide repeat domain 23-like
chr15_+_40075106 0.889


chr3_-_27410852 0.747 NM_199347
NEK10
NIMA (never in mitosis gene a)- related kinase 10
chr2_+_27193448 0.606 NM_012326
MAPRE3
microtubule-associated protein, RP/EB family, member 3
chr3_-_196439067 0.595 NM_032898
CEP19
centrosomal protein 19kDa
chr6_-_84937313 0.574 NM_014895
KIAA1009
KIAA1009
chr3_-_197676755 0.557 NM_001134435
IQCG
IQ motif containing G
chr11_+_111808017 0.547 DIXDC1
DIX domain containing 1
chr16_+_57728711 0.542 NM_032269
CCDC135
coiled-coil domain containing 135
chr1_+_155147051 0.528 TRIM46
tripartite motif containing 46
chr1_-_169396654 0.524 NM_021179
C1orf114
chromosome 1 open reading frame 114
chr15_+_90777463 0.497 NM_001013657
C15orf58
chromosome 15 open reading frame 58
chr1_+_161068150 0.493 NM_001007255
NM_152366
KLHDC9

kelch domain containing 9

chr3_-_12200339 0.475 TIMP4
TIMP metallopeptidase inhibitor 4
chr17_-_8079607 0.474 NM_032354
NM_183065
TMEM107

transmembrane protein 107

chr7_-_102920665 0.473 DPY19L2P2
dpy-19-like 2 pseudogene 2 (C. elegans)
chr16_+_8806825 0.471 NM_000663
ABAT
4-aminobutyrate aminotransferase
chr21_+_46707949 0.463 LOC642852
uncharacterized LOC642852
chr1_-_74663827 0.450 NM_001105659
LRRIQ3
leucine-rich repeats and IQ motif containing 3
chr2_-_178483372 0.449 TTC30A
tetratricopeptide repeat domain 30A
chr12_-_89746244 0.449 NM_001946
NM_022652
DUSP6

dual specificity phosphatase 6

chr6_-_116575170 0.447 NM_021648
TSPYL4
TSPY-like 4
chr7_-_102715171 0.442 NM_001111038
FBXL13
F-box and leucine-rich repeat protein 13
chr3_-_137832321 0.441 NM_001170538
DZIP1L
DAZ interacting protein 1-like
chr10_+_134145639 0.438 NM_001143757
LRRC27
leucine rich repeat containing 27
chr10_+_25305507 0.437 NM_024838
THNSL1
threonine synthase-like 1 (S. cerevisiae)
chr6_-_24645955 0.436 NM_001168375
NM_001168376
NM_001168374
NM_001168377
NM_014809
KIAA0319




KIAA0319




chr15_+_56657615 0.418 NM_198524
TEX9
testis expressed 9
chr1_+_55271735 0.417 NM_001110533
NM_152607
C1orf177

chromosome 1 open reading frame 177

chr17_+_42081913 0.412 NM_153006
NAGS
N-acetylglutamate synthase
chr21_-_36259408 0.408 RUNX1
runt-related transcription factor 1
chr12_-_89746238 0.407 DUSP6
dual specificity phosphatase 6
chr11_-_82904680 0.395 DKFZp547G183
uncharacterized LOC55525
chr1_-_32687939 0.383 TMEM234
transmembrane protein 234
chr6_+_112408673 0.381 NM_001033564
C6orf225
chromosome 6 open reading frame 225
chr19_+_4910339 0.375 NM_013282
UHRF1
ubiquitin-like with PHD and ring finger domains 1
chr12_-_89745997 0.373 DUSP6
dual specificity phosphatase 6
chr7_+_100797685 0.358 NM_001283
AP1S1
adaptor-related protein complex 1, sigma 1 subunit
chr1_+_15736422 0.356 EFHD2
EF-hand domain family, member D2
chr6_+_42897236 0.355 CNPY3
canopy 3 homolog (zebrafish)
chr16_-_53737713 0.354 NM_001127897
NM_015272
RPGRIP1L

RPGRIP1-like

chr1_+_74663895 0.354 NM_001112808
NM_001199327
NM_001199328
NM_001199329
NM_003838
FPGT-TNNI3K

FPGT


FPGT-TNNI3K readthrough

fucose-1-phosphate guanylyltransferase


chr16_-_68482373 0.354 NM_018667
SMPD3
sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)
chr11_-_5959848 0.351 TRIM5
tripartite motif containing 5
chr4_-_186733372 0.344 NM_003603
NM_001145670
SORBS2

sorbin and SH3 domain containing 2

chr14_+_100259445 0.340 NM_001008707
NM_004434
EML1

echinoderm microtubule associated protein like 1

chr12_+_56511969 0.338 NM_032786
ZC3H10
zinc finger CCCH-type containing 10
chr3_+_113666544 0.334 NM_173570
ZDHHC23
zinc finger, DHHC-type containing 23
chr1_+_179051233 0.332 TOR3A
torsin family 3, member A
chr3_-_130745583 0.329 NM_014065
ASTE1
asteroid homolog 1 (Drosophila)
chr9_-_35828728 0.327 NM_001012446
C9orf128
chromosome 9 open reading frame 128
chr5_-_138739755 0.324 NM_194296
SPATA24
spermatogenesis associated 24
chr8_+_13424351 0.321 NM_001007090
C8orf48
chromosome 8 open reading frame 48
chr6_+_42896859 0.320 NM_006586
CNPY3
canopy 3 homolog (zebrafish)
chr20_+_10015696 0.319 NM_022096
NM_198798
ANKRD5

ankyrin repeat domain 5

chr7_-_102920840 0.317 DPY19L2P2
dpy-19-like 2 pseudogene 2 (C. elegans)
chr2_+_27070962 0.309 NM_020134
NM_001253723
NM_001253724
DPYSL5


dihydropyrimidinase-like 5


chr17_+_5095364 0.307 LOC100130950
uncharacterized LOC100130950
chr1_+_15736387 0.307 NM_024329
EFHD2
EF-hand domain family, member D2
chr10_+_73156650 0.305 NM_001171930
NM_001171931
NM_001171932
NM_022124
NM_052836
CDH23




cadherin-related 23




chr22_-_31063786 0.303 NM_152511
DUSP18
dual specificity phosphatase 18
chr15_-_55700456 0.296 NM_004748
NM_001204450
NM_001204451
NM_020739
CCPG1



cell cycle progression 1



chr16_+_19078916 0.295 NM_016138
COQ7
coenzyme Q7 homolog, ubiquinone (yeast)
chr7_+_76751933 0.293 NM_020879
CCDC146
coiled-coil domain containing 146
chr1_-_114301753 0.292 NM_006608
PHTF1
putative homeodomain transcription factor 1
chr4_+_114214102 0.292 ANK2
ankyrin 2, neuronal
chr15_+_96873845 0.292 NM_021005
NR2F2
nuclear receptor subfamily 2, group F, member 2
chr15_-_50838901 0.292 NM_203494
USP50
ubiquitin specific peptidase 50
chr16_-_19729417 0.289 NM_001012991
C16orf88
chromosome 16 open reading frame 88
chr16_-_30773303 0.289 NM_001014979
NM_001195620
C16orf93

chromosome 16 open reading frame 93

chr6_+_42897184 0.287 CNPY3
canopy 3 homolog (zebrafish)
chr1_+_67218148 0.286 TCTEX1D1
Tctex1 domain containing 1
chr11_+_111944967 0.284 NM_001082969
NM_001082970
NM_018195
C11orf57


chromosome 11 open reading frame 57


chr1_-_32687945 0.283 TMEM234
transmembrane protein 234
chrX_-_55187561 0.272 NM_001166702
NM_001166699
NM_001166700
NM_001166701
NM_001166704
NM_138362
FAM104B





family with sequence similarity 104, member B





chr9_-_140009167 0.270 DPP7
dipeptidyl-peptidase 7
chr2_+_48667907 0.270 NM_001135629
NM_001193475
NM_152994
PPP1R21


protein phosphatase 1, regulatory subunit 21


chr2_+_55746716 0.270 NM_080667
CCDC104
coiled-coil domain containing 104
chr12_-_54653369 0.268 NM_001127321
CBX5
chromobox homolog 5
chr6_-_39693110 0.268 NM_145027
KIF6
kinesin family member 6
chr11_+_63706433 0.267 NM_024771
NAA40
N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)
chr12_-_63328857 0.264 PPM1H
protein phosphatase, Mg2+/Mn2+ dependent, 1H
chr21_+_40817793 0.264 NM_001001713
SH3BGR
SH3 domain binding glutamic acid-rich protein
chr16_+_19079220 0.263 NM_001190983
COQ7
coenzyme Q7 homolog, ubiquinone (yeast)
chr2_-_130902568 0.263 NM_207310
CCDC74B
coiled-coil domain containing 74B
chr11_-_115375065 0.262 NM_001098517
NM_014333
CADM1

cell adhesion molecule 1

chr1_-_114302093 0.259 PHTF1
putative homeodomain transcription factor 1
chr14_-_102829050 0.259 NM_001177611
NM_001177612
NM_032630
CINP


cyclin-dependent kinase 2 interacting protein


chr2_-_178483677 0.258 NM_152275
TTC30A
tetratricopeptide repeat domain 30A
chr3_-_59035737 0.258 C3orf67
chromosome 3 open reading frame 67
chr3_-_113775363 0.257 NM_020817
KIAA1407
KIAA1407
chr1_-_173638970 0.257 NM_198493
ANKRD45
ankyrin repeat domain 45
chr17_-_5404304 0.256 NM_001162371
LOC728392
uncharacterized LOC728392
chr17_-_41277304 0.255 BRCA1
breast cancer 1, early onset
chr2_-_237994415 0.254 LOC401037
uncharacterized LOC401037
chr1_+_179051218 0.254 TOR3A
torsin family 3, member A
chr1_-_32687830 0.254 NM_019118
TMEM234
transmembrane protein 234
chr17_-_19619878 0.251 NM_001099646
NM_152908
SLC47A2

solute carrier family 47, member 2

chr17_-_41322211 0.248 BRCA1
breast cancer 1, early onset
chr6_+_116937641 0.246 NM_001010892
NM_001161664
RSPH4A

radial spoke head 4 homolog A (Chlamydomonas)

chr17_-_41277409 0.243 NM_007297
NM_007299
NM_007294
NM_007300
BRCA1



breast cancer 1, early onset



chr9_+_127615695 0.241 NM_001045476
WDR38
WD repeat domain 38
chr22_+_31892512 0.238 SFI1
Sfi1 homolog, spindle assembly associated (yeast)
chr16_-_67427335 0.236 NM_015964
NM_016140
TPPP3

tubulin polymerization-promoting protein family member 3

chr5_-_7851255 0.235 NM_001089584
C5orf49
chromosome 5 open reading frame 49
chr19_+_10527448 0.235 NM_001243121
PDE4A
phosphodiesterase 4A, cAMP-specific
chr4_+_113970784 0.234 NM_001148
NM_020977
ANK2

ankyrin 2, neuronal

chr2_+_239229140 0.234 NM_001139490
NM_015650
TRAF3IP1

TNF receptor-associated factor 3 interacting protein 1

chr7_+_102389325 0.233 NM_001145268
NM_001145269
FAM185A

family with sequence similarity 185, member A

chr10_-_17243617 0.233 TRDMT1
tRNA aspartic acid methyltransferase 1
chr1_-_155178968 0.233 THBS3
thrombospondin 3
chr15_-_43785368 0.227 TP53BP1
tumor protein p53 binding protein 1
chr12_-_63328663 0.227 NM_020700
PPM1H
protein phosphatase, Mg2+/Mn2+ dependent, 1H
chr1_-_48937791 0.226 NM_019073
SPATA6
spermatogenesis associated 6
chr6_-_32119717 0.226 NM_030651
PRRT1
proline-rich transmembrane protein 1
chr16_-_72206023 0.225 NM_031293
PMFBP1
polyamine modulated factor 1 binding protein 1
chr16_-_47494981 0.225 NM_030790
ITFG1
integrin alpha FG-GAP repeat containing 1
chr16_+_19078958 0.224 COQ7
coenzyme Q7 homolog, ubiquinone (yeast)
chr6_+_170615838 0.224 NM_032448
FAM120B
family with sequence similarity 120B
chr17_+_78010430 0.223 NM_001243342
NM_017950
CCDC40

coiled-coil domain containing 40

chr6_+_44195008 0.221 SLC29A1
solute carrier family 29 (nucleoside transporters), member 1
chr2_+_239229213 0.221 TRAF3IP1
TNF receptor-associated factor 3 interacting protein 1
chr20_-_3762060 0.221 NM_015417
SPEF1
sperm flagellar 1
chr10_-_129691202 0.220 NM_152311
CLRN3
clarin 3
chr16_+_8814567 0.220 NM_001127448
ABAT
4-aminobutyrate aminotransferase
chr10_+_134145597 0.219 NM_001143758
NM_001143759
NM_030626
LRRC27


leucine rich repeat containing 27


chr3_-_72897576 0.219 NM_018130
SHQ1
SHQ1 homolog (S. cerevisiae)
chr16_-_47494753 0.218 ITFG1
integrin alpha FG-GAP repeat containing 1
chr8_+_42010463 0.217 NM_001134296
NM_006803
AP3M2

adaptor-related protein complex 3, mu 2 subunit

chr8_-_125486808 0.216


chr7_-_156433115 0.215 C7orf13
chromosome 7 open reading frame 13
chr1_-_201123592 0.214 NM_016456
TMEM9
transmembrane protein 9
chr11_+_82904751 0.214 ANKRD42
ankyrin repeat domain 42
chr6_-_121655606 0.212 NM_152730
C6orf170
chromosome 6 open reading frame 170
chr22_+_31892372 0.211 SFI1
Sfi1 homolog, spindle assembly associated (yeast)
chr15_-_43785266 0.210 NM_001141979
NM_001141980
TP53BP1

tumor protein p53 binding protein 1

chr8_+_38243958 0.210 NM_001199659
NM_144652
LETM2

leucine zipper-EF-hand containing transmembrane protein 2

chr2_-_110962577 0.208 NM_000272
NM_001128178
NM_001128179
NM_207181
NPHP1



nephronophthisis 1 (juvenile)



chr16_-_47495095 0.208 ITFG1
integrin alpha FG-GAP repeat containing 1
chr16_-_69760354 0.204 NQO1
NAD(P)H dehydrogenase, quinone 1
chr16_-_69760367 0.204 NQO1
NAD(P)H dehydrogenase, quinone 1
chr16_+_72698996 0.203


chr19_-_1490340 0.202 PCSK4
proprotein convertase subtilisin/kexin type 4
chr6_+_111303240 0.201 NM_032194
RPF2
ribosome production factor 2 homolog (S. cerevisiae)
chr11_-_8680382 0.200 NM_014818
TRIM66
tripartite motif containing 66
chr11_-_66360485 0.199 NM_018219
CCDC87
coiled-coil domain containing 87
chr20_-_271303 0.197 NM_080571
NM_153269
C20orf96

chromosome 20 open reading frame 96

chr2_+_239229037 0.196 TRAF3IP1
TNF receptor-associated factor 3 interacting protein 1
chr22_-_39052306 0.196 LOC646851
putative uncharacterized protein LOC388900
chr6_-_32119667 0.195 PRRT1
proline-rich transmembrane protein 1
chr14_-_74485813 0.195 NM_001249
ENTPD5
ectonucleoside triphosphate diphosphohydrolase 5
chr10_-_75118502 0.192 NM_145170
TTC18
tetratricopeptide repeat domain 18
chr1_-_201123560 0.192 TMEM9
transmembrane protein 9
chr3_-_149688886 0.191 PFN2
profilin 2
chr1_+_84630374 0.191 PRKACB
protein kinase, cAMP-dependent, catalytic, beta
chr15_-_43802666 0.190 NM_005657
TP53BP1
tumor protein p53 binding protein 1
chr1_-_39338976 0.190 NM_012333
MYCBP
c-myc binding protein
chr12_-_54653317 0.188 NM_001127322
CBX5
chromobox homolog 5
chr14_-_60337350 0.188 NM_021136
RTN1
reticulon 1
chr4_-_170924911 0.186 NM_001009554
MFAP3L
microfibrillar-associated protein 3-like
chr16_-_20702577 0.186 NM_052956
ACSM1
acyl-CoA synthetase medium-chain family member 1
chr3_-_72897524 0.186 SHQ1
SHQ1 homolog (S. cerevisiae)
chr22_-_43485333 0.186 NM_012263
TTLL1
tubulin tyrosine ligase-like family, member 1
chr14_-_48144156 0.186 NM_001113498
MDGA2
MAM domain containing glycosylphosphatidylinositol anchor 2
chr1_-_220101781 0.185


chr2_-_38978397 0.185 NM_001031684
NM_001195446
SRSF7

serine/arginine-rich splicing factor 7

chr16_+_2076806 0.184 NM_001130012
NM_004785
SLC9A3R2

solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2

chr15_+_90728118 0.183 NM_020210
SEMA4B
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B
chr1_+_179051111 0.183 NM_022371
TOR3A
torsin family 3, member A
chr10_-_99393175 0.183 NM_178832
MORN4
MORN repeat containing 4
chr9_+_131085052 0.181 COQ4
coenzyme Q4 homolog (S. cerevisiae)
chr16_-_71264557 0.181 NM_032821
NM_017558
HYDIN

hydrocephalus inducing homolog (mouse)

chr5_-_14011846 0.180 DNAH5
dynein, axonemal, heavy chain 5
chr3_+_48507209 0.179 NM_016381
NM_033629
TREX1

three prime repair exonuclease 1

chr7_-_35077652 0.178 NM_015283
DPY19L1
dpy-19-like 1 (C. elegans)
chr1_-_48937676 0.178 SPATA6
spermatogenesis associated 6
chr15_-_90233853 0.176 NM_003847
PEX11A
peroxisomal biogenesis factor 11 alpha
chr1_+_10093149 0.176 UBE4B
ubiquitination factor E4B
chr9_+_100069909 0.174 NM_020893
C9orf174
chromosome 9 open reading frame 174
chr1_+_161129288 0.172 USP21
ubiquitin specific peptidase 21
chr17_+_66508098 0.171 NM_212471
PRKAR1A
protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)
chr3_-_123339423 0.171 NM_053031
NM_053032
MYLK

myosin light chain kinase

chr12_-_6716475 0.169 CHD4
chromodomain helicase DNA binding protein 4
chr14_-_59932051 0.169 NM_022571
GPR135
G protein-coupled receptor 135
chr6_+_170615780 0.169 FAM120B
family with sequence similarity 120B
chr6_+_111580568 0.168 KIAA1919
KIAA1919
chr1_+_63989012 0.168 NM_032437
EFCAB7
EF-hand calcium binding domain 7
chr3_-_113160318 0.164 NM_001164496
NM_018338
WDR52

WD repeat domain 52

chr16_+_19179534 0.164 NM_016524
SYT17
synaptotagmin XVII
chr6_+_109169587 0.164 NM_032131
ARMC2
armadillo repeat containing 2
chr3_+_51705221 0.163 NM_001129884
NM_001243727
NM_015926
NM_001243725
NM_001243726
TEX264




testis expressed 264




chr12_-_123921219 0.162 NM_145058
RILPL2
Rab interacting lysosomal protein-like 2
chr2_+_232063340 0.161 NM_025139
ARMC9
armadillo repeat containing 9
chr8_-_125486752 0.160


chr22_+_37447615 0.160 NM_024681
KCTD17
potassium channel tetramerisation domain containing 17
chr18_+_44526786 0.159 NM_031303
KATNAL2
katanin p60 subunit A-like 2
chr1_-_220101925 0.159 NM_018713
SLC30A10
solute carrier family 30, member 10
chr8_-_30515665 0.159 NM_002095
GTF2E2
general transcription factor IIE, polypeptide 2, beta 34kDa
chr3_-_72897575 0.159 SHQ1
SHQ1 homolog (S. cerevisiae)

Gene Ontology Analysis

Nothing significant found in process category.

Nothing significant found in compartment category.

Nothing significant found in function category.