hg19_v1_chr14_-_65409445_65409586	2.45769	SOX2.p2	BC022820|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	AK225871|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	BC005277|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	BC067221|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	BC016756|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	X68314|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	X53463|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	BC039850|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	BC046164|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	NM_002083|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)
hg19_v1_chr5_+_140474198_140474414	2.07661	SOX2.p2	AK027526|PCDHB2|56133|protocadherin beta 2	BC098575|PCDHB2|56133|protocadherin beta 2	NM_018936|PCDHB2|56133|protocadherin beta 2	AK314642|PCDHB2|56133|protocadherin beta 2	BC098347|PCDHB2|56133|protocadherin beta 2	AF152495|PCDHB2|56133|protocadherin beta 2	AF217756|PCDHB2|56133|protocadherin beta 2	AB209745|PCDHB2|56133|protocadherin beta 2
hg19_v1_chr7_-_96633608_96633614	2.07051	SOX2.p2	AK091367|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)	BC101445|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)	BC101446|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)	BC101447|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)	BC101985|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)	BC113049|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)
hg19_v1_chrX_-_105282714_105282745	1.81986	SOX2.p2	AK310778|SERPINA7|6906|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7	NM_000354|SERPINA7|6906|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7
hg19_v1_chr5_-_36301999_36302010	1.72175	SOX2.p2	BC017951|RANBP3L|202151|RAN binding protein 3-like	AK058151|RANBP3L|202151|RAN binding protein 3-like	AK302947|RANBP3L|202151|RAN binding protein 3-like	BC047660|RANBP3L|202151|RAN binding protein 3-like	NM_001161429|RANBP3L|202151|RAN binding protein 3-like	NM_145000|RANBP3L|202151|RAN binding protein 3-like
hg19_v1_chr15_+_66994669_66994680	1.4542	SOX2.p2	AF035528|SMAD6|4091|SMAD family member 6	NM_005585|SMAD6|4091|SMAD family member 6
hg19_v1_chrX_-_24690740_24690978	1.44916	SOX2.p2	BC045634|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AK296333|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AK226121|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_001163264|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg19_v1_chr10_+_54074037_54074194	1.40366	SOX2.p2	NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)
hg19_v1_chr5_+_140480056_140480233	1.40244	SOX2.p2	AK313451|PCDHB3|56132|protocadherin beta 3	BC104817|PCDHB3|56132|protocadherin beta 3	AF152496|PCDHB3|56132|protocadherin beta 3	AF217755|PCDHB3|56132|protocadherin beta 3	NM_018937|PCDHB3|56132|protocadherin beta 3
hg19_v1_chr1_+_39875175_39875175	1.37141	SOX2.p2	NM_015038|KIAA0754|643314|KIAA0754
hg19_v1_chr11_+_76092336_76092511	1.36721	SOX2.p2	AK125821|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like	BC040665|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like	AK095089|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like
hg19_v1_chr1_-_32801606_32801856	1.30782	SOX2.p2	AM393505|MARCKSL1|65108|MARCKS-like 1	DQ893237|MARCKSL1|65108|MARCKS-like 1	DQ896567|MARCKSL1|65108|MARCKS-like 1	X70326|MARCKSL1|65108|MARCKS-like 1	AL713653|MARCKSL1|65108|MARCKS-like 1	AY007131|MARCKSL1|65108|MARCKS-like 1	BC007904|MARCKSL1|65108|MARCKS-like 1	BC066915|MARCKSL1|65108|MARCKS-like 1	NM_023009|MARCKSL1|65108|MARCKS-like 1
hg19_v1_chr9_-_95298251_95298373	1.28707	SOX2.p2	AB011792|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	AK303922|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	AK312820|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	AK296458|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	BX537976|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	NM_001197295|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	NM_001197296|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	NM_001393|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific
hg19_v1_chr6_+_114178516_114178953	1.27816	SOX2.p2	AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate
hg19_v1_chr2_+_102508333_102508351	1.26719	SOX2.p2	BC045694|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4
hg19_v1_chr7_+_26400503_26400554	1.21736	SOX2.p2	NM_001199837|SNX10|29887|sorting nexin 10	AK307905|SNX10|29887|sorting nexin 10
hg19_v1_chr12_-_24103953_24103970	1.21574	SOX2.p2	BC014929|SOX5|6660|SRY (sex determining region Y)-box 5	AK303970|SOX5|6660|SRY (sex determining region Y)-box 5
hg19_v1_chr7_-_84751246_84751246	1.20808	SOX2.p2	NM_152754|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
hg19_v1_chr3_+_186648515_186648640	1.19074	SOX2.p2	X17247|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
hg19_v1_chr5_-_111091947_111091947	1.18136	SOX2.p2	NM_001142483|C5orf13|9315|chromosome 5 open reading frame 13
hg19_v1_chr4_-_186877413_186877531	1.16546	SOX2.p2	AK295742|SORBS2|8470|sorbin and SH3 domain containing 2	AK056628|SORBS2|8470|sorbin and SH3 domain containing 2	BC035329|SORBS2|8470|sorbin and SH3 domain containing 2	AB018320|SORBS2|8470|sorbin and SH3 domain containing 2
hg19_v1_chr12_+_70759974_70760559	1.15577	SOX2.p2	NM_014505|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF160967|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	BC042446|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	BC050621|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF215891|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF207992|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4
hg19_v1_chr17_+_67498391_67498569	1.1373	SOX2.p2	U39064|MAP2K6|5608|mitogen-activated protein kinase kinase 6
hg19_v1_chr4_+_110749149_110749158	1.1176	SOX2.p2	NM_006583|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128120|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128121|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128401|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog
hg19_v1_chr8_-_102803196_102803204	1.09612	SOX2.p2	AK055073|NCALD|83988|neurocalcin delta	AK314523|NCALD|83988|neurocalcin delta
hg19_v1_chr7_+_73245192_73245350	1.09588	SOX2.p2	NM_001305|CLDN4|1364|claudin 4	AK026651|CLDN4|1364|claudin 4	AK124076|CLDN4|1364|claudin 4	BC000671|CLDN4|1364|claudin 4	AB000712|CLDN4|1364|claudin 4
hg19_v1_chr12_-_24103842_24103866	1.06621	SOX2.p2	AK299607|SOX5|6660|SRY (sex determining region Y)-box 5	AK096569|SOX5|6660|SRY (sex determining region Y)-box 5
hg19_v1_chr12_-_24715349_24715382	1.05491	SOX2.p2	AB081588|SOX5|6660|SRY (sex determining region Y)-box 5	NM_152989|SOX5|6660|SRY (sex determining region Y)-box 5	BC060773|SOX5|6660|SRY (sex determining region Y)-box 5
hg19_v1_chr7_-_92855780_92855786	1.02958	SOX2.p2	AK096002|HEPACAM2|253012|HEPACAM family member 2	AK298361|HEPACAM2|253012|HEPACAM family member 2	NM_001039372|HEPACAM2|253012|HEPACAM family member 2
hg19_v1_chr3_-_71353910_71353910	1.00505	SOX2.p2	AK092383|FOXP1|27086|forkhead box P1	NM_001244812|FOXP1|27086|forkhead box P1
hg19_v1_chr2_+_16080639_16080737	0.969597	SOX2.p2	AK298225|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	NM_005378|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	AF320053|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	AK299495|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
hg19_v1_chr10_+_102732285_102732285	0.96451	SOX2.p2	NM_001203244|SEMA4G|57715|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G	NM_017893|SEMA4G|57715|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
hg19_v1_chr6_-_130031278_130031375	0.963587	SOX2.p2	BC062417|ARHGAP18|93663|Rho GTPase activating protein 18	BC017223|ARHGAP18|93663|Rho GTPase activating protein 18	BC039611|ARHGAP18|93663|Rho GTPase activating protein 18	AL834511|ARHGAP18|93663|Rho GTPase activating protein 18	BC073143|ARHGAP18|93663|Rho GTPase activating protein 18	BC107416|ARHGAP18|93663|Rho GTPase activating protein 18	BC101708|ARHGAP18|93663|Rho GTPase activating protein 18	BC111940|ARHGAP18|93663|Rho GTPase activating protein 18	BC143531|ARHGAP18|93663|Rho GTPase activating protein 18	AK098594|ARHGAP18|93663|Rho GTPase activating protein 18	AY643712|ARHGAP18|93663|Rho GTPase activating protein 18	NM_033515|ARHGAP18|93663|Rho GTPase activating protein 18
hg19_v1_chr4_-_186732047_186732047	0.940918	SOX2.p2	AK293400|SORBS2|8470|sorbin and SH3 domain containing 2	NM_001145672|SORBS2|8470|sorbin and SH3 domain containing 2
hg19_v1_chr17_+_67410825_67410927	0.918501	SOX2.p2	AK290747|MAP2K6|5608|mitogen-activated protein kinase kinase 6	NM_002758|MAP2K6|5608|mitogen-activated protein kinase kinase 6	U39065|MAP2K6|5608|mitogen-activated protein kinase kinase 6	AK225719|MAP2K6|5608|mitogen-activated protein kinase kinase 6	X96757|MAP2K6|5608|mitogen-activated protein kinase kinase 6	BC012009|MAP2K6|5608|mitogen-activated protein kinase kinase 6
hg19_v1_chr2_+_102508377_102508687	0.910304	SOX2.p2	BC054038|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	BC010909|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	BC040077|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	BC065036|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	BC051791|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4
hg19_v1_chr8_-_30002199_30002201	0.90315	SOX2.p2	NM_001100916|MBOAT4|619373|membrane bound O-acyltransferase domain containing 4	EU518495|MBOAT4|619373|membrane bound O-acyltransferase domain containing 4
hg19_v1_chr7_+_94297448_94297456	0.896925	SOX2.p2	AF038197|PEG10|23089|paternally expressed 10
hg19_v1_chr5_+_140739589_140739702	0.883532	SOX2.p2	BC101805|PCDHGB2|56103|protocadherin gamma subfamily B, 2	AF152331|PCDHGB2|56103|protocadherin gamma subfamily B, 2	AF152518|PCDHGB2|56103|protocadherin gamma subfamily B, 2	NM_018923|PCDHGB2|56103|protocadherin gamma subfamily B, 2	NM_032096|PCDHGB2|56103|protocadherin gamma subfamily B, 2
hg19_v1_chr2_+_16080559_16080569	0.883254	SOX2.p2	M55330|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
hg19_v1_chr1_+_213123853_213123982	0.881287	SOX2.p2	AK290973|VASH2|79805|vasohibin 2	NM_001136474|VASH2|79805|vasohibin 2	NM_001136475|VASH2|79805|vasohibin 2	NM_024749|VASH2|79805|vasohibin 2	AK022567|VASH2|79805|vasohibin 2	AK096605|VASH2|79805|vasohibin 2	BC053836|VASH2|79805|vasohibin 2	BC051856|VASH2|79805|vasohibin 2	BC028194|VASH2|79805|vasohibin 2
hg19_v1_chr4_-_109089444_109090154	0.878225	SOX2.p2	AF288571|LEF1|51176|lymphoid enhancer-binding factor 1	AK225772|LEF1|51176|lymphoid enhancer-binding factor 1	NM_001130713|LEF1|51176|lymphoid enhancer-binding factor 1	NM_001130714|LEF1|51176|lymphoid enhancer-binding factor 1	NM_016269|LEF1|51176|lymphoid enhancer-binding factor 1
hg19_v1_chr2_+_27070962_27071291	0.866127	SOX2.p2	AF264015|DPYSL5|56896|dihydropyrimidinase-like 5	NM_020134|DPYSL5|56896|dihydropyrimidinase-like 5	BC002874|DPYSL5|56896|dihydropyrimidinase-like 5	NM_001253723|DPYSL5|56896|dihydropyrimidinase-like 5	NM_001253724|DPYSL5|56896|dihydropyrimidinase-like 5
hg19_v1_chr3_-_123339178_123339390	0.85217	SOX2.p2	BC113458|MYLK|4638|myosin light chain kinase	BC113456|MYLK|4638|myosin light chain kinase	BC100761|MYLK|4638|myosin light chain kinase	BC100762|MYLK|4638|myosin light chain kinase	BC100763|MYLK|4638|myosin light chain kinase	AF096773|MYLK|4638|myosin light chain kinase	AF096774|MYLK|4638|myosin light chain kinase	AF096775|MYLK|4638|myosin light chain kinase	AK314412|MYLK|4638|myosin light chain kinase	BC017811|MYLK|4638|myosin light chain kinase	BC107783|MYLK|4638|myosin light chain kinase	Y09530|MYLK|4638|myosin light chain kinase	BC064420|MYLK|4638|myosin light chain kinase	AK314443|MYLK|4638|myosin light chain kinase
hg19_v1_chr14_+_105941061_105941199	0.85146	SOX2.p2	BC034151|CRIP2|1397|cysteine-rich protein 2	NM_001312|CRIP2|1397|cysteine-rich protein 2	AK315757|CRIP2|1397|cysteine-rich protein 2	U36190|CRIP2|1397|cysteine-rich protein 2	BC034386|CRIP2|1397|cysteine-rich protein 2	BC128101|CRIP2|1397|cysteine-rich protein 2	D42123|CRIP2|1397|cysteine-rich protein 2	BC000434|CRIP2|1397|cysteine-rich protein 2	BC001931|CRIP2|1397|cysteine-rich protein 2	DQ891382|CRIP2|1397|cysteine-rich protein 2	DQ894559|CRIP2|1397|cysteine-rich protein 2	AK223251|CRIP2|1397|cysteine-rich protein 2	BT019911|CRIP2|1397|cysteine-rich protein 2
hg19_v1_chr14_-_92413738_92413810	0.847337	SOX2.p2	AF112152|FBLN5|10516|fibulin 5	AF093118|FBLN5|10516|fibulin 5	BX248290|FBLN5|10516|fibulin 5	BC022280|FBLN5|10516|fibulin 5	AK075147|FBLN5|10516|fibulin 5
hg19_v1_chr6_-_64029847_64029881	0.84575	SOX2.p2	DQ682605|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	DQ682606|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	BC130366|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	BC130368|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	AF242388|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	NM_001143940|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	NM_016571|LGSN|51557|lengsin, lens protein with glutamine synthetase domain
hg19_v1_chr8_+_24151579_24151636	0.837471	SOX2.p2	NM_014265|ADAM28|10863|ADAM metallopeptidase domain 28	NM_021777|ADAM28|10863|ADAM metallopeptidase domain 28	AK225921|ADAM28|10863|ADAM metallopeptidase domain 28	AK293382|ADAM28|10863|ADAM metallopeptidase domain 28	AK303437|ADAM28|10863|ADAM metallopeptidase domain 28	AJ242015|ADAM28|10863|ADAM metallopeptidase domain 28	AF137334|ADAM28|10863|ADAM metallopeptidase domain 28	AF137335|ADAM28|10863|ADAM metallopeptidase domain 28	BC136478|ADAM28|10863|ADAM metallopeptidase domain 28	BC144140|ADAM28|10863|ADAM metallopeptidase domain 28
hg19_v1_chr4_+_154178525_154178554	0.836229	SOX2.p2	BC025417|TRIM2|23321|tripartite motif containing 2
hg19_v1_chr3_+_186648273_186648346	0.83497	SOX2.p2	NM_173216|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1	NM_173217|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
hg19_v1_chr2_+_177016112_177016314	0.834309	SOX2.p2	NM_014621|HOXD4|3233|homeobox D4	X04706|HOXD4|3233|homeobox D4	AK313885|HOXD4|3233|homeobox D4	BC016763|HOXD4|3233|homeobox D4	BC074797|HOXD4|3233|homeobox D4
hg19_v1_chr1_+_200993041_200993134	0.833746	SOX2.p2	
hg19_v1_chrX_+_106171328_106171458	0.829668	SOX2.p2	AY358474|CLDN2|9075|claudin 2	BC014424|CLDN2|9075|claudin 2	DQ892216|CLDN2|9075|claudin 2	DQ895412|CLDN2|9075|claudin 2	AF250558|CLDN2|9075|claudin 2
hg19_v1_chr5_-_83680191_83680301	0.828875	SOX2.p2	U70313|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	EU831927|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	EU831963|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	EU832022|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	EU832056|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	AK312858|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	BX648583|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	BC053656|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	U70312|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3
hg19_v1_chr3_-_123339423_123339529	0.81183	SOX2.p2	NM_053031|MYLK|4638|myosin light chain kinase	NM_053032|MYLK|4638|myosin light chain kinase
hg19_v1_chr7_-_107443631_107443677	0.809849	SOX2.p2	L02785|SLC26A3|1811|solute carrier family 26, member 3	BC025671|SLC26A3|1811|solute carrier family 26, member 3	BX640837|SLC26A3|1811|solute carrier family 26, member 3	NM_000111|SLC26A3|1811|solute carrier family 26, member 3
hg19_v1_chr19_-_15590203_15590316	0.805495	SOX2.p2	BC136551|PGLYRP2|114770|peptidoglycan recognition protein 2	BC136552|PGLYRP2|114770|peptidoglycan recognition protein 2	BC144238|PGLYRP2|114770|peptidoglycan recognition protein 2	AF384856|PGLYRP2|114770|peptidoglycan recognition protein 2	AY358156|PGLYRP2|114770|peptidoglycan recognition protein 2	AK289415|PGLYRP2|114770|peptidoglycan recognition protein 2	AB073610|PGLYRP2|114770|peptidoglycan recognition protein 2	AK055882|PGLYRP2|114770|peptidoglycan recognition protein 2	NM_052890|PGLYRP2|114770|peptidoglycan recognition protein 2
hg19_v1_chr3_+_3841079_3841120	0.802158	SOX2.p2	NM_020873|LRRN1|57633|leucine rich repeat neuronal 1
hg19_v1_chr5_+_140729723_140729827	0.802093	SOX2.p2	AF152330|PCDHGB1|56104|protocadherin gamma subfamily B, 1	AF152517|PCDHGB1|56104|protocadherin gamma subfamily B, 1	BC103926|PCDHGB1|56104|protocadherin gamma subfamily B, 1	BC103927|PCDHGB1|56104|protocadherin gamma subfamily B, 1	BC103928|PCDHGB1|56104|protocadherin gamma subfamily B, 1	NM_018922|PCDHGB1|56104|protocadherin gamma subfamily B, 1	NM_032095|PCDHGB1|56104|protocadherin gamma subfamily B, 1
hg19_v1_chr11_+_89392464_89392464	0.78676	SOX2.p2	AF261715|FOLH1B|219595|folate hydrolase 1B	NM_153696|FOLH1B|219595|folate hydrolase 1B
hg19_v1_chr3_-_168864325_168864399	0.767746	SOX2.p2	AK292865|MECOM|2122|MDS1 and EVI1 complex locus	AF487422|MECOM|2122|MDS1 and EVI1 complex locus	NM_001105078|MECOM|2122|MDS1 and EVI1 complex locus
hg19_v1_chr2_+_232573226_232573243	0.762408	SOX2.p2	NM_001099285|PTMA|5757|prothymosin, alpha	NM_002823|PTMA|5757|prothymosin, alpha	BC022433|PTMA|5757|prothymosin, alpha	AK223605|PTMA|5757|prothymosin, alpha	AK314106|PTMA|5757|prothymosin, alpha	M14630|PTMA|5757|prothymosin, alpha	BC034921|PTMA|5757|prothymosin, alpha
hg19_v1_chr1_-_16539103_16539165	0.762377	SOX2.p2	BC040640|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19	NM_153213|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19	AK091281|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19	AK297707|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19
hg19_v1_chr7_+_87563432_87563734	0.762278	SOX2.p2	BC036029|ADAM22|53616|ADAM metallopeptidase domain 22	BC092465|ADAM22|53616|ADAM metallopeptidase domain 22	NM_004194|ADAM22|53616|ADAM metallopeptidase domain 22	NM_016351|ADAM22|53616|ADAM metallopeptidase domain 22	NM_021721|ADAM22|53616|ADAM metallopeptidase domain 22	NM_021722|ADAM22|53616|ADAM metallopeptidase domain 22	NM_021723|ADAM22|53616|ADAM metallopeptidase domain 22	AK291010|ADAM22|53616|ADAM metallopeptidase domain 22	BC062433|ADAM22|53616|ADAM metallopeptidase domain 22	BC125118|ADAM22|53616|ADAM metallopeptidase domain 22	BC125117|ADAM22|53616|ADAM metallopeptidase domain 22	AF073291|ADAM22|53616|ADAM metallopeptidase domain 22	AF155381|ADAM22|53616|ADAM metallopeptidase domain 22	AF155382|ADAM22|53616|ADAM metallopeptidase domain 22
hg19_v1_chr5_+_140593508_140593537	0.759119	SOX2.p2	AK021915|PCDHB13|56123|protocadherin beta 13	NM_018933|PCDHB13|56123|protocadherin beta 13	AY358427|PCDHB13|56123|protocadherin beta 13	AK296151|PCDHB13|56123|protocadherin beta 13	AK292821|PCDHB13|56123|protocadherin beta 13	BC033068|PCDHB13|56123|protocadherin beta 13	BC051348|PCDHB13|56123|protocadherin beta 13	BC071934|PCDHB13|56123|protocadherin beta 13
hg19_v1_chr6_-_134639195_134639195	0.758284	SOX2.p2	AK055077|SGK1|6446|serum/glucocorticoid regulated kinase 1	NM_001143676|SGK1|6446|serum/glucocorticoid regulated kinase 1
hg19_v1_chr11_-_114271052_114271297	0.757519	SOX2.p2	CR457222|C11orf71|54494|chromosome 11 open reading frame 71	BC071695|C11orf71|54494|chromosome 11 open reading frame 71	NM_019021|C11orf71|54494|chromosome 11 open reading frame 71	BC009041|C11orf71|54494|chromosome 11 open reading frame 71	AK000017|C11orf71|54494|chromosome 11 open reading frame 71
hg19_v1_chr1_-_198906536_198906559	0.756033	SOX2.p2	EF413001|LOC100131234|100131234|familial acute myelogenous leukemia related factor
hg19_v1_chr9_+_116638544_116638655	0.751443	SOX2.p2	BC036039|ZNF618|114991|zinc finger protein 618	NM_133374|ZNF618|114991|zinc finger protein 618	BC136287|ZNF618|114991|zinc finger protein 618	BC143826|ZNF618|114991|zinc finger protein 618	AK126896|ZNF618|114991|zinc finger protein 618	BC053892|ZNF618|114991|zinc finger protein 618
hg19_v1_chr18_+_72922725_72922765	0.750211	SOX2.p2	NM_005786|TSHZ1|10194|teashirt zinc finger homeobox 1
hg19_v1_chr1_-_16161279_16161390	0.745894	SOX2.p2	
hg19_v1_chr7_+_105603656_105603741	0.743406	SOX2.p2	NM_152750|CDHR3|222256|cadherin-related family member 3	AK126338|CDHR3|222256|cadherin-related family member 3	AK131293|CDHR3|222256|cadherin-related family member 3	AK304118|CDHR3|222256|cadherin-related family member 3	BC111696|CDHR3|222256|cadherin-related family member 3	BC111738|CDHR3|222256|cadherin-related family member 3	AK304352|CDHR3|222256|cadherin-related family member 3
hg19_v1_chr2_+_232573249_232573416	0.743359	SOX2.p2	BC098420|PTMA|5757|prothymosin, alpha	BC070480|PTMA|5757|prothymosin, alpha	BC003510|PTMA|5757|prothymosin, alpha	BC051265|PTMA|5757|prothymosin, alpha	BC071879|PTMA|5757|prothymosin, alpha	BC071647|PTMA|5757|prothymosin, alpha	M26708|PTMA|5757|prothymosin, alpha	M14483|PTMA|5757|prothymosin, alpha	BC066905|PTMA|5757|prothymosin, alpha	M14794|PTMA|5757|prothymosin, alpha	DQ892963|PTMA|5757|prothymosin, alpha	DQ896210|PTMA|5757|prothymosin, alpha	AF348514|PTMA|5757|prothymosin, alpha	AY169282|PTMA|5757|prothymosin, alpha
hg19_v1_chr12_-_122240827_122240888	0.738834	SOX2.p2	
hg19_v1_chr2_+_70056920_70057023	0.729233	SOX2.p2	EU832645|GMCL1|64395|germ cell-less homolog 1 (Drosophila)	EU832722|GMCL1|64395|germ cell-less homolog 1 (Drosophila)
hg19_v1_chr1_+_215256559_215256661	0.726005	SOX2.p2	NM_001017425|KCNK2|3776|potassium channel, subfamily K, member 2	NM_014217|KCNK2|3776|potassium channel, subfamily K, member 2	AK294780|KCNK2|3776|potassium channel, subfamily K, member 2	AK291483|KCNK2|3776|potassium channel, subfamily K, member 2	BC143586|KCNK2|3776|potassium channel, subfamily K, member 2	BC101693|KCNK2|3776|potassium channel, subfamily K, member 2	BC101695|KCNK2|3776|potassium channel, subfamily K, member 2	AF004711|KCNK2|3776|potassium channel, subfamily K, member 2	EF165334|KCNK2|3776|potassium channel, subfamily K, member 2	AF171068|KCNK2|3776|potassium channel, subfamily K, member 2	BC069462|KCNK2|3776|potassium channel, subfamily K, member 2	EF165335|KCNK2|3776|potassium channel, subfamily K, member 2
hg19_v1_chr9_-_107690435_107690525	0.724952	SOX2.p2	AK024328|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1	AF258627|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1
hg19_v1_chr2_+_70056773_70056841	0.716402	SOX2.p2	AK024042|GMCL1|64395|germ cell-less homolog 1 (Drosophila)	BC007420|GMCL1|64395|germ cell-less homolog 1 (Drosophila)	NM_178439|GMCL1|64395|germ cell-less homolog 1 (Drosophila)	AK023119|GMCL1|64395|germ cell-less homolog 1 (Drosophila)
hg19_v1_chr2_-_21233930_21233982	0.714197	SOX2.p2	X03326|APOB|338|apolipoprotein B (including Ag(x) antigen)
hg19_v1_chr1_-_102462371_102462604	0.713087	SOX2.p2	EU176509|OLFM3|118427|olfactomedin 3	AF397394|OLFM3|118427|olfactomedin 3	AF397395|OLFM3|118427|olfactomedin 3	AF397396|OLFM3|118427|olfactomedin 3	AF397397|OLFM3|118427|olfactomedin 3	BC022531|OLFM3|118427|olfactomedin 3	AK095724|OLFM3|118427|olfactomedin 3
hg19_v1_chr6_+_130339715_130339735	0.711199	SOX2.p2	AK094137|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	NM_001007102|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	NM_032438|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	BC060845|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	AK290219|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)
hg19_v1_chrX_-_15683153_15683153	0.709872	SOX2.p2	BC014317|TMEM27|57393|transmembrane protein 27	NM_020665|TMEM27|57393|transmembrane protein 27
hg19_v1_chr1_+_183605207_183605477	0.709472	SOX2.p2	NM_015149|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AF186780|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	BX537416|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK316526|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK295179|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK295611|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	BC136591|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1
hg19_v1_chr1_+_84647342_84647342	0.707577	SOX2.p2	AK316115|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242862|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta
hg19_v1_chr1_-_204463512_204464019	0.706281	SOX2.p2	BC094741|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide
hg19_v1_chr10_+_105005643_105005704	0.700041	SOX2.p2	BC157875|LOC729020|729020|rcRPE	BC171885|LOC729020|729020|rcRPE	NM_001143909|LOC729020|729020|rcRPE	BC137242|LOC729020|729020|rcRPE	BC137243|LOC729020|729020|rcRPE	BC157829|LOC729020|729020|rcRPE	BC171806|LOC729020|729020|rcRPE
hg19_v1_chr8_-_119964059_119964382	0.692296	SOX2.p2	AB002146|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	DQ892264|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	DQ895466|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	AK223155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	AK308524|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	U94332|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	BC011023|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	BC030155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	NM_002546|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b
hg19_v1_chr5_+_140602914_140603078	0.690059	SOX2.p2	AK301346|PCDHB14|56122|protocadherin beta 14	AK298296|PCDHB14|56122|protocadherin beta 14	AK074555|PCDHB14|56122|protocadherin beta 14	AF152493|PCDHB14|56122|protocadherin beta 14	AF217744|PCDHB14|56122|protocadherin beta 14	BC099728|PCDHB14|56122|protocadherin beta 14	NM_018934|PCDHB14|56122|protocadherin beta 14	BC098144|PCDHB14|56122|protocadherin beta 14
hg19_v1_chr8_+_74207093_74207445	0.689779	SOX2.p2	AF456765|RDH10|157506|retinol dehydrogenase 10 (all-trans)	BC067131|RDH10|157506|retinol dehydrogenase 10 (all-trans)	AY358270|RDH10|157506|retinol dehydrogenase 10 (all-trans)
hg19_v1_chr6_+_105404922_105404922	0.688029	SOX2.p2	AK131411|LIN28B|389421|lin-28 homolog B (C. elegans)	DQ127228|LIN28B|389421|lin-28 homolog B (C. elegans)	NM_001004317|LIN28B|389421|lin-28 homolog B (C. elegans)
hg19_v1_chr5_+_170846659_170846666	0.686564	SOX2.p2	AY358811|FGF18|8817|fibroblast growth factor 18	AF075292|FGF18|8817|fibroblast growth factor 18	NM_003862|FGF18|8817|fibroblast growth factor 18
hg19_v1_chr1_+_164528914_164529059	0.6852	SOX2.p2	AK291415|PBX1|5087|pre-B-cell leukemia homeobox 1	M86546|PBX1|5087|pre-B-cell leukemia homeobox 1	AK299673|PBX1|5087|pre-B-cell leukemia homeobox 1	BC101578|PBX1|5087|pre-B-cell leukemia homeobox 1	BC143435|PBX1|5087|pre-B-cell leukemia homeobox 1	BC143451|PBX1|5087|pre-B-cell leukemia homeobox 1	BT006705|PBX1|5087|pre-B-cell leukemia homeobox 1
hg19_v1_chr1_+_81771844_81772011	0.682665	SOX2.p2	BC031321|LPHN2|23266|latrophilin 2	AK123422|LPHN2|23266|latrophilin 2
hg19_v1_chr1_-_53793743_53793820	0.680009	SOX2.p2	NM_001018054|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_004631|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_017522|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_033300|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
hg19_v1_chr11_+_111808017_111808150	0.678782	SOX2.p2	BC035509|DIXDC1|85458|DIX domain containing 1	BC064479|DIXDC1|85458|DIX domain containing 1	BC128600|DIXDC1|85458|DIX domain containing 1
hg19_v1_chr5_-_27038650_27038692	0.677457	SOX2.p2	BC107594|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	BC109384|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	BC113745|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	AB035302|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	AK307779|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	NM_016279|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	AK308697|CDH9|1007|cadherin 9, type 2 (T1-cadherin)
hg19_v1_chr4_+_114214102_114214137	0.673896	SOX2.p2	AK294720|ANK2|287|ankyrin 2, neuronal
hg19_v1_chr8_+_26435590_26435770	0.666749	SOX2.p2	U17279|DPYSL2|1808|dihydropyrimidinase-like 2	AB370194|DPYSL2|1808|dihydropyrimidinase-like 2
hg19_v1_chr1_+_213124008_213124038	0.665454	SOX2.p2	AK302675|VASH2|79805|vasohibin 2
hg19_v1_chr5_-_95158365_95158435	0.663415	SOX2.p2	AF162769|GLRX|2745|glutaredoxin (thioltransferase)	BT006689|GLRX|2745|glutaredoxin (thioltransferase)	CR450312|GLRX|2745|glutaredoxin (thioltransferase)	CR542165|GLRX|2745|glutaredoxin (thioltransferase)	DQ892497|GLRX|2745|glutaredoxin (thioltransferase)	DQ895709|GLRX|2745|glutaredoxin (thioltransferase)	D21238|GLRX|2745|glutaredoxin (thioltransferase)	AF069668|GLRX|2745|glutaredoxin (thioltransferase)	BC106075|GLRX|2745|glutaredoxin (thioltransferase)	X76648|GLRX|2745|glutaredoxin (thioltransferase)	AK311868|GLRX|2745|glutaredoxin (thioltransferase)	BC005304|GLRX|2745|glutaredoxin (thioltransferase)	BC010965|GLRX|2745|glutaredoxin (thioltransferase)
hg19_v1_chr17_-_38821286_38821415	0.661979	SOX2.p2	BX538083|KRT222|125113|keratin 222	EU832123|KRT222|125113|keratin 222	EU832217|KRT222|125113|keratin 222	BC032815|KRT222|125113|keratin 222	AK308598|KRT222|125113|keratin 222	NM_152349|KRT222|125113|keratin 222
hg19_v1_chr2_+_203499667_203499712	0.660891	SOX2.p2	AK096090|FAM117B|150864|family with sequence similarity 117, member B
hg19_v1_chr5_-_111092918_111092954	0.659976	SOX2.p2	AK315617|C5orf13|9315|chromosome 5 open reading frame 13	NM_004772|C5orf13|9315|chromosome 5 open reading frame 13	U30521|C5orf13|9315|chromosome 5 open reading frame 13
hg19_v1_chr14_-_90421032_90421088	0.657693	SOX2.p2	BC001787|EFCAB11|90141|EF-hand calcium binding domain 11	BX247991|EFCAB11|90141|EF-hand calcium binding domain 11	AK298930|EFCAB11|90141|EF-hand calcium binding domain 11	AK094740|EFCAB11|90141|EF-hand calcium binding domain 11	NM_145231|EFCAB11|90141|EF-hand calcium binding domain 11
hg19_v1_chr19_-_6502224_6502411	0.656515	SOX2.p2	EU831818|TUBB4A|10382|tubulin, beta 4A class IVa	EU831895|TUBB4A|10382|tubulin, beta 4A class IVa	BC006570|TUBB4A|10382|tubulin, beta 4A class IVa	AK095202|TUBB4A|10382|tubulin, beta 4A class IVa	AK295917|TUBB4A|10382|tubulin, beta 4A class IVa	AK075307|TUBB4A|10382|tubulin, beta 4A class IVa	BC013683|TUBB4A|10382|tubulin, beta 4A class IVa	NM_006087|TUBB4A|10382|tubulin, beta 4A class IVa	AK293503|TUBB4A|10382|tubulin, beta 4A class IVa
hg19_v1_chr5_+_140557370_140557370	0.656219	SOX2.p2	BC136801|PCDHB8|56128|protocadherin beta 8	NM_019120|PCDHB8|56128|protocadherin beta 8
hg19_v1_chr5_+_140514787_140515017	0.652746	SOX2.p2	AK023190|PCDHB5|26167|protocadherin beta 5	NM_015669|PCDHB5|26167|protocadherin beta 5	BC001186|PCDHB5|26167|protocadherin beta 5	AB209393|PCDHB5|26167|protocadherin beta 5	AF134474|PCDHB5|26167|protocadherin beta 5	AF152498|PCDHB5|26167|protocadherin beta 5	AF217753|PCDHB5|26167|protocadherin beta 5	DQ891873|PCDHB5|26167|protocadherin beta 5	DQ895061|PCDHB5|26167|protocadherin beta 5
hg19_v1_chr7_+_93551015_93551098	0.643263	SOX2.p2	NM_004126|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	BC009709|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11
hg19_v1_chr6_+_15249034_15249192	0.641189	SOX2.p2	AK303610|JARID2|3720|jumonji, AT rich interactive domain 2
hg19_v1_chr16_+_58534045_58534152	0.639728	SOX2.p2	AK055038|NDRG4|65009|NDRG family member 4	AB044944|NDRG4|65009|NDRG family member 4	AB044945|NDRG4|65009|NDRG family member 4	AK131248|NDRG4|65009|NDRG family member 4	AK296415|NDRG4|65009|NDRG family member 4	AK299949|NDRG4|65009|NDRG family member 4	AK316089|NDRG4|65009|NDRG family member 4	NM_001242833|NDRG4|65009|NDRG family member 4	NM_001242834|NDRG4|65009|NDRG family member 4	NM_001242835|NDRG4|65009|NDRG family member 4	NM_001242836|NDRG4|65009|NDRG family member 4	BC011795|NDRG4|65009|NDRG family member 4	AB033006|NDRG4|65009|NDRG family member 4	AL136584|NDRG4|65009|NDRG family member 4	BC001527|NDRG4|65009|NDRG family member 4	AM393094|NDRG4|65009|NDRG family member 4	AM393323|NDRG4|65009|NDRG family member 4
hg19_v1_chr1_+_33722158_33722173	0.638388	SOX2.p2	NM_152493|ZNF362|149076|zinc finger protein 362
hg19_v1_chr9_-_77502635_77502834	0.634857	SOX2.p2	AY333283|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	NM_001177310|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	AF448232|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	AY333282|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	AY333285|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	AY333286|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	AY333287|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	AY333288|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6
hg19_v1_chr19_-_46220589_46220638	0.632902	SOX2.p2	
hg19_v1_chr15_-_34659245_34659915	0.632642	SOX2.p2	AF529233|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	BC144236|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AK290273|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AK308910|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AL832237|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	BC092463|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	NM_153613|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	BC048430|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AY734233|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4	AF542964|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4
hg19_v1_chr8_+_9911797_9911961	0.632105	SOX2.p2	AJ242973|MSRA|4482|methionine sulfoxide reductase A	BC054033|MSRA|4482|methionine sulfoxide reductase A	NM_001135670|MSRA|4482|methionine sulfoxide reductase A	NM_012331|MSRA|4482|methionine sulfoxide reductase A	AF086925|MSRA|4482|methionine sulfoxide reductase A	AF183420|MSRA|4482|methionine sulfoxide reductase A
hg19_v1_chr7_-_83824216_83824429	0.623247	SOX2.p2	NM_006080|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A	AK289954|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
hg19_v1_chr12_+_69633316_69633351	0.620443	SOX2.p2	NM_007007|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	AK223568|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	AK299928|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa
hg19_v1_chr15_-_45670955_45670979	0.617412	SOX2.p2	NM_001482|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)
hg19_v1_chr6_+_167525294_167525294	0.613438	SOX2.p2	NM_004367|CCR6|1235|chemokine (C-C motif) receptor 6
hg19_v1_chr7_-_16844606_16844737	0.613022	SOX2.p2	BC015503|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)	AF115926|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)	AF038451|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)	AK296721|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)	AK312942|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)	AK223067|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)	AF088867|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)	AF087879|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)	AY359009|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)	NM_006408|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)
hg19_v1_chr1_+_244216506_244216581	0.61286	SOX2.p2	BC078175|ZNF238|10472|zinc finger protein 238	AJ001388|ZNF238|10472|zinc finger protein 238	NM_006352|ZNF238|10472|zinc finger protein 238
hg19_v1_chr5_-_111092865_111092908	0.611022	SOX2.p2	BC019068|C5orf13|9315|chromosome 5 open reading frame 13	BX649051|C5orf13|9315|chromosome 5 open reading frame 13	BC072013|C5orf13|9315|chromosome 5 open reading frame 13	BC072443|C5orf13|9315|chromosome 5 open reading frame 13
hg19_v1_chr1_+_244214576_244214591	0.608466	SOX2.p2	AK291408|ZNF238|10472|zinc finger protein 238	AK293892|ZNF238|10472|zinc finger protein 238	BC036677|ZNF238|10472|zinc finger protein 238
hg19_v1_chr5_-_33892292_33892298	0.603693	SOX2.p2	AJ250725|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12
hg19_v1_chr7_-_27213873_27213954	0.603205	SOX2.p2	DQ891906|HOXA10|3206|homeobox A10	DQ895092|HOXA10|3206|homeobox A10	DQ896836|HOXA10|3206|homeobox A10	BC007600|HOXA10|3206|homeobox A10	BC013971|HOXA10|3206|homeobox A10	NM_018951|HOXA10|3206|homeobox A10
hg19_v1_chr13_+_100633416_100633495	0.602768	SOX2.p2	
hg19_v1_chr8_+_26435920_26435934	0.60041	SOX2.p2	NM_001244604|DPYSL2|1808|dihydropyrimidinase-like 2	AK299077|DPYSL2|1808|dihydropyrimidinase-like 2
hg19_v1_chr1_+_244217283_244217307	0.599843	SOX2.p2	
hg19_v1_chr4_+_113970784_113970884	0.598405	SOX2.p2	NM_001148|ANK2|287|ankyrin 2, neuronal	NM_020977|ANK2|287|ankyrin 2, neuronal	AK299767|ANK2|287|ankyrin 2, neuronal	AK307601|ANK2|287|ankyrin 2, neuronal	X56958|ANK2|287|ankyrin 2, neuronal	Z26634|ANK2|287|ankyrin 2, neuronal
hg19_v1_chr3_+_147111221_147111244	0.597165	SOX2.p2	
hg19_v1_chr4_-_186732208_186732224	0.596174	SOX2.p2	BC011883|SORBS2|8470|sorbin and SH3 domain containing 2	NM_001145671|SORBS2|8470|sorbin and SH3 domain containing 2
hg19_v1_chr2_-_21230572_21230702	0.596069	SOX2.p2	X03045|APOB|338|apolipoprotein B (including Ag(x) antigen)
hg19_v1_chr15_+_52043738_52043908	0.589847	SOX2.p2	NM_001142885|TMOD2|29767|tropomodulin 2 (neuronal)	NM_014548|TMOD2|29767|tropomodulin 2 (neuronal)	BC036184|TMOD2|29767|tropomodulin 2 (neuronal)	BC064961|TMOD2|29767|tropomodulin 2 (neuronal)	AF177169|TMOD2|29767|tropomodulin 2 (neuronal)	AK293823|TMOD2|29767|tropomodulin 2 (neuronal)	AK292733|TMOD2|29767|tropomodulin 2 (neuronal)
hg19_v1_chr6_+_30688144_30688304	0.58842	SOX2.p2	BC002347|TUBB|203068|tubulin, beta class I	BC007605|TUBB|203068|tubulin, beta class I	AB062393|TUBB|203068|tubulin, beta class I	BC001938|TUBB|203068|tubulin, beta class I	BC005838|TUBB|203068|tubulin, beta class I	AF070561|TUBB|203068|tubulin, beta class I	AF070593|TUBB|203068|tubulin, beta class I	BC013374|TUBB|203068|tubulin, beta class I	NM_178014|TUBB|203068|tubulin, beta class I	BC021909|TUBB|203068|tubulin, beta class I	BC019924|TUBB|203068|tubulin, beta class I	BC062532|TUBB|203068|tubulin, beta class I	AK297489|TUBB|203068|tubulin, beta class I	DQ891742|TUBB|203068|tubulin, beta class I	DQ891828|TUBB|203068|tubulin, beta class I	DQ894920|TUBB|203068|tubulin, beta class I	V00599|TUBB|203068|tubulin, beta class I
hg19_v1_chr2_+_12857885_12857947	0.58758	SOX2.p2	AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)	BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)
hg19_v1_chrM_-_379_715	0.58653	SOX2.p2	
hg19_v1_chr8_-_80993009_80993050	0.586194	SOX2.p2	AF202897|TPD52|7163|tumor protein D52	EF152584|TPD52|7163|tumor protein D52	NM_001025252|TPD52|7163|tumor protein D52	GQ499324|TPD52|7163|tumor protein D52	GQ499325|TPD52|7163|tumor protein D52	GQ499326|TPD52|7163|tumor protein D52	GQ499327|TPD52|7163|tumor protein D52	GQ499328|TPD52|7163|tumor protein D52
hg19_v1_chr12_+_52347163_52347163	0.582414	SOX2.p2	AK299496|ACVR1B|91|activin A receptor, type IB	NM_020327|ACVR1B|91|activin A receptor, type IB
hg19_v1_chr1_-_53793583_53793742	0.582414	SOX2.p2	Z75190|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	D50678|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	BC051836|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
hg19_v1_chr11_-_66445218_66445305	0.582218	SOX2.p2	AK095158|RBM4B|83759|RNA binding motif protein 4B	BC004951|RBM4B|83759|RNA binding motif protein 4B	NM_031492|RBM4B|83759|RNA binding motif protein 4B
hg19_v1_chr5_-_146435589_146435699	0.580873	SOX2.p2	BC031790|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	NM_181674|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	NM_181676|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta
hg19_v1_chr4_-_76598563_76598596	0.580171	SOX2.p2	BC011731|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	AK291772|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2
hg19_v1_chr17_+_77751929_77752033	0.578738	SOX2.p2	NM_005189|CBX2|84733|chromobox homolog 2	NM_032647|CBX2|84733|chromobox homolog 2	BC004252|CBX2|84733|chromobox homolog 2	BC119759|CBX2|84733|chromobox homolog 2	BC119760|CBX2|84733|chromobox homolog 2	EU446542|CBX2|84733|chromobox homolog 2
hg19_v1_chr19_+_1249882_1249886	0.576836	SOX2.p2	BC060848|MIDN|90007|midnolin	BC094778|MIDN|90007|midnolin
hg19_v1_chr1_-_232651227_232651311	0.575432	SOX2.p2	BC006013|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2	NM_020808|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2	AY168879|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2
hg19_v1_chr1_+_25757381_25757589	0.57047	SOX2.p2	AK311472|TMEM57|55219|transmembrane protein 57	NM_018202|TMEM57|55219|transmembrane protein 57	AY845015|TMEM57|55219|transmembrane protein 57	BC007687|TMEM57|55219|transmembrane protein 57	AK001609|TMEM57|55219|transmembrane protein 57	AY845035|TMEM57|55219|transmembrane protein 57	AY845036|TMEM57|55219|transmembrane protein 57	BC032427|TMEM57|55219|transmembrane protein 57	BC020801|TMEM57|55219|transmembrane protein 57
hg19_v1_chr9_+_2622134_2622188	0.568708	SOX2.p2	AK092381|VLDLR|7436|very low density lipoprotein receptor	D16494|VLDLR|7436|very low density lipoprotein receptor
hg19_v1_chr4_-_76598558_76598562	0.567034	SOX2.p2	AF053535|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	AF145284|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2
hg19_v1_chr11_-_118095708_118095808	0.566709	SOX2.p2	AK090409|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AY138965|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AY358362|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AY093686|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AK298722|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AK300851|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AK301099|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	AJ515553|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	NM_001098526|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1
hg19_v1_chr20_-_45985411_45985566	0.565101	SOX2.p2	AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8	AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8	AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8	AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8	AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8	BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8	BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8	BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8	BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8	NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8	NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8	NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8	BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8
hg19_v1_chr4_+_115543522_115543522	0.564601	SOX2.p2	NM_003360|UGT8|7368|UDP glycosyltransferase 8	U30930|UGT8|7368|UDP glycosyltransferase 8
hg19_v1_chr2_+_12858363_12858432	0.561174	SOX2.p2	
hg19_v1_chr1_-_40367539_40367686	0.561137	SOX2.p2	AK296078|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	BC030694|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	BC011864|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	NM_001033081|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	NM_001033082|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	NM_005376|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)
hg19_v1_chr12_+_9142136_9142231	0.559959	SOX2.p2	AK316337|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	BC012621|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	AK301367|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	AF081675|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	AF097358|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	NM_005810|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	AF034952|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	DQ892820|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	DQ896066|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1
hg19_v1_chr1_-_36097137_36097137	0.558809	SOX2.p2	AK310023|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2	NM_001199780|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2
hg19_v1_chr3_-_14989857_14989930	0.558582	SOX2.p2	AK096279|LOC100505641|100505641|uncharacterized LOC100505641	BC033386|LOC100505641|100505641|uncharacterized LOC100505641
hg19_v1_chr18_-_74728677_74728836	0.557597	SOX2.p2	AK074315|MBP|4155|myelin basic protein
hg19_v1_chr2_+_181845803_181845852	0.556135	SOX2.p2	AK314145|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3
hg19_v1_chr3_+_186358148_186358383	0.553718	SOX2.p2	AF534529|FETUB|26998|fetuin B	AJ242928|FETUB|26998|fetuin B	NM_014375|FETUB|26998|fetuin B	AB017551|FETUB|26998|fetuin B	BC069670|FETUB|26998|fetuin B	BC069820|FETUB|26998|fetuin B	BC114616|FETUB|26998|fetuin B	BC074734|FETUB|26998|fetuin B	AY373820|FETUB|26998|fetuin B	AY373821|FETUB|26998|fetuin B	AK309647|FETUB|26998|fetuin B
hg19_v1_chr10_+_74653338_74653529	0.55215	SOX2.p2	AK096435|OIT3|170392|oncoprotein induced transcript 3	NM_152635|OIT3|170392|oncoprotein induced transcript 3	BC126440|OIT3|170392|oncoprotein induced transcript 3	AY358339|OIT3|170392|oncoprotein induced transcript 3	AY013707|OIT3|170392|oncoprotein induced transcript 3
hg19_v1_chr1_-_217250230_217250311	0.550228	SOX2.p2	AB362218|ESRRG|2104|estrogen-related receptor gamma	AK131193|ESRRG|2104|estrogen-related receptor gamma	NM_001243507|ESRRG|2104|estrogen-related receptor gamma	NM_001243509|ESRRG|2104|estrogen-related receptor gamma
hg19_v1_chr20_+_36149606_36149733	0.548372	SOX2.p2	NM_005386|NNAT|4826|neuronatin	NM_181689|NNAT|4826|neuronatin	AK312069|NNAT|4826|neuronatin	U25034|NNAT|4826|neuronatin	BC001768|NNAT|4826|neuronatin	U25033|NNAT|4826|neuronatin	AB002392|NNAT|4826|neuronatin	BT019426|NNAT|4826|neuronatin
hg19_v1_chr1_+_171283372_171283485	0.543209	SOX2.p2	BC002780|FMO4|2329|flavin containing monooxygenase 4	NM_002022|FMO4|2329|flavin containing monooxygenase 4	Z11737|FMO4|2329|flavin containing monooxygenase 4
hg19_v1_chr14_+_24439082_24439315	0.538542	SOX2.p2	NM_001193636|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	NM_001193637|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	GQ871924|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1	AY616183|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	AY920361|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	AY920362|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	AY943857|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	NM_001193635|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	GQ871921|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1	GU564234|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	GU564235|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2
hg19_v1_chr13_-_99630243_99630337	0.537573	SOX2.p2	AB028981|DOCK9|23348|dedicator of cytokinesis 9	CR936820|DOCK9|23348|dedicator of cytokinesis 9	AK126492|DOCK9|23348|dedicator of cytokinesis 9	NM_001130048|DOCK9|23348|dedicator of cytokinesis 9	NM_001130050|DOCK9|23348|dedicator of cytokinesis 9
hg19_v1_chr19_-_11305186_11305265	0.533909	SOX2.p2	AY639929|KANK2|25959|KN motif and ankyrin repeat domains 2	NM_015493|KANK2|25959|KN motif and ankyrin repeat domains 2
hg19_v1_chr11_+_10830752_10830843	0.533643	SOX2.p2	
hg19_v1_chr13_-_41706587_41707003	0.529009	SOX2.p2	AL833839|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	EU832523|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	EU832605|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	BC051349|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	BC000560|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	AK056633|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	AK299627|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	AK096608|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	NM_152903|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6
hg19_v1_chr12_-_10282680_10282867	0.527105	SOX2.p2	AF400595|CLEC7A|64581|C-type lectin domain family 7, member A	AF400596|CLEC7A|64581|C-type lectin domain family 7, member A	AF400597|CLEC7A|64581|C-type lectin domain family 7, member A	AF400598|CLEC7A|64581|C-type lectin domain family 7, member A	AF400599|CLEC7A|64581|C-type lectin domain family 7, member A	AF400600|CLEC7A|64581|C-type lectin domain family 7, member A	AF400601|CLEC7A|64581|C-type lectin domain family 7, member A	AF400602|CLEC7A|64581|C-type lectin domain family 7, member A	AY026769|CLEC7A|64581|C-type lectin domain family 7, member A	AY026770|CLEC7A|64581|C-type lectin domain family 7, member A	AY026771|CLEC7A|64581|C-type lectin domain family 7, member A	AF313469|CLEC7A|64581|C-type lectin domain family 7, member A	BC013385|CLEC7A|64581|C-type lectin domain family 7, member A	AY009090|CLEC7A|64581|C-type lectin domain family 7, member A	AK297028|CLEC7A|64581|C-type lectin domain family 7, member A	BC093829|CLEC7A|64581|C-type lectin domain family 7, member A	BC093831|CLEC7A|64581|C-type lectin domain family 7, member A	BC071746|CLEC7A|64581|C-type lectin domain family 7, member A	AK298679|CLEC7A|64581|C-type lectin domain family 7, member A	AK298724|CLEC7A|64581|C-type lectin domain family 7, member A	AK313247|CLEC7A|64581|C-type lectin domain family 7, member A	CR749536|CLEC7A|64581|C-type lectin domain family 7, member A	AK295108|CLEC7A|64581|C-type lectin domain family 7, member A	AF313468|CLEC7A|64581|C-type lectin domain family 7, member A	AJ312372|CLEC7A|64581|C-type lectin domain family 7, member A	AJ312373|CLEC7A|64581|C-type lectin domain family 7, member A	AY359002|CLEC7A|64581|C-type lectin domain family 7, member A	AK294111|CLEC7A|64581|C-type lectin domain family 7, member A	NM_022570|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197947|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197948|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197949|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197950|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197954|CLEC7A|64581|C-type lectin domain family 7, member A
hg19_v1_chr14_-_60097314_60097374	0.523804	SOX2.p2	BC000314|RTN1|6252|reticulon 1	BC003003|RTN1|6252|reticulon 1	AK297492|RTN1|6252|reticulon 1
hg19_v1_chr2_+_177028804_177028804	0.521247	SOX2.p2	BC005124|HOXD3|3232|homeobox D3	NM_006898|HOXD3|3232|homeobox D3
hg19_v1_chrX_+_28605558_28605680	0.520754	SOX2.p2	AF181284|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1	AJ243874|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1	NM_014271|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1
hg19_v1_chr2_+_10262694_10262824	0.519293	SOX2.p2	NM_001165931|RRM2|6241|ribonucleotide reductase M2	S40301|RRM2|6241|ribonucleotide reductase M2	X59618|RRM2|6241|ribonucleotide reductase M2
hg19_v1_chr8_+_79428335_79428335	0.519236	SOX2.p2	NM_006823|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	NM_181839|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	S76965|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha
hg19_v1_chr2_+_10262853_10262925	0.518684	SOX2.p2	NM_001034|RRM2|6241|ribonucleotide reductase M2	AK092671|RRM2|6241|ribonucleotide reductase M2	AK123010|RRM2|6241|ribonucleotide reductase M2	AK313719|RRM2|6241|ribonucleotide reductase M2	BC030154|RRM2|6241|ribonucleotide reductase M2	BC001886|RRM2|6241|ribonucleotide reductase M2	DQ891863|RRM2|6241|ribonucleotide reductase M2	DQ895052|RRM2|6241|ribonucleotide reductase M2
hg19_v1_chr6_+_30688085_30688141	0.5133	SOX2.p2	AK303227|TUBB|203068|tubulin, beta class I	BC020946|TUBB|203068|tubulin, beta class I	AK297638|TUBB|203068|tubulin, beta class I	AK098772|TUBB|203068|tubulin, beta class I	AK316265|TUBB|203068|tubulin, beta class I	BC103746|TUBB|203068|tubulin, beta class I	AF070600|TUBB|203068|tubulin, beta class I	AF141349|TUBB|203068|tubulin, beta class I	BC070326|TUBB|203068|tubulin, beta class I
hg19_v1_chr3_-_186262114_186262166	0.508173	SOX2.p2	AF161703|CRYGS|1427|crystallin, gamma S	BC069478|CRYGS|1427|crystallin, gamma S	AK314172|CRYGS|1427|crystallin, gamma S	NM_017541|CRYGS|1427|crystallin, gamma S
hg19_v1_chr5_-_33891967_33892123	0.507129	SOX2.p2	BC139900|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	BC131733|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	AY358745|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	BC058841|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	NM_030955|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12
hg19_v1_chr1_+_90098693_90098836	0.5071	SOX2.p2	AK127881|LRRC8C|84230|leucine rich repeat containing 8 family, member C	AB081509|LRRC8C|84230|leucine rich repeat containing 8 family, member C	BC103929|LRRC8C|84230|leucine rich repeat containing 8 family, member C	BC113973|LRRC8C|84230|leucine rich repeat containing 8 family, member C
hg19_v1_chr9_+_4490193_4490681	0.50688	SOX2.p2	NM_004170|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	BC033040|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	AB008536|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	U08989|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	AK313013|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	U06469|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	U03506|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	DQ892425|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	DQ895639|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
hg19_v1_chr5_+_140180782_140180782	0.504778	SOX2.p2	AF152311|PCDHA3|56145|protocadherin alpha 3	AF152481|PCDHA3|56145|protocadherin alpha 3	BC069064|PCDHA3|56145|protocadherin alpha 3	BC129807|PCDHA3|56145|protocadherin alpha 3	NM_018906|PCDHA3|56145|protocadherin alpha 3	NM_031497|PCDHA3|56145|protocadherin alpha 3
hg19_v1_chr1_-_173174611_173174696	0.504205	SOX2.p2	AK297932|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4	BC041663|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4
hg19_v1_chr6_-_75965845_75965927	0.501703	SOX2.p2	AJ420517|TMEM30A|55754|transmembrane protein 30A
hg19_v1_chr12_-_6772252_6772360	0.500055	SOX2.p2	BC013038|ING4|51147|inhibitor of growth family, member 4	AB197695|ING4|51147|inhibitor of growth family, member 4	AB197696|ING4|51147|inhibitor of growth family, member 4	AB197697|ING4|51147|inhibitor of growth family, member 4	EF152349|ING4|51147|inhibitor of growth family, member 4	EF152350|ING4|51147|inhibitor of growth family, member 4	EF152351|ING4|51147|inhibitor of growth family, member 4	EF152352|ING4|51147|inhibitor of growth family, member 4	BC007781|ING4|51147|inhibitor of growth family, member 4	BC095434|ING4|51147|inhibitor of growth family, member 4	AK313621|ING4|51147|inhibitor of growth family, member 4	AF110645|ING4|51147|inhibitor of growth family, member 4	AF156552|ING4|51147|inhibitor of growth family, member 4	AF063594|ING4|51147|inhibitor of growth family, member 4	AK293169|ING4|51147|inhibitor of growth family, member 4	AK303354|ING4|51147|inhibitor of growth family, member 4	NM_001127582|ING4|51147|inhibitor of growth family, member 4	NM_001127583|ING4|51147|inhibitor of growth family, member 4	NM_001127584|ING4|51147|inhibitor of growth family, member 4	NM_001127585|ING4|51147|inhibitor of growth family, member 4	NM_001127586|ING4|51147|inhibitor of growth family, member 4	NM_016162|ING4|51147|inhibitor of growth family, member 4
hg19_v1_chr11_-_66445318_66445397	0.499523	SOX2.p2	BC003503|RBM4B|83759|RNA binding motif protein 4B
hg19_v1_chr9_+_2622099_2622126	0.499409	SOX2.p2	S73849|VLDLR|7436|very low density lipoprotein receptor	D16493|VLDLR|7436|very low density lipoprotein receptor	BC142653|VLDLR|7436|very low density lipoprotein receptor
hg19_v1_chr4_-_76598611_76598693	0.497212	SOX2.p2	NM_203504|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	NM_203505|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2
hg19_v1_chr2_+_203499819_203499900	0.49711	SOX2.p2	NM_173511|FAM117B|150864|family with sequence similarity 117, member B
hg19_v1_chr2_-_190044330_190044604	0.497109	SOX2.p2	J04478|COL5A2|1290|collagen, type V, alpha 2	Y14690|COL5A2|1290|collagen, type V, alpha 2	AB209045|COL5A2|1290|collagen, type V, alpha 2	BC086874|COL5A2|1290|collagen, type V, alpha 2	AK297936|COL5A2|1290|collagen, type V, alpha 2	AK300146|COL5A2|1290|collagen, type V, alpha 2	M31365|COL5A2|1290|collagen, type V, alpha 2	NM_000393|COL5A2|1290|collagen, type V, alpha 2
hg19_v1_chr3_-_167813058_167813173	0.494626	SOX2.p2	U55853|GOLIM4|27333|golgi integral membrane protein 4	BC143232|GOLIM4|27333|golgi integral membrane protein 4	BC143233|GOLIM4|27333|golgi integral membrane protein 4	BC171748|GOLIM4|27333|golgi integral membrane protein 4
hg19_v1_chrX_-_135962853_135962863	0.494594	SOX2.p2	
hg19_v1_chr12_+_53491448_53491506	0.493642	SOX2.p2	M62402|IGFBP6|3489|insulin-like growth factor binding protein 6	AK313158|IGFBP6|3489|insulin-like growth factor binding protein 6	BC003507|IGFBP6|3489|insulin-like growth factor binding protein 6	BC011708|IGFBP6|3489|insulin-like growth factor binding protein 6	BC005007|IGFBP6|3489|insulin-like growth factor binding protein 6	DQ892995|IGFBP6|3489|insulin-like growth factor binding protein 6	DQ896243|IGFBP6|3489|insulin-like growth factor binding protein 6	CR541791|IGFBP6|3489|insulin-like growth factor binding protein 6	M69054|IGFBP6|3489|insulin-like growth factor binding protein 6
hg19_v1_chr5_+_140207562_140207676	0.493581	SOX2.p2	BC036674|PCDHA6|56142|protocadherin alpha 6	AF169694|PCDHA6|56142|protocadherin alpha 6	NM_018909|PCDHA6|56142|protocadherin alpha 6	NM_031848|PCDHA6|56142|protocadherin alpha 6	NM_031849|PCDHA6|56142|protocadherin alpha 6	AF152314|PCDHA6|56142|protocadherin alpha 6	AF152484|PCDHA6|56142|protocadherin alpha 6
hg19_v1_chr7_+_95115212_95115374	0.491973	SOX2.p2	BC113479|ASB4|51666|ankyrin repeat and SOCS box containing 4	BC113481|ASB4|51666|ankyrin repeat and SOCS box containing 4	NM_016116|ASB4|51666|ankyrin repeat and SOCS box containing 4	NM_145872|ASB4|51666|ankyrin repeat and SOCS box containing 4	AF156779|ASB4|51666|ankyrin repeat and SOCS box containing 4	HQ258383|ASB4|51666|ankyrin repeat and SOCS box containing 4	BC025024|ASB4|51666|ankyrin repeat and SOCS box containing 4
hg19_v1_chr4_-_76598289_76598344	0.490053	SOX2.p2	AB014560|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	AK291786|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	NM_012297|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2
hg19_v1_chr5_+_140560979_140560979	0.489871	SOX2.p2	AB046841|PCDHB16|57717|protocadherin beta 16	NM_020957|PCDHB16|57717|protocadherin beta 16
hg19_v1_chr4_-_164534656_164534775	0.488994	SOX2.p2	AK000675|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	AK301408|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	NM_017923|MARCH1|55016|membrane-associated ring finger (C3HC4) 1
hg19_v1_chr10_+_91174438_91174539	0.48753	SOX2.p2	U34605|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5	AK312358|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5	AK293346|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5
hg19_v1_chr17_-_10372875_10372875	0.487318	SOX2.p2	AF111783|MYH4|4622|myosin, heavy chain 4, skeletal muscle	NM_017533|MYH4|4622|myosin, heavy chain 4, skeletal muscle
hg19_v1_chr9_-_77503009_77503009	0.486897	SOX2.p2	AF350881|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	AK057748|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	NM_017662|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6
hg19_v1_chr10_-_14646237_14646398	0.486765	SOX2.p2	BC064407|FAM107B|83641|family with sequence similarity 107, member B
hg19_v1_chr3_+_181429711_181429715	0.485553	SOX2.p2	NM_003106|SOX2|6657|SRY (sex determining region Y)-box 2
hg19_v1_chr7_+_16793320_16793592	0.485201	SOX2.p2	AK093487|TSPAN13|27075|tetraspanin 13	NM_014399|TSPAN13|27075|tetraspanin 13	AK026587|TSPAN13|27075|tetraspanin 13	AK075475|TSPAN13|27075|tetraspanin 13	AK316595|TSPAN13|27075|tetraspanin 13	AY358995|TSPAN13|27075|tetraspanin 13	AF100759|TSPAN13|27075|tetraspanin 13	BC033863|TSPAN13|27075|tetraspanin 13	AF120265|TSPAN13|27075|tetraspanin 13	DQ892059|TSPAN13|27075|tetraspanin 13	DQ895252|TSPAN13|27075|tetraspanin 13	CR542107|TSPAN13|27075|tetraspanin 13
hg19_v1_chr3_-_169487602_169487682	0.483996	SOX2.p2	BC007289|ARPM1|84517|actin related protein M1	AK055346|ARPM1|84517|actin related protein M1	NM_032487|ARPM1|84517|actin related protein M1
hg19_v1_chr15_+_45248902_45248914	0.479048	SOX2.p2	BC029537|C15orf43|145645|chromosome 15 open reading frame 43	NM_152448|C15orf43|145645|chromosome 15 open reading frame 43	DQ890983|C15orf43|145645|chromosome 15 open reading frame 43	DQ894158|C15orf43|145645|chromosome 15 open reading frame 43
hg19_v1_chr5_+_140749830_140749961	0.478595	SOX2.p2	BC150172|PCDHGB3|56102|protocadherin gamma subfamily B, 3	AF152332|PCDHGB3|56102|protocadherin gamma subfamily B, 3	AF152519|PCDHGB3|56102|protocadherin gamma subfamily B, 3	NM_018924|PCDHGB3|56102|protocadherin gamma subfamily B, 3	NM_032097|PCDHGB3|56102|protocadherin gamma subfamily B, 3
hg19_v1_chr6_+_27107060_27107087	0.476414	SOX2.p2	BC016336|HIST1H4I|8294|histone cluster 1, H4i	BC075806|HIST1H4I|8294|histone cluster 1, H4i	BC066250|HIST1H4I|8294|histone cluster 1, H4i	BC067496|HIST1H4I|8294|histone cluster 1, H4i	BC067497|HIST1H4I|8294|histone cluster 1, H4i	HQ257982|HIST2H4B|554313|histone cluster 2, H4b	NM_003495|HIST1H4I|8294|histone cluster 1, H4i
hg19_v1_chr12_-_10251520_10251663	0.476099	SOX2.p2	DQ892440|CLEC1A|51267|C-type lectin domain family 1, member A	DQ895651|CLEC1A|51267|C-type lectin domain family 1, member A	AK300979|CLEC1A|51267|C-type lectin domain family 1, member A	AK291584|CLEC1A|51267|C-type lectin domain family 1, member A	BC039072|CLEC1A|51267|C-type lectin domain family 1, member A	AK313589|CLEC1A|51267|C-type lectin domain family 1, member A	AK075114|CLEC1A|51267|C-type lectin domain family 1, member A	BC067746|CLEC1A|51267|C-type lectin domain family 1, member A	AF200949|CLEC1A|51267|C-type lectin domain family 1, member A	NM_016511|CLEC1A|51267|C-type lectin domain family 1, member A	AK091989|CLEC1A|51267|C-type lectin domain family 1, member A	AY358587|CLEC1A|51267|C-type lectin domain family 1, member A
hg19_v1_chrX_-_10645726_10645787	0.475725	SOX2.p2	AF041206|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001098624|MID1|4281|midline 1 (Opitz/BBB syndrome)	AK299061|MID1|4281|midline 1 (Opitz/BBB syndrome)
hg19_v1_chr7_-_11871735_11871844	0.474174	SOX2.p2	AK092252|THSD7A|221981|thrombospondin, type I, domain containing 7A	NM_015204|THSD7A|221981|thrombospondin, type I, domain containing 7A
hg19_v1_chr1_+_90098643_90098648	0.473871	SOX2.p2	NM_032270|LRRC8C|84230|leucine rich repeat containing 8 family, member C
hg19_v1_chr21_+_37442298_37442413	0.4715	SOX2.p2	AK294142|CBR1|873|carbonyl reductase 1	J04056|CBR1|873|carbonyl reductase 1	AK308691|CBR1|873|carbonyl reductase 1	AK311219|CBR1|873|carbonyl reductase 1	BC015640|CBR1|873|carbonyl reductase 1	AK314879|CBR1|873|carbonyl reductase 1	BC002511|CBR1|873|carbonyl reductase 1	DQ892353|CBR1|873|carbonyl reductase 1	DQ895559|CBR1|873|carbonyl reductase 1	BT019843|CBR1|873|carbonyl reductase 1	CR541708|CBR1|873|carbonyl reductase 1
hg19_v1_chr11_-_126225445_126225481	0.469473	SOX2.p2	AK096370|FLJ39051|399972|uncharacterized LOC399972
hg19_v1_chr4_-_165304406_165304406	0.469219	SOX2.p2	AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1
hg19_v1_chr18_-_21852189_21852195	0.468676	SOX2.p2	AF274714|OSBPL1A|114876|oxysterol binding protein-like 1A	NM_018030|OSBPL1A|114876|oxysterol binding protein-like 1A
hg19_v1_chr2_-_86564632_86564835	0.467652	SOX2.p2	AY562239|REEP1|65055|receptor accessory protein 1	CR457301|REEP1|65055|receptor accessory protein 1	AK297201|REEP1|65055|receptor accessory protein 1	BC064846|REEP1|65055|receptor accessory protein 1	AK294300|REEP1|65055|receptor accessory protein 1	AK297359|REEP1|65055|receptor accessory protein 1	AK297373|REEP1|65055|receptor accessory protein 1	AK299334|REEP1|65055|receptor accessory protein 1	AK023172|REEP1|65055|receptor accessory protein 1	NM_001164731|REEP1|65055|receptor accessory protein 1	NM_001164732|REEP1|65055|receptor accessory protein 1	NM_022912|REEP1|65055|receptor accessory protein 1
hg19_v1_chr4_+_41614911_41614927	0.467257	SOX2.p2	AK298915|LIMCH1|22998|LIM and calponin homology domains 1	AK299297|LIMCH1|22998|LIM and calponin homology domains 1	BC068200|LIMCH1|22998|LIM and calponin homology domains 1	BX537916|LIMCH1|22998|LIM and calponin homology domains 1	CR749205|LIMCH1|22998|LIM and calponin homology domains 1	NM_001112719|LIMCH1|22998|LIM and calponin homology domains 1	NM_001112720|LIMCH1|22998|LIM and calponin homology domains 1
hg19_v1_chr21_+_37442221_37442285	0.466741	SOX2.p2	AB124848|CBR1|873|carbonyl reductase 1	NM_001757|CBR1|873|carbonyl reductase 1
hg19_v1_chr5_-_95158465_95158576	0.466556	SOX2.p2	NM_001118890|GLRX|2745|glutaredoxin (thioltransferase)	NM_001243658|GLRX|2745|glutaredoxin (thioltransferase)	NM_001243659|GLRX|2745|glutaredoxin (thioltransferase)	NM_002064|GLRX|2745|glutaredoxin (thioltransferase)
hg19_v1_chr9_-_107690526_107690532	0.465146	SOX2.p2	NM_005502|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1
hg19_v1_chr3_-_125655881_125655886	0.46376	SOX2.p2	BC073816|ALG1L|200810|asparagine-linked glycosylation 1-like	NM_001015050|ALG1L|200810|asparagine-linked glycosylation 1-like	NM_001195223|ALG1L|200810|asparagine-linked glycosylation 1-like
hg19_v1_chr1_+_84768333_84768333	0.462319	SOX2.p2	BC037973|SAMD13|148418|sterile alpha motif domain containing 13	NM_001134664|SAMD13|148418|sterile alpha motif domain containing 13
hg19_v1_chr2_+_208394692_208394750	0.461459	SOX2.p2	X55545|CREB1|1385|cAMP responsive element binding protein 1	M27691|CREB1|1385|cAMP responsive element binding protein 1
hg19_v1_chr10_-_103874661_103874795	0.459461	SOX2.p2	BC000482|LDB1|8861|LIM domain binding 1	BC009246|LDB1|8861|LIM domain binding 1	NM_003893|LDB1|8861|LIM domain binding 1
hg19_v1_chr16_-_4852856_4852941	0.454821	SOX2.p2	
hg19_v1_chr10_-_5060191_5060206	0.454161	SOX2.p2	BC063574|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK091194|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	NM_001354|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	NM_205845|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)
hg19_v1_chr3_-_14988976_14989098	0.453449	SOX2.p2	AK055924|LOC100505641|100505641|uncharacterized LOC100505641
hg19_v1_chr6_-_42419782_42419864	0.449882	SOX2.p2	AF297872|TRERF1|55809|transcriptional regulating factor 1	NM_033502|TRERF1|55809|transcriptional regulating factor 1	AM404182|TRERF1|55809|transcriptional regulating factor 1	AM404183|TRERF1|55809|transcriptional regulating factor 1	AM404259|TRERF1|55809|transcriptional regulating factor 1	AK308473|TRERF1|55809|transcriptional regulating factor 1
hg19_v1_chr2_+_12856813_12857693	0.449027	SOX2.p2	NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)	AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)	AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)	D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)
hg19_v1_chr2_+_181845605_181845681	0.448282	SOX2.p2	AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3	BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3	AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3
hg19_v1_chr8_-_102803178_102803188	0.447115	SOX2.p2	AB209015|NCALD|83988|neurocalcin delta	AL136612|NCALD|83988|neurocalcin delta
hg19_v1_chr15_+_52311438_52311484	0.446496	SOX2.p2	BC035492|MAPK6|5597|mitogen-activated protein kinase 6
hg19_v1_chr3_+_181417387_181417398	0.44614	SOX2.p2	BC016393|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)	AL157425|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)
hg19_v1_chr20_-_5100443_5100668	0.445786	SOX2.p2	CR536501|PCNA|5111|proliferating cell nuclear antigen	CR541799|PCNA|5111|proliferating cell nuclear antigen	DQ891403|PCNA|5111|proliferating cell nuclear antigen	DQ894581|PCNA|5111|proliferating cell nuclear antigen	M15796|PCNA|5111|proliferating cell nuclear antigen	BC000491|PCNA|5111|proliferating cell nuclear antigen	BC062439|PCNA|5111|proliferating cell nuclear antigen	D28458|PCNA|5111|proliferating cell nuclear antigen	AK313286|PCNA|5111|proliferating cell nuclear antigen	NM_182649|PCNA|5111|proliferating cell nuclear antigen
hg19_v1_chr14_+_85996512_85996571	0.445374	SOX2.p2	BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2
hg19_v1_chr7_-_117513466_117513496	0.445171	SOX2.p2	AB051545|CTTNBP2|83992|cortactin binding protein 2	AK308081|CTTNBP2|83992|cortactin binding protein 2	AK091548|CTTNBP2|83992|cortactin binding protein 2
hg19_v1_chr22_-_19512859_19512859	0.441943	SOX2.p2	AK092561|CLDN5|7122|claudin 5	NM_001130861|CLDN5|7122|claudin 5	NM_003277|CLDN5|7122|claudin 5
hg19_v1_chr9_+_127420690_127420719	0.441336	SOX2.p2	AB593023|MIR181A2HG|100379345|MIR181A2 host gene (non-protein coding)
hg19_v1_chr3_+_44626453_44626459	0.441207	SOX2.p2	AK094189|ZNF660|285349|zinc finger protein 660	NM_173658|ZNF660|285349|zinc finger protein 660
hg19_v1_chr5_+_126112847_126112918	0.44101	SOX2.p2	AK312603|LMNB1|4001|lamin B1	M34458|LMNB1|4001|lamin B1	BC012295|LMNB1|4001|lamin B1	BC078178|LMNB1|4001|lamin B1
hg19_v1_chr8_-_102803438_102803438	0.439465	SOX2.p2	NM_032041|NCALD|83988|neurocalcin delta
hg19_v1_chr14_-_47812394_47812437	0.434998	SOX2.p2	BC028193|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2	NM_182830|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2
hg19_v1_chr12_+_69633352_69633426	0.432937	SOX2.p2	BC005000|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	BC000714|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	X67337|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	AK292024|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	DQ892159|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	EU176688|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa
hg19_v1_chr12_+_54378929_54379043	0.431921	SOX2.p2	AK313759|HOXC10|3226|homeobox C10	NM_017409|HOXC10|3226|homeobox C10	BC001293|HOXC10|3226|homeobox C10	AF255675|HOXC10|3226|homeobox C10	BT009921|HOXC10|3226|homeobox C10
hg19_v1_chr16_-_71610948_71610997	0.431496	SOX2.p2	X55675|TAT|6898|tyrosine aminotransferase	BC130534|TAT|6898|tyrosine aminotransferase	BC020707|TAT|6898|tyrosine aminotransferase	BC022292|TAT|6898|tyrosine aminotransferase	X52520|TAT|6898|tyrosine aminotransferase	AK313380|TAT|6898|tyrosine aminotransferase	NM_000353|TAT|6898|tyrosine aminotransferase
hg19_v1_chr20_+_32250089_32250141	0.430799	SOX2.p2	DQ080434|C20orf144|128864|chromosome 20 open reading frame 144	NM_080825|C20orf144|128864|chromosome 20 open reading frame 144	BC032818|C20orf144|128864|chromosome 20 open reading frame 144
hg19_v1_chr7_+_89843133_89843133	0.430566	SOX2.p2	AF526382|STEAP2|261729|STEAP family member 2, metalloreductase	AY358267|STEAP2|261729|STEAP family member 2, metalloreductase	NM_001040666|STEAP2|261729|STEAP family member 2, metalloreductase
hg19_v1_chr14_-_95608054_95608054	0.429426	SOX2.p2	AB028449|DICER1|23405|dicer 1, ribonuclease type III	NM_030621|DICER1|23405|dicer 1, ribonuclease type III
hg19_v1_chr1_+_26437655_26437655	0.429031	SOX2.p2	NM_001243532|PDIK1L|149420|PDLIM1 interacting kinase 1 like
hg19_v1_chrX_-_99891690_99891847	0.42732	SOX2.p2	BT006977|TSPAN6|7105|tetraspanin 6	CR457115|TSPAN6|7105|tetraspanin 6	DQ890668|TSPAN6|7105|tetraspanin 6	DQ893849|TSPAN6|7105|tetraspanin 6	AF053453|TSPAN6|7105|tetraspanin 6	AK299176|TSPAN6|7105|tetraspanin 6	AF133426|TSPAN6|7105|tetraspanin 6	AK309581|TSPAN6|7105|tetraspanin 6	AY358825|TSPAN6|7105|tetraspanin 6	AB097016|TSPAN6|7105|tetraspanin 6	AF043906|TSPAN6|7105|tetraspanin 6	U84895|TSPAN6|7105|tetraspanin 6	BC012389|TSPAN6|7105|tetraspanin 6	NM_003270|TSPAN6|7105|tetraspanin 6	AK075072|TSPAN6|7105|tetraspanin 6	AB209876|TSPAN6|7105|tetraspanin 6	AK315773|TSPAN6|7105|tetraspanin 6	AK300852|TSPAN6|7105|tetraspanin 6
hg19_v1_chr6_+_135502521_135502651	0.42711	SOX2.p2	AJ616235|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	M15024|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ616791|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AF104863|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787443|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787444|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787445|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787446|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787447|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787448|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787449|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787450|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787451|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787452|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787453|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787454|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787455|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787456|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787457|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787458|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787459|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787460|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787461|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787462|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787463|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787464|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787465|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787466|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787467|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787468|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787469|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787470|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787471|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787472|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787473|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787474|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787475|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)
hg19_v1_chr11_+_124120422_124120422	0.426438	SOX2.p2	NM_001002905|OR8G1|26494|olfactory receptor, family 8, subfamily G, member 1
hg19_v1_chr22_-_42336222_42336222	0.425166	SOX2.p2	EU035297|CENPM|79019|centromere protein M	NM_001110215|CENPM|79019|centromere protein M
hg19_v1_chr10_+_91174303_91174384	0.425113	SOX2.p2	NM_012420|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5	BC025786|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5
hg19_v1_chrX_+_70443055_70443146	0.424701	SOX2.p2	NM_000166|GJB1|2705|gap junction protein, beta 1, 32kDa	BC022426|GJB1|2705|gap junction protein, beta 1, 32kDa	AK313474|GJB1|2705|gap junction protein, beta 1, 32kDa	BC002805|GJB1|2705|gap junction protein, beta 1, 32kDa
hg19_v1_chr9_-_73483933_73483988	0.422962	SOX2.p2	BC067733|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	AF325212|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	AK021788|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	AK225732|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	BC094699|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_001007470|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_020952|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_024971|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206944|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206945|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206946|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206947|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206948|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	BC142972|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3
hg19_v1_chr6_+_26251826_26251878	0.42214	SOX2.p2	AK312052|HIST1H2BH|8345|histone cluster 1, H2bh	BC096116|HIST1H2BH|8345|histone cluster 1, H2bh	BC096117|HIST1H2BH|8345|histone cluster 1, H2bh	BC096118|HIST1H2BH|8345|histone cluster 1, H2bh	BC096119|HIST1H2BH|8345|histone cluster 1, H2bh	NM_003524|HIST1H2BH|8345|histone cluster 1, H2bh
hg19_v1_chr9_+_36036900_36036994	0.420895	SOX2.p2	AK292653|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	NM_021111|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	AK315073|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC050306|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC032240|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC060806|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC137093|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs
hg19_v1_chr6_+_41040713_41040732	0.419635	SOX2.p2	X59711|NFYA|4800|nuclear transcription factor Y, alpha
hg19_v1_chr2_+_208394756_208394806	0.419337	SOX2.p2	BC010636|CREB1|1385|cAMP responsive element binding protein 1	AK298740|CREB1|1385|cAMP responsive element binding protein 1
hg19_v1_chr1_-_23886284_23886284	0.418381	SOX2.p2	NM_002167|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	X69111|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
hg19_v1_chr21_-_40721010_40721050	0.415605	SOX2.p2	NM_004965|HMGN1|3150|high mobility group nucleosome binding domain 1	BC107741|HMGN1|3150|high mobility group nucleosome binding domain 1
hg19_v1_chr11_-_118084073_118084073	0.414633	SOX2.p2	AK094399|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	NM_153206|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1
hg19_v1_chr11_+_57365026_57365209	0.414159	SOX2.p2	NM_000062|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AK303809|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AK312626|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AK293054|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AK303840|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AB209826|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	M13656|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	M13690|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1
hg19_v1_chr5_+_126112819_126112844	0.414043	SOX2.p2	BC103723|LMNB1|4001|lamin B1	AK303084|LMNB1|4001|lamin B1	NM_001198557|LMNB1|4001|lamin B1
hg19_v1_chr15_+_96869156_96869166	0.413666	SOX2.p2	BC106083|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	NM_001145155|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	FM208183|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2
hg19_v1_chr10_-_103874589_103874649	0.41311	SOX2.p2	AK300588|LDB1|8861|LIM domain binding 1
hg19_v1_chr6_+_135502445_135502452	0.412451	SOX2.p2	AJ606317|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606318|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606319|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606320|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606321|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606322|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606323|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606324|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001130172|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001130173|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161656|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161657|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161658|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161659|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161660|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_005375|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	X52125|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)
hg19_v1_chr12_-_47219734_47219779	0.410935	SOX2.p2	AF305814|SLC38A4|55089|solute carrier family 38, member 4	AF193836|SLC38A4|55089|solute carrier family 38, member 4	AK001053|SLC38A4|55089|solute carrier family 38, member 4	AK291168|SLC38A4|55089|solute carrier family 38, member 4	NM_001143824|SLC38A4|55089|solute carrier family 38, member 4	NM_018018|SLC38A4|55089|solute carrier family 38, member 4
hg19_v1_chr16_-_75529278_75529281	0.40815	SOX2.p2	
hg19_v1_chr16_-_30798206_30798588	0.40814	SOX2.p2	AB002324|ZNF629|23361|zinc finger protein 629	NM_001080417|ZNF629|23361|zinc finger protein 629
hg19_v1_chrX_-_24665225_24665425	0.406016	SOX2.p2	AF148464|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AF052510|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg19_v1_chr5_+_126113050_126113199	0.405922	SOX2.p2	DQ891592|LMNB1|4001|lamin B1	EU176582|LMNB1|4001|lamin B1
hg19_v1_chr13_+_39612440_39612631	0.405907	SOX2.p2	AL833329|NHLRC3|387921|NHL repeat containing 3	NM_001012754|NHLRC3|387921|NHL repeat containing 3	NM_001017370|NHLRC3|387921|NHL repeat containing 3	BX648122|NHLRC3|387921|NHL repeat containing 3	BC052492|NHLRC3|387921|NHL repeat containing 3	BC140877|NHLRC3|387921|NHL repeat containing 3	BC140878|NHLRC3|387921|NHL repeat containing 3	CR749318|NHLRC3|387921|NHL repeat containing 3	AK300260|NHLRC3|387921|NHL repeat containing 3	AK299198|NHLRC3|387921|NHL repeat containing 3	BX647872|NHLRC3|387921|NHL repeat containing 3
hg19_v1_chr13_+_52158483_52158591	0.405801	SOX2.p2	NM_052950|WDFY2|115825|WD repeat and FYVE domain containing 2
hg19_v1_chr5_+_140174443_140174549	0.405179	SOX2.p2	BC003126|PCDHA2|56146|protocadherin alpha 2	NM_018905|PCDHA2|56146|protocadherin alpha 2	NM_031495|PCDHA2|56146|protocadherin alpha 2	AF152310|PCDHA2|56146|protocadherin alpha 2	AF152480|PCDHA2|56146|protocadherin alpha 2
hg19_v1_chr19_-_36233311_36233350	0.402065	SOX2.p2	BC126481|IGFLR1|79713|IGF-like family receptor 1	BC126483|IGFLR1|79713|IGF-like family receptor 1	BC144205|IGFLR1|79713|IGF-like family receptor 1	AX775837|IGFLR1|79713|IGF-like family receptor 1	AK026226|IGFLR1|79713|IGF-like family receptor 1	NM_024660|IGFLR1|79713|IGF-like family receptor 1
hg19_v1_chr13_-_31040035_31040081	0.400558	SOX2.p2	AK057120|HMGB1|3146|high mobility group box 1	AK310975|HMGB1|3146|high mobility group box 1	AK291494|HMGB1|3146|high mobility group box 1	AK304506|HMGB1|3146|high mobility group box 1	NM_002128|HMGB1|3146|high mobility group box 1
hg19_v1_chrX_+_149613719_149613846	0.400406	SOX2.p2	NM_001177466|MAMLD1|10046|mastermind-like domain containing 1	NM_005491|MAMLD1|10046|mastermind-like domain containing 1	U46023|MAMLD1|10046|mastermind-like domain containing 1	BC136324|MAMLD1|10046|mastermind-like domain containing 1	AK315217|MAMLD1|10046|mastermind-like domain containing 1
hg19_v1_chr3_-_14989616_14989659	0.399954	SOX2.p2	BC008609|LOC100505641|100505641|uncharacterized LOC100505641
hg19_v1_chr18_+_11751470_11751561	0.39988	SOX2.p2	AK313902|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	AK290054|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	NM_001142339|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	NM_002071|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type
hg19_v1_chr6_-_79944397_79944454	0.399761	SOX2.p2	AK315391|HMGN3|9324|high mobility group nucleosomal binding domain 3	AY043282|HMGN3|9324|high mobility group nucleosomal binding domain 3	NM_001201362|HMGN3|9324|high mobility group nucleosomal binding domain 3	NM_001201363|HMGN3|9324|high mobility group nucleosomal binding domain 3	NM_004242|HMGN3|9324|high mobility group nucleosomal binding domain 3	NM_138730|HMGN3|9324|high mobility group nucleosomal binding domain 3
hg19_v1_chr19_+_1248548_1248600	0.399175	SOX2.p2	NM_177401|MIDN|90007|midnolin
hg19_v1_chr19_+_44100543_44100543	0.398917	SOX2.p2	AK026353|ZNF576|79177|zinc finger protein 576	NM_024327|ZNF576|79177|zinc finger protein 576
hg19_v1_chr6_+_15246299_15246526	0.397813	SOX2.p2	AK292861|JARID2|3720|jumonji, AT rich interactive domain 2	BC046246|JARID2|3720|jumonji, AT rich interactive domain 2	NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2	U57592|JARID2|3720|jumonji, AT rich interactive domain 2
hg19_v1_chr15_-_90347534_90347606	0.397304	SOX2.p2	AK298339|ANPEP|290|alanyl (membrane) aminopeptidase
hg19_v1_chr14_+_85996454_85996493	0.395074	SOX2.p2	AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2
hg19_v1_chr15_+_23810453_23810453	0.394785	SOX2.p2	NM_005664|MKRN3|7681|makorin ring finger protein 3
hg19_v1_chr1_+_1361507_1361525	0.394129	SOX2.p2	NM_001146685|TMEM88B|643965|transmembrane protein 88B
hg19_v1_chr1_+_100111430_100111704	0.393016	SOX2.p2	NM_017734|PALMD|54873|palmdelphin	AF262379|PALMD|54873|palmdelphin	AL390971|PALMD|54873|palmdelphin	AJ312214|PALMD|54873|palmdelphin	BC012570|PALMD|54873|palmdelphin	AK000278|PALMD|54873|palmdelphin	AL390973|PALMD|54873|palmdelphin
hg19_v1_chr6_-_49712055_49712167	0.392534	SOX2.p2	BC069602|CRISP3|10321|cysteine-rich secretory protein 3	X95240|CRISP3|10321|cysteine-rich secretory protein 3	AK223380|CRISP3|10321|cysteine-rich secretory protein 3	X94323|CRISP3|10321|cysteine-rich secretory protein 3	AK303966|CRISP3|10321|cysteine-rich secretory protein 3	AK313387|CRISP3|10321|cysteine-rich secretory protein 3	AK292786|CRISP3|10321|cysteine-rich secretory protein 3	NM_001190986|CRISP3|10321|cysteine-rich secretory protein 3	NM_006061|CRISP3|10321|cysteine-rich secretory protein 3
hg19_v1_chr21_-_40720842_40720937	0.391839	SOX2.p2	BT007337|HMGN1|3150|high mobility group nucleosome binding domain 1	DQ891741|HMGN1|3150|high mobility group nucleosome binding domain 1	DQ894919|HMGN1|3150|high mobility group nucleosome binding domain 1
hg19_v1_chr3_+_49568370_49568448	0.389908	SOX2.p2	AK297802|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)
hg19_v1_chr3_+_122044010_122044139	0.389186	SOX2.p2	NM_005213|CSTA|1475|cystatin A (stefin A)	AK291308|CSTA|1475|cystatin A (stefin A)	BC010379|CSTA|1475|cystatin A (stefin A)	X05978|CSTA|1475|cystatin A (stefin A)	CR456914|CSTA|1475|cystatin A (stefin A)
hg19_v1_chr3_+_186435097_186435330	0.389037	SOX2.p2	NM_000893|KNG1|3827|kininogen 1	NM_001102416|KNG1|3827|kininogen 1	NM_001166451|KNG1|3827|kininogen 1	AK303768|KNG1|3827|kininogen 1	AK298440|KNG1|3827|kininogen 1	AK315230|KNG1|3827|kininogen 1	AK290839|KNG1|3827|kininogen 1	BC060039|KNG1|3827|kininogen 1	K02566|KNG1|3827|kininogen 1	BC026253|KNG1|3827|kininogen 1
hg19_v1_chr4_+_95128994_95129234	0.386503	SOX2.p2	NM_001128429|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	NM_020159|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	BC045534|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	AY008271|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	BC041800|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v1_chr14_-_105261850_105261895	0.38575	SOX2.p2	BC063408|AKT1|207|v-akt murine thymoma viral oncogene homolog 1
hg19_v1_chr5_-_35118223_35118223	0.385343	SOX2.p2	NM_001204314|PRLR|5618|prolactin receptor	NM_001204315|PRLR|5618|prolactin receptor	NM_001204316|PRLR|5618|prolactin receptor	NM_001204317|PRLR|5618|prolactin receptor	NM_001204318|PRLR|5618|prolactin receptor
hg19_v1_chr1_-_17308072_17308080	0.384721	SOX2.p2	AK301655|MFAP2|4237|microfibrillar-associated protein 2	NM_001135247|MFAP2|4237|microfibrillar-associated protein 2	NM_017459|MFAP2|4237|microfibrillar-associated protein 2
hg19_v1_chr7_+_139528951_139529234	0.383388	SOX2.p2	NM_001061|TBXAS1|6916|thromboxane A synthase 1 (platelet)	NM_001166253|TBXAS1|6916|thromboxane A synthase 1 (platelet)	NM_030984|TBXAS1|6916|thromboxane A synthase 1 (platelet)	BC041157|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK296069|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK301164|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK303440|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK301049|TBXAS1|6916|thromboxane A synthase 1 (platelet)	M74055|TBXAS1|6916|thromboxane A synthase 1 (platelet)	S60133|TBXAS1|6916|thromboxane A synthase 1 (platelet)
hg19_v1_chr14_-_92414004_92414045	0.383215	SOX2.p2	AY358898|FBLN5|10516|fibulin 5	NM_006329|FBLN5|10516|fibulin 5
hg19_v1_chr17_+_56065408_56065540	0.381774	SOX2.p2	
hg19_v1_chr7_+_94292737_94292755	0.38057	SOX2.p2	AB049834|PEG10|23089|paternally expressed 10
hg19_v1_chr2_-_180610768_180610768	0.37996	SOX2.p2	AK096822|ZNF385B|151126|zinc finger protein 385B	NM_001113397|ZNF385B|151126|zinc finger protein 385B
hg19_v1_chr7_+_94292816_94292946	0.377063	SOX2.p2	AB028974|PEG10|23089|paternally expressed 10	AF216076|PEG10|23089|paternally expressed 10
hg19_v1_chr4_+_95128750_95128872	0.377002	SOX2.p2	NM_001128430|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	AK027490|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	BC017953|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	AB032948|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v1_chr2_-_99279935_99279935	0.376496	SOX2.p2	AK304393|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A	AK309852|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A	NM_001160154|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg19_v1_chr4_+_156680125_156680283	0.375312	SOX2.p2	NM_000857|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK315944|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK300296|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK315199|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK296680|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK307838|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC026332|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC060835|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC047620|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	X66533|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AF020340|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3
hg19_v1_chr4_-_104020964_104021036	0.374825	SOX2.p2	AK128463|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AF164790|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK023323|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK290160|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK291335|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK300626|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	BC037277|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	BC095414|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AY358841|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	BC001953|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	NM_020139|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2
hg19_v1_chr2_-_26205327_26205367	0.374075	SOX2.p2	BC092406|KIF3C|3797|kinesin family member 3C	AK293738|KIF3C|3797|kinesin family member 3C	AK315324|KIF3C|3797|kinesin family member 3C	BC042486|KIF3C|3797|kinesin family member 3C	BX571741|KIF3C|3797|kinesin family member 3C
hg19_v1_chr3_+_143692166_143692268	0.373441	SOX2.p2	NM_001134470|C3orf58|205428|chromosome 3 open reading frame 58	AK294020|C3orf58|205428|chromosome 3 open reading frame 58
hg19_v1_chr3_-_119379269_119379436	0.372592	SOX2.p2	AF204173|POPDC2|64091|popeye domain containing 2	NM_022135|POPDC2|64091|popeye domain containing 2	AK314819|POPDC2|64091|popeye domain containing 2	BC044929|POPDC2|64091|popeye domain containing 2
hg19_v1_chr3_-_122283423_122283522	0.372169	SOX2.p2	AF307338|PARP9|83666|poly (ADP-ribose) polymerase family, member 9	AF307339|PARP9|83666|poly (ADP-ribose) polymerase family, member 9	NM_001146103|PARP9|83666|poly (ADP-ribose) polymerase family, member 9	NM_031458|PARP9|83666|poly (ADP-ribose) polymerase family, member 9
hg19_v1_chr7_-_14030864_14030873	0.371986	SOX2.p2	NM_001163149|ETV1|2115|ets variant 1	X87175|ETV1|2115|ets variant 1
hg19_v1_chr10_+_49514652_49514920	0.369893	SOX2.p2	AK292523|MAPK8|5599|mitogen-activated protein kinase 8
hg19_v1_chr6_-_79944324_79944392	0.368928	SOX2.p2	L40357|HMGN3|9324|high mobility group nucleosomal binding domain 3	AF401520|HMGN3|9324|high mobility group nucleosomal binding domain 3	AF274949|HMGN3|9324|high mobility group nucleosomal binding domain 3	BC009529|HMGN3|9324|high mobility group nucleosomal binding domain 3
hg19_v1_chr11_+_63706433_63706535	0.368726	SOX2.p2	NM_024771|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	AK023910|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	AK300451|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	AK303557|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	JF263566|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	BC041617|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	BC052298|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)
hg19_v1_chr4_+_2820540_2820540	0.368326	SOX2.p2	AB000462|SH3BP2|6452|SH3-domain binding protein 2	AB000463|SH3BP2|6452|SH3-domain binding protein 2	NM_003023|SH3BP2|6452|SH3-domain binding protein 2
hg19_v1_chr15_-_101791674_101791798	0.367481	SOX2.p2	AB071402|CHSY1|22856|chondroitin sulfate synthase 1
hg19_v1_chr4_-_7941092_7941684	0.367011	SOX2.p2	AK297631|AFAP1|60312|actin filament associated protein 1	AK290807|AFAP1|60312|actin filament associated protein 1	NM_001134647|AFAP1|60312|actin filament associated protein 1	NM_198595|AFAP1|60312|actin filament associated protein 1
hg19_v1_chr6_+_41040891_41040960	0.366827	SOX2.p2	BC039244|NFYA|4800|nuclear transcription factor Y, alpha
hg19_v1_chrX_-_64196268_64196430	0.366523	SOX2.p2	AK022918|ZC4H2|55906|zinc finger, C4H2 domain containing	AK123763|ZC4H2|55906|zinc finger, C4H2 domain containing	AK315485|ZC4H2|55906|zinc finger, C4H2 domain containing	AK222708|ZC4H2|55906|zinc finger, C4H2 domain containing	AK293570|ZC4H2|55906|zinc finger, C4H2 domain containing	AF270491|ZC4H2|55906|zinc finger, C4H2 domain containing	BC004411|ZC4H2|55906|zinc finger, C4H2 domain containing	AB032992|ZC4H2|55906|zinc finger, C4H2 domain containing	NM_001178033|ZC4H2|55906|zinc finger, C4H2 domain containing	NM_018684|ZC4H2|55906|zinc finger, C4H2 domain containing
hg19_v1_chr6_+_50786438_50786632	0.365314	SOX2.p2	NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)
hg19_v1_chr6_-_130536417_130536493	0.362569	SOX2.p2	BC029851|SAMD3|154075|sterile alpha motif domain containing 3	BC119757|SAMD3|154075|sterile alpha motif domain containing 3	BC119758|SAMD3|154075|sterile alpha motif domain containing 3	BC127653|SAMD3|154075|sterile alpha motif domain containing 3	BC127654|SAMD3|154075|sterile alpha motif domain containing 3	NM_152552|SAMD3|154075|sterile alpha motif domain containing 3
hg19_v1_chrX_-_112066353_112066353	0.362217	SOX2.p2	AY987378|AMOT|154796|angiomotin	NM_001113490|AMOT|154796|angiomotin
hg19_v1_chr9_+_77112251_77112298	0.361801	SOX2.p2	NM_006914|RORB|6096|RAR-related orphan receptor B	BC051830|RORB|6096|RAR-related orphan receptor B	Y08639|RORB|6096|RAR-related orphan receptor B
hg19_v1_chr5_-_138210992_138211035	0.361312	SOX2.p2	AK309790|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AB007876|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	BC028172|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AK291064|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AK297332|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg19_v1_chr5_+_140787769_140787769	0.36056	SOX2.p2	AF152335|PCDHGB6|56100|protocadherin gamma subfamily B, 6	AF152522|PCDHGB6|56100|protocadherin gamma subfamily B, 6	NM_018926|PCDHGB6|56100|protocadherin gamma subfamily B, 6	NM_032100|PCDHGB6|56100|protocadherin gamma subfamily B, 6
hg19_v1_chr2_+_120517206_120517594	0.360259	SOX2.p2	M68941|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)	NM_002830|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)	AK314836|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)	BC010674|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
hg19_v1_chr16_+_8807426_8807470	0.360203	SOX2.p2	AK293983|ABAT|18|4-aminobutyrate aminotransferase
hg19_v1_chr4_-_155412411_155412554	0.359481	SOX2.p2	AY354498|DCHS2|54798|dachsous 2 (Drosophila)	BC140919|DCHS2|54798|dachsous 2 (Drosophila)
hg19_v1_chr3_-_14988939_14988974	0.358073	SOX2.p2	BC014104|LOC100505641|100505641|uncharacterized LOC100505641	BC063441|LOC100505641|100505641|uncharacterized LOC100505641	BC039246|LOC100505641|100505641|uncharacterized LOC100505641
hg19_v1_chr5_+_36606667_36606790	0.357816	SOX2.p2	AK312304|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC037310|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK057823|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK293886|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC022285|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC054475|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK295032|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK295754|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	D26443|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	L19158|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg19_v1_chr5_+_31193852_31193902	0.35688	SOX2.p2	BC000019|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)	AK024238|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)
hg19_v1_chr11_-_16424391_16424412	0.356251	SOX2.p2	AL136780|SOX6|55553|SRY (sex determining region Y)-box 6	AK310506|SOX6|55553|SRY (sex determining region Y)-box 6	BC047064|SOX6|55553|SRY (sex determining region Y)-box 6	NM_001145819|SOX6|55553|SRY (sex determining region Y)-box 6	NM_017508|SOX6|55553|SRY (sex determining region Y)-box 6
hg19_v1_chr1_+_151032906_151032912	0.356209	SOX2.p2	BC019253|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg19_v1_chr11_-_119599253_119599512	0.355046	SOX2.p2	X76400|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	AF110314|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	AY029539|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	HQ258297|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	BC113471|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	BC104948|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	AF060231|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	NM_002855|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	NM_203285|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	NM_203286|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)
hg19_v1_chr8_+_98656428_98656491	0.354446	SOX2.p2	BC014977|MTDH|92140|metadherin	AF501310|MTDH|92140|metadherin
hg19_v1_chr8_+_98656494_98656732	0.354185	SOX2.p2	BC022825|MTDH|92140|metadherin	BC009324|MTDH|92140|metadherin	AF411226|MTDH|92140|metadherin	AY082966|MTDH|92140|metadherin	AY974040|MTDH|92140|metadherin
hg19_v1_chr14_+_77228132_77228779	0.353394	SOX2.p2	NM_014909|VASH1|22846|vasohibin 1	AL832588|VASH1|22846|vasohibin 1	BC009031|VASH1|22846|vasohibin 1	AB028959|VASH1|22846|vasohibin 1
hg19_v1_chr4_+_39699663_39699946	0.352839	SOX2.p2	NM_001111112|UBE2K|3093|ubiquitin-conjugating enzyme E2K	NM_001111113|UBE2K|3093|ubiquitin-conjugating enzyme E2K	NM_005339|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AK295846|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AK315524|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AK093533|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AK291454|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AK307130|UBE2K|3093|ubiquitin-conjugating enzyme E2K	BC022804|UBE2K|3093|ubiquitin-conjugating enzyme E2K	BC050600|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AB022435|UBE2K|3093|ubiquitin-conjugating enzyme E2K	AB022436|UBE2K|3093|ubiquitin-conjugating enzyme E2K	U58522|UBE2K|3093|ubiquitin-conjugating enzyme E2K	EU446896|UBE2K|3093|ubiquitin-conjugating enzyme E2K
hg19_v1_chr1_+_155853546_155853601	0.352558	SOX2.p2	AK026178|SYT11|23208|synaptotagmin XI
hg19_v1_chr5_+_98104998_98105085	0.352519	SOX2.p2	BC067736|RGMB|285704|RGM domain family, member B	NM_001012761|RGMB|285704|RGM domain family, member B	AK074887|RGMB|285704|RGM domain family, member B
hg19_v1_chr10_-_14646407_14646451	0.352122	SOX2.p2	BC072452|FAM107B|83641|family with sequence similarity 107, member B
hg19_v1_chr7_-_148725500_148725610	0.351731	SOX2.p2	DQ893573|PDIA4|9601|protein disulfide isomerase family A, member 4	DQ894347|PDIA4|9601|protein disulfide isomerase family A, member 4	BC000425|PDIA4|9601|protein disulfide isomerase family A, member 4	BC001928|PDIA4|9601|protein disulfide isomerase family A, member 4	AK290971|PDIA4|9601|protein disulfide isomerase family A, member 4
hg19_v1_chr3_+_151531860_151531949	0.350946	SOX2.p2	NM_001086|AADAC|13|arylacetamide deacetylase (esterase)	L32179|AADAC|13|arylacetamide deacetylase (esterase)	BC020706|AADAC|13|arylacetamide deacetylase (esterase)	AK290628|AADAC|13|arylacetamide deacetylase (esterase)	BC032309|AADAC|13|arylacetamide deacetylase (esterase)
hg19_v1_chr13_+_100633977_100634063	0.350653	SOX2.p2	NM_007129|ZIC2|7546|Zic family member 2
hg19_v1_chr2_+_166428845_166428854	0.350563	SOX2.p2	NM_024969|CSRNP3|80034|cysteine-serine-rich nuclear protein 3	AK056655|CSRNP3|80034|cysteine-serine-rich nuclear protein 3
hg19_v1_chr6_+_41040687_41040712	0.350422	SOX2.p2	NM_002505|NFYA|4800|nuclear transcription factor Y, alpha	NM_021705|NFYA|4800|nuclear transcription factor Y, alpha
hg19_v1_chr5_-_111093251_111093465	0.349966	SOX2.p2	NM_001142479|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142480|C5orf13|9315|chromosome 5 open reading frame 13	BC011050|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142478|C5orf13|9315|chromosome 5 open reading frame 13
hg19_v1_chr1_+_244214552_244214560	0.349388	SOX2.p2	NM_205768|ZNF238|10472|zinc finger protein 238
hg19_v1_chr14_+_69726868_69727007	0.349255	SOX2.p2	AK299588|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AB032956|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	BC122545|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	BC098578|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AK315848|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AK289745|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	BC036812|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AB078143|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AJ505951|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1
hg19_v1_chr10_-_13390189_13390345	0.348167	SOX2.p2	U34044|SEPHS1|22929|selenophosphate synthetase 1	BC063816|SEPHS1|22929|selenophosphate synthetase 1	GU954545|SEPHS1|22929|selenophosphate synthetase 1	GU954546|SEPHS1|22929|selenophosphate synthetase 1	GU954547|SEPHS1|22929|selenophosphate synthetase 1	GU954548|SEPHS1|22929|selenophosphate synthetase 1	GU954549|SEPHS1|22929|selenophosphate synthetase 1	NM_001195602|SEPHS1|22929|selenophosphate synthetase 1	NM_001195604|SEPHS1|22929|selenophosphate synthetase 1	NM_012247|SEPHS1|22929|selenophosphate synthetase 1
hg19_v1_chrX_+_12994286_12994400	0.346107	SOX2.p2	BC104464|TMSB4X|7114|thymosin beta 4, X-linked	BC104465|TMSB4X|7114|thymosin beta 4, X-linked	BT007090|TMSB4X|7114|thymosin beta 4, X-linked	X02493|TMSB4X|7114|thymosin beta 4, X-linked
hg19_v1_chr22_-_33402648_33402805	0.344843	SOX2.p2	CU013189|SYN3|8224|synapsin III	CU013477|SYN3|8224|synapsin III	HQ258468|SYN3|8224|synapsin III	BC075065|SYN3|8224|synapsin III	BC075066|SYN3|8224|synapsin III	BC117460|SYN3|8224|synapsin III	BC143874|SYN3|8224|synapsin III	AF046873|SYN3|8224|synapsin III	CR456589|SYN3|8224|synapsin III	NM_003490|SYN3|8224|synapsin III	NM_133633|SYN3|8224|synapsin III
hg19_v1_chr15_-_101792125_101792145	0.343095	SOX2.p2	BC046247|CHSY1|22856|chondroitin sulfate synthase 1	AY358529|CHSY1|22856|chondroitin sulfate synthase 1	AB023207|CHSY1|22856|chondroitin sulfate synthase 1	NM_014918|CHSY1|22856|chondroitin sulfate synthase 1
hg19_v1_chr5_-_111093792_111093914	0.342467	SOX2.p2	NM_001142477|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142476|C5orf13|9315|chromosome 5 open reading frame 13
hg19_v1_chr1_+_66458389_66458417	0.342464	SOX2.p2	AB209081|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	NM_001037340|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	AK290006|PDE4B|5142|phosphodiesterase 4B, cAMP-specific
hg19_v1_chr15_+_52311408_52311431	0.342352	SOX2.p2	NM_002748|MAPK6|5597|mitogen-activated protein kinase 6
hg19_v1_chr20_+_44462395_44462558	0.341419	SOX2.p2	AK293443|SNX21|90203|sorting nexin family member 21	BC012904|SNX21|90203|sorting nexin family member 21	NM_001042632|SNX21|90203|sorting nexin family member 21	NM_001042633|SNX21|90203|sorting nexin family member 21	NM_033421|SNX21|90203|sorting nexin family member 21	NM_152897|SNX21|90203|sorting nexin family member 21	AF523834|SNX21|90203|sorting nexin family member 21	AL591562|SNX21|90203|sorting nexin family member 21	BC019823|SNX21|90203|sorting nexin family member 21	AF395845|SNX21|90203|sorting nexin family member 21
hg19_v1_chr7_-_148725764_148725781	0.34104	SOX2.p2	NM_004911|PDIA4|9601|protein disulfide isomerase family A, member 4
hg19_v1_chr9_-_86584079_86584113	0.340005	SOX2.p2	BC013220|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K
hg19_v1_chr3_-_168864066_168864092	0.339704	SOX2.p2	BC130520|MECOM|2122|MDS1 and EVI1 complex locus	BC143951|MECOM|2122|MDS1 and EVI1 complex locus	BC143952|MECOM|2122|MDS1 and EVI1 complex locus	AF164154|MECOM|2122|MDS1 and EVI1 complex locus	AF164155|MECOM|2122|MDS1 and EVI1 complex locus	AF164156|MECOM|2122|MDS1 and EVI1 complex locus	AF164157|MECOM|2122|MDS1 and EVI1 complex locus	NM_001105077|MECOM|2122|MDS1 and EVI1 complex locus	NM_001163999|MECOM|2122|MDS1 and EVI1 complex locus	NM_005241|MECOM|2122|MDS1 and EVI1 complex locus	X54989|MECOM|2122|MDS1 and EVI1 complex locus
hg19_v1_chr10_-_72142344_72142385	0.337684	SOX2.p2	AK094734|LRRC20|55222|leucine rich repeat containing 20	AK001613|LRRC20|55222|leucine rich repeat containing 20	AK001706|LRRC20|55222|leucine rich repeat containing 20	NM_018205|LRRC20|55222|leucine rich repeat containing 20	NM_018239|LRRC20|55222|leucine rich repeat containing 20
hg19_v1_chr14_-_60097223_60097308	0.337305	SOX2.p2	CR457030|RTN1|6252|reticulon 1	L10335|RTN1|6252|reticulon 1
hg19_v1_chr1_-_26233367_26233367	0.335404	SOX2.p2	NM_203399|STMN1|3925|stathmin 1
hg19_v1_chr4_-_70626429_70626429	0.332036	SOX2.p2	BC010895|SULT1B1|27284|sulfotransferase family, cytosolic, 1B, member 1	NM_014465|SULT1B1|27284|sulfotransferase family, cytosolic, 1B, member 1
hg19_v1_chr2_-_99347430_99347562	0.33191	SOX2.p2	AK314024|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg19_v1_chr5_+_140213968_140213968	0.33176	SOX2.p2	AF152315|PCDHA7|56141|protocadherin alpha 7	AF152485|PCDHA7|56141|protocadherin alpha 7	NM_018910|PCDHA7|56141|protocadherin alpha 7	NM_031852|PCDHA7|56141|protocadherin alpha 7
hg19_v1_chr1_-_190446701_190446770	0.330713	SOX2.p2	AK123024|FAM5C|339479|family with sequence similarity 5, member C	AB111893|FAM5C|339479|family with sequence similarity 5, member C	NM_199051|FAM5C|339479|family with sequence similarity 5, member C
hg19_v1_chr6_+_27777713_27777851	0.329812	SOX2.p2	BC007518|HIST1H3H|8357|histone cluster 1, H3h	AK311991|HIST1H3H|8357|histone cluster 1, H3h	NM_003536|HIST1H3H|8357|histone cluster 1, H3h	EU446975|HIST1H3H|8357|histone cluster 1, H3h	BC096128|HIST1H3H|8357|histone cluster 1, H3h	BC096129|HIST1H3H|8357|histone cluster 1, H3h	BC096130|HIST1H3H|8357|histone cluster 1, H3h	BC143046|HIST1H3H|8357|histone cluster 1, H3h	BC148243|HIST1H3H|8357|histone cluster 1, H3h	BC148250|HIST1H3H|8357|histone cluster 1, H3h
hg19_v1_chr2_-_99347588_99347638	0.328868	SOX2.p2	NM_012214|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg19_v1_chr11_-_111782447_111782539	0.327617	SOX2.p2	BT006770|CRYAB|1410|crystallin, alpha B	FJ876064|CRYAB|1410|crystallin, alpha B	AM392549|CRYAB|1410|crystallin, alpha B	AM393027|CRYAB|1410|crystallin, alpha B	DQ892517|CRYAB|1410|crystallin, alpha B	DQ895729|CRYAB|1410|crystallin, alpha B	AF007162|CRYAB|1410|crystallin, alpha B	NM_001885|CRYAB|1410|crystallin, alpha B	S45630|CRYAB|1410|crystallin, alpha B	AK314029|CRYAB|1410|crystallin, alpha B	BC007008|CRYAB|1410|crystallin, alpha B	AK295498|CRYAB|1410|crystallin, alpha B
hg19_v1_chr5_+_102465256_102465293	0.327456	SOX2.p2	BC024591|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2	NM_015216|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2
hg19_v1_chr17_-_1083008_1083130	0.327302	SOX2.p2	AK302682|ABR|29|active BCR-related gene	NM_021962|ABR|29|active BCR-related gene	U01147|ABR|29|active BCR-related gene
hg19_v1_chrX_-_76937157_76937201	0.324166	SOX2.p2	L33812|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked
hg19_v1_chr8_+_21777165_21777214	0.323731	SOX2.p2	NM_015024|XPO7|23039|exportin 7	BC030785|XPO7|23039|exportin 7
hg19_v1_chr1_-_41487386_41487426	0.323603	SOX2.p2	BC022037|SLFNL1|200172|schlafen-like 1	AK292296|SLFNL1|200172|schlafen-like 1	BC037879|SLFNL1|200172|schlafen-like 1	NM_001168247|SLFNL1|200172|schlafen-like 1	AK097609|SLFNL1|200172|schlafen-like 1	NM_144990|SLFNL1|200172|schlafen-like 1
hg19_v1_chr1_+_66797775_66797932	0.323568	SOX2.p2	NM_001037339|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	M97515|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	L12686|PDE4B|5142|phosphodiesterase 4B, cAMP-specific
hg19_v1_chr2_+_183943511_183943787	0.321008	SOX2.p2	AF486808|DUSP19|142679|dual specificity phosphatase 19	BC093958|DUSP19|142679|dual specificity phosphatase 19	BC112005|DUSP19|142679|dual specificity phosphatase 19	BC143337|DUSP19|142679|dual specificity phosphatase 19	AB038770|DUSP19|142679|dual specificity phosphatase 19	DQ891206|DUSP19|142679|dual specificity phosphatase 19	DQ894389|DUSP19|142679|dual specificity phosphatase 19	BX647818|DUSP19|142679|dual specificity phosphatase 19
hg19_v1_chr4_+_88896838_88896866	0.320943	SOX2.p2	BX648003|SPP1|6696|secreted phosphoprotein 1	J04765|SPP1|6696|secreted phosphoprotein 1	AK057738|SPP1|6696|secreted phosphoprotein 1	AK075463|SPP1|6696|secreted phosphoprotein 1	AK290090|SPP1|6696|secreted phosphoprotein 1	AK296035|SPP1|6696|secreted phosphoprotein 1	BC007016|SPP1|6696|secreted phosphoprotein 1	BC017387|SPP1|6696|secreted phosphoprotein 1	BC022844|SPP1|6696|secreted phosphoprotein 1	AK295491|SPP1|6696|secreted phosphoprotein 1
hg19_v1_chr16_-_20702577_20702577	0.32091	SOX2.p2	AB059429|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1	BC125177|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1	BC125178|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1	NM_052956|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1
hg19_v1_chr6_+_43211221_43211236	0.320567	SOX2.p2	NM_032538|TTBK1|84630|tau tubulin kinase 1
hg19_v1_chr4_-_47983430_47983549	0.320119	SOX2.p2	M84741|CNGA1|1259|cyclic nucleotide gated channel alpha 1	NM_001142564|CNGA1|1259|cyclic nucleotide gated channel alpha 1	S42457|CNGA1|1259|cyclic nucleotide gated channel alpha 1
hg19_v1_chrX_-_15288588_15288588	0.319489	SOX2.p2	AK292270|ASB9|140462|ankyrin repeat and SOCS box containing 9	NM_001168531|ASB9|140462|ankyrin repeat and SOCS box containing 9
hg19_v1_chr22_+_50609159_50609189	0.319483	SOX2.p2	AK299910|PANX2|56666|pannexin 2	NM_001160300|PANX2|56666|pannexin 2	NM_052839|PANX2|56666|pannexin 2	AK096019|PANX2|56666|pannexin 2	AF398510|PANX2|56666|pannexin 2	AF398511|PANX2|56666|pannexin 2	BC101023|PANX2|56666|pannexin 2
hg19_v1_chrX_-_117107700_117107759	0.319307	SOX2.p2	AK125356|KLHL13|90293|kelch-like 13 (Drosophila)	NM_033495|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168300|KLHL13|90293|kelch-like 13 (Drosophila)
hg19_v1_chr2_+_208394823_208394828	0.317782	SOX2.p2	AY347527|CREB1|1385|cAMP responsive element binding protein 1	AK315226|CREB1|1385|cAMP responsive element binding protein 1
hg19_v1_chr16_+_2083264_2083296	0.315624	SOX2.p2	NM_001252073|SLC9A3R2|9351|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2	NM_001252075|SLC9A3R2|9351|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2	NM_001252076|SLC9A3R2|9351|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2
hg19_v1_chr4_-_155412867_155412947	0.315044	SOX2.p2	AK127704|DCHS2|54798|dachsous 2 (Drosophila)	NM_001142552|DCHS2|54798|dachsous 2 (Drosophila)	NM_001142553|DCHS2|54798|dachsous 2 (Drosophila)
hg19_v1_chr6_+_131894343_131894422	0.314343	SOX2.p2	NM_000045|ARG1|383|arginase, liver	NM_001244438|ARG1|383|arginase, liver	AY074488|ARG1|383|arginase, liver	BC005321|ARG1|383|arginase, liver	M14502|ARG1|383|arginase, liver	BC020653|ARG1|383|arginase, liver	DQ892039|ARG1|383|arginase, liver	DQ895230|ARG1|383|arginase, liver	BT006741|ARG1|383|arginase, liver
hg19_v1_chr6_-_27440459_27440944	0.314086	SOX2.p2	BC022992|ZNF184|7738|zinc finger protein 184	AK123011|ZNF184|7738|zinc finger protein 184	AK312804|ZNF184|7738|zinc finger protein 184	NM_007149|ZNF184|7738|zinc finger protein 184
hg19_v1_chr3_-_66024508_66024518	0.313943	SOX2.p2	BC062367|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_001033057|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_004742|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_015520|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1
hg19_v1_chr6_-_52668599_52668764	0.313804	SOX2.p2	BC053578|GSTA1|2938|glutathione S-transferase alpha 1	BC110891|GSTA1|2938|glutathione S-transferase alpha 1	M15872|GSTA1|2938|glutathione S-transferase alpha 1	AK293371|GSTA1|2938|glutathione S-transferase alpha 1	M14777|GSTA1|2938|glutathione S-transferase alpha 1	M21758|GSTA1|2938|glutathione S-transferase alpha 1	M25627|GSTA1|2938|glutathione S-transferase alpha 1	NM_145740|GSTA1|2938|glutathione S-transferase alpha 1	AK310324|GSTA1|2938|glutathione S-transferase alpha 1
hg19_v1_chr9_-_99064385_99064433	0.313445	SOX2.p2	BT019371|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	CR541894|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	DQ891812|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	DQ894995|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	BC034281|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	NM_000197|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3	U05659|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3
hg19_v1_chr1_-_117210301_117210466	0.313345	SOX2.p2	NM_001007237|IGSF3|3321|immunoglobulin superfamily, member 3	NM_001542|IGSF3|3321|immunoglobulin superfamily, member 3	BC110651|IGSF3|3321|immunoglobulin superfamily, member 3
hg19_v1_chr3_-_112359962_112359992	0.312189	SOX2.p2	AY548106|CCDC80|151887|coiled-coil domain containing 80	AY548107|CCDC80|151887|coiled-coil domain containing 80	BC110842|CCDC80|151887|coiled-coil domain containing 80	AY526612|CCDC80|151887|coiled-coil domain containing 80	NM_199511|CCDC80|151887|coiled-coil domain containing 80	NM_199512|CCDC80|151887|coiled-coil domain containing 80	AK304561|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr12_-_70083055_70083056	0.311892	SOX2.p2	NM_152439|BEST3|144453|bestrophin 3	BC028087|BEST3|144453|bestrophin 3
hg19_v1_chr9_+_4839763_4839773	0.311832	SOX2.p2	EF553527|RCL1|10171|RNA terminal phosphate cyclase-like 1
hg19_v1_chr1_+_50574601_50574768	0.311558	SOX2.p2	AY033997|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	BC036071|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	AY033998|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	M62843|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg19_v1_chr6_+_39760138_39760141	0.311408	SOX2.p2	
hg19_v1_chr10_-_113943467_113943544	0.311215	SOX2.p2	AL832464|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	BC030783|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	BX647451|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	AL833061|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	AL833093|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	NM_001244949|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	NM_020918|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial
hg19_v1_chr22_+_38382170_38382175	0.311178	SOX2.p2	AK098727|LOC100131530|100131530|uncharacterized LOC100131530
hg19_v1_chr10_+_102106771_102106912	0.310461	SOX2.p2	NM_005063|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)	AB032261|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)	BC062303|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)
hg19_v1_chrX_+_134124967_134124967	0.310109	SOX2.p2	BC008642|CXorf69|644538|chromosome X open reading frame 69	NM_001163438|CXorf69|644538|chromosome X open reading frame 69
hg19_v1_chr2_-_26205437_26205444	0.309917	SOX2.p2	NM_002254|KIF3C|3797|kinesin family member 3C
hg19_v1_chr17_-_76921076_76921155	0.309542	SOX2.p2	X54533|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg19_v1_chr20_+_2944918_2944935	0.309243	SOX2.p2	DQ891155|PTPRA|5786|protein tyrosine phosphatase, receptor type, A	DQ894334|PTPRA|5786|protein tyrosine phosphatase, receptor type, A
hg19_v1_chrX_-_63425484_63425669	0.309021	SOX2.p2	EF186024|FAM123B|139285|family with sequence similarity 123B	AK097146|FAM123B|139285|family with sequence similarity 123B	NM_152424|FAM123B|139285|family with sequence similarity 123B
hg19_v1_chr5_+_132209354_132209359	0.308982	SOX2.p2	AJ306405|LEAP2|116842|liver expressed antimicrobial peptide 2	AY052782|LEAP2|116842|liver expressed antimicrobial peptide 2	NM_052971|LEAP2|116842|liver expressed antimicrobial peptide 2	BC070199|LEAP2|116842|liver expressed antimicrobial peptide 2
hg19_v1_chr5_-_76382905_76383181	0.308864	SOX2.p2	BC007239|ZBED3|84327|zinc finger, BED-type containing 3	NM_032367|ZBED3|84327|zinc finger, BED-type containing 3	AK223624|ZBED3|84327|zinc finger, BED-type containing 3
hg19_v1_chr1_+_151032866_151032873	0.30853	SOX2.p2	BC009624|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg19_v1_chr11_+_20049128_20049136	0.308422	SOX2.p2	AK307574|NAV2|89797|neuron navigator 2
hg19_v1_chr14_+_100259445_100259963	0.307865	SOX2.p2	AK126980|EML1|2009|echinoderm microtubule associated protein like 1	BX247979|EML1|2009|echinoderm microtubule associated protein like 1	NM_001008707|EML1|2009|echinoderm microtubule associated protein like 1	NM_004434|EML1|2009|echinoderm microtubule associated protein like 1	BC033043|EML1|2009|echinoderm microtubule associated protein like 1	U97018|EML1|2009|echinoderm microtubule associated protein like 1	BC032541|EML1|2009|echinoderm microtubule associated protein like 1	DQ891556|EML1|2009|echinoderm microtubule associated protein like 1	DQ894743|EML1|2009|echinoderm microtubule associated protein like 1
hg19_v1_chr11_-_73693883_73693888	0.307854	SOX2.p2	AK222540|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)	AK222557|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)	NM_003355|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)
hg19_v1_chr10_-_91102430_91102481	0.30761	SOX2.p2	AK091558|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase
hg19_v1_chr1_-_67519698_67519855	0.307356	SOX2.p2	BC093786|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	BC112031|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	AB044343|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	D87449|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1
hg19_v1_chrX_-_73512376_73512434	0.306338	SOX2.p2	AK057701|FTX|100302692|FTX transcript, XIST regulator (non-protein coding)
hg19_v1_chr5_+_140767402_140767451	0.306255	SOX2.p2	BC113607|PCDHGB4|8641|protocadherin gamma subfamily B, 4	BC112088|PCDHGB4|8641|protocadherin gamma subfamily B, 4	AF152333|PCDHGB4|8641|protocadherin gamma subfamily B, 4	AF152520|PCDHGB4|8641|protocadherin gamma subfamily B, 4	NM_003736|PCDHGB4|8641|protocadherin gamma subfamily B, 4	NM_032098|PCDHGB4|8641|protocadherin gamma subfamily B, 4
hg19_v1_chr8_+_21777216_21777281	0.305991	SOX2.p2	AK291472|XPO7|23039|exportin 7	AB018288|XPO7|23039|exportin 7	AF064729|XPO7|23039|exportin 7
hg19_v1_chr1_+_90460650_90460783	0.305835	SOX2.p2	NM_182975|ZNF326|284695|zinc finger protein 326	NM_182976|ZNF326|284695|zinc finger protein 326	BC052645|ZNF326|284695|zinc finger protein 326	BC061521|ZNF326|284695|zinc finger protein 326	BC038454|ZNF326|284695|zinc finger protein 326	BC090866|ZNF326|284695|zinc finger protein 326	AK000410|ZNF326|284695|zinc finger protein 326	BC053888|ZNF326|284695|zinc finger protein 326	BC014899|ZNF326|284695|zinc finger protein 326	BC070341|ZNF326|284695|zinc finger protein 326	BC013102|ZNF326|284695|zinc finger protein 326	AK303707|ZNF326|284695|zinc finger protein 326	AK297073|ZNF326|284695|zinc finger protein 326
hg19_v1_chr10_-_21814610_21814610	0.305386	SOX2.p2	AK131456|C10orf140|387640|chromosome 10 open reading frame 140	NM_207371|C10orf140|387640|chromosome 10 open reading frame 140
hg19_v1_chr4_+_72102249_72102324	0.30384	SOX2.p2	AF069510|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AB470072|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF053753|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF053754|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF310248|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	EF531618|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4
hg19_v1_chr2_+_66662516_66662531	0.303747	SOX2.p2	AL832770|MEIS1|4211|Meis homeobox 1	BC043503|MEIS1|4211|Meis homeobox 1	NM_002398|MEIS1|4211|Meis homeobox 1
hg19_v1_chr16_-_51184507_51184507	0.303345	SOX2.p2	AK307835|SALL1|6299|sal-like 1 (Drosophila)	NM_001127892|SALL1|6299|sal-like 1 (Drosophila)
hg19_v1_chr8_+_40010986_40011051	0.303021	SOX2.p2	BC021672|C8orf4|56892|chromosome 8 open reading frame 4	NM_020130|C8orf4|56892|chromosome 8 open reading frame 4	BC020623|C8orf4|56892|chromosome 8 open reading frame 4	AF268037|C8orf4|56892|chromosome 8 open reading frame 4	AK026240|C8orf4|56892|chromosome 8 open reading frame 4	EU832636|C8orf4|56892|chromosome 8 open reading frame 4	EU832712|C8orf4|56892|chromosome 8 open reading frame 4
hg19_v1_chr5_+_67588395_67588510	0.302906	SOX2.p2	AK094785|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	NM_001242466|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	AK294919|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg19_v1_chr5_+_31193761_31193832	0.302769	SOX2.p2	NM_004932|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)	AK291290|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)
hg19_v1_chr13_+_52598678_52598826	0.30217	SOX2.p2	BC073862|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	D87455|UTP14C|9724|UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)	NM_021645|UTP14C|9724|UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)
hg19_v1_chr10_+_72972268_72972493	0.301995	SOX2.p2	AK128132|UNC5B|219699|unc-5 homolog B (C. elegans)	NM_001244889|UNC5B|219699|unc-5 homolog B (C. elegans)	NM_170744|UNC5B|219699|unc-5 homolog B (C. elegans)	AY358351|UNC5B|219699|unc-5 homolog B (C. elegans)	AB096256|UNC5B|219699|unc-5 homolog B (C. elegans)
hg19_v1_chr2_+_27799388_27799392	0.301343	SOX2.p2	CR749335|C2orf16|84226|chromosome 2 open reading frame 16	NM_032266|C2orf16|84226|chromosome 2 open reading frame 16	BC140828|C2orf16|84226|chromosome 2 open reading frame 16
hg19_v1_chr8_+_42195972_42196142	0.300765	SOX2.p2	NM_002690|POLB|5423|polymerase (DNA directed), beta	AK223537|POLB|5423|polymerase (DNA directed), beta	BC100288|POLB|5423|polymerase (DNA directed), beta	AK294025|POLB|5423|polymerase (DNA directed), beta	AK314976|POLB|5423|polymerase (DNA directed), beta	D29013|POLB|5423|polymerase (DNA directed), beta	M13140|POLB|5423|polymerase (DNA directed), beta	BC106909|POLB|5423|polymerase (DNA directed), beta	CR536503|POLB|5423|polymerase (DNA directed), beta	CR541802|POLB|5423|polymerase (DNA directed), beta	L11607|POLB|5423|polymerase (DNA directed), beta
hg19_v1_chr16_-_81110803_81110871	0.300445	SOX2.p2	AK057264|C16orf46|123775|chromosome 16 open reading frame 46	AK295411|C16orf46|123775|chromosome 16 open reading frame 46	BC064143|C16orf46|123775|chromosome 16 open reading frame 46	NM_001100873|C16orf46|123775|chromosome 16 open reading frame 46	NM_152337|C16orf46|123775|chromosome 16 open reading frame 46
hg19_v1_chr5_+_95066628_95067109	0.30002	SOX2.p2	BC047884|RHOBTB3|22836|Rho-related BTB domain containing 3	NM_014899|RHOBTB3|22836|Rho-related BTB domain containing 3	BC020231|RHOBTB3|22836|Rho-related BTB domain containing 3	BC013169|RHOBTB3|22836|Rho-related BTB domain containing 3	BC041337|RHOBTB3|22836|Rho-related BTB domain containing 3	AB020685|RHOBTB3|22836|Rho-related BTB domain containing 3	AK290034|RHOBTB3|22836|Rho-related BTB domain containing 3
hg19_v1_chr18_+_3594056_3594228	0.2999	SOX2.p2	AK093095|FLJ35776|649446|uncharacterized LOC649446	BC137437|FLJ35776|649446|uncharacterized LOC649446
hg19_v1_chr2_+_191301020_191301120	0.299863	SOX2.p2	AK098085|MFSD6|54842|major facilitator superfamily domain containing 6
hg19_v1_chr15_+_52311432_52311436	0.29784	SOX2.p2	CR749401|MAPK6|5597|mitogen-activated protein kinase 6
hg19_v1_chr3_+_127347966_127348098	0.297453	SOX2.p2	BC019330|PODXL2|50512|podocalyxin-like 2	AY359096|PODXL2|50512|podocalyxin-like 2	NM_015720|PODXL2|50512|podocalyxin-like 2	BC052585|PODXL2|50512|podocalyxin-like 2	AF219137|PODXL2|50512|podocalyxin-like 2
hg19_v1_chr16_+_21611132_21611177	0.297325	SOX2.p2	AF151839|METTL9|51108|methyltransferase like 9
hg19_v1_chr22_-_39052306_39052420	0.296472	SOX2.p2	AK301819|LOC646851|646851|putative uncharacterized protein LOC388900
hg19_v1_chr1_+_166808680_166808705	0.29645	SOX2.p2	AK293946|POGK|57645|pogo transposable element with KRAB domain	AK299537|POGK|57645|pogo transposable element with KRAB domain
hg19_v1_chr20_-_43024303_43024345	0.296438	SOX2.p2	
hg19_v1_chr6_+_121756744_121756906	0.296155	SOX2.p2	NM_000165|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK312324|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK297764|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK223289|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK294670|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK309377|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK295460|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK297761|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK309490|GJA1|2697|gap junction protein, alpha 1, 43kDa	M65188|GJA1|2697|gap junction protein, alpha 1, 43kDa	X52947|GJA1|2697|gap junction protein, alpha 1, 43kDa	BC026329|GJA1|2697|gap junction protein, alpha 1, 43kDa
hg19_v1_chr2_+_158114109_158114477	0.295496	SOX2.p2	BC142676|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	BC142703|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	AY277591|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	NM_014568|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	AK292154|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	BC144211|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)
hg19_v1_chr1_+_36348816_36349022	0.293601	SOX2.p2	AK314148|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1
hg19_v1_chr3_+_123813527_123813684	0.292353	SOX2.p2	AK314126|KALRN|8997|kalirin, RhoGEF kinase	AK311154|KALRN|8997|kalirin, RhoGEF kinase	NM_001024660|KALRN|8997|kalirin, RhoGEF kinase	NM_003947|KALRN|8997|kalirin, RhoGEF kinase	AK311581|KALRN|8997|kalirin, RhoGEF kinase	U94190|KALRN|8997|kalirin, RhoGEF kinase	BC037924|KALRN|8997|kalirin, RhoGEF kinase
hg19_v1_chrX_+_106143393_106143393	0.292302	SOX2.p2	AF177340|CLDN2|9075|claudin 2	NM_001171092|CLDN2|9075|claudin 2
hg19_v1_chr5_+_140529619_140529838	0.291795	SOX2.p2	AK299661|PCDHB6|56130|protocadherin beta 6	AK313482|PCDHB6|56130|protocadherin beta 6	AF152499|PCDHB6|56130|protocadherin beta 6	AF217752|PCDHB6|56130|protocadherin beta 6	NM_018939|PCDHB6|56130|protocadherin beta 6
hg19_v1_chr17_-_26879645_26879659	0.291103	SOX2.p2	NM_005148|UNC119|9094|unc-119 homolog (C. elegans)	NM_054035|UNC119|9094|unc-119 homolog (C. elegans)	AB593014|UNC119|9094|unc-119 homolog (C. elegans)
hg19_v1_chr1_+_151032880_151032893	0.290845	SOX2.p2	AK057755|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC007079|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC008445|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg19_v1_chr11_+_61248584_61248652	0.290552	SOX2.p2	NM_001170753|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32	NM_145017|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32	AK057333|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32	BC043246|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32	JF442033|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32
hg19_v1_chr2_+_166326156_166326212	0.290324	SOX2.p2	AK126129|CSRNP3|80034|cysteine-serine-rich nuclear protein 3	NM_001172173|CSRNP3|80034|cysteine-serine-rich nuclear protein 3
hg19_v1_chr12_+_124773709_124773709	0.290282	SOX2.p2	AK126577|FAM101A|144347|family with sequence similarity 101, member A	NM_181709|FAM101A|144347|family with sequence similarity 101, member A
hg19_v1_chr10_-_91011586_91011659	0.29028	SOX2.p2	BC012287|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase	X76488|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase	NM_000235|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase	NM_001127605|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase
hg19_v1_chr1_+_57320442_57320574	0.290171	SOX2.p2	NM_000562|C8A|731|complement component 8, alpha polypeptide	AK309596|C8A|731|complement component 8, alpha polypeptide	BC020702|C8A|731|complement component 8, alpha polypeptide	BC132911|C8A|731|complement component 8, alpha polypeptide	BC132913|C8A|731|complement component 8, alpha polypeptide	HQ258328|C8A|731|complement component 8, alpha polypeptide
hg19_v1_chr4_+_166131170_166131187	0.290056	SOX2.p2	NM_001161521|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	NM_001161522|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	AK294103|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	BX647776|KLHL2|11275|kelch-like 2, Mayven (Drosophila)
hg19_v1_chr8_-_125580745_125580777	0.289474	SOX2.p2	AF116674|MTSS1|9788|metastasis suppressor 1
hg19_v1_chr5_+_40909558_40909606	0.28922	SOX2.p2	AK290349|C7|730|complement component 7	Y11720|C7|730|complement component 7	NM_000587|C7|730|complement component 7	BC065305|C7|730|complement component 7	BC041807|C7|730|complement component 7
hg19_v1_chr10_-_14816895_14816895	0.288749	SOX2.p2	AK127413|FAM107B|83641|family with sequence similarity 107, member B	NM_031453|FAM107B|83641|family with sequence similarity 107, member B
hg19_v1_chr10_-_61122219_61122351	0.288705	SOX2.p2	DQ894404|FAM13C|220965|family with sequence similarity 13, member C	EU176262|FAM13C|220965|family with sequence similarity 13, member C	AK294805|FAM13C|220965|family with sequence similarity 13, member C	AK289796|FAM13C|220965|family with sequence similarity 13, member C	BC036453|FAM13C|220965|family with sequence similarity 13, member C	AK316542|FAM13C|220965|family with sequence similarity 13, member C	BC064431|FAM13C|220965|family with sequence similarity 13, member C	NM_001001971|FAM13C|220965|family with sequence similarity 13, member C	NM_001166698|FAM13C|220965|family with sequence similarity 13, member C	NM_198215|FAM13C|220965|family with sequence similarity 13, member C
hg19_v1_chr17_-_7297826_7297888	0.288246	SOX2.p2	AK124006|PLSCR3|57048|phospholipid scramblase 3	AF289602|PLSCR3|57048|phospholipid scramblase 3	BC028080|PLSCR3|57048|phospholipid scramblase 3	AK098229|PLSCR3|57048|phospholipid scramblase 3	AK075188|PLSCR3|57048|phospholipid scramblase 3	AK314643|PLSCR3|57048|phospholipid scramblase 3	BC093026|PLSCR3|57048|phospholipid scramblase 3	AF159442|PLSCR3|57048|phospholipid scramblase 3
hg19_v1_chr7_-_14031049_14031049	0.288107	SOX2.p2	NM_001163148|ETV1|2115|ets variant 1
hg19_v1_chr1_+_155036201_155036299	0.287879	SOX2.p2	NM_005227|EFNA4|1945|ephrin-A4	NM_182689|EFNA4|1945|ephrin-A4	NM_182690|EFNA4|1945|ephrin-A4	BC107483|EFNA4|1945|ephrin-A4	AJ006352|EFNA4|1945|ephrin-A4	AJ006353|EFNA4|1945|ephrin-A4	U14188|EFNA4|1945|ephrin-A4	CR533569|EFNA4|1945|ephrin-A4
hg19_v1_chr4_-_40936640_40936716	0.287819	SOX2.p2	BC088372|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2
hg19_v1_chr2_+_74120132_74120143	0.287311	SOX2.p2	AK124338|ACTG2|72|actin, gamma 2, smooth muscle, enteric	AK304523|ACTG2|72|actin, gamma 2, smooth muscle, enteric	AK310215|ACTG2|72|actin, gamma 2, smooth muscle, enteric	AK312955|ACTG2|72|actin, gamma 2, smooth muscle, enteric	BC012617|ACTG2|72|actin, gamma 2, smooth muscle, enteric	X16940|ACTG2|72|actin, gamma 2, smooth muscle, enteric
hg19_v1_chr10_+_6244839_6244913	0.28702	SOX2.p2	NM_004566|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	L77662|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	AK291263|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	BC040482|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	AF056320|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
hg19_v1_chrX_-_24665454_24665465	0.286443	SOX2.p2	AK315323|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_001163265|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_004845|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg19_v1_chr3_+_44690216_44690276	0.285991	SOX2.p2	NM_003420|ZNF35|7584|zinc finger protein 35	AK300581|ZNF35|7584|zinc finger protein 35	AK314821|ZNF35|7584|zinc finger protein 35	BC013597|ZNF35|7584|zinc finger protein 35	BC015892|ZNF35|7584|zinc finger protein 35	X07289|ZNF35|7584|zinc finger protein 35
hg19_v1_chr5_-_147162056_147162132	0.285575	SOX2.p2	BC003189|JAKMIP2|9832|janus kinase and microtubule interacting protein 2	AB011127|JAKMIP2|9832|janus kinase and microtubule interacting protein 2	AK291280|JAKMIP2|9832|janus kinase and microtubule interacting protein 2
hg19_v1_chr3_-_187009469_187009809	0.284009	SOX2.p2	BC106945|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	BC106946|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK291686|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK129893|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK304334|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK300663|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	BX647237|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK291157|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	CR749615|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	BC039724|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	NM_001031849|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	NM_001879|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	NM_139125|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)
hg19_v1_chr1_+_61869699_61869747	0.282896	SOX2.p2	AK024964|NFIA|4774|nuclear factor I/A
hg19_v1_chr1_-_217113007_217113016	0.281972	SOX2.p2	AY388459|ESRRG|2104|estrogen-related receptor gamma	AY388458|ESRRG|2104|estrogen-related receptor gamma	NM_001243512|ESRRG|2104|estrogen-related receptor gamma	NM_001243513|ESRRG|2104|estrogen-related receptor gamma	AY388457|ESRRG|2104|estrogen-related receptor gamma	AY388460|ESRRG|2104|estrogen-related receptor gamma	NM_001243510|ESRRG|2104|estrogen-related receptor gamma	NM_001243511|ESRRG|2104|estrogen-related receptor gamma
hg19_v1_chr18_+_44497512_44497602	0.281823	SOX2.p2	AK309134|KATNAL2|83473|katanin p60 subunit A-like 2
hg19_v1_chr1_+_151032683_151032861	0.281482	SOX2.p2	U16954|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC021703|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC032996|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg19_v1_chrX_+_64708614_64708705	0.281424	SOX2.p2	BC140767|ZC3H12B|340554|zinc finger CCCH-type containing 12B	BC171781|ZC3H12B|340554|zinc finger CCCH-type containing 12B	NM_001010888|ZC3H12B|340554|zinc finger CCCH-type containing 12B	BX647241|ZC3H12B|340554|zinc finger CCCH-type containing 12B
hg19_v1_chrX_-_33357725_33357725	0.279453	SOX2.p2	NM_000109|DMD|1756|dystrophin
hg19_v1_chr14_+_96829849_96829887	0.279369	SOX2.p2	AK000796|C14orf129|51527|chromosome 14 open reading frame 129	AK314423|C14orf129|51527|chromosome 14 open reading frame 129	AF151044|C14orf129|51527|chromosome 14 open reading frame 129
hg19_v1_chr2_+_148602050_148602184	0.278012	SOX2.p2	AK301629|ACVR2A|92|activin A receptor, type IIA	M93415|ACVR2A|92|activin A receptor, type IIA
hg19_v1_chr2_-_198175494_198175544	0.276576	SOX2.p2	BC016985|ANKRD44|91526|ankyrin repeat domain 44	AK301209|ANKRD44|91526|ankyrin repeat domain 44	NM_001195144|ANKRD44|91526|ankyrin repeat domain 44	NM_153697|ANKRD44|91526|ankyrin repeat domain 44
hg19_v1_chr1_-_182357757_182357770	0.276088	SOX2.p2	BC127883|GLUL|2752|glutamate-ammonia ligase
hg19_v1_chr20_-_44718564_44718658	0.27605	SOX2.p2	NM_020967|NCOA5|57727|nuclear receptor coactivator 5
hg19_v1_chr5_+_34839268_34839327	0.275681	SOX2.p2	AK058168|TTC23L|153657|tetratricopeptide repeat domain 23-like	NM_144725|TTC23L|153657|tetratricopeptide repeat domain 23-like	AK293829|TTC23L|153657|tetratricopeptide repeat domain 23-like	BC032871|TTC23L|153657|tetratricopeptide repeat domain 23-like	BC057775|TTC23L|153657|tetratricopeptide repeat domain 23-like	AK097766|TTC23L|153657|tetratricopeptide repeat domain 23-like
hg19_v1_chr4_+_88896899_88896928	0.275338	SOX2.p2	AY956318|SPP1|6696|secreted phosphoprotein 1	X13694|SPP1|6696|secreted phosphoprotein 1
hg19_v1_chrX_-_20159757_20159995	0.275302	SOX2.p2	BT007064|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	EU831819|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	EU831896|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	BC000793|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	BC110421|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	AK312320|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	BC067851|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	L18960|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	NM_001412|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked
hg19_v1_chr14_-_102975996_102976070	0.274702	SOX2.p2	AK291868|ANKRD9|122416|ankyrin repeat domain 9
hg19_v1_chr1_-_102462789_102462792	0.274591	SOX2.p2	NM_058170|OLFM3|118427|olfactomedin 3
hg19_v1_chr1_+_40915773_40915827	0.274069	SOX2.p2	AK091612|ZNF643|65243|zinc finger protein 643	AL137241|ZNF643|65243|zinc finger protein 643
hg19_v1_chr7_-_148725731_148725755	0.274047	SOX2.p2	BC006344|PDIA4|9601|protein disulfide isomerase family A, member 4	BC011754|PDIA4|9601|protein disulfide isomerase family A, member 4	AK313299|PDIA4|9601|protein disulfide isomerase family A, member 4
hg19_v1_chr12_-_54582588_54582785	0.273967	SOX2.p2	BC088352|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	BC000417|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK091468|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	NM_001243789|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	NM_001243790|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	BC105607|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK001789|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK001235|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK222473|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK290274|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	NM_001243787|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	NM_001243788|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	NM_001243791|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	NM_014311|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1
hg19_v1_chr11_+_77532159_77532248	0.273529	SOX2.p2	AF092136|C11orf67|28971|chromosome 11 open reading frame 67	AK024688|C11orf67|28971|chromosome 11 open reading frame 67	BC002752|C11orf67|28971|chromosome 11 open reading frame 67	NM_024684|C11orf67|28971|chromosome 11 open reading frame 67
hg19_v1_chr22_+_35777051_35777086	0.273331	SOX2.p2	CR456505|HMOX1|3162|heme oxygenase (decycling) 1	NM_002133|HMOX1|3162|heme oxygenase (decycling) 1	X06985|HMOX1|3162|heme oxygenase (decycling) 1
hg19_v1_chr18_-_53177999_53177999	0.272443	SOX2.p2	AK096862|TCF4|6925|transcription factor 4	NM_001243231|TCF4|6925|transcription factor 4
hg19_v1_chr9_-_107690336_107690433	0.272265	SOX2.p2	BC146856|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1	AF285167|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1	BC034824|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1
hg19_v1_chr14_-_21493122_21493271	0.270611	SOX2.p2	AK096999|NDRG2|57447|NDRG family member 2	CR749252|NDRG2|57447|NDRG family member 2	BX647748|NDRG2|57447|NDRG family member 2	AF087872|NDRG2|57447|NDRG family member 2	AK024521|NDRG2|57447|NDRG family member 2	AK090657|NDRG2|57447|NDRG family member 2	AK130029|NDRG2|57447|NDRG family member 2	AK057843|NDRG2|57447|NDRG family member 2	AK057847|NDRG2|57447|NDRG family member 2	NM_201538|NDRG2|57447|NDRG family member 2	NM_201539|NDRG2|57447|NDRG family member 2	NM_201540|NDRG2|57447|NDRG family member 2	NM_201541|NDRG2|57447|NDRG family member 2
hg19_v1_chr19_-_49401937_49401995	0.27032	SOX2.p2	U82469|TULP2|7288|tubby like protein 2	BC026070|TULP2|7288|tubby like protein 2	NM_003323|TULP2|7288|tubby like protein 2
hg19_v1_chr3_-_155394104_155394204	0.27022	SOX2.p2	NM_001130960|PLCH1|23007|phospholipase C, eta 1	NM_001130961|PLCH1|23007|phospholipase C, eta 1	AK096620|PLCH1|23007|phospholipase C, eta 1
hg19_v1_chr1_-_208417635_208417664	0.269683	SOX2.p2	NM_025179|PLXNA2|5362|plexin A2
hg19_v1_chr9_+_91003987_91004010	0.269533	SOX2.p2	AK315854|SPIN1|10927|spindlin 1
hg19_v1_chrX_+_105937067_105937084	0.268345	SOX2.p2	BC036901|RNF128|79589|ring finger protein 128	NM_024539|RNF128|79589|ring finger protein 128	AK126553|RNF128|79589|ring finger protein 128
hg19_v1_chrX_+_36254050_36254050	0.268341	SOX2.p2	NM_001098843|CXorf30|645090|chromosome X open reading frame 30
hg19_v1_chr20_-_44718545_44718562	0.268164	SOX2.p2	AF230533|NCOA5|57727|nuclear receptor coactivator 5
hg19_v1_chr1_-_108231122_108231127	0.267815	SOX2.p2	AF035442|VAV3|10451|vav 3 guanine nucleotide exchange factor	AK300474|VAV3|10451|vav 3 guanine nucleotide exchange factor	AK304088|VAV3|10451|vav 3 guanine nucleotide exchange factor	AK316295|VAV3|10451|vav 3 guanine nucleotide exchange factor	NM_001079874|VAV3|10451|vav 3 guanine nucleotide exchange factor
hg19_v1_chr13_-_31039966_31040021	0.267815	SOX2.p2	X12597|HMGB1|3146|high mobility group box 1	D63874|HMGB1|3146|high mobility group box 1	AB208998|HMGB1|3146|high mobility group box 1	BC141844|HMGB1|3146|high mobility group box 1	BC003378|HMGB1|3146|high mobility group box 1	BC066889|HMGB1|3146|high mobility group box 1	BC030981|HMGB1|3146|high mobility group box 1	BC067732|HMGB1|3146|high mobility group box 1
hg19_v1_chr1_-_57888785_57888871	0.267568	SOX2.p2	AK313144|DAB1|1600|disabled homolog 1 (Drosophila)
hg19_v1_chr16_-_68482373_68482590	0.267488	SOX2.p2	AK289651|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)	NM_018667|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)	BC041828|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)
hg19_v1_chr7_+_63773185_63773185	0.2671	SOX2.p2	NM_001170905|ZNF736|728927|zinc finger protein 736
hg19_v1_chr5_+_36606456_36606456	0.26633	SOX2.p2	NM_001166696|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	NM_004172|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg19_v1_chr2_+_189839132_189839215	0.265893	SOX2.p2	X07240|COL3A1|1281|collagen, type III, alpha 1
hg19_v1_chr3_-_151987332_151987359	0.265812	SOX2.p2	AK304857|LOC401093|401093|uncharacterized LOC401093	AK316515|LOC401093|401093|uncharacterized LOC401093
hg19_v1_chrX_-_117119282_117119375	0.265615	SOX2.p2	AK296324|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168299|KLHL13|90293|kelch-like 13 (Drosophila)
hg19_v1_chr10_+_24755459_24755479	0.264589	SOX2.p2	BX640796|KIAA1217|56243|KIAA1217	BX648451|KIAA1217|56243|KIAA1217	BC098577|KIAA1217|56243|KIAA1217
hg19_v1_chr1_-_154164551_154164608	0.264321	SOX2.p2	X04201|TPM3|7170|tropomyosin 3	BC062740|TPM3|7170|tropomyosin 3	AK092690|TPM3|7170|tropomyosin 3	BC008407|TPM3|7170|tropomyosin 3	BC008425|TPM3|7170|tropomyosin 3	AK056997|TPM3|7170|tropomyosin 3	NM_152263|TPM3|7170|tropomyosin 3
hg19_v1_chrX_+_12993224_12993256	0.264278	SOX2.p2	BC107789|TMSB4X|7114|thymosin beta 4, X-linked	NM_021109|TMSB4X|7114|thymosin beta 4, X-linked	M17733|TMSB4X|7114|thymosin beta 4, X-linked	AK055976|TMSB4X|7114|thymosin beta 4, X-linked	AK057827|TMSB4X|7114|thymosin beta 4, X-linked	AK311747|TMSB4X|7114|thymosin beta 4, X-linked	BC016732|TMSB4X|7114|thymosin beta 4, X-linked	BC022857|TMSB4X|7114|thymosin beta 4, X-linked	BC062436|TMSB4X|7114|thymosin beta 4, X-linked	BC070248|TMSB4X|7114|thymosin beta 4, X-linked	BC070249|TMSB4X|7114|thymosin beta 4, X-linked	BC083509|TMSB4X|7114|thymosin beta 4, X-linked	BC092437|TMSB4X|7114|thymosin beta 4, X-linked	BC104666|TMSB4X|7114|thymosin beta 4, X-linked	BC061586|TMSB4X|7114|thymosin beta 4, X-linked	BC151215|TMSB4X|7114|thymosin beta 4, X-linked	BC139925|TMSB4X|7114|thymosin beta 4, X-linked	BC101790|TMSB4X|7114|thymosin beta 4, X-linked	BC101792|TMSB4X|7114|thymosin beta 4, X-linked	BC001631|TMSB4X|7114|thymosin beta 4, X-linked	BC064954|TMSB4X|7114|thymosin beta 4, X-linked	BC128103|TMSB4X|7114|thymosin beta 4, X-linked	BC141975|TMSB4X|7114|thymosin beta 4, X-linked	BC141976|TMSB4X|7114|thymosin beta 4, X-linked	BC128102|TMSB4X|7114|thymosin beta 4, X-linked
hg19_v1_chr7_+_149570004_149570080	0.264181	SOX2.p2	AF452639|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2	AK057700|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2	NM_001100592|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2	NM_145230|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2
hg19_v1_chr7_-_44887697_44887756	0.264139	SOX2.p2	NM_012412|H2AFV|94239|H2A histone family, member V	NM_138635|H2AFV|94239|H2A histone family, member V	NM_201436|H2AFV|94239|H2A histone family, member V	NM_201516|H2AFV|94239|H2A histone family, member V	NM_201517|H2AFV|94239|H2A histone family, member V
hg19_v1_chr1_-_217311095_217311096	0.263399	SOX2.p2	CR749497|ESRRG|2104|estrogen-related receptor gamma	BX647076|ESRRG|2104|estrogen-related receptor gamma	NM_001134285|ESRRG|2104|estrogen-related receptor gamma
hg19_v1_chr4_-_141075232_141075433	0.263305	SOX2.p2	NM_018717|MAML3|55534|mastermind-like 3 (Drosophila)
hg19_v1_chr1_+_53527822_53527900	0.262104	SOX2.p2	AY358294|PODN|127435|podocan	AK314096|PODN|127435|podocan	AK300847|PODN|127435|podocan	AK296649|PODN|127435|podocan	AK299375|PODN|127435|podocan	AK304599|PODN|127435|podocan	AY313607|PODN|127435|podocan	BC030608|PODN|127435|podocan	NM_001199081|PODN|127435|podocan	BC028292|PODN|127435|podocan
hg19_v1_chr13_+_98086681_98086724	0.262067	SOX2.p2	AF205602|RAP2A|5911|RAP2A, member of RAS oncogene family	BC070031|RAP2A|5911|RAP2A, member of RAS oncogene family	EU832309|RAP2A|5911|RAP2A, member of RAS oncogene family	EU832393|RAP2A|5911|RAP2A, member of RAS oncogene family	X12534|RAP2A|5911|RAP2A, member of RAS oncogene family	AF493914|RAP2A|5911|RAP2A, member of RAS oncogene family
hg19_v1_chr11_+_14926542_14926557	0.262061	SOX2.p2	AK054728|CALCB|797|calcitonin-related polypeptide beta
hg19_v1_chr5_-_111093030_111093133	0.261609	SOX2.p2	NM_001142482|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142481|C5orf13|9315|chromosome 5 open reading frame 13
hg19_v1_chr1_+_36348813_36348815	0.260921	SOX2.p2	BC063275|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1
hg19_v1_chr14_+_69658193_69658214	0.260766	SOX2.p2	NM_001193360|EXD2|55218|exonuclease 3'-5' domain containing 2	NM_001193361|EXD2|55218|exonuclease 3'-5' domain containing 2	NM_018199|EXD2|55218|exonuclease 3'-5' domain containing 2
hg19_v1_chr4_+_48485276_48485578	0.260445	SOX2.p2	AK126542|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	NM_152679|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	BC019066|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	BC012048|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	DQ892628|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	EU176704|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	AY704414|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4
hg19_v1_chr22_+_24115035_24115056	0.260293	SOX2.p2	AK075448|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)	AK129792|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)	NM_005940|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)	X57766|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)	BC057788|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)
hg19_v1_chr3_-_120169493_120170182	0.26008	SOX2.p2	BC000055|FSTL1|11167|follistatin-like 1	U06863|FSTL1|11167|follistatin-like 1	AK300356|FSTL1|11167|follistatin-like 1	AK289388|FSTL1|11167|follistatin-like 1	AK291138|FSTL1|11167|follistatin-like 1	AK311050|FSTL1|11167|follistatin-like 1	AK300436|FSTL1|11167|follistatin-like 1	BX647421|FSTL1|11167|follistatin-like 1	AK312261|FSTL1|11167|follistatin-like 1	NM_007085|FSTL1|11167|follistatin-like 1
hg19_v1_chr2_+_66662692_66662988	0.259666	SOX2.p2	BC036511|MEIS1|4211|Meis homeobox 1	AK314949|MEIS1|4211|Meis homeobox 1	U85707|MEIS1|4211|Meis homeobox 1
hg19_v1_chr13_+_37393306_37393493	0.259591	SOX2.p2	NM_000538|RFXAP|5994|regulatory factor X-associated protein	AK313912|RFXAP|5994|regulatory factor X-associated protein	BC026088|RFXAP|5994|regulatory factor X-associated protein	DQ891169|RFXAP|5994|regulatory factor X-associated protein	DQ893581|RFXAP|5994|regulatory factor X-associated protein	DQ894352|RFXAP|5994|regulatory factor X-associated protein
hg19_v1_chr3_-_49459870_49460011	0.259587	SOX2.p2	BC007546|AMT|275|aminomethyltransferase	AK293481|AMT|275|aminomethyltransferase	AK293594|AMT|275|aminomethyltransferase	AK294592|AMT|275|aminomethyltransferase	AK290600|AMT|275|aminomethyltransferase	AK301072|AMT|275|aminomethyltransferase	AK091738|AMT|275|aminomethyltransferase	BC094771|AMT|275|aminomethyltransferase	AK296177|AMT|275|aminomethyltransferase	AK096062|AMT|275|aminomethyltransferase	D13811|AMT|275|aminomethyltransferase
hg19_v1_chr12_-_54653317_54653332	0.25941	SOX2.p2	BC006821|CBX5|23468|chromobox homolog 5	NM_001127322|CBX5|23468|chromobox homolog 5
hg19_v1_chr22_+_29999649_30000080	0.259308	SOX2.p2	BC020257|NF2|4771|neurofibromin 2 (merlin)	BC003112|NF2|4771|neurofibromin 2 (merlin)	L11353|NF2|4771|neurofibromin 2 (merlin)	Z22664|NF2|4771|neurofibromin 2 (merlin)	CR456530|NF2|4771|neurofibromin 2 (merlin)	AF122827|NF2|4771|neurofibromin 2 (merlin)	AF122828|NF2|4771|neurofibromin 2 (merlin)	AF123570|NF2|4771|neurofibromin 2 (merlin)	CU013130|NF2|4771|neurofibromin 2 (merlin)	CU013418|NF2|4771|neurofibromin 2 (merlin)	DQ891697|NF2|4771|neurofibromin 2 (merlin)	DQ894878|NF2|4771|neurofibromin 2 (merlin)	AF369661|NF2|4771|neurofibromin 2 (merlin)	AF369662|NF2|4771|neurofibromin 2 (merlin)	AF369663|NF2|4771|neurofibromin 2 (merlin)	AF369664|NF2|4771|neurofibromin 2 (merlin)	AF369665|NF2|4771|neurofibromin 2 (merlin)	AF369666|NF2|4771|neurofibromin 2 (merlin)	AF369667|NF2|4771|neurofibromin 2 (merlin)	AF369668|NF2|4771|neurofibromin 2 (merlin)	EF517524|NF2|4771|neurofibromin 2 (merlin)	S73853|NF2|4771|neurofibromin 2 (merlin)
hg19_v1_chr4_-_17806820_17806917	0.258991	SOX2.p2	BC050697|DCAF16|54876|DDB1 and CUL4 associated factor 16
hg19_v1_chr1_+_82266081_82266081	0.258159	SOX2.p2	AF104266|LPHN2|23266|latrophilin 2	AF104938|LPHN2|23266|latrophilin 2	AF104939|LPHN2|23266|latrophilin 2	NM_012302|LPHN2|23266|latrophilin 2
hg19_v1_chr7_+_128828712_128828712	0.258122	SOX2.p2	BC009989|SMO|6608|smoothened, frizzled family receptor	NM_005631|SMO|6608|smoothened, frizzled family receptor
hg19_v1_chr4_+_124317884_124318029	0.25795	SOX2.p2	AY192146|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)	NM_199327|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)
hg19_v1_chr4_-_103266577_103266692	0.257176	SOX2.p2	AF193052|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	BC012125|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	NM_001135146|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8
hg19_v1_chr20_-_44718517_44718531	0.257019	SOX2.p2	BC056872|NCOA5|57727|nuclear receptor coactivator 5
hg19_v1_chr8_-_17579729_17579729	0.256963	SOX2.p2	AK125188|MTUS1|57509|microtubule associated tumor suppressor 1	FJ472826|MTUS1|57509|microtubule associated tumor suppressor 1	NM_001001931|MTUS1|57509|microtubule associated tumor suppressor 1
hg19_v1_chr11_-_85430382_85430382	0.256122	SOX2.p2	NM_001162952|SYTL2|54843|synaptotagmin-like 2	NM_206930|SYTL2|54843|synaptotagmin-like 2
hg19_v1_chr15_-_79103571_79103930	0.255923	SOX2.p2	AY327122|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	AF140675|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	BC061631|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	NM_014272|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	AK299844|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7
hg19_v1_chr12_-_54653369_54653373	0.25574	SOX2.p2	NM_001127321|CBX5|23468|chromobox homolog 5
hg19_v1_chr1_+_36348795_36348812	0.255659	SOX2.p2	AF093097|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1	NM_012199|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1
hg19_v1_chr14_-_81405883_81405883	0.25486	SOX2.p2	NM_152446|CEP128|145508|centrosomal protein 128kDa
hg19_v1_chr3_-_178969644_178969644	0.25481	SOX2.p2	NM_171830|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3
hg19_v1_chr12_-_16760935_16761147	0.25465	SOX2.p2	AF258348|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	BC017777|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AB044746|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK095595|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK308826|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001001395|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001243609|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr5_+_137514753_137514878	0.254191	SOX2.p2	AK296879|KIF20A|10112|kinesin family member 20A	AK025790|KIF20A|10112|kinesin family member 20A	AF153329|KIF20A|10112|kinesin family member 20A	BC012999|KIF20A|10112|kinesin family member 20A
hg19_v1_chr5_+_65017993_65018200	0.254104	SOX2.p2	NM_020726|NLN|57486|neurolysin (metallopeptidase M3 family)	AK096416|NLN|57486|neurolysin (metallopeptidase M3 family)	AK292803|NLN|57486|neurolysin (metallopeptidase M3 family)	AJ300837|NLN|57486|neurolysin (metallopeptidase M3 family)	BC001644|NLN|57486|neurolysin (metallopeptidase M3 family)	BC004985|NLN|57486|neurolysin (metallopeptidase M3 family)	AB463138|NLN|57486|neurolysin (metallopeptidase M3 family)	AB033052|NLN|57486|neurolysin (metallopeptidase M3 family)
hg19_v1_chr17_+_28256873_28256920	0.254089	SOX2.p2	AK302745|EFCAB5|374786|EF-hand calcium binding domain 5	AK303060|EFCAB5|374786|EF-hand calcium binding domain 5	NM_001145053|EFCAB5|374786|EF-hand calcium binding domain 5	AK299608|EFCAB5|374786|EF-hand calcium binding domain 5
hg19_v1_chr1_-_23857711_23857711	0.253604	SOX2.p2	L22846|E2F2|1870|E2F transcription factor 2	NM_004091|E2F2|1870|E2F transcription factor 2
hg19_v1_chr14_+_69658215_69658290	0.253492	SOX2.p2	CR936729|EXD2|55218|exonuclease 3'-5' domain containing 2	BX647767|EXD2|55218|exonuclease 3'-5' domain containing 2	CR936728|EXD2|55218|exonuclease 3'-5' domain containing 2	AK056025|EXD2|55218|exonuclease 3'-5' domain containing 2	AL834434|EXD2|55218|exonuclease 3'-5' domain containing 2
hg19_v1_chr1_+_166808721_166808770	0.253435	SOX2.p2	AB040946|POGK|57645|pogo transposable element with KRAB domain	NM_017542|POGK|57645|pogo transposable element with KRAB domain	AK056711|POGK|57645|pogo transposable element with KRAB domain	BC131624|POGK|57645|pogo transposable element with KRAB domain
hg19_v1_chr1_+_24286311_24286382	0.25281	SOX2.p2	AF151042|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC068475|PNRC2|55629|proline-rich nuclear receptor coactivator 2	AK311305|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC001959|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC085018|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC078177|PNRC2|55629|proline-rich nuclear receptor coactivator 2	AF374386|PNRC2|55629|proline-rich nuclear receptor coactivator 2
hg19_v1_chr2_+_75061234_75061287	0.252688	SOX2.p2	AF148513|HK2|3099|hexokinase 2	BC021116|HK2|3099|hexokinase 2	BC064369|HK2|3099|hexokinase 2	AK290357|HK2|3099|hexokinase 2
hg19_v1_chr14_+_79745653_79745755	0.252499	SOX2.p2	NM_001105250|NRXN3|9369|neurexin 3	NM_138970|NRXN3|9369|neurexin 3	AK056530|NRXN3|9369|neurexin 3	BC059368|NRXN3|9369|neurexin 3	BC068469|NRXN3|9369|neurexin 3
hg19_v1_chr1_-_179833581_179833588	0.252339	SOX2.p2	
hg19_v1_chr3_-_112359863_112359904	0.252196	SOX2.p2	BX647117|CCDC80|151887|coiled-coil domain containing 80	BC116178|CCDC80|151887|coiled-coil domain containing 80	BC116179|CCDC80|151887|coiled-coil domain containing 80	AY333429|CCDC80|151887|coiled-coil domain containing 80	AF506819|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr9_+_91003238_91003428	0.25216	SOX2.p2	NM_006717|SPIN1|10927|spindlin 1	BC013571|SPIN1|10927|spindlin 1	AL136719|SPIN1|10927|spindlin 1	AK092017|SPIN1|10927|spindlin 1	AF087864|SPIN1|10927|spindlin 1	AF106682|SPIN1|10927|spindlin 1	AK290009|SPIN1|10927|spindlin 1
hg19_v1_chr1_-_151118932_151119163	0.252039	SOX2.p2	AF339152|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AF339153|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AF339154|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AB022434|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AB058772|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AK302862|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AK311613|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	NM_001178061|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	NM_001178062|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	NM_030913|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
hg19_v1_chrX_-_135962872_135962916	0.251675	SOX2.p2	BC006550|RBMX|27316|RNA binding motif protein, X-linked	BC007435|RBMX|27316|RNA binding motif protein, X-linked	BX647131|RBMX|27316|RNA binding motif protein, X-linked	AK091520|RBMX|27316|RNA binding motif protein, X-linked	AK096015|RBMX|27316|RNA binding motif protein, X-linked	AK304573|RBMX|27316|RNA binding motif protein, X-linked	AK304868|RBMX|27316|RNA binding motif protein, X-linked	AK309911|RBMX|27316|RNA binding motif protein, X-linked
hg19_v1_chrX_-_131573638_131573717	0.251126	SOX2.p2	AF491305|MBNL3|55796|muscleblind-like 3 (Drosophila)	EU446986|MBNL3|55796|muscleblind-like 3 (Drosophila)	BC074775|MBNL3|55796|muscleblind-like 3 (Drosophila)	BC074776|MBNL3|55796|muscleblind-like 3 (Drosophila)	AB077698|MBNL3|55796|muscleblind-like 3 (Drosophila)	AB077699|MBNL3|55796|muscleblind-like 3 (Drosophila)	AF467070|MBNL3|55796|muscleblind-like 3 (Drosophila)	AJ427918|MBNL3|55796|muscleblind-like 3 (Drosophila)	AJ427919|MBNL3|55796|muscleblind-like 3 (Drosophila)	AY072692|MBNL3|55796|muscleblind-like 3 (Drosophila)	NM_018388|MBNL3|55796|muscleblind-like 3 (Drosophila)	NM_133486|MBNL3|55796|muscleblind-like 3 (Drosophila)
hg19_v1_chr8_-_124553253_124553447	0.251044	SOX2.p2	AY059629|FBXO32|114907|F-box protein 32	AJ420108|FBXO32|114907|F-box protein 32	AK056986|FBXO32|114907|F-box protein 32	EF143260|FBXO32|114907|F-box protein 32
hg19_v1_chr2_-_60780404_60780641	0.250307	SOX2.p2	AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)
hg19_v1_chr1_-_182357871_182357935	0.250117	SOX2.p2	AY486122|GLUL|2752|glutamate-ammonia ligase	S70290|GLUL|2752|glutamate-ammonia ligase	DQ893278|GLUL|2752|glutamate-ammonia ligase	DQ896609|GLUL|2752|glutamate-ammonia ligase	EU832658|GLUL|2752|glutamate-ammonia ligase	EU832735|GLUL|2752|glutamate-ammonia ligase
hg19_v1_chr4_+_113152838_113153331	0.249966	SOX2.p2	NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein
hg19_v1_chr9_-_88874518_88874549	0.249402	SOX2.p2	NM_001010907|C9orf153|389766|chromosome 9 open reading frame 153	BC108665|C9orf153|389766|chromosome 9 open reading frame 153
hg19_v1_chr2_-_106810756_106810760	0.248199	SOX2.p2	AK075120|UXS1|80146|UDP-glucuronate decarboxylase 1	AK075170|UXS1|80146|UDP-glucuronate decarboxylase 1	AK122696|UXS1|80146|UDP-glucuronate decarboxylase 1
hg19_v1_chr8_-_18666295_18666404	0.247911	SOX2.p2	BC045112|PSD3|23362|pleckstrin and Sec7 domain containing 3	AB023159|PSD3|23362|pleckstrin and Sec7 domain containing 3	NM_206909|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg19_v1_chr20_+_10415949_10416004	0.247428	SOX2.p2	BC020787|C20orf94|128710|chromosome 20 open reading frame 94	BC026094|C20orf94|128710|chromosome 20 open reading frame 94	NM_001009608|C20orf94|128710|chromosome 20 open reading frame 94
hg19_v1_chr18_-_21891469_21891469	0.247015	SOX2.p2	AK301862|OSBPL1A|114876|oxysterol binding protein-like 1A	NM_001242508|OSBPL1A|114876|oxysterol binding protein-like 1A
hg19_v1_chr14_+_75894919_75895107	0.24685	SOX2.p2	NM_001135048|JDP2|122953|Jun dimerization protein 2	BC068196|JDP2|122953|Jun dimerization protein 2	NM_130469|JDP2|122953|Jun dimerization protein 2
hg19_v1_chr13_-_29292961_29293149	0.246828	SOX2.p2	BX537565|SLC46A3|283537|solute carrier family 46, member 3	BC060850|SLC46A3|283537|solute carrier family 46, member 3	BC068556|SLC46A3|283537|solute carrier family 46, member 3	AK093932|SLC46A3|283537|solute carrier family 46, member 3	BC036662|SLC46A3|283537|solute carrier family 46, member 3	NM_001135919|SLC46A3|283537|solute carrier family 46, member 3	NM_181785|SLC46A3|283537|solute carrier family 46, member 3
hg19_v1_chr1_+_28261503_28261620	0.246347	SOX2.p2	NM_001009568|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	NM_014474|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	AK301349|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	AK293566|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	AK316500|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	BC014444|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	Y08134|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	AK293489|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B
hg19_v1_chr12_-_81331449_81331486	0.246219	SOX2.p2	AK309256|LIN7A|8825|lin-7 homolog A (C. elegans)
hg19_v1_chr18_-_52988916_52989089	0.246154	SOX2.p2	M74718|TCF4|6925|transcription factor 4	FR748220|TCF4|6925|transcription factor 4	FR748221|TCF4|6925|transcription factor 4	AK300038|TCF4|6925|transcription factor 4	NM_001243234|TCF4|6925|transcription factor 4	NM_001243235|TCF4|6925|transcription factor 4
hg19_v1_chr5_+_34687663_34687663	0.246111	SOX2.p2	AY354204|RAI14|26064|retinoic acid induced 14	NM_001145523|RAI14|26064|retinoic acid induced 14
hg19_v1_chr5_+_40909617_40909673	0.245973	SOX2.p2	BC063851|C7|730|complement component 7	AK304848|C7|730|complement component 7	AK312737|C7|730|complement component 7
hg19_v1_chr4_+_88896801_88896819	0.245596	SOX2.p2	NM_000582|SPP1|6696|secreted phosphoprotein 1	NM_001040058|SPP1|6696|secreted phosphoprotein 1	NM_001040060|SPP1|6696|secreted phosphoprotein 1	NM_001251829|SPP1|6696|secreted phosphoprotein 1	NM_001251830|SPP1|6696|secreted phosphoprotein 1	JF412667|SPP1|6696|secreted phosphoprotein 1	BC093033|SPP1|6696|secreted phosphoprotein 1
hg19_v1_chr15_-_90347173_90347178	0.244098	SOX2.p2	AK298134|ANPEP|290|alanyl (membrane) aminopeptidase
hg19_v1_chr5_+_176562084_176562141	0.24408	SOX2.p2	AF322907|NSD1|64324|nuclear receptor binding SET domain protein 1	AY049721|NSD1|64324|nuclear receptor binding SET domain protein 1	BC144629|NSD1|64324|nuclear receptor binding SET domain protein 1	BC150628|NSD1|64324|nuclear receptor binding SET domain protein 1	BC139789|NSD1|64324|nuclear receptor binding SET domain protein 1
hg19_v1_chrX_-_139866582_139866722	0.243983	SOX2.p2	M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	NM_004065|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa
hg19_v1_chr12_-_102591547_102591613	0.243279	SOX2.p2	DQ892335|PMCH|5367|pro-melanin-concentrating hormone	DQ895540|PMCH|5367|pro-melanin-concentrating hormone	M57703|PMCH|5367|pro-melanin-concentrating hormone	BC018048|PMCH|5367|pro-melanin-concentrating hormone	NM_002674|PMCH|5367|pro-melanin-concentrating hormone
hg19_v1_chr1_+_229440128_229440128	0.242595	SOX2.p2	BC107681|SPHAR|10638|S-phase response (cyclin related)	NM_006542|SPHAR|10638|S-phase response (cyclin related)
hg19_v1_chr6_+_21593963_21594781	0.24237	SOX2.p2	NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4	AF070669|SOX4|6659|SRY (sex determining region Y)-box 4	AF124147|SOX4|6659|SRY (sex determining region Y)-box 4	BC072668|SOX4|6659|SRY (sex determining region Y)-box 4	X70683|SOX4|6659|SRY (sex determining region Y)-box 4	EU446655|SOX4|6659|SRY (sex determining region Y)-box 4
hg19_v1_chr7_-_44887663_44887675	0.242022	SOX2.p2	AK023973|H2AFV|94239|H2A histone family, member V
hg19_v1_chr3_-_71294229_71294315	0.241588	SOX2.p2	AK074321|FOXP1|27086|forkhead box P1	NM_001244814|FOXP1|27086|forkhead box P1
hg19_v1_chr6_-_139094788_139094815	0.241079	SOX2.p2	AK092592|LOC100507462|100507462|uncharacterized LOC100507462	NM_001242740|LOC100507462|100507462|uncharacterized LOC100507462
hg19_v1_chr1_+_26737232_26737270	0.240087	SOX2.p2	BC028566|LIN28A|79727|lin-28 homolog A (C. elegans)	NM_024674|LIN28A|79727|lin-28 homolog A (C. elegans)
hg19_v1_chr7_-_131241321_131241405	0.239802	SOX2.p2	BC042466|PODXL|5420|podocalyxin-like	U97519|PODXL|5420|podocalyxin-like	AK223573|PODXL|5420|podocalyxin-like	AK055816|PODXL|5420|podocalyxin-like	NM_001018111|PODXL|5420|podocalyxin-like	NM_005397|PODXL|5420|podocalyxin-like
hg19_v1_chr11_+_63057371_63057429	0.239631	SOX2.p2	AK298430|SLC22A10|387775|solute carrier family 22, member 10	AB075876|SLC22A10|387775|solute carrier family 22, member 10	NM_001039752|SLC22A10|387775|solute carrier family 22, member 10
hg19_v1_chr15_-_76304762_76304784	0.238902	SOX2.p2	CR749519|NRG4|145957|neuregulin 4	AK311507|NRG4|145957|neuregulin 4	BC017568|NRG4|145957|neuregulin 4	NM_138573|NRG4|145957|neuregulin 4
hg19_v1_chr5_+_34656482_34656543	0.238859	SOX2.p2	BC052988|RAI14|26064|retinoic acid induced 14	AF155135|RAI14|26064|retinoic acid induced 14	AK314379|RAI14|26064|retinoic acid induced 14
hg19_v1_chr1_-_212004113_212004148	0.238799	SOX2.p2	D86960|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1	NM_014873|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1
hg19_v1_chr5_+_76435073_76435100	0.238495	SOX2.p2	
hg19_v1_chr22_+_18632841_18632964	0.238316	SOX2.p2	AK313385|USP18|11274|ubiquitin specific peptidase 18	AL136690|USP18|11274|ubiquitin specific peptidase 18	BC014896|USP18|11274|ubiquitin specific peptidase 18
hg19_v1_chr2_-_86422504_86422590	0.238063	SOX2.p2	CR456793|IMMT|10989|inner membrane protein, mitochondrial	EU831472|IMMT|10989|inner membrane protein, mitochondrial	EU831559|IMMT|10989|inner membrane protein, mitochondrial	AY232292|IMMT|10989|inner membrane protein, mitochondrial	AK300017|IMMT|10989|inner membrane protein, mitochondrial	BC002412|IMMT|10989|inner membrane protein, mitochondrial	AK296676|IMMT|10989|inner membrane protein, mitochondrial	AY921637|IMMT|10989|inner membrane protein, mitochondrial	AK312251|IMMT|10989|inner membrane protein, mitochondrial	AK299014|IMMT|10989|inner membrane protein, mitochondrial	AK309004|IMMT|10989|inner membrane protein, mitochondrial	AK225780|IMMT|10989|inner membrane protein, mitochondrial	AK304197|IMMT|10989|inner membrane protein, mitochondrial	BC005983|IMMT|10989|inner membrane protein, mitochondrial	BC107419|IMMT|10989|inner membrane protein, mitochondrial	D21091|IMMT|10989|inner membrane protein, mitochondrial	D21094|IMMT|10989|inner membrane protein, mitochondrial
hg19_v1_chr4_-_76649557_76649794	0.238032	SOX2.p2	
hg19_v1_chr17_+_65373362_65373456	0.237647	SOX2.p2	BC037261|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1
hg19_v1_chr7_+_5632435_5632441	0.237357	SOX2.p2	NM_003088|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	AK095254|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	AK316607|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)
hg19_v1_chr6_-_139695739_139695783	0.236448	SOX2.p2	BC004377|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	U65093|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	AF109161|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
hg19_v1_chrX_-_13835313_13835318	0.235886	SOX2.p2	NM_001001995|GPM6B|2824|glycoprotein M6B	NM_001001996|GPM6B|2824|glycoprotein M6B	NM_005278|GPM6B|2824|glycoprotein M6B
hg19_v1_chr2_+_207406815_207406857	0.235517	SOX2.p2	AK129906|ADAM23|8745|ADAM metallopeptidase domain 23
hg19_v1_chr15_+_34261088_34261088	0.23495	SOX2.p2	AK095198|CHRM5|1133|cholinergic receptor, muscarinic 5	NM_012125|CHRM5|1133|cholinergic receptor, muscarinic 5
hg19_v1_chr8_+_38585703_38585703	0.23493	SOX2.p2	BX647696|TACC1|6867|transforming, acidic coiled-coil containing protein 1	NM_001146216|TACC1|6867|transforming, acidic coiled-coil containing protein 1
hg19_v1_chr9_-_14313509_14313718	0.234437	SOX2.p2	BT007266|NFIB|4781|nuclear factor I/B	DQ891097|NFIB|4781|nuclear factor I/B	DQ894279|NFIB|4781|nuclear factor I/B	EU832141|NFIB|4781|nuclear factor I/B	EU832234|NFIB|4781|nuclear factor I/B	AK290603|NFIB|4781|nuclear factor I/B	BC001283|NFIB|4781|nuclear factor I/B	U85193|NFIB|4781|nuclear factor I/B
hg19_v1_chr7_+_80267782_80267831	0.234164	SOX2.p2	NM_000072|CD36|948|CD36 molecule (thrombospondin receptor)	NM_001001548|CD36|948|CD36 molecule (thrombospondin receptor)
hg19_v1_chr2_+_201676597_201676632	0.233505	SOX2.p2	Z70221|BZW1|9689|basic leucine zipper and W2 domains 1	AK096489|BZW1|9689|basic leucine zipper and W2 domains 1
hg19_v1_chr20_+_42086468_42086516	0.233475	SOX2.p2	NM_006275|SRSF6|6431|serine/arginine-rich splicing factor 6
hg19_v1_chr1_+_24286300_24286310	0.233354	SOX2.p2	NM_017761|PNRC2|55629|proline-rich nuclear receptor coactivator 2
hg19_v1_chr2_-_86422591_86422720	0.232578	SOX2.p2	BX537369|IMMT|10989|inner membrane protein, mitochondrial	L42572|IMMT|10989|inner membrane protein, mitochondrial
hg19_v1_chr9_+_132934685_132934942	0.232421	SOX2.p2	BC004856|NCS1|23413|neuronal calcium sensor 1	NM_014286|NCS1|23413|neuronal calcium sensor 1	AF134479|NCS1|23413|neuronal calcium sensor 1	AF186409|NCS1|23413|neuronal calcium sensor 1	X84048|NCS1|23413|neuronal calcium sensor 1
hg19_v1_chr13_-_51417831_51418074	0.231855	SOX2.p2	AY357595|DLEU7|220107|deleted in lymphocytic leukemia, 7	BC104892|DLEU7|220107|deleted in lymphocytic leukemia, 7	BC112009|DLEU7|220107|deleted in lymphocytic leukemia, 7	NM_198989|DLEU7|220107|deleted in lymphocytic leukemia, 7	AK126830|DLEU7|220107|deleted in lymphocytic leukemia, 7
hg19_v1_chr10_-_5045967_5046093	0.231357	SOX2.p2	M33376|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AB021654|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AB031084|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	BT006653|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	DQ890680|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	DQ893862|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	S68330|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	BC007024|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	U05598|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK296419|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK308385|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK296686|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	NM_001135241|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK290304|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AB209017|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)
hg19_v1_chr3_+_14444083_14444149	0.230865	SOX2.p2	NM_001134367|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	NM_001134368|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	NM_003043|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	AK308417|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	BC111489|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	AK307284|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	AK309534|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	BC137128|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	BC137129|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	BC144490|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	BC006252|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	AB209172|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6
hg19_v1_chr6_-_24583454_24583454	0.230611	SOX2.p2	AK310289|KIAA0319|9856|KIAA0319	NM_001252328|KIAA0319|9856|KIAA0319
hg19_v1_chr5_+_140792507_140792742	0.230584	SOX2.p2	BC014509|PCDHGA10|56106|protocadherin gamma subfamily A, 10	BC093873|PCDHGA10|56106|protocadherin gamma subfamily A, 10	BC093875|PCDHGA10|56106|protocadherin gamma subfamily A, 10	AF152319|PCDHGA10|56106|protocadherin gamma subfamily A, 10	AF152503|PCDHGA10|56106|protocadherin gamma subfamily A, 10	NM_018913|PCDHGA10|56106|protocadherin gamma subfamily A, 10	NM_032090|PCDHGA10|56106|protocadherin gamma subfamily A, 10
hg19_v1_chr12_-_8043743_8043794	0.230505	SOX2.p2	AK299037|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14	AK316238|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14
hg19_v1_chr6_-_24719286_24719402	0.230428	SOX2.p2	AK022681|C6orf62|81688|chromosome 6 open reading frame 62	AB075502|C6orf62|81688|chromosome 6 open reading frame 62	AL136632|C6orf62|81688|chromosome 6 open reading frame 62	NM_030939|C6orf62|81688|chromosome 6 open reading frame 62
hg19_v1_chr2_+_101869327_101869347	0.230345	SOX2.p2	NM_017546|C2orf29|55571|chromosome 2 open reading frame 29
hg19_v1_chr14_-_60097531_60097536	0.229813	SOX2.p2	AK290534|RTN1|6252|reticulon 1	NM_206852|RTN1|6252|reticulon 1
hg19_v1_chr4_+_159690208_159690363	0.229376	SOX2.p2	AB040883|FNIP2|57600|folliculin interacting protein 2	AL713802|FNIP2|57600|folliculin interacting protein 2
hg19_v1_chrX_+_150151757_150151857	0.228555	SOX2.p2	BX537505|HMGB3|3149|high mobility group box 3	NM_005342|HMGB3|3149|high mobility group box 3	Y10043|HMGB3|3149|high mobility group box 3	BC070482|HMGB3|3149|high mobility group box 3
hg19_v1_chr22_-_36236421_36236629	0.22823	SOX2.p2	AF229058|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	AL009266|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	AK314632|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	BC013115|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	BC025281|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	AK291460|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001031695|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001082576|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001082577|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_014309|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2
hg19_v1_chr12_+_131438451_131438455	0.227296	SOX2.p2	BX649116|GPR133|283383|G protein-coupled receptor 133	NM_198827|GPR133|283383|G protein-coupled receptor 133
hg19_v1_chr2_+_181845088_181845363	0.226842	SOX2.p2	NM_182678|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3	NM_006357|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3
hg19_v1_chr2_-_192711651_192711826	0.226832	SOX2.p2	DQ891440|SDPR|8436|serum deprivation response	DQ894617|SDPR|8436|serum deprivation response	BC016475|SDPR|8436|serum deprivation response	AF085481|SDPR|8436|serum deprivation response	AK026943|SDPR|8436|serum deprivation response
hg19_v1_chr7_+_55433140_55433140	0.226454	SOX2.p2	AK095857|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	NM_018697|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)
hg19_v1_chrX_+_99839789_99840014	0.226443	SOX2.p2	NM_022144|TNMD|64102|tenomodulin	AF191770|TNMD|64102|tenomodulin	BC034030|TNMD|64102|tenomodulin	AF291656|TNMD|64102|tenomodulin	AF234259|TNMD|64102|tenomodulin	AY358706|TNMD|64102|tenomodulin	AB055421|TNMD|64102|tenomodulin
hg19_v1_chr4_+_17616246_17616286	0.226393	SOX2.p2	AF318059|MED28|80306|mediator complex subunit 28	AK313928|MED28|80306|mediator complex subunit 28	AF358829|MED28|80306|mediator complex subunit 28	NM_025205|MED28|80306|mediator complex subunit 28	BC011936|MED28|80306|mediator complex subunit 28	AF317680|MED28|80306|mediator complex subunit 28	DQ893391|MED28|80306|mediator complex subunit 28	DQ896713|MED28|80306|mediator complex subunit 28	AF317679|MED28|80306|mediator complex subunit 28	AF317678|MED28|80306|mediator complex subunit 28
hg19_v1_chr1_+_64239566_64239753	0.2262	SOX2.p2	AK308088|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	BC080541|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	NM_001083592|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	NM_005012|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	BC006374|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	M97675|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1
hg19_v1_chr11_-_47207425_47207431	0.225997	SOX2.p2	AK300968|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3	AK000577|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3	NM_001184975|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3
hg19_v1_chr1_+_10459084_10459174	0.225868	SOX2.p2	NM_002631|PGD|5226|phosphogluconate dehydrogenase	AK300952|PGD|5226|phosphogluconate dehydrogenase	AK290404|PGD|5226|phosphogluconate dehydrogenase	AK296889|PGD|5226|phosphogluconate dehydrogenase	AK303898|PGD|5226|phosphogluconate dehydrogenase	AK304423|PGD|5226|phosphogluconate dehydrogenase	BC000368|PGD|5226|phosphogluconate dehydrogenase	U30255|PGD|5226|phosphogluconate dehydrogenase	AK298830|PGD|5226|phosphogluconate dehydrogenase
hg19_v1_chr10_-_21807120_21807188	0.225798	SOX2.p2	
hg19_v1_chr16_-_75528925_75528925	0.225075	SOX2.p2	AF280086|CHST6|4166|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6	NM_021615|CHST6|4166|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6
hg19_v1_chr4_+_39408541_39408557	0.224629	SOX2.p2	BC104871|KLB|152831|klotho beta	BC113653|KLB|152831|klotho beta	BC143575|KLB|152831|klotho beta
hg19_v1_chr16_-_4322695_4322961	0.224338	SOX2.p2	X57435|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	DQ893617|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	DQ895293|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	CR541726|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	BC010576|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)
hg19_v1_chr3_-_149086884_149086954	0.224273	SOX2.p2	X75684|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr14_+_64971226_64971291	0.224174	SOX2.p2	BX248777|ZBTB1|22890|zinc finger and BTB domain containing 1	NM_001123329|ZBTB1|22890|zinc finger and BTB domain containing 1	NM_014950|ZBTB1|22890|zinc finger and BTB domain containing 1
hg19_v1_chr1_-_86043932_86044049	0.224109	SOX2.p2	BX648145|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1	NM_001134445|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1	AK304876|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1
hg19_v1_chr7_+_96745904_96745904	0.223772	SOX2.p2	BC028409|ACN9|57001|ACN9 homolog (S. cerevisiae)	NM_020186|ACN9|57001|ACN9 homolog (S. cerevisiae)
hg19_v1_chr16_+_8814567_8814593	0.223601	SOX2.p2	AK290501|ABAT|18|4-aminobutyrate aminotransferase	NM_001127448|ABAT|18|4-aminobutyrate aminotransferase	AK310771|ABAT|18|4-aminobutyrate aminotransferase
hg19_v1_chr12_+_12938540_12938614	0.22348	SOX2.p2	BC126433|APOLD1|81575|apolipoprotein L domain containing 1	BC126435|APOLD1|81575|apolipoprotein L domain containing 1	NM_030817|APOLD1|81575|apolipoprotein L domain containing 1	AK225176|APOLD1|81575|apolipoprotein L domain containing 1	AK314392|APOLD1|81575|apolipoprotein L domain containing 1	AL136783|APOLD1|81575|apolipoprotein L domain containing 1
hg19_v1_chrX_-_33229428_33229672	0.222741	SOX2.p2	S60972|DMD|1756|dystrophin	X14298|DMD|1756|dystrophin	AK309142|DMD|1756|dystrophin	M18533|DMD|1756|dystrophin	BC010932|DMD|1756|dystrophin	NM_004006|DMD|1756|dystrophin
hg19_v1_chr9_-_140142165_140142221	0.222549	SOX2.p2	HQ258370|FAM166A|401565|family with sequence similarity 166, member A	BC132916|FAM166A|401565|family with sequence similarity 166, member A	BC132918|FAM166A|401565|family with sequence similarity 166, member A	AK097419|FAM166A|401565|family with sequence similarity 166, member A	AY604177|FAM166A|401565|family with sequence similarity 166, member A	NM_001001710|FAM166A|401565|family with sequence similarity 166, member A
hg19_v1_chr4_+_154125589_154125621	0.222486	SOX2.p2	AK308731|TRIM2|23321|tripartite motif containing 2	NM_015271|TRIM2|23321|tripartite motif containing 2	AB011089|TRIM2|23321|tripartite motif containing 2	AF220018|TRIM2|23321|tripartite motif containing 2
hg19_v1_chr12_+_53442972_53443010	0.222343	SOX2.p2	AK172747|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)
hg19_v1_chr1_-_149889362_149889446	0.221778	SOX2.p2	AB018279|SV2A|9900|synaptic vesicle glycoprotein 2A	BC045111|SV2A|9900|synaptic vesicle glycoprotein 2A	AK291718|SV2A|9900|synaptic vesicle glycoprotein 2A	AK075480|SV2A|9900|synaptic vesicle glycoprotein 2A	BX537754|SV2A|9900|synaptic vesicle glycoprotein 2A	BC034038|SV2A|9900|synaptic vesicle glycoprotein 2A	NM_014849|SV2A|9900|synaptic vesicle glycoprotein 2A
hg19_v1_chr6_-_112575880_112575911	0.221669	SOX2.p2	BC066552|LAMA4|3910|laminin, alpha 4
hg19_v1_chr7_+_156435670_156435720	0.22157	SOX2.p2	NM_001184997|RNF32|140545|ring finger protein 32	AF325690|RNF32|140545|ring finger protein 32
hg19_v1_chr17_-_42264075_42264107	0.221251	SOX2.p2	NM_178542|C17orf65|339201|chromosome 17 open reading frame 65
hg19_v1_chr15_+_63050761_63050788	0.221209	SOX2.p2	BX648144|TLN2|83660|talin 2	BX648146|TLN2|83660|talin 2
hg19_v1_chr10_-_99393175_99393343	0.220828	SOX2.p2	AK289406|MORN4|118812|MORN repeat containing 4	DQ338435|MORN4|118812|MORN repeat containing 4	DQ338436|MORN4|118812|MORN repeat containing 4	AL834132|MORN4|118812|MORN repeat containing 4	BC022054|MORN4|118812|MORN repeat containing 4	BC093023|MORN4|118812|MORN repeat containing 4	AK098791|MORN4|118812|MORN repeat containing 4	AJ312050|MORN4|118812|MORN repeat containing 4	NM_178832|MORN4|118812|MORN repeat containing 4
hg19_v1_chr8_-_95449131_95449179	0.220825	SOX2.p2	AF007866|RAD54B|25788|RAD54 homolog B (S. cerevisiae)	NM_001205263|RAD54B|25788|RAD54 homolog B (S. cerevisiae)
hg19_v1_chr12_+_7055753_7055888	0.22078	SOX2.p2	BC002523|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	BC007667|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	AK300167|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	BT007390|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	DQ891946|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	DQ895133|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6
hg19_v1_chr10_+_102123420_102123604	0.220339	SOX2.p2	
hg19_v1_chr19_+_38397880_38397945	0.219921	SOX2.p2	BC150620|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3	BC036863|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3
hg19_v1_chr7_+_116312412_116312532	0.219525	SOX2.p2	EU176015|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	J02958|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	NM_000245|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	NM_001127500|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	X54559|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	BC130420|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	AK309532|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)
hg19_v1_chr11_-_117166247_117166385	0.219477	SOX2.p2	AB177847|BACE1|23621|beta-site APP-cleaving enzyme 1	AK296015|BACE1|23621|beta-site APP-cleaving enzyme 1	AK296535|BACE1|23621|beta-site APP-cleaving enzyme 1	NM_001207048|BACE1|23621|beta-site APP-cleaving enzyme 1	NM_001207049|BACE1|23621|beta-site APP-cleaving enzyme 1
hg19_v1_chrX_+_38211735_38211913	0.219413	SOX2.p2	BC107153|OTC|5009|ornithine carbamoyltransferase	BC107154|OTC|5009|ornithine carbamoyltransferase	NM_000531|OTC|5009|ornithine carbamoyltransferase	BC114496|OTC|5009|ornithine carbamoyltransferase	AK292757|OTC|5009|ornithine carbamoyltransferase	K02100|OTC|5009|ornithine carbamoyltransferase	BC074745|OTC|5009|ornithine carbamoyltransferase
hg19_v1_chr2_-_133429069_133429151	0.219356	SOX2.p2	NM_001077427|LYPD1|116372|LY6/PLAUR domain containing 1	AK309668|LYPD1|116372|LY6/PLAUR domain containing 1
hg19_v1_chr1_+_84630575_84630648	0.21934	SOX2.p2	AY927366|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AY927367|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AY927368|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AK091420|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242860|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242861|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta
hg19_v1_chr6_+_119215240_119215577	0.218774	SOX2.p2	NM_014034|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AK025738|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AL050261|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	BC010878|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AB028628|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AF279306|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	CR457347|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)
hg19_v1_chr5_+_15500768_15500785	0.218415	SOX2.p2	AF199356|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg19_v1_chr3_-_169530451_169530693	0.218102	SOX2.p2	AK293661|LRRC34|151827|leucine rich repeat containing 34	AK095125|LRRC34|151827|leucine rich repeat containing 34	NM_001172779|LRRC34|151827|leucine rich repeat containing 34	NM_001172780|LRRC34|151827|leucine rich repeat containing 34	NM_153353|LRRC34|151827|leucine rich repeat containing 34
hg19_v1_chr2_-_86422892_86422892	0.218099	SOX2.p2	NM_001100169|IMMT|10989|inner membrane protein, mitochondrial	NM_001100170|IMMT|10989|inner membrane protein, mitochondrial	NM_006839|IMMT|10989|inner membrane protein, mitochondrial
hg19_v1_chr11_-_5863126_5863126	0.218054	SOX2.p2	NM_001005167|OR52E6|390078|olfactory receptor, family 52, subfamily E, member 6
hg19_v1_chr12_-_16759939_16760083	0.217971	SOX2.p2	AK308594|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK294909|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001243613|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr14_+_69658482_69658551	0.217591	SOX2.p2	AK292563|EXD2|55218|exonuclease 3'-5' domain containing 2	NM_001193362|EXD2|55218|exonuclease 3'-5' domain containing 2	NM_001193363|EXD2|55218|exonuclease 3'-5' domain containing 2	AK295601|EXD2|55218|exonuclease 3'-5' domain containing 2	BX161412|EXD2|55218|exonuclease 3'-5' domain containing 2
hg19_v1_chr5_-_146460991_146461053	0.217571	SOX2.p2	AK294659|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	NM_181677|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	NM_181678|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	AK295347|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta
hg19_v1_chr3_-_48936227_48936436	0.217416	SOX2.p2	DQ892599|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20	DQ895828|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20	BC001689|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20	AK312962|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20	AK301744|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20	NM_000387|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20
hg19_v1_chrX_+_142967172_142967172	0.217265	SOX2.p2	GU727624|UBE2NL|389898|ubiquitin-conjugating enzyme E2N-like	NM_001012989|UBE2NL|389898|ubiquitin-conjugating enzyme E2N-like
hg19_v1_chr12_-_81331487_81331693	0.217239	SOX2.p2	CR407680|LIN7A|8825|lin-7 homolog A (C. elegans)	BC099921|LIN7A|8825|lin-7 homolog A (C. elegans)	AK315321|LIN7A|8825|lin-7 homolog A (C. elegans)	BC046926|LIN7A|8825|lin-7 homolog A (C. elegans)	BC062332|LIN7A|8825|lin-7 homolog A (C. elegans)	BC118609|LIN7A|8825|lin-7 homolog A (C. elegans)	BC122561|LIN7A|8825|lin-7 homolog A (C. elegans)	AF087693|LIN7A|8825|lin-7 homolog A (C. elegans)	AF173081|LIN7A|8825|lin-7 homolog A (C. elegans)	NM_004664|LIN7A|8825|lin-7 homolog A (C. elegans)
hg19_v1_chr2_-_190627923_190627952	0.217097	SOX2.p2	AK314565|OSGEPL1|64172|O-sialoglycoprotein endopeptidase-like 1	NM_022353|OSGEPL1|64172|O-sialoglycoprotein endopeptidase-like 1	AK055441|OSGEPL1|64172|O-sialoglycoprotein endopeptidase-like 1
hg19_v1_chr10_+_91092238_91092329	0.216744	SOX2.p2	NM_001031683|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	AK297137|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	AF026939|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	BC001383|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	BC004977|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3
hg19_v1_chr20_-_5591487_5591688	0.215792	SOX2.p2	AB037855|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	AK308111|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	BC027588|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	NM_019593|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
hg19_v1_chr1_-_115259381_115259388	0.215782	SOX2.p2	BC005219|NRAS|4893|neuroblastoma RAS viral (v-ras) oncogene homolog
hg19_v1_chr2_-_21252786_21252800	0.215697	SOX2.p2	M12480|APOB|338|apolipoprotein B (including Ag(x) antigen)
hg19_v1_chr20_+_60718473_60719049	0.215501	SOX2.p2	AK125656|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	AK291485|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	AK299881|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	NM_198935|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	BC034494|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	BX640848|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	AK308765|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	BC068993|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	AB014593|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	DQ890908|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	EU176499|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1
hg19_v1_chr1_-_85930610_85930640	0.215405	SOX2.p2	BC043235|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1
hg19_v1_chr11_-_111750144_111750180	0.215252	SOX2.p2	AK311254|FDXACB1|91893|ferredoxin-fold anticodon binding domain containing 1	NM_138378|FDXACB1|91893|ferredoxin-fold anticodon binding domain containing 1
hg19_v1_chr1_-_169555624_169555705	0.214874	SOX2.p2	AK226079|F5|2153|coagulation factor V (proaccelerin, labile factor)	M14335|F5|2153|coagulation factor V (proaccelerin, labile factor)	M16967|F5|2153|coagulation factor V (proaccelerin, labile factor)
hg19_v1_chr6_+_123100860_123100939	0.214605	SOX2.p2	AK311867|FABP7|2173|fatty acid binding protein 7, brain	AK289836|FABP7|2173|fatty acid binding protein 7, brain	AJ002962|FABP7|2173|fatty acid binding protein 7, brain	U51338|FABP7|2173|fatty acid binding protein 7, brain	D50373|FABP7|2173|fatty acid binding protein 7, brain	D88648|FABP7|2173|fatty acid binding protein 7, brain	AL512688|FABP7|2173|fatty acid binding protein 7, brain	U81235|FABP7|2173|fatty acid binding protein 7, brain	CR457057|FABP7|2173|fatty acid binding protein 7, brain	DQ891437|FABP7|2173|fatty acid binding protein 7, brain	DQ894613|FABP7|2173|fatty acid binding protein 7, brain	EU176601|FABP7|2173|fatty acid binding protein 7, brain
hg19_v1_chr17_-_42264023_42264073	0.214539	SOX2.p2	AK055685|C17orf65|339201|chromosome 17 open reading frame 65
hg19_v1_chr2_-_77749335_77749501	0.214268	SOX2.p2	BC098267|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	BC098301|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	BC099738|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	BC110058|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	AY358324|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	AK122612|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	AK126961|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	NM_001134745|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	NM_024993|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4
hg19_v1_chr5_+_179921371_179921416	0.214265	SOX2.p2	NM_015455|CNOT6|57472|CCR4-NOT transcription complex, subunit 6
hg19_v1_chr1_+_145727665_145727703	0.213559	SOX2.p2	NM_001201325|PDZK1|5174|PDZ domain containing 1	NM_001201326|PDZK1|5174|PDZ domain containing 1	NM_002614|PDZK1|5174|PDZ domain containing 1
hg19_v1_chr5_-_147162251_147162257	0.213224	SOX2.p2	AF273057|JAKMIP2|9832|janus kinase and microtubule interacting protein 2	NM_014790|JAKMIP2|9832|janus kinase and microtubule interacting protein 2
hg19_v1_chr7_+_73498106_73498146	0.21315	SOX2.p2	AK290162|LIMK1|3984|LIM domain kinase 1	NM_002314|LIMK1|3984|LIM domain kinase 1
hg19_v1_chr3_-_139258373_139258472	0.212932	SOX2.p2	CR541979|RBP1|5947|retinol binding protein 1, cellular	CR542005|RBP1|5947|retinol binding protein 1, cellular	EU831403|RBP1|5947|retinol binding protein 1, cellular	EU831495|RBP1|5947|retinol binding protein 1, cellular	BC121052|RBP1|5947|retinol binding protein 1, cellular	M36809|RBP1|5947|retinol binding protein 1, cellular
hg19_v1_chr16_+_67465019_67465041	0.212811	SOX2.p2	U26726|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2	BC036780|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2	BC064536|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2	NM_000196|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2	U14631|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2
hg19_v1_chr22_-_43343046_43343046	0.212672	SOX2.p2	BC008037|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2	NM_007229|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2
hg19_v1_chr7_+_134464372_134464407	0.212524	SOX2.p2	AK298524|CALD1|800|caldesmon 1	AK304729|CALD1|800|caldesmon 1	AF247820|CALD1|800|caldesmon 1	M83216|CALD1|800|caldesmon 1
hg19_v1_chr4_-_139163222_139163506	0.212293	SOX2.p2	AJ277882|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AB040875|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	BC012087|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AK314855|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AF252872|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AB026891|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AF200708|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AK290359|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	NM_014331|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11
hg19_v1_chr12_-_121734474_121734541	0.211804	SOX2.p2	BC026060|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	AF140507|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	AF425668|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	AK300865|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta
hg19_v1_chr22_+_21271723_21271939	0.211693	SOX2.p2	BC043500|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
hg19_v1_chr3_-_170744767_170744767	0.211567	SOX2.p2	NM_000340|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2
hg19_v1_chr19_-_52674895_52674895	0.211509	SOX2.p2	BC011784|ZNF836|162962|zinc finger protein 836	NM_001102657|ZNF836|162962|zinc finger protein 836
hg19_v1_chr10_-_25241504_25241561	0.211459	SOX2.p2	AF226056|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AB209792|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK222674|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK294130|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK021950|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	NM_020200|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	BC008662|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK309614|PRTFDC1|56952|phosphoribosyl transferase domain containing 1
hg19_v1_chr2_-_21228189_21228308	0.211018	SOX2.p2	X03325|APOB|338|apolipoprotein B (including Ag(x) antigen)
hg19_v1_chr11_-_118661856_118661862	0.210836	SOX2.p2	BC026228|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg19_v1_chr4_+_41614933_41615091	0.210607	SOX2.p2	AK299835|LIMCH1|22998|LIM and calponin homology domains 1
hg19_v1_chr2_+_38155901_38155901	0.210398	SOX2.p2	BC024243|FAM82A1|151393|family with sequence similarity 82, member A1	NM_001170792|FAM82A1|151393|family with sequence similarity 82, member A1
hg19_v1_chr2_-_172290435_172290618	0.210353	SOX2.p2	AK124092|METTL8|79828|methyltransferase like 8	BC025250|METTL8|79828|methyltransferase like 8	AK024046|METTL8|79828|methyltransferase like 8
hg19_v1_chr16_-_4323000_4323025	0.209638	SOX2.p2	NM_003223|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	S73885|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)
hg19_v1_chr5_+_36608430_36608563	0.209245	SOX2.p2	NM_001166695|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	U03504|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AY954110|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg19_v1_chr1_-_44482996_44483011	0.209091	SOX2.p2	NM_006934|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	NM_201649|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	S70609|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	S70612|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	AK315233|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9
hg19_v1_chr17_-_7298160_7298161	0.208968	SOX2.p2	NM_001201576|PLSCR3|57048|phospholipid scramblase 3	NM_020360|PLSCR3|57048|phospholipid scramblase 3
hg19_v1_chr2_-_238499317_238499375	0.208476	SOX2.p2	BC009827|RAB17|64284|RAB17, member RAS oncogene family	BC050426|RAB17|64284|RAB17, member RAS oncogene family	AL136645|RAB17|64284|RAB17, member RAS oncogene family
hg19_v1_chr4_+_141178439_141178439	0.207497	SOX2.p2	AK027797|SCOC|60592|short coiled-coil protein	NM_032547|SCOC|60592|short coiled-coil protein
hg19_v1_chr16_-_11367451_11367451	0.207465	SOX2.p2	NM_021247|PRM3|58531|protamine 3
hg19_v1_chr5_-_121413967_121413979	0.207403	SOX2.p2	BC089436|LOX|4015|lysyl oxidase	AK312269|LOX|4015|lysyl oxidase
hg19_v1_chr12_+_64803741_64803815	0.20727	SOX2.p2	BC020569|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)	Y16414|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)	AF039022|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)
hg19_v1_chr4_-_110624550_110624632	0.20721	SOX2.p2	DQ894589|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	EU176306|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	U20537|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	BC000305|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	BC004460|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	NM_001226|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	NM_032992|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	U20536|CASP6|839|caspase 6, apoptosis-related cysteine peptidase
hg19_v1_chr6_+_27925018_27925018	0.207158	SOX2.p2	BC109251|OR2B6|26212|olfactory receptor, family 2, subfamily B, member 6	BC110457|OR2B6|26212|olfactory receptor, family 2, subfamily B, member 6	NM_012367|OR2B6|26212|olfactory receptor, family 2, subfamily B, member 6
hg19_v1_chr1_+_151630710_151630762	0.206833	SOX2.p2	BC107862|SNX27|81609|sorting nexin family member 27
hg19_v1_chrX_+_9432980_9433489	0.206718	SOX2.p2	Y12781|TBL1X|6907|transducin (beta)-like 1X-linked	BC052304|TBL1X|6907|transducin (beta)-like 1X-linked	NM_005647|TBL1X|6907|transducin (beta)-like 1X-linked
hg19_v1_chr6_+_44187241_44187471	0.206486	SOX2.p2	NM_001078174|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	NM_004955|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	BC095398|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AK090491|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AK304285|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AB490708|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AX775997|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	U81375|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AF079117|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1
hg19_v1_chr21_+_40817793_40817797	0.206452	SOX2.p2	NM_001001713|SH3BGR|6450|SH3 domain binding glutamic acid-rich protein
hg19_v1_chr5_+_140777603_140777694	0.205957	SOX2.p2	BC093877|PCDHGB5|56101|protocadherin gamma subfamily B, 5	BC093879|PCDHGB5|56101|protocadherin gamma subfamily B, 5	AF152334|PCDHGB5|56101|protocadherin gamma subfamily B, 5	AF152521|PCDHGB5|56101|protocadherin gamma subfamily B, 5	NM_018925|PCDHGB5|56101|protocadherin gamma subfamily B, 5	NM_032099|PCDHGB5|56101|protocadherin gamma subfamily B, 5
hg19_v1_chr11_-_115088628_115088669	0.205596	SOX2.p2	AY309502|CADM1|23705|cell adhesion molecule 1
hg19_v1_chrX_-_10535476_10535642	0.204992	SOX2.p2	AF041210|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY539988|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY539994|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY540022|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY540023|MID1|4281|midline 1 (Opitz/BBB syndrome)	EU446510|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193278|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193279|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193280|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193281|MID1|4281|midline 1 (Opitz/BBB syndrome)
hg19_v1_chr7_-_44887620_44887654	0.204876	SOX2.p2	BC014885|H2AFV|94239|H2A histone family, member V	AB209001|H2AFV|94239|H2A histone family, member V	AK129989|H2AFV|94239|H2A histone family, member V	BC000098|H2AFV|94239|H2A histone family, member V	BC070169|H2AFV|94239|H2A histone family, member V
hg19_v1_chr8_+_136470108_136470294	0.204867	SOX2.p2	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3	DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3	AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3
hg19_v1_chr8_+_61429390_61429491	0.204424	SOX2.p2	NM_001242644|RAB2A|5862|RAB2A, member RAS oncogene family	NM_002865|RAB2A|5862|RAB2A, member RAS oncogene family
hg19_v1_chrX_-_106959597_106959710	0.204394	SOX2.p2	BC018148|TSC22D3|1831|TSC22 domain family, member 3	Z50781|TSC22D3|1831|TSC22 domain family, member 3	NM_001015881|TSC22D3|1831|TSC22 domain family, member 3
hg19_v1_chr8_-_125579395_125579418	0.204392	SOX2.p2	AK126989|MTSS1|9788|metastasis suppressor 1
hg19_v1_chr5_-_14871555_14872155	0.204365	SOX2.p2	DQ892588|ANKH|56172|ankylosis, progressive homolog (mouse)	DQ895806|ANKH|56172|ankylosis, progressive homolog (mouse)	AK222631|ANKH|56172|ankylosis, progressive homolog (mouse)	AK315012|ANKH|56172|ankylosis, progressive homolog (mouse)	BC014526|ANKH|56172|ankylosis, progressive homolog (mouse)	AF274753|ANKH|56172|ankylosis, progressive homolog (mouse)	AY358503|ANKH|56172|ankylosis, progressive homolog (mouse)	AB046801|ANKH|56172|ankylosis, progressive homolog (mouse)	BC009835|ANKH|56172|ankylosis, progressive homolog (mouse)	NM_054027|ANKH|56172|ankylosis, progressive homolog (mouse)
hg19_v1_chr5_-_83680590_83680738	0.204193	SOX2.p2	BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3
hg19_v1_chr4_-_151770611_151770688	0.203931	SOX2.p2	AB208838|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing
hg19_v1_chr18_-_24128499_24128522	0.203812	SOX2.p2	NM_001142730|KCTD1|284252|potassium channel tetramerisation domain containing 1
hg19_v1_chr3_-_71632741_71633215	0.20367	SOX2.p2	AK122710|FOXP1|27086|forkhead box P1	NM_001244808|FOXP1|27086|forkhead box P1	BC005055|FOXP1|27086|forkhead box P1	BC054815|FOXP1|27086|forkhead box P1	BC071893|FOXP1|27086|forkhead box P1	BC080521|FOXP1|27086|forkhead box P1	BC068481|FOXP1|27086|forkhead box P1	NM_001012505|FOXP1|27086|forkhead box P1	NM_001244810|FOXP1|27086|forkhead box P1	NM_032682|FOXP1|27086|forkhead box P1
hg19_v1_chr14_+_90863302_90863345	0.203631	SOX2.p2	NM_006888|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)
hg19_v1_chr12_+_109967734_109967788	0.203547	SOX2.p2	AK304678|UBE3B|89910|ubiquitin protein ligase E3B
hg19_v1_chr5_+_147648374_147648422	0.203206	SOX2.p2	EF108324|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	EF426754|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	BC128163|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	BC128164|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	NM_001040129|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)
hg19_v1_chr2_-_198175458_198175488	0.203196	SOX2.p2	BC063622|ANKRD44|91526|ankyrin repeat domain 44
hg19_v1_chr16_-_28550227_28550317	0.202737	SOX2.p2	BT006896|NUPR1|26471|nuclear protein, transcriptional regulator, 1	CR542144|NUPR1|26471|nuclear protein, transcriptional regulator, 1	BC002434|NUPR1|26471|nuclear protein, transcriptional regulator, 1	AK312135|NUPR1|26471|nuclear protein, transcriptional regulator, 1	AF135266|NUPR1|26471|nuclear protein, transcriptional regulator, 1
hg19_v1_chr9_-_14313899_14313907	0.202203	SOX2.p2	AK299605|NFIB|4781|nuclear factor I/B
hg19_v1_chr2_+_27805892_27805979	0.202119	SOX2.p2	NM_032434|ZNF512|84450|zinc finger protein 512	BC093041|ZNF512|84450|zinc finger protein 512	AK293771|ZNF512|84450|zinc finger protein 512	AK316299|ZNF512|84450|zinc finger protein 512	BC043221|ZNF512|84450|zinc finger protein 512	AK057028|ZNF512|84450|zinc finger protein 512	BX647996|ZNF512|84450|zinc finger protein 512	AK299818|ZNF512|84450|zinc finger protein 512	BC015707|ZNF512|84450|zinc finger protein 512	AK294055|ZNF512|84450|zinc finger protein 512	AK316011|ZNF512|84450|zinc finger protein 512
hg19_v1_chr1_-_182360181_182360261	0.201946	SOX2.p2	BC031964|GLUL|2752|glutamate-ammonia ligase
hg19_v1_chr13_-_50367027_50367220	0.201809	SOX2.p2	BC035090|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)	NM_002267|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)
hg19_v1_chr1_+_104097321_104097321	0.201744	SOX2.p2	NM_020978|AMY2B|280|amylase, alpha 2B (pancreatic)
hg19_v1_chr7_-_44887567_44887589	0.201558	SOX2.p2	AF081192|H2AFV|94239|H2A histone family, member V
hg19_v1_chr4_+_159690176_159690181	0.201386	SOX2.p2	NM_020840|FNIP2|57600|folliculin interacting protein 2
hg19_v1_chr7_+_2671630_2671777	0.201375	SOX2.p2	BC131824|TTYH3|80727|tweety homolog 3 (Drosophila)	AB162931|TTYH3|80727|tweety homolog 3 (Drosophila)
hg19_v1_chrX_-_13835213_13835231	0.200713	SOX2.p2	AK095657|GPM6B|2824|glycoprotein M6B
hg19_v1_chr11_+_5905500_5905522	0.200419	SOX2.p2	BC136972|OR52E4|390081|olfactory receptor, family 52, subfamily E, member 4	BC136974|OR52E4|390081|olfactory receptor, family 52, subfamily E, member 4	NM_001005165|OR52E4|390081|olfactory receptor, family 52, subfamily E, member 4
hg19_v1_chr3_-_120400957_120401129	0.200188	SOX2.p2	EU831603|HGD|3081|homogentisate 1,2-dioxygenase	EU831690|HGD|3081|homogentisate 1,2-dioxygenase	BC071757|HGD|3081|homogentisate 1,2-dioxygenase	Z75048|HGD|3081|homogentisate 1,2-dioxygenase	U63008|HGD|3081|homogentisate 1,2-dioxygenase	AK290782|HGD|3081|homogentisate 1,2-dioxygenase	BC020792|HGD|3081|homogentisate 1,2-dioxygenase	AF045167|HGD|3081|homogentisate 1,2-dioxygenase
hg19_v1_chr1_+_109419601_109419621	0.200015	SOX2.p2	AB445462|GPSM2|29899|G-protein signaling modulator 2	NM_013296|GPSM2|29899|G-protein signaling modulator 2	AK314249|GPSM2|29899|G-protein signaling modulator 2
hg19_v1_chr5_+_137514416_137514416	0.200001	SOX2.p2	NM_005733|KIF20A|10112|kinesin family member 20A
hg19_v1_chr3_+_149689065_149689096	0.199953	SOX2.p2	BC012363|LOC646903|646903|uncharacterized LOC646903
hg19_v1_chrX_+_46937889_46937971	0.199678	SOX2.p2	BC073173|RGN|9104|regucalcin (senescence marker protein-30)	AB032064|RGN|9104|regucalcin (senescence marker protein-30)
hg19_v1_chr5_+_95067511_95067562	0.199614	SOX2.p2	
hg19_v1_chr8_+_61429551_61429578	0.199326	SOX2.p2	X12953|RAB2A|5862|RAB2A, member RAS oncogene family	BC008929|RAB2A|5862|RAB2A, member RAS oncogene family
hg19_v1_chr18_-_72920989_72921013	0.199294	SOX2.p2	
hg19_v1_chr8_+_98656329_98656426	0.199204	SOX2.p2	BC045642|MTDH|92140|metadherin	NM_178812|MTDH|92140|metadherin	BC001815|MTDH|92140|metadherin
hg19_v1_chr14_-_23288912_23289019	0.19876	SOX2.p2	Y18474|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7	BX248291|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7	AF092032|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7	AJ130718|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7	NM_001126106|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7
hg19_v1_chr4_-_100242487_100242571	0.19842	SOX2.p2	BT019812|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	D00137|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	M24317|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	M21692|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK304396|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	BX647469|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AF153821|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK299409|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK316501|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	X03350|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK301018|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK303945|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	BC033009|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	NM_000668|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide
hg19_v1_chr2_+_162272800_162272843	0.198354	SOX2.p2	AK297438|TBR1|10716|T-box, brain, 1	AK312567|TBR1|10716|T-box, brain, 1	AK226050|TBR1|10716|T-box, brain, 1	BC029289|TBR1|10716|T-box, brain, 1
hg19_v1_chr2_+_101869350_101869435	0.197991	SOX2.p2	AF103798|C2orf29|55571|chromosome 2 open reading frame 29	BC064421|C2orf29|55571|chromosome 2 open reading frame 29	BC018664|C2orf29|55571|chromosome 2 open reading frame 29
hg19_v1_chr17_-_76921205_76921452	0.197508	SOX2.p2	M32304|TIMP2|7077|TIMP metallopeptidase inhibitor 2	J05593|TIMP2|7077|TIMP metallopeptidase inhibitor 2	S48568|TIMP2|7077|TIMP metallopeptidase inhibitor 2	BC052605|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg19_v1_chr16_-_31085503_31085640	0.19721	SOX2.p2	BC021997|ZNF668|79759|zinc finger protein 668	NM_024706|ZNF668|79759|zinc finger protein 668
hg19_v1_chr2_-_128421965_128422166	0.197153	SOX2.p2	AF527767|LIMS2|55679|LIM and senescent cell antigen-like domains 2	AK094954|LIMS2|55679|LIM and senescent cell antigen-like domains 2	AF527764|LIMS2|55679|LIM and senescent cell antigen-like domains 2	NM_017980|LIMS2|55679|LIM and senescent cell antigen-like domains 2
hg19_v1_chr3_-_93782066_93782066	0.197117	SOX2.p2	AK122674|DHFRL1|200895|dihydrofolate reductase-like 1	NM_001195643|DHFRL1|200895|dihydrofolate reductase-like 1
hg19_v1_chr9_-_115774471_115774471	0.197085	SOX2.p2	AK095843|ZNF883|169834|zinc finger protein 883	NM_001101338|ZNF883|169834|zinc finger protein 883
hg19_v1_chr8_+_86376130_86376310	0.196326	SOX2.p2	NM_000067|CA2|760|carbonic anhydrase II	AF015039|CA2|760|carbonic anhydrase II	AK312978|CA2|760|carbonic anhydrase II	BC011949|CA2|760|carbonic anhydrase II	J03037|CA2|760|carbonic anhydrase II	Y00339|CA2|760|carbonic anhydrase II	M36532|CA2|760|carbonic anhydrase II	DQ891320|CA2|760|carbonic anhydrase II	DQ894504|CA2|760|carbonic anhydrase II	CR536526|CA2|760|carbonic anhydrase II	CR541875|CA2|760|carbonic anhydrase II
hg19_v1_chr3_-_178969402_178969417	0.196283	SOX2.p2	AF160968|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3	NM_014407|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3	BC113851|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3
hg19_v1_chrY_-_21154560_21154979	0.196253	SOX2.p2	S75311|CD24P4|938|CD24 molecule pseudogene 4	BT007404|CD24|100133941|CD24 molecule	DQ890636|CD24|100133941|CD24 molecule	DQ893812|CD24|100133941|CD24 molecule	L33930|CD24|100133941|CD24 molecule	M58664|CD24|100133941|CD24 molecule	X69397|CD24|100133941|CD24 molecule	BC064619|CD24|100133941|CD24 molecule	AK026603|CD24|100133941|CD24 molecule	NM_013230|CD24|100133941|CD24 molecule
hg19_v1_chr11_+_57365577_57365767	0.195754	SOX2.p2	GU727623|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	NM_001032295|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	BC011171|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AY732485|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AY732486|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	BT006966|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	DQ891799|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	DQ894982|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1
hg19_v1_chr2_+_109384601_109384766	0.195363	SOX2.p2	AY170822|RANBP2|5903|RAN binding protein 2
hg19_v1_chr3_+_58223415_58223646	0.195134	SOX2.p2	AF225418|ABHD6|57406|abhydrolase domain containing 6	AK122983|ABHD6|57406|abhydrolase domain containing 6	BC001698|ABHD6|57406|abhydrolase domain containing 6
hg19_v1_chr17_+_48262816_48262863	0.195084	SOX2.p2	
hg19_v1_chr17_+_28705960_28705972	0.194984	SOX2.p2	D85390|CPD|1362|carboxypeptidase D	BC045624|CPD|1362|carboxypeptidase D
hg19_v1_chr6_+_112375277_112375558	0.194235	SOX2.p2	BC012028|WISP3|8838|WNT1 inducible signaling pathway protein 3	NM_003880|WISP3|8838|WNT1 inducible signaling pathway protein 3	BC035250|WISP3|8838|WNT1 inducible signaling pathway protein 3	NM_198239|WISP3|8838|WNT1 inducible signaling pathway protein 3	BC105940|WISP3|8838|WNT1 inducible signaling pathway protein 3	BC105941|WISP3|8838|WNT1 inducible signaling pathway protein 3	AY358349|WISP3|8838|WNT1 inducible signaling pathway protein 3	AF100781|WISP3|8838|WNT1 inducible signaling pathway protein 3	AY358350|WISP3|8838|WNT1 inducible signaling pathway protein 3	AB075040|WISP3|8838|WNT1 inducible signaling pathway protein 3
hg19_v1_chr6_-_139695784_139695784	0.194001	SOX2.p2	NM_006079|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
hg19_v1_chr3_+_119013490_119013750	0.193923	SOX2.p2	AK293726|ARHGAP31|57514|Rho GTPase activating protein 31	BC112163|ARHGAP31|57514|Rho GTPase activating protein 31	BC112165|ARHGAP31|57514|Rho GTPase activating protein 31	HQ258543|ARHGAP31|57514|Rho GTPase activating protein 31
hg19_v1_chr5_-_171710642_171710767	0.193652	SOX2.p2	BC019910|UBTD2|92181|ubiquitin domain containing 2	AK313274|UBTD2|92181|ubiquitin domain containing 2
hg19_v1_chr7_+_116660263_116660272	0.193528	SOX2.p2	AK093212|ST7|7982|suppression of tumorigenicity 7
hg19_v1_chr17_-_56065474_56065594	0.193339	SOX2.p2	D28118|VEZF1|7716|vascular endothelial zinc finger 1
hg19_v1_chr2_+_179059071_179059377	0.193214	SOX2.p2	AB208898|OSBPL6|114880|oxysterol binding protein-like 6	NM_001201480|OSBPL6|114880|oxysterol binding protein-like 6	NM_001201481|OSBPL6|114880|oxysterol binding protein-like 6	NM_001201482|OSBPL6|114880|oxysterol binding protein-like 6	NM_032523|OSBPL6|114880|oxysterol binding protein-like 6	BC052259|OSBPL6|114880|oxysterol binding protein-like 6	AK300389|OSBPL6|114880|oxysterol binding protein-like 6	AF323728|OSBPL6|114880|oxysterol binding protein-like 6	AF392448|OSBPL6|114880|oxysterol binding protein-like 6
hg19_v1_chr11_-_64647136_64647186	0.193108	SOX2.p2	AK302930|EHD1|10938|EH-domain containing 1	AK097842|EHD1|10938|EH-domain containing 1
hg19_v1_chr2_-_56151273_56151297	0.193017	SOX2.p2	AK293058|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1	NM_001039348|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1	NM_001039349|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1
hg19_v1_chr7_-_21985421_21985543	0.192833	SOX2.p2	AY161168|CDCA7L|55536|cell division cycle associated 7-like	AY161169|CDCA7L|55536|cell division cycle associated 7-like	BC009352|CDCA7L|55536|cell division cycle associated 7-like	AK095965|CDCA7L|55536|cell division cycle associated 7-like	BC025242|CDCA7L|55536|cell division cycle associated 7-like	BC032576|CDCA7L|55536|cell division cycle associated 7-like	AK300781|CDCA7L|55536|cell division cycle associated 7-like	BC039823|CDCA7L|55536|cell division cycle associated 7-like	AK022955|CDCA7L|55536|cell division cycle associated 7-like	AK292490|CDCA7L|55536|cell division cycle associated 7-like	NM_001127370|CDCA7L|55536|cell division cycle associated 7-like	NM_001127371|CDCA7L|55536|cell division cycle associated 7-like	NM_018719|CDCA7L|55536|cell division cycle associated 7-like
hg19_v1_chr4_-_5889992_5890000	0.192762	SOX2.p2	BT006806|CRMP1|1400|collapsin response mediator protein 1	DQ892528|CRMP1|1400|collapsin response mediator protein 1	DQ895740|CRMP1|1400|collapsin response mediator protein 1
hg19_v1_chr9_+_116356199_116356222	0.192638	SOX2.p2	AF490838|RGS3|5998|regulator of G-protein signaling 3	NM_144489|RGS3|5998|regulator of G-protein signaling 3	AK054584|RGS3|5998|regulator of G-protein signaling 3
hg19_v1_chr5_-_137089990_137090031	0.19262	SOX2.p2	U23803|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0	BC019271|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0	BC001008|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0	BC011972|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0
hg19_v1_chr9_+_71819926_71820077	0.192493	SOX2.p2	NM_001170415|TJP2|9414|tight junction protein 2 (zona occludens 2)	AK302483|TJP2|9414|tight junction protein 2 (zona occludens 2)	AK295034|TJP2|9414|tight junction protein 2 (zona occludens 2)	NM_001170416|TJP2|9414|tight junction protein 2 (zona occludens 2)
hg19_v1_chr13_-_74707913_74708065	0.192455	SOX2.p2	AF161471|KLF12|11278|Kruppel-like factor 12	AF113122|KLF12|11278|Kruppel-like factor 12	NM_007249|KLF12|11278|Kruppel-like factor 12
hg19_v1_chr12_-_69357019_69357020	0.192278	SOX2.p2	J04970|CPM|1368|carboxypeptidase M	NM_001874|CPM|1368|carboxypeptidase M	AK127859|CPM|1368|carboxypeptidase M
hg19_v1_chr2_-_10952855_10952986	0.192081	SOX2.p2	AK294347|PDIA6|10130|protein disulfide isomerase family A, member 6	D49489|PDIA6|10130|protein disulfide isomerase family A, member 6	BC001312|PDIA6|10130|protein disulfide isomerase family A, member 6	NM_005742|PDIA6|10130|protein disulfide isomerase family A, member 6
hg19_v1_chr2_-_188312872_188313020	0.191849	SOX2.p2	DQ280491|CALCRL|10203|calcitonin receptor-like	U17473|CALCRL|10203|calcitonin receptor-like	L76380|CALCRL|10203|calcitonin receptor-like	AK291630|CALCRL|10203|calcitonin receptor-like	AK292998|CALCRL|10203|calcitonin receptor-like	NM_005795|CALCRL|10203|calcitonin receptor-like
hg19_v1_chr6_+_26365397_26365508	0.191621	SOX2.p2	NM_001197247|BTN3A2|11118|butyrophilin, subfamily 3, member A2	NM_001197249|BTN3A2|11118|butyrophilin, subfamily 3, member A2	NM_007047|BTN3A2|11118|butyrophilin, subfamily 3, member A2	AK312847|BTN3A2|11118|butyrophilin, subfamily 3, member A2	AK290880|BTN3A2|11118|butyrophilin, subfamily 3, member A2	U90546|BTN3A2|11118|butyrophilin, subfamily 3, member A2	AK303600|BTN3A2|11118|butyrophilin, subfamily 3, member A2	NM_001197248|BTN3A2|11118|butyrophilin, subfamily 3, member A2	BC002832|BTN3A2|11118|butyrophilin, subfamily 3, member A2	BC020214|BTN3A2|11118|butyrophilin, subfamily 3, member A2	AK299417|BTN3A2|11118|butyrophilin, subfamily 3, member A2
hg19_v1_chr6_+_28092386_28092412	0.191556	SOX2.p2	AK025844|ZSCAN16|80345|zinc finger and SCAN domain containing 16	AK294017|ZSCAN16|80345|zinc finger and SCAN domain containing 16	AK309837|ZSCAN16|80345|zinc finger and SCAN domain containing 16	NM_025231|ZSCAN16|80345|zinc finger and SCAN domain containing 16	BC004255|ZSCAN16|80345|zinc finger and SCAN domain containing 16
hg19_v1_chr5_+_140571903_140572125	0.191411	SOX2.p2	AK056391|PCDHB10|56126|protocadherin beta 10	BC031837|PCDHB10|56126|protocadherin beta 10	NM_018930|PCDHB10|56126|protocadherin beta 10	AY358720|PCDHB10|56126|protocadherin beta 10	AF152489|PCDHB10|56126|protocadherin beta 10	AF217748|PCDHB10|56126|protocadherin beta 10
hg19_v1_chr16_+_10479911_10479924	0.191277	SOX2.p2	AK093414|ATF7IP2|80063|activating transcription factor 7 interacting protein 2	AK296565|ATF7IP2|80063|activating transcription factor 7 interacting protein 2	AK299040|ATF7IP2|80063|activating transcription factor 7 interacting protein 2	BC033891|ATF7IP2|80063|activating transcription factor 7 interacting protein 2
hg19_v1_chrX_+_100878101_100878182	0.190845	SOX2.p2	AK291225|ARMCX3|51566|armadillo repeat containing, X-linked 3	NM_016607|ARMCX3|51566|armadillo repeat containing, X-linked 3	NM_177947|ARMCX3|51566|armadillo repeat containing, X-linked 3	BX647802|ARMCX3|51566|armadillo repeat containing, X-linked 3	AK222655|ARMCX3|51566|armadillo repeat containing, X-linked 3	AB039669|ARMCX3|51566|armadillo repeat containing, X-linked 3	BC005194|ARMCX3|51566|armadillo repeat containing, X-linked 3	CR933656|ARMCX3|51566|armadillo repeat containing, X-linked 3
hg19_v1_chr15_-_40633122_40633167	0.190832	SOX2.p2	AK125329|C15orf52|388115|chromosome 15 open reading frame 52	NM_207380|C15orf52|388115|chromosome 15 open reading frame 52
hg19_v1_chr10_-_119805673_119806415	0.190609	SOX2.p2	DQ013303|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	BC075073|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	BC075074|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	AB023158|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	AY037299|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	NM_014904|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)
hg19_v1_chr20_-_45976626_45976669	0.190608	SOX2.p2	DQ082998|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ082999|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368669|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368670|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368671|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368672|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368673|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368674|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368675|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368676|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368677|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368678|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368679|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368680|ZMYND8|23613|zinc finger, MYND-type containing 8
hg19_v1_chr3_-_149375584_149375887	0.190577	SOX2.p2	AJ299431|WWTR1|25937|WW domain containing transcription regulator 1	BC014052|WWTR1|25937|WW domain containing transcription regulator 1	NM_001168280|WWTR1|25937|WW domain containing transcription regulator 1	NM_015472|WWTR1|25937|WW domain containing transcription regulator 1
hg19_v1_chr14_+_91580356_91580455	0.190246	SOX2.p2	NM_001102366|C14orf159|80017|chromosome 14 open reading frame 159	NM_001102368|C14orf159|80017|chromosome 14 open reading frame 159	NM_001102369|C14orf159|80017|chromosome 14 open reading frame 159	NM_024952|C14orf159|80017|chromosome 14 open reading frame 159	AK097294|C14orf159|80017|chromosome 14 open reading frame 159	AK098752|C14orf159|80017|chromosome 14 open reading frame 159	BX537970|C14orf159|80017|chromosome 14 open reading frame 159	BX161393|C14orf159|80017|chromosome 14 open reading frame 159	BX247989|C14orf159|80017|chromosome 14 open reading frame 159	BC009182|C14orf159|80017|chromosome 14 open reading frame 159	AK308857|C14orf159|80017|chromosome 14 open reading frame 159	AB210031|C14orf159|80017|chromosome 14 open reading frame 159
hg19_v1_chr3_+_69985750_69985873	0.189947	SOX2.p2	NM_000248|MITF|4286|microphthalmia-associated transcription factor	NM_001184968|MITF|4286|microphthalmia-associated transcription factor	NM_198158|MITF|4286|microphthalmia-associated transcription factor	NM_198178|MITF|4286|microphthalmia-associated transcription factor	Z29678|MITF|4286|microphthalmia-associated transcription factor	BC012503|MITF|4286|microphthalmia-associated transcription factor	BC065243|MITF|4286|microphthalmia-associated transcription factor	BC026961|MITF|4286|microphthalmia-associated transcription factor	GU355676|MITF|4286|microphthalmia-associated transcription factor
hg19_v1_chr5_+_140186658_140186772	0.189931	SOX2.p2	AB208925|PCDHA4|56144|protocadherin alpha 4	NM_018907|PCDHA4|56144|protocadherin alpha 4	NM_031500|PCDHA4|56144|protocadherin alpha 4	BC112102|PCDHA4|56144|protocadherin alpha 4	BC113609|PCDHA4|56144|protocadherin alpha 4	AF152312|PCDHA4|56144|protocadherin alpha 4	AF152482|PCDHA4|56144|protocadherin alpha 4	HQ258500|PCDHA4|56144|protocadherin alpha 4
hg19_v1_chr18_+_657461_657632	0.189877	SOX2.p2	NM_001071|TYMS|7298|thymidylate synthetase	BC083512|TYMS|7298|thymidylate synthetase	AK223372|TYMS|7298|thymidylate synthetase	BC013919|TYMS|7298|thymidylate synthetase
hg19_v1_chr16_+_1128780_1128868	0.189384	SOX2.p2	AK308381|SSTR5|6755|somatostatin receptor 5	NM_001053|SSTR5|6755|somatostatin receptor 5	DQ448303|SSTR5|6755|somatostatin receptor 5	DQ448304|SSTR5|6755|somatostatin receptor 5
hg19_v1_chrX_+_48368063_48368208	0.189065	SOX2.p2	AK316378|PORCN|64840|porcupine homolog (Drosophila)	NM_203474|PORCN|64840|porcupine homolog (Drosophila)	NM_203475|PORCN|64840|porcupine homolog (Drosophila)	AF317058|PORCN|64840|porcupine homolog (Drosophila)	AF317059|PORCN|64840|porcupine homolog (Drosophila)	AF317060|PORCN|64840|porcupine homolog (Drosophila)	AF317061|PORCN|64840|porcupine homolog (Drosophila)	DQ892632|PORCN|64840|porcupine homolog (Drosophila)	DQ895869|PORCN|64840|porcupine homolog (Drosophila)
hg19_v1_chr4_-_109087876_109087952	0.18893	SOX2.p2	AK303272|LEF1|51176|lymphoid enhancer-binding factor 1	NM_001166119|LEF1|51176|lymphoid enhancer-binding factor 1
hg19_v1_chr3_-_50360109_50360280	0.188874	SOX2.p2	AK225635|HYAL2|8692|hyaluronoglucosaminidase 2	AJ000099|HYAL2|8692|hyaluronoglucosaminidase 2	U09577|HYAL2|8692|hyaluronoglucosaminidase 2	AK092449|HYAL2|8692|hyaluronoglucosaminidase 2	AK310963|HYAL2|8692|hyaluronoglucosaminidase 2	AK127945|HYAL2|8692|hyaluronoglucosaminidase 2	NM_003773|HYAL2|8692|hyaluronoglucosaminidase 2	NM_033158|HYAL2|8692|hyaluronoglucosaminidase 2
hg19_v1_chr11_+_43665772_43665796	0.188777	SOX2.p2	
hg19_v1_chr5_-_121414011_121414059	0.188249	SOX2.p2	NM_002317|LOX|4015|lysyl oxidase
hg19_v1_chr6_+_3259134_3259183	0.187957	SOX2.p2	NM_001128591|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4	NM_001128592|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4	NM_001135750|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4
hg19_v1_chr10_+_45496272_45496382	0.187889	SOX2.p2	NM_006963|ZNF22|7570|zinc finger protein 22 (KOX 15)	AK291508|ZNF22|7570|zinc finger protein 22 (KOX 15)	AK312278|ZNF22|7570|zinc finger protein 22 (KOX 15)	BC053687|ZNF22|7570|zinc finger protein 22 (KOX 15)	BC010642|ZNF22|7570|zinc finger protein 22 (KOX 15)
hg19_v1_chr5_+_140588267_140588291	0.187828	SOX2.p2	AK293336|PCDHB12|56124|protocadherin beta 12	AK316160|PCDHB12|56124|protocadherin beta 12	BC045637|PCDHB12|56124|protocadherin beta 12	NM_018932|PCDHB12|56124|protocadherin beta 12
hg19_v1_chr2_+_63277936_63277995	0.187752	SOX2.p2	NM_014562|OTX1|5013|orthodenticle homeobox 1	AK095680|OTX1|5013|orthodenticle homeobox 1	AK297308|OTX1|5013|orthodenticle homeobox 1	BC007621|OTX1|5013|orthodenticle homeobox 1
hg19_v1_chr10_+_24755440_24755448	0.187665	SOX2.p2	AK300422|KIAA1217|56243|KIAA1217
hg19_v1_chr1_-_156051788_156051809	0.187603	SOX2.p2	AY950677|MEX3A|92312|mex-3 homolog A (C. elegans)	NM_001093725|MEX3A|92312|mex-3 homolog A (C. elegans)
hg19_v1_chr5_+_179921423_179921493	0.187311	SOX2.p2	AB033020|CNOT6|57472|CCR4-NOT transcription complex, subunit 6	BC152469|CNOT6|57472|CCR4-NOT transcription complex, subunit 6
hg19_v1_chr6_+_139094656_139094925	0.18702	SOX2.p2	AY167571|CCDC28A|25901|coiled-coil domain containing 28A	NM_015439|CCDC28A|25901|coiled-coil domain containing 28A	BC108717|CCDC28A|25901|coiled-coil domain containing 28A	AK300672|CCDC28A|25901|coiled-coil domain containing 28A	AL050197|CCDC28A|25901|coiled-coil domain containing 28A	AJ420568|CCDC28A|25901|coiled-coil domain containing 28A	BC000758|CCDC28A|25901|coiled-coil domain containing 28A	BC004464|CCDC28A|25901|coiled-coil domain containing 28A	BC080566|CCDC28A|25901|coiled-coil domain containing 28A	BC013019|CCDC28A|25901|coiled-coil domain containing 28A
hg19_v1_chr5_+_43602738_43602941	0.187015	SOX2.p2	AK297558|NNT|23530|nicotinamide nucleotide transhydrogenase	NM_012343|NNT|23530|nicotinamide nucleotide transhydrogenase	AL831822|NNT|23530|nicotinamide nucleotide transhydrogenase	BC064402|NNT|23530|nicotinamide nucleotide transhydrogenase
hg19_v1_chr10_-_13390018_13390061	0.186902	SOX2.p2	AK301568|SEPHS1|22929|selenophosphate synthetase 1	AK309829|SEPHS1|22929|selenophosphate synthetase 1
hg19_v1_chrX_+_99899162_99899303	0.1866	SOX2.p2	NM_014467|SRPX2|27286|sushi-repeat containing protein, X-linked 2	AK075462|SRPX2|27286|sushi-repeat containing protein, X-linked 2	AF060567|SRPX2|27286|sushi-repeat containing protein, X-linked 2	AF393649|SRPX2|27286|sushi-repeat containing protein, X-linked 2
hg19_v1_chr22_-_36236264_36236318	0.186112	SOX2.p2	AY960684|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	CU013159|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	CU013447|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ891720|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ894897|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ894898|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2
hg19_v1_chr16_+_58497548_58497612	0.186046	SOX2.p2	NM_020465|NDRG4|65009|NDRG family member 4
hg19_v1_chr18_+_29171729_29171865	0.185767	SOX2.p2	NM_000371|TTR|7276|transthyretin	AK312051|TTR|7276|transthyretin	BC005310|TTR|7276|transthyretin	BC020791|TTR|7276|transthyretin	D00096|TTR|7276|transthyretin	GU727633|TTR|7276|transthyretin	K02091|TTR|7276|transthyretin	M10605|TTR|7276|transthyretin	X59498|TTR|7276|transthyretin	AF162690|TTR|7276|transthyretin	BT007189|TTR|7276|transthyretin	CR456908|TTR|7276|transthyretin	DQ839490|TTR|7276|transthyretin	U19780|TTR|7276|transthyretin
hg19_v1_chr5_-_172755195_172755329	0.185431	SOX2.p2	AF031036|STC2|8614|stanniocalcin 2	BT019591|STC2|8614|stanniocalcin 2	CR541825|STC2|8614|stanniocalcin 2	EU832632|STC2|8614|stanniocalcin 2	EU832707|STC2|8614|stanniocalcin 2	BC006352|STC2|8614|stanniocalcin 2	BC013958|STC2|8614|stanniocalcin 2	AF055460|STC2|8614|stanniocalcin 2	AB012664|STC2|8614|stanniocalcin 2	AF098462|STC2|8614|stanniocalcin 2
hg19_v1_chr20_-_52199635_52199635	0.18498	SOX2.p2	AF041259|ZNF217|7764|zinc finger protein 217	NM_006526|ZNF217|7764|zinc finger protein 217
hg19_v1_chr7_-_96654128_96654261	0.184693	SOX2.p2	BC006226|DLX5|1749|distal-less homeobox 5	AK023493|DLX5|1749|distal-less homeobox 5	NM_005221|DLX5|1749|distal-less homeobox 5	AK297614|DLX5|1749|distal-less homeobox 5
hg19_v1_chr9_-_97356007_97356074	0.184509	SOX2.p2	CR536483|FBP2|8789|fructose-1,6-bisphosphatase 2	HQ258389|FBP2|8789|fructose-1,6-bisphosphatase 2	BC113632|FBP2|8789|fructose-1,6-bisphosphatase 2	BC117477|FBP2|8789|fructose-1,6-bisphosphatase 2	NM_003837|FBP2|8789|fructose-1,6-bisphosphatase 2	Y10812|FBP2|8789|fructose-1,6-bisphosphatase 2
hg19_v1_chr20_-_20036685_20036689	0.184436	SOX2.p2	BC144222|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AF255443|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AF318303|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AF318304|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AF318305|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	NM_016652|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)
hg19_v1_chr11_+_111807857_111807960	0.183586	SOX2.p2	DQ642016|DIXDC1|85458|DIX domain containing 1	NM_001037954|DIXDC1|85458|DIX domain containing 1
hg19_v1_chr1_-_26324534_26324647	0.182794	SOX2.p2	BC001158|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa	U89386|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa	AK313815|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa	D87845|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa	NM_000437|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa
hg19_v1_chr4_-_53617781_53617806	0.182677	SOX2.p2	NM_001242690|ERVMER34-1|100288413|endogenous retrovirus group MER34, member 1	NM_024534|ERVMER34-1|100288413|endogenous retrovirus group MER34, member 1
hg19_v1_chr22_+_21986968_21987085	0.182648	SOX2.p2	AK302030|CCDC116|164592|coiled-coil domain containing 116	AK093365|CCDC116|164592|coiled-coil domain containing 116	BC033499|CCDC116|164592|coiled-coil domain containing 116	NM_152612|CCDC116|164592|coiled-coil domain containing 116
hg19_v1_chrX_-_15872921_15872937	0.182419	SOX2.p2	AK296135|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	AK299921|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	AK312594|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg19_v1_chr1_+_84630374_84630386	0.182396	SOX2.p2	BX647515|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AB209189|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta
hg19_v1_chrX_+_119384490_119384683	0.182242	SOX2.p2	BC042753|ZBTB33|10009|zinc finger and BTB domain containing 33	NM_006777|ZBTB33|10009|zinc finger and BTB domain containing 33	NM_001184742|ZBTB33|10009|zinc finger and BTB domain containing 33	BX538016|ZBTB33|10009|zinc finger and BTB domain containing 33	AL833604|ZBTB33|10009|zinc finger and BTB domain containing 33	AK312321|ZBTB33|10009|zinc finger and BTB domain containing 33	BX538101|ZBTB33|10009|zinc finger and BTB domain containing 33
hg19_v1_chr5_-_121413906_121413961	0.182217	SOX2.p2	S78694|LOX|4015|lysyl oxidase	AF039291|LOX|4015|lysyl oxidase	AK297709|LOX|4015|lysyl oxidase	AK298781|LOX|4015|lysyl oxidase
hg19_v1_chr4_+_184580419_184580480	0.181809	SOX2.p2	NM_021942|C4orf41|60684|chromosome 4 open reading frame 41	NM_199053|C4orf41|60684|chromosome 4 open reading frame 41	AL833571|C4orf41|60684|chromosome 4 open reading frame 41	AK096345|C4orf41|60684|chromosome 4 open reading frame 41	BX648499|C4orf41|60684|chromosome 4 open reading frame 41	BX647127|C4orf41|60684|chromosome 4 open reading frame 41	BX538044|C4orf41|60684|chromosome 4 open reading frame 41	BC040530|C4orf41|60684|chromosome 4 open reading frame 41	BC051724|C4orf41|60684|chromosome 4 open reading frame 41
hg19_v1_chr11_-_66115016_66115166	0.181449	SOX2.p2	DQ892706|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	DQ895957|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK075354|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK098779|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK225182|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK294604|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	BC021965|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK293715|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AF029893|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK098389|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	NM_006876|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1
hg19_v1_chr8_+_92082423_92082605	0.181442	SOX2.p2	NM_016023|OTUD6B|51633|OTU domain containing 6B	BX647772|OTUD6B|51633|OTU domain containing 6B	AK293843|OTUD6B|51633|OTU domain containing 6B	BC029760|OTUD6B|51633|OTU domain containing 6B	AK310823|OTUD6B|51633|OTU domain containing 6B	AK291646|OTUD6B|51633|OTU domain containing 6B	AF151836|OTUD6B|51633|OTU domain containing 6B
hg19_v1_chr15_-_73051650_73051778	0.180938	SOX2.p2	
hg19_v1_chr7_+_134464417_134464428	0.18082	SOX2.p2	BC040354|CALD1|800|caldesmon 1
hg19_v1_chr1_-_58716173_58716192	0.180464	SOX2.p2	CR933698|DAB1|1600|disabled homolog 1 (Drosophila)	AB210012|DAB1|1600|disabled homolog 1 (Drosophila)
hg19_v1_chr8_-_17942410_17942507	0.180313	SOX2.p2	AK025732|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1	BC016828|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1	NM_001127505|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1	NM_004315|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1
hg19_v1_chr12_-_90049818_90049884	0.180249	SOX2.p2	J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1
hg19_v1_chr8_-_125716430_125716434	0.18017	SOX2.p2	U50573|MTSS1|9788|metastasis suppressor 1
hg19_v1_chr10_+_97515408_97515672	0.179923	SOX2.p2	NM_001164178|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164181|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AK301459|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AK298648|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AK098278|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164179|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164182|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164183|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001776|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1
hg19_v1_chrX_+_106161589_106161589	0.17989	SOX2.p2	AK312515|CLDN2|9075|claudin 2	NM_001171095|CLDN2|9075|claudin 2
hg19_v1_chr4_+_41258941_41259010	0.179838	SOX2.p2	AK054579|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	AK315368|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC006305|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC005117|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	DQ891998|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	DQ895188|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	AB209038|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	X04741|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
hg19_v1_chr1_+_244998914_244998966	0.179477	SOX2.p2	AK130498|FAM36A|116228|family with sequence similarity 36, member A	BC062419|FAM36A|116228|family with sequence similarity 36, member A	BC018519|FAM36A|116228|family with sequence similarity 36, member A
hg19_v1_chr10_+_114709963_114710641	0.179301	SOX2.p2	AK225809|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146274|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146283|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146284|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146285|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146286|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198525|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198526|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198527|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198528|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198529|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198530|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198531|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_030756|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010174|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	Y11306|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	AK315243|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010168|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010169|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010172|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010166|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010167|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010170|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	BC032656|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010171|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	AK299295|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	AB440195|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	AB451266|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	CR536574|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352838|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352839|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352840|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352841|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352842|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352843|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352844|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352845|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352846|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352847|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352848|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352849|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352850|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352851|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	BX648364|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)
hg19_v1_chr5_-_171710794_171710837	0.179109	SOX2.p2	NM_152277|UBTD2|92181|ubiquitin domain containing 2
hg19_v1_chr20_+_30795699_30795763	0.178607	SOX2.p2	AL832023|POFUT1|23509|protein O-fucosyltransferase 1
hg19_v1_chr1_-_202612580_202612580	0.178532	SOX2.p2	AK094430|SYT2|127833|synaptotagmin II	NM_001136504|SYT2|127833|synaptotagmin II
hg19_v1_chr17_+_28705981_28705998	0.178477	SOX2.p2	U65090|CPD|1362|carboxypeptidase D
hg19_v1_chr7_+_117120016_117120061	0.178324	SOX2.p2	M28668|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)	NM_000492|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)	BC143713|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)
hg19_v1_chr4_+_39408472_39408496	0.178093	SOX2.p2	AB079373|KLB|152831|klotho beta	NM_175737|KLB|152831|klotho beta
hg19_v1_chr4_-_70505359_70505359	0.178093	SOX2.p2	FJ664272|UGT2A2|574537|UDP glucuronosyltransferase 2 family, polypeptide A2	FJ664273|UGT2A2|574537|UDP glucuronosyltransferase 2 family, polypeptide A2	NM_001105677|UGT2A2|574537|UDP glucuronosyltransferase 2 family, polypeptide A2
hg19_v1_chr1_-_115259433_115259514	0.177983	SOX2.p2	NM_002524|NRAS|4893|neuroblastoma RAS viral (v-ras) oncogene homolog
hg19_v1_chr13_-_48987247_48987263	0.177414	SOX2.p2	BX537445|LPAR6|10161|lysophosphatidic acid receptor 6	AK123059|LPAR6|10161|lysophosphatidic acid receptor 6	BX537392|LPAR6|10161|lysophosphatidic acid receptor 6	BX537438|LPAR6|10161|lysophosphatidic acid receptor 6	BX647109|LPAR6|10161|lysophosphatidic acid receptor 6
hg19_v1_chr7_-_50628744_50628774	0.177185	SOX2.p2	AJ310724|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	BC000485|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	BC008366|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	M76180|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	AK298321|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	NM_000790|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	NM_001242886|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	NM_001242887|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	NM_001242888|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	NM_001242889|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	NM_001242890|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)
hg19_v1_chrX_+_70503512_70503532	0.176962	SOX2.p2	BC028299|NONO|4841|non-POU domain containing, octamer-binding	BC012141|NONO|4841|non-POU domain containing, octamer-binding	BC025352|NONO|4841|non-POU domain containing, octamer-binding	BC025280|NONO|4841|non-POU domain containing, octamer-binding	BC002364|NONO|4841|non-POU domain containing, octamer-binding
hg19_v1_chr5_+_70944968_70945006	0.176831	SOX2.p2	AK025591|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)
hg19_v1_chr15_+_66585822_66585977	0.176629	SOX2.p2	NM_001143688|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	AK095407|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like
hg19_v1_chr19_+_4402658_4402775	0.176134	SOX2.p2	BC067093|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	NM_005483|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC052620|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC041606|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	U20979|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC005813|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC011560|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)
hg19_v1_chr20_-_21378046_21378182	0.176014	SOX2.p2	NM_033176|NKX2-4|644524|NK2 homeobox 4
hg19_v1_chr2_+_203500211_203500263	0.175948	SOX2.p2	AB053315|FAM117B|150864|family with sequence similarity 117, member B
hg19_v1_chr2_+_181845368_181845372	0.175748	SOX2.p2	BC092407|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3
hg19_v1_chr7_+_5632453_5632567	0.175599	SOX2.p2	BC006304|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC007948|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	U03057|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	U09873|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC000521|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC007539|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC007988|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	DQ891402|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	DQ894580|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BT006636|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)
hg19_v1_chr13_+_49684388_49684524	0.175525	SOX2.p2	AK302415|FNDC3A|22862|fibronectin type III domain containing 3A	AJ749707|FNDC3A|22862|fibronectin type III domain containing 3A	NM_014923|FNDC3A|22862|fibronectin type III domain containing 3A	AB023187|FNDC3A|22862|fibronectin type III domain containing 3A	BC107793|FNDC3A|22862|fibronectin type III domain containing 3A
hg19_v1_chr3_-_10547267_10547271	0.175435	SOX2.p2	AK308898|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2	NM_001001331|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2	NM_001683|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2
hg19_v1_chr5_-_36876730_36876797	0.175358	SOX2.p2	AK000901|LOC646719|646719|uncharacterized LOC646719
hg19_v1_chr16_+_15528324_15528477	0.17481	SOX2.p2	AK057180|C16orf45|89927|chromosome 16 open reading frame 45	NM_033201|C16orf45|89927|chromosome 16 open reading frame 45	AK293431|C16orf45|89927|chromosome 16 open reading frame 45	BC008967|C16orf45|89927|chromosome 16 open reading frame 45
hg19_v1_chrX_+_21958714_21958938	0.17466	SOX2.p2	NM_004595|SMS|6611|spermine synthase	AD001528|SMS|6611|spermine synthase	AK293455|SMS|6611|spermine synthase	AK313834|SMS|6611|spermine synthase	BC009898|SMS|6611|spermine synthase	BC085621|SMS|6611|spermine synthase	EU176347|SMS|6611|spermine synthase
hg19_v1_chr3_+_114012832_114012875	0.174434	SOX2.p2	EU675310|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains	NM_173799|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains	AK097192|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains	BC101288|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains	BC101289|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains	BC101290|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains	BC101291|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains
hg19_v1_chr6_-_52628272_52628360	0.174412	SOX2.p2	AK292602|GSTA2|2939|glutathione S-transferase alpha 2	AK313601|GSTA2|2939|glutathione S-transferase alpha 2	M16594|GSTA2|2939|glutathione S-transferase alpha 2	BC002895|GSTA2|2939|glutathione S-transferase alpha 2	NM_000846|GSTA2|2939|glutathione S-transferase alpha 2
hg19_v1_chr4_-_40516567_40516601	0.174302	SOX2.p2	BX648404|RBM47|54502|RNA binding motif protein 47	AF262323|RBM47|54502|RNA binding motif protein 47
hg19_v1_chr3_-_148939784_148939831	0.173507	SOX2.p2	BC070304|CP|1356|ceruloplasmin (ferroxidase)	NM_000096|CP|1356|ceruloplasmin (ferroxidase)
hg19_v1_chr1_-_182360400_182360677	0.173473	SOX2.p2	NM_001033056|GLUL|2752|glutamate-ammonia ligase
hg19_v1_chr14_+_64971504_64971542	0.173317	SOX2.p2	AK291743|ZBTB1|22890|zinc finger and BTB domain containing 1
hg19_v1_chr17_+_57642885_57643089	0.173091	SOX2.p2	AF461690|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	NM_001166301|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	NM_024612|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	BC024187|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK299151|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK095681|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AF260270|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK226048|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	DQ890909|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	DQ894060|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40
hg19_v1_chr12_+_50479033_50479194	0.173023	SOX2.p2	AK292700|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	AK293932|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	AK130517|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	EU447009|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	BC000063|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	AF109733|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
hg19_v1_chr20_-_49547451_49547996	0.173003	SOX2.p2	AF250860|ADNP|23394|activity-dependent neuroprotector homeobox	NM_015339|ADNP|23394|activity-dependent neuroprotector homeobox	NM_181442|ADNP|23394|activity-dependent neuroprotector homeobox	BC075794|ADNP|23394|activity-dependent neuroprotector homeobox
hg19_v1_chr2_-_72374919_72374965	0.172921	SOX2.p2	AF252297|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	AK294814|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	BC069443|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	BC109205|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	FJ467289|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	NM_019885|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	AK313433|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1
hg19_v1_chr22_-_31742329_31742340	0.172788	SOX2.p2	BC051357|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1
hg19_v1_chr6_-_150057659_150057707	0.172755	SOX2.p2	AK023349|NUP43|348995|nucleoporin 43kDa
hg19_v1_chr1_-_205719309_205719316	0.172685	SOX2.p2	
hg19_v1_chr17_+_61851512_61851532	0.172482	SOX2.p2	
hg19_v1_chr19_+_44455379_44455396	0.172391	SOX2.p2	AK314207|ZNF221|7638|zinc finger protein 221	AF187987|ZNF221|7638|zinc finger protein 221	NM_013359|ZNF221|7638|zinc finger protein 221
hg19_v1_chr19_-_38720330_38720338	0.172102	SOX2.p2	AK297581|DPF1|8193|D4, zinc and double PHD fingers family 1
hg19_v1_chr7_+_73498149_73498162	0.172087	SOX2.p2	D26309|LIMK1|3984|LIM domain kinase 1
hg19_v1_chr11_+_10829561_10829642	0.172008	SOX2.p2	AK055888|LOC144017|144017|uncharacterized LOC144017
hg19_v1_chr12_-_103311380_103311380	0.171858	SOX2.p2	L47726|PAH|5053|phenylalanine hydroxylase	NM_000277|PAH|5053|phenylalanine hydroxylase	U49897|PAH|5053|phenylalanine hydroxylase
hg19_v1_chr16_+_68344868_68345050	0.171658	SOX2.p2	NM_001184824|PRMT7|54496|protein arginine methyltransferase 7	NM_019023|PRMT7|54496|protein arginine methyltransferase 7	AK001502|PRMT7|54496|protein arginine methyltransferase 7	AK304605|PRMT7|54496|protein arginine methyltransferase 7	AK056647|PRMT7|54496|protein arginine methyltransferase 7
hg19_v1_chr16_-_19533285_19533468	0.171649	SOX2.p2	AY463154|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC014981|GDE1|51573|glycerophosphodiester phosphodiesterase 1	AF306698|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC025273|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC001538|GDE1|51573|glycerophosphodiester phosphodiesterase 1	AF212862|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC012153|GDE1|51573|glycerophosphodiester phosphodiesterase 1	AK312912|GDE1|51573|glycerophosphodiester phosphodiesterase 1	NM_016641|GDE1|51573|glycerophosphodiester phosphodiesterase 1
hg19_v1_chr1_+_84630014_84630064	0.17144	SOX2.p2	AK296482|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AK304375|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	CR936631|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242857|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242858|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242859|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta
hg19_v1_chr2_+_122407564_122407726	0.170581	SOX2.p2	BC047384|LOC254128|254128|uncharacterized LOC254128	BC036624|LOC254128|254128|uncharacterized LOC254128	AK098264|LOC254128|254128|uncharacterized LOC254128
hg19_v1_chr17_+_68071386_68071475	0.170258	SOX2.p2	BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v1_chr21_+_27107731_27107801	0.17006	SOX2.p2	U13044|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa
hg19_v1_chr12_+_7282963_7283286	0.169959	SOX2.p2	AK316059|CLSTN3|9746|calsyntenin 3	NM_014718|CLSTN3|9746|calsyntenin 3	AJ277460|CLSTN3|9746|calsyntenin 3	BC111491|CLSTN3|9746|calsyntenin 3	AK299177|CLSTN3|9746|calsyntenin 3	BC104767|CLSTN3|9746|calsyntenin 3	BC112283|CLSTN3|9746|calsyntenin 3	BC148258|CLSTN3|9746|calsyntenin 3
hg19_v1_chr7_-_99698278_99698385	0.169452	SOX2.p2	AK055379|MCM7|4176|minichromosome maintenance complex component 7	NM_182776|MCM7|4176|minichromosome maintenance complex component 7
hg19_v1_chr2_-_133427624_133427783	0.169336	SOX2.p2	AY358628|LYPD1|116372|LY6/PLAUR domain containing 1	BC017318|LYPD1|116372|LY6/PLAUR domain containing 1	AK309849|LYPD1|116372|LY6/PLAUR domain containing 1	AK075487|LYPD1|116372|LY6/PLAUR domain containing 1	AK130005|LYPD1|116372|LY6/PLAUR domain containing 1	AK094501|LYPD1|116372|LY6/PLAUR domain containing 1	AK123029|LYPD1|116372|LY6/PLAUR domain containing 1
hg19_v1_chr5_+_53813494_53813596	0.16875	SOX2.p2	AK304195|SNX18|112574|sorting nexin 18	NM_001145427|SNX18|112574|sorting nexin 18	BC060791|SNX18|112574|sorting nexin 18	BC067860|SNX18|112574|sorting nexin 18	NM_001102575|SNX18|112574|sorting nexin 18	NM_052870|SNX18|112574|sorting nexin 18
hg19_v1_chr20_-_48530275_48530275	0.16858	SOX2.p2	AK289644|SPATA2|9825|spermatogenesis associated 2	NM_001135773|SPATA2|9825|spermatogenesis associated 2
hg19_v1_chr10_-_30316338_30316525	0.168574	SOX2.p2	BC047548|KIAA1462|57608|KIAA1462
hg19_v1_chr5_-_78281688_78281765	0.168284	SOX2.p2	BC029051|ARSB|411|arylsulfatase B	NM_198709|ARSB|411|arylsulfatase B
hg19_v1_chr16_+_67063214_67063363	0.168117	SOX2.p2	AK290462|CBFB|865|core-binding factor, beta subunit	AK291834|CBFB|865|core-binding factor, beta subunit	AF294326|CBFB|865|core-binding factor, beta subunit	BT006862|CBFB|865|core-binding factor, beta subunit	DQ890558|CBFB|865|core-binding factor, beta subunit	DQ893719|CBFB|865|core-binding factor, beta subunit	L20298|CBFB|865|core-binding factor, beta subunit	AK311724|CBFB|865|core-binding factor, beta subunit
hg19_v1_chr18_+_657674_657748	0.16769	SOX2.p2	BC002567|TYMS|7298|thymidylate synthetase	BC018858|TYMS|7298|thymidylate synthetase	AK292620|TYMS|7298|thymidylate synthetase	DQ892149|TYMS|7298|thymidylate synthetase	AB077207|TYMS|7298|thymidylate synthetase	AB077208|TYMS|7298|thymidylate synthetase	BT006811|TYMS|7298|thymidylate synthetase
hg19_v1_chr1_+_10490158_10490158	0.167651	SOX2.p2	AF521016|APITD1-CORT|100526739|APITD1-CORT readthrough	NM_198544|APITD1-CORT|100526739|APITD1-CORT readthrough	NM_199006|APITD1-CORT|100526739|APITD1-CORT readthrough	NM_199294|APITD1|378708|apoptosis-inducing, TAF9-like domain 1
hg19_v1_chr7_-_102283237_102283315	0.167533	SOX2.p2	EU341824|UPK3BL|100134938|uroplakin 3B-like	NM_001114403|UPK3BL|100134938|uroplakin 3B-like
hg19_v1_chr3_-_167813175_167813688	0.167439	SOX2.p2	AK307718|GOLIM4|27333|golgi integral membrane protein 4	AK307557|GOLIM4|27333|golgi integral membrane protein 4	NM_014498|GOLIM4|27333|golgi integral membrane protein 4
hg19_v1_chrX_-_32430370_32430370	0.167246	SOX2.p2	NM_004011|DMD|1756|dystrophin	NM_004012|DMD|1756|dystrophin
hg19_v1_chr2_+_203776930_203777116	0.167108	SOX2.p2	BC021999|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AL834188|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	NM_001104586|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AY032876|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK310640|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK308171|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK022737|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK295499|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK299366|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK304014|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK316432|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AK295703|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	AB053310|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8	NM_024744|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8
hg19_v1_chr19_+_1269244_1269366	0.167106	SOX2.p2	NM_001280|CIRBP|1153|cold inducible RNA binding protein	AK095781|CIRBP|1153|cold inducible RNA binding protein	AK304185|CIRBP|1153|cold inducible RNA binding protein	AK304470|CIRBP|1153|cold inducible RNA binding protein	AK311601|CIRBP|1153|cold inducible RNA binding protein	AK128423|CIRBP|1153|cold inducible RNA binding protein	AF021336|CIRBP|1153|cold inducible RNA binding protein	AK094781|CIRBP|1153|cold inducible RNA binding protein	D78134|CIRBP|1153|cold inducible RNA binding protein	BC000901|CIRBP|1153|cold inducible RNA binding protein	BC000403|CIRBP|1153|cold inducible RNA binding protein
hg19_v1_chrX_+_102965836_102965836	0.167098	SOX2.p2	AK130867|TMEM31|203562|transmembrane protein 31	BC029575|TMEM31|203562|transmembrane protein 31	NM_182541|TMEM31|203562|transmembrane protein 31
hg19_v1_chr2_+_211342405_211342432	0.167049	SOX2.p2	NM_001122633|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB208800|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial
hg19_v1_chr7_+_55433396_55433748	0.166867	SOX2.p2	AK313326|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	BC070049|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AK225958|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AJ278245|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AB035966|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AF353942|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AK301747|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AL713665|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)
hg19_v1_chr5_+_15500539_15500549	0.166574	SOX2.p2	BC136424|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg19_v1_chr22_+_31003069_31003317	0.166366	SOX2.p2	NM_000355|TCN2|6948|transcobalamin II	NM_001184726|TCN2|6948|transcobalamin II	AK313711|TCN2|6948|transcobalamin II	BC011239|TCN2|6948|transcobalamin II	BC001176|TCN2|6948|transcobalamin II	L02647|TCN2|6948|transcobalamin II	L02648|TCN2|6948|transcobalamin II	AK225445|TCN2|6948|transcobalamin II	CR456591|TCN2|6948|transcobalamin II	M60396|TCN2|6948|transcobalamin II	CU013191|TCN2|6948|transcobalamin II	CU013479|TCN2|6948|transcobalamin II	DQ892811|TCN2|6948|transcobalamin II	DQ896057|TCN2|6948|transcobalamin II
hg19_v1_chr3_-_10547340_10547352	0.166351	SOX2.p2	AB210008|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2
hg19_v1_chr11_-_18062304_18062334	0.166297	SOX2.p2	AY196345|TPH1|7166|tryptophan hydroxylase 1	BC106739|TPH1|7166|tryptophan hydroxylase 1	BC106740|TPH1|7166|tryptophan hydroxylase 1	X52836|TPH1|7166|tryptophan hydroxylase 1	NM_004179|TPH1|7166|tryptophan hydroxylase 1
hg19_v1_chr1_+_161129288_161129402	0.166114	SOX2.p2	BC090946|USP21|27005|ubiquitin specific peptidase 21	AK292319|USP21|27005|ubiquitin specific peptidase 21	AK310326|USP21|27005|ubiquitin specific peptidase 21	AF233442|USP21|27005|ubiquitin specific peptidase 21	AF217979|USP21|27005|ubiquitin specific peptidase 21	AF177758|USP21|27005|ubiquitin specific peptidase 21
hg19_v1_chrX_+_135579670_135579843	0.166049	SOX2.p2	BC009896|HTATSF1|27336|HIV-1 Tat specific factor 1	NM_014500|HTATSF1|27336|HIV-1 Tat specific factor 1	AK299403|HTATSF1|27336|HIV-1 Tat specific factor 1	AK225870|HTATSF1|27336|HIV-1 Tat specific factor 1	U76992|HTATSF1|27336|HIV-1 Tat specific factor 1	EU176345|HTATSF1|27336|HIV-1 Tat specific factor 1	BT006886|HTATSF1|27336|HIV-1 Tat specific factor 1
hg19_v1_chr10_+_111765725_111765838	0.165893	SOX2.p2	NM_019903|ADD3|120|adducin 3 (gamma)	AB209810|ADD3|120|adducin 3 (gamma)	BC057285|ADD3|120|adducin 3 (gamma)
hg19_v1_chr21_+_45177862_45178006	0.16579	SOX2.p2	AL110184|PDXK|8566|pyridoxal (pyridoxine, vitamin B6) kinase
hg19_v1_chr12_-_95945226_95945262	0.16571	SOX2.p2	AL136825|USP44|84101|ubiquitin specific peptidase 44	NM_032147|USP44|84101|ubiquitin specific peptidase 44
hg19_v1_chr16_+_56815703_56815767	0.165424	SOX2.p2	NM_001242795|NUP93|9688|nucleoporin 93kDa	AK056637|NUP93|9688|nucleoporin 93kDa
hg19_v1_chr1_-_46152183_46152301	0.165365	SOX2.p2	BC068578|GPBP1L1|60313|GC-rich promoter binding protein 1-like 1	NM_021639|GPBP1L1|60313|GC-rich promoter binding protein 1-like 1
hg19_v1_chr1_+_40713572_40713639	0.165095	SOX2.p2	NM_001008740|TMCO2|127391|transmembrane and coiled-coil domains 2	BC108666|TMCO2|127391|transmembrane and coiled-coil domains 2
hg19_v1_chr1_-_47695442_47695442	0.164836	SOX2.p2	M61108|TAL1|6886|T-cell acute lymphocytic leukemia 1	NM_003189|TAL1|6886|T-cell acute lymphocytic leukemia 1
hg19_v1_chr11_+_118889427_118889482	0.164704	SOX2.p2	AF161520|TRAPPC4|51399|trafficking protein particle complex 4	AK025623|TRAPPC4|51399|trafficking protein particle complex 4	AK290520|TRAPPC4|51399|trafficking protein particle complex 4	AK293914|TRAPPC4|51399|trafficking protein particle complex 4	AK293977|TRAPPC4|51399|trafficking protein particle complex 4	AK297422|TRAPPC4|51399|trafficking protein particle complex 4	BC010866|TRAPPC4|51399|trafficking protein particle complex 4
hg19_v1_chrX_-_106960028_106960230	0.164585	SOX2.p2	CR533450|TSC22D3|1831|TSC22 domain family, member 3	EU831656|TSC22D3|1831|TSC22 domain family, member 3	EU831739|TSC22D3|1831|TSC22 domain family, member 3	AK311834|TSC22D3|1831|TSC22 domain family, member 3	AY007119|TSC22D3|1831|TSC22 domain family, member 3	AK127938|TSC22D3|1831|TSC22 domain family, member 3
hg19_v1_chr6_+_39760772_39760865	0.16442	SOX2.p2	NM_015345|DAAM2|23500|dishevelled associated activator of morphogenesis 2	AL833083|DAAM2|23500|dishevelled associated activator of morphogenesis 2	BC128388|DAAM2|23500|dishevelled associated activator of morphogenesis 2
hg19_v1_chrX_+_46937744_46937774	0.164273	SOX2.p2	AK223360|RGN|9104|regucalcin (senescence marker protein-30)	NM_004683|RGN|9104|regucalcin (senescence marker protein-30)	NM_152869|RGN|9104|regucalcin (senescence marker protein-30)
hg19_v1_chr2_+_155555092_155555287	0.164218	SOX2.p2	NM_002239|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	U50964|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	AK293824|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	BC022495|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	GU068048|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	GU074515|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	DQ892363|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	DQ895572|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3
hg19_v1_chr1_+_38261079_38261159	0.16394	SOX2.p2	AK301399|MANEAL|149175|mannosidase, endo-alpha-like	AK055996|MANEAL|149175|mannosidase, endo-alpha-like	NM_152496|MANEAL|149175|mannosidase, endo-alpha-like
hg19_v1_chrX_+_46937807_46937868	0.163713	SOX2.p2	BC050371|RGN|9104|regucalcin (senescence marker protein-30)	BC058880|RGN|9104|regucalcin (senescence marker protein-30)	AK290136|RGN|9104|regucalcin (senescence marker protein-30)
hg19_v1_chr3_+_171561138_171561158	0.163553	SOX2.p2	NM_001164436|TMEM212|389177|transmembrane protein 212	AK026825|TMEM212|389177|transmembrane protein 212
hg19_v1_chr4_-_5890142_5890237	0.162896	SOX2.p2	D78012|CRMP1|1400|collapsin response mediator protein 1	AK127754|CRMP1|1400|collapsin response mediator protein 1	BC000252|CRMP1|1400|collapsin response mediator protein 1	BC007613|CRMP1|1400|collapsin response mediator protein 1	AK309379|CRMP1|1400|collapsin response mediator protein 1
hg19_v1_chr3_-_11761946_11762284	0.162578	SOX2.p2	D50911|VGLL4|9686|vestigial like 4 (Drosophila)	BC001514|VGLL4|9686|vestigial like 4 (Drosophila)	AK130542|VGLL4|9686|vestigial like 4 (Drosophila)	BC000763|VGLL4|9686|vestigial like 4 (Drosophila)	BC003038|VGLL4|9686|vestigial like 4 (Drosophila)	NM_014667|VGLL4|9686|vestigial like 4 (Drosophila)
hg19_v1_chr19_+_35417806_35417951	0.162495	SOX2.p2	NM_001099437|ZNF30|90075|zinc finger protein 30	NM_001099438|ZNF30|90075|zinc finger protein 30	NM_194325|ZNF30|90075|zinc finger protein 30	BC142996|ZNF30|90075|zinc finger protein 30	BX640666|ZNF30|90075|zinc finger protein 30	AK295515|ZNF30|90075|zinc finger protein 30	AK290435|ZNF30|90075|zinc finger protein 30
hg19_v1_chr20_+_11898536_11898579	0.162299	SOX2.p2	AK316256|BTBD3|22903|BTB (POZ) domain containing 3	NM_014962|BTBD3|22903|BTB (POZ) domain containing 3	AB023169|BTBD3|22903|BTB (POZ) domain containing 3	BC109315|BTBD3|22903|BTB (POZ) domain containing 3	BC109316|BTBD3|22903|BTB (POZ) domain containing 3
hg19_v1_chr1_+_244998967_244999005	0.162194	SOX2.p2	AK000866|FAM36A|116228|family with sequence similarity 36, member A	BC095486|FAM36A|116228|family with sequence similarity 36, member A	AK300760|FAM36A|116228|family with sequence similarity 36, member A	BC064399|FAM36A|116228|family with sequence similarity 36, member A	AF086182|FAM36A|116228|family with sequence similarity 36, member A
hg19_v1_chr1_+_109419748_109419826	0.162183	SOX2.p2	AK295563|GPSM2|29899|G-protein signaling modulator 2	BC027732|GPSM2|29899|G-protein signaling modulator 2
hg19_v1_chr12_-_81763127_81763192	0.161828	SOX2.p2	AK123372|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	AK296380|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	NM_001220479|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	NM_001220480|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
hg19_v1_chr13_-_48987017_48987244	0.161637	SOX2.p2	AK223389|LPAR6|10161|lysophosphatidic acid receptor 6	BC070295|LPAR6|10161|lysophosphatidic acid receptor 6	BC054346|LPAR6|10161|lysophosphatidic acid receptor 6	BC040850|LPAR6|10161|lysophosphatidic acid receptor 6
hg19_v1_chr1_-_17766142_17766208	0.161502	SOX2.p2	AB040903|RCC2|55920|regulator of chromosome condensation 2
hg19_v1_chr3_+_182971592_182971620	0.16147	SOX2.p2	AK091474|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg19_v1_chr3_-_11685395_11685398	0.161417	SOX2.p2	NM_001128219|VGLL4|9686|vestigial like 4 (Drosophila)
hg19_v1_chr8_-_66753968_66753968	0.161413	SOX2.p2	NM_001242318|PDE7A|5150|phosphodiesterase 7A
hg19_v1_chr3_-_71179736_71179745	0.16119	SOX2.p2	AK297649|FOXP1|27086|forkhead box P1	BX647682|FOXP1|27086|forkhead box P1
hg19_v1_chr6_-_32160637_32160715	0.160984	SOX2.p2	AJ243938|GPSM3|63940|G-protein signaling modulator 3	AK313922|GPSM3|63940|G-protein signaling modulator 3
hg19_v1_chrX_-_100603673_100603749	0.160849	SOX2.p2	U66035|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	BC070284|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	AK312117|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	BC005236|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	BC006994|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	BC015093|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	NM_001145951|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)
hg19_v1_chr11_+_71791376_71791376	0.160752	SOX2.p2	NM_001145307|LRTOMT|220074|leucine rich transmembrane and 0-methyltransferase domain containing	NM_001145308|LRTOMT|220074|leucine rich transmembrane and 0-methyltransferase domain containing	NM_001205138|LRTOMT|220074|leucine rich transmembrane and 0-methyltransferase domain containing	NM_145309|LRTOMT|220074|leucine rich transmembrane and 0-methyltransferase domain containing
hg19_v1_chr12_+_53491417_53491438	0.160744	SOX2.p2	NM_002178|IGFBP6|3489|insulin-like growth factor binding protein 6	BC010162|IGFBP6|3489|insulin-like growth factor binding protein 6
hg19_v1_chr4_+_52709165_52709408	0.160656	SOX2.p2	AK124346|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	NM_001040402|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	NM_015115|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	BC053897|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AK294896|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	BX537944|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AK027051|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	D87466|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	BC041702|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AM392554|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AM392637|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AM392729|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AM393240|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
hg19_v1_chr12_-_50790391_50790404	0.160438	SOX2.p2	BC054024|FAM186A|121006|family with sequence similarity 186, member A	AL833333|FAM186A|121006|family with sequence similarity 186, member A	NM_001145475|FAM186A|121006|family with sequence similarity 186, member A
hg19_v1_chr2_+_211458078_211458092	0.160436	SOX2.p2	AK316425|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	NM_001122634|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AK302778|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AY317138|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial
hg19_v1_chr12_+_56137063_56137182	0.160274	SOX2.p2	NM_005811|GDF11|10220|growth differentiation factor 11	AF100907|GDF11|10220|growth differentiation factor 11	AF028333|GDF11|10220|growth differentiation factor 11
hg19_v1_chr22_-_36236330_36236351	0.160264	SOX2.p2	CR456559|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2
hg19_v1_chr13_-_99959649_99959748	0.159931	SOX2.p2	AK223390|GPR183|1880|G protein-coupled receptor 183	BC020752|GPR183|1880|G protein-coupled receptor 183	AK292091|GPR183|1880|G protein-coupled receptor 183	AK313443|GPR183|1880|G protein-coupled receptor 183	NM_004951|GPR183|1880|G protein-coupled receptor 183
hg19_v1_chr5_+_42565963_42565965	0.15985	SOX2.p2	BC136496|GHR|2690|growth hormone receptor	NM_001242460|GHR|2690|growth hormone receptor	NM_001242461|GHR|2690|growth hormone receptor	NM_001242462|GHR|2690|growth hormone receptor
hg19_v1_chr4_-_147442868_147443124	0.159644	SOX2.p2	AM392861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC146684|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	DQ122860|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	DQ122861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	DQ871036|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	EU831657|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	EU831663|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	EU831740|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	EU831744|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	CR936751|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC120970|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC120971|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC127626|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC127627|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC148252|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK291046|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC063471|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AL136728|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC023288|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AY346324|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC150308|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	CR933647|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	NM_001029998|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	NM_032128|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7
hg19_v1_chr6_-_134498973_134499012	0.159631	SOX2.p2	FM205708|SGK1|6446|serum/glucocorticoid regulated kinase 1	AK293383|SGK1|6446|serum/glucocorticoid regulated kinase 1	NM_001143677|SGK1|6446|serum/glucocorticoid regulated kinase 1
hg19_v1_chr11_+_7618416_7618421	0.159554	SOX2.p2	AK296718|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)
hg19_v1_chr15_+_91260575_91260654	0.15952	SOX2.p2	BC062697|BLM|641|Bloom syndrome, RecQ helicase-like	NM_000057|BLM|641|Bloom syndrome, RecQ helicase-like	U39817|BLM|641|Bloom syndrome, RecQ helicase-like	BC107423|BLM|641|Bloom syndrome, RecQ helicase-like	BC115028|BLM|641|Bloom syndrome, RecQ helicase-like	BC115029|BLM|641|Bloom syndrome, RecQ helicase-like	BC115030|BLM|641|Bloom syndrome, RecQ helicase-like	BC115031|BLM|641|Bloom syndrome, RecQ helicase-like	BC115032|BLM|641|Bloom syndrome, RecQ helicase-like	AK314262|BLM|641|Bloom syndrome, RecQ helicase-like	BC034480|BLM|641|Bloom syndrome, RecQ helicase-like	BC101567|BLM|641|Bloom syndrome, RecQ helicase-like	BC143280|BLM|641|Bloom syndrome, RecQ helicase-like	BC143288|BLM|641|Bloom syndrome, RecQ helicase-like	BC093622|BLM|641|Bloom syndrome, RecQ helicase-like
hg19_v1_chr20_-_10654429_10654710	0.159439	SOX2.p2	BC126205|JAG1|182|jagged 1	BC126207|JAG1|182|jagged 1	AF028593|JAG1|182|jagged 1	U61276|JAG1|182|jagged 1	U73936|JAG1|182|jagged 1	BC098393|JAG1|182|jagged 1	BC028007|JAG1|182|jagged 1	AF003837|JAG1|182|jagged 1	NM_000214|JAG1|182|jagged 1
hg19_v1_chr3_-_184971815_184971885	0.159266	SOX2.p2	BC038948|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	BC110460|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	L07077|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	AK301521|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	AK223460|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	AK291798|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	BC011030|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	BC030982|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	NM_001166415|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	NM_001966|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase
hg19_v1_chr22_+_21271619_21271720	0.158484	SOX2.p2	AK292909|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like	NM_005207|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like	X59656|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
hg19_v1_chr17_+_28705922_28705957	0.158437	SOX2.p2	NM_001304|CPD|1362|carboxypeptidase D	BC051702|CPD|1362|carboxypeptidase D	BC045549|CPD|1362|carboxypeptidase D	BC054116|CPD|1362|carboxypeptidase D
hg19_v1_chr4_+_41540187_41540224	0.158291	SOX2.p2	BC023546|LIMCH1|22998|LIM and calponin homology domains 1
hg19_v1_chr11_+_17757494_17757545	0.158073	SOX2.p2	NM_001112741|KCNC1|3746|potassium voltage-gated channel, Shaw-related subfamily, member 1	NM_004976|KCNC1|3746|potassium voltage-gated channel, Shaw-related subfamily, member 1
hg19_v1_chr18_-_25756946_25757128	0.157963	SOX2.p2	EU832318|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)	EU832403|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)	X54315|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)	BC036470|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)
hg19_v1_chrX_-_18690187_18690222	0.157916	SOX2.p2	AF014459|RS1|6247|retinoschisin 1	DQ426892|RS1|6247|retinoschisin 1	NM_000330|RS1|6247|retinoschisin 1
hg19_v1_chr8_-_74659056_74659079	0.157842	SOX2.p2	Y19062|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AB210014|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AL079285|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK002152|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK126149|LOC729696|729696|uncharacterized LOC729696	AK293496|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK303104|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK314617|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	BC008369|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	BC008370|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)
hg19_v1_chr5_-_172755418_172755468	0.157439	SOX2.p2	AK075406|STC2|8614|stanniocalcin 2	BC000658|STC2|8614|stanniocalcin 2	AK027390|STC2|8614|stanniocalcin 2	AK027663|STC2|8614|stanniocalcin 2
hg19_v1_chr11_+_82783118_82783119	0.157385	SOX2.p2	BC031316|LOC100506233|100506233|uncharacterized LOC100506233
hg19_v1_chr5_+_170847059_170847203	0.157355	SOX2.p2	BC006245|FGF18|8817|fibroblast growth factor 18	AB007422|FGF18|8817|fibroblast growth factor 18	AF211188|FGF18|8817|fibroblast growth factor 18	AM393798|FGF18|8817|fibroblast growth factor 18	BT019570|FGF18|8817|fibroblast growth factor 18	BT019571|FGF18|8817|fibroblast growth factor 18	DQ892736|FGF18|8817|fibroblast growth factor 18	DQ895983|FGF18|8817|fibroblast growth factor 18
hg19_v1_chrX_+_22050920_22051130	0.15698	SOX2.p2	NM_000444|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	U87284|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	AD000712|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	AK298030|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	BC105057|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	BC105059|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	U75645|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	U60475|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked
hg19_v1_chr1_-_204165542_204165620	0.156959	SOX2.p2	AF218017|KISS1|3814|KiSS-1 metastasis-suppressor	BC022819|KISS1|3814|KiSS-1 metastasis-suppressor	AK291695|KISS1|3814|KiSS-1 metastasis-suppressor	NM_002256|KISS1|3814|KiSS-1 metastasis-suppressor
hg19_v1_chr1_-_205719340_205719371	0.156927	SOX2.p2	NM_022731|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg19_v1_chr1_-_31345361_31345435	0.15683	SOX2.p2	AL049426|SDC3|9672|syndecan 3
hg19_v1_chr6_-_139695349_139695498	0.156605	SOX2.p2	NM_001168389|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	NM_001168388|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
hg19_v1_chr20_+_42086533_42086673	0.156105	SOX2.p2	AK291203|SRSF6|6431|serine/arginine-rich splicing factor 6	AK300411|SRSF6|6431|serine/arginine-rich splicing factor 6	AB208976|SRSF6|6431|serine/arginine-rich splicing factor 6	BC006832|SRSF6|6431|serine/arginine-rich splicing factor 6	U30828|SRSF6|6431|serine/arginine-rich splicing factor 6	U30883|SRSF6|6431|serine/arginine-rich splicing factor 6	AB451251|SRSF6|6431|serine/arginine-rich splicing factor 6	AB451375|SRSF6|6431|serine/arginine-rich splicing factor 6
hg19_v1_chr5_+_175792444_175792534	0.155726	SOX2.p2	BC059361|ARL10|285598|ADP-ribosylation factor-like 10	NM_173664|ARL10|285598|ADP-ribosylation factor-like 10
hg19_v1_chr5_+_15500736_15500760	0.155708	SOX2.p2	BC075061|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg19_v1_chr17_+_26698986_26699029	0.155559	SOX2.p2	NM_015077|SARM1|23098|sterile alpha and TIR motif containing 1
hg19_v1_chr19_-_20748540_20748630	0.155181	SOX2.p2	BC015765|ZNF737|100129842|zinc finger protein 737	NM_001159293|ZNF737|100129842|zinc finger protein 737
hg19_v1_chr2_+_208394615_208394671	0.155151	SOX2.p2	NM_004379|CREB1|1385|cAMP responsive element binding protein 1	NM_134442|CREB1|1385|cAMP responsive element binding protein 1	BC095407|CREB1|1385|cAMP responsive element binding protein 1
hg19_v1_chr4_+_55095433_55095495	0.155029	SOX2.p2	AK308353|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	BC015186|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	M21574|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	M30494|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	AK311006|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	AK316578|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	M22734|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	BC063414|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide
hg19_v1_chr14_+_64971417_64971470	0.154871	SOX2.p2	AB023214|ZBTB1|22890|zinc finger and BTB domain containing 1
hg19_v1_chr11_+_46402333_46402617	0.154274	SOX2.p2	AK309963|MDK|4192|midkine (neurite growth-promoting factor 2)	AK308210|MDK|4192|midkine (neurite growth-promoting factor 2)	AK130889|MDK|4192|midkine (neurite growth-promoting factor 2)	NM_001012334|MDK|4192|midkine (neurite growth-promoting factor 2)
hg19_v1_chr15_-_37393364_37393521	0.1541	SOX2.p2	BC050431|MEIS2|4212|Meis homeobox 2	NM_001220482|MEIS2|4212|Meis homeobox 2	NM_002399|MEIS2|4212|Meis homeobox 2	BC001516|MEIS2|4212|Meis homeobox 2	BC001844|MEIS2|4212|Meis homeobox 2	BC007202|MEIS2|4212|Meis homeobox 2	AK300247|MEIS2|4212|Meis homeobox 2
hg19_v1_chr4_+_47487230_47487431	0.153918	SOX2.p2	BC057839|ATP10D|57205|ATPase, class V, type 10D	AJ441078|ATP10D|57205|ATPase, class V, type 10D	NM_020453|ATP10D|57205|ATPase, class V, type 10D	BC131535|ATP10D|57205|ATPase, class V, type 10D
hg19_v1_chr20_-_39766522_39766695	0.153699	SOX2.p2	
hg19_v1_chr17_+_42299282_42299409	0.153313	SOX2.p2	
hg19_v1_chrX_+_119384685_119384696	0.152952	SOX2.p2	
hg19_v1_chr6_-_123957941_123958237	0.152941	SOX2.p2	U18985|TRDN|10345|triadin	BC139910|TRDN|10345|triadin	AK291867|TRDN|10345|triadin	BC012590|TRDN|10345|triadin	BC029393|TRDN|10345|triadin	BC057222|TRDN|10345|triadin	BC070290|TRDN|10345|triadin	AJ489257|TRDN|10345|triadin	AK307619|TRDN|10345|triadin	NM_001251987|TRDN|10345|triadin	NM_006073|TRDN|10345|triadin
hg19_v1_chr4_+_57774365_57774509	0.152895	SOX2.p2	BC132859|REST|5978|RE1-silencing transcription factor	BC136491|REST|5978|RE1-silencing transcription factor
hg19_v1_chr21_-_43299407_43299590	0.152612	SOX2.p2	AB051812|PRDM15|63977|PR domain containing 15	AB051813|PRDM15|63977|PR domain containing 15	AB051814|PRDM15|63977|PR domain containing 15	AB051815|PRDM15|63977|PR domain containing 15	NM_001040424|PRDM15|63977|PR domain containing 15	AF276513|PRDM15|63977|PR domain containing 15	AY078498|PRDM15|63977|PR domain containing 15	NM_022115|PRDM15|63977|PR domain containing 15
hg19_v1_chr13_+_93879011_93879844	0.152585	SOX2.p2	NM_005708|GPC6|10082|glypican 6	AF105267|GPC6|10082|glypican 6	AY358462|GPC6|10082|glypican 6	BC106947|GPC6|10082|glypican 6	AK304338|GPC6|10082|glypican 6	AK130013|GPC6|10082|glypican 6	AK290144|GPC6|10082|glypican 6	AK074741|GPC6|10082|glypican 6
hg19_v1_chr16_-_72206023_72206063	0.152272	SOX2.p2	AL136795|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	AK315004|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	BC028423|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	AK093285|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	NM_031293|PMFBP1|83449|polyamine modulated factor 1 binding protein 1
hg19_v1_chr7_-_47621741_47621825	0.151833	SOX2.p2	AK092864|TNS3|64759|tensin 3	NM_022748|TNS3|64759|tensin 3
hg19_v1_chr12_+_56360547_56360632	0.15183	SOX2.p2	NM_001798|CDK2|1017|cyclin-dependent kinase 2	NM_052827|CDK2|1017|cyclin-dependent kinase 2	M68520|CDK2|1017|cyclin-dependent kinase 2	AK293246|CDK2|1017|cyclin-dependent kinase 2	AK291941|CDK2|1017|cyclin-dependent kinase 2	X62071|CDK2|1017|cyclin-dependent kinase 2	BC003065|CDK2|1017|cyclin-dependent kinase 2
hg19_v1_chr1_-_205719273_205719308	0.151717	SOX2.p2	BC000805|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AB049824|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AK300416|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg19_v1_chr5_+_133861685_133861926	0.151355	SOX2.p2	D87076|PHF15|23338|PHD finger protein 15	NM_015288|PHF15|23338|PHD finger protein 15	AK290471|PHF15|23338|PHD finger protein 15
hg19_v1_chr2_+_132480063_132480063	0.151175	SOX2.p2	AF038169|C2orf27A|29798|chromosome 2 open reading frame 27A	NM_013310|C2orf27A|29798|chromosome 2 open reading frame 27A
hg19_v1_chr16_+_4845265_4845378	0.151139	SOX2.p2	NM_001253793|LOC440335|440335|uncharacterized LOC440335	NM_001253794|LOC440335|440335|uncharacterized LOC440335
hg19_v1_chr18_+_657633_657663	0.151116	SOX2.p2	AB062290|TYMS|7298|thymidylate synthetase	AK314140|TYMS|7298|thymidylate synthetase	X02308|TYMS|7298|thymidylate synthetase
hg19_v1_chr10_-_115933884_115933981	0.150913	SOX2.p2	BC100670|C10orf118|55088|chromosome 10 open reading frame 118	BC103499|C10orf118|55088|chromosome 10 open reading frame 118	BC103504|C10orf118|55088|chromosome 10 open reading frame 118	BC105632|C10orf118|55088|chromosome 10 open reading frame 118	BC152306|C10orf118|55088|chromosome 10 open reading frame 118	BC107430|C10orf118|55088|chromosome 10 open reading frame 118	BC070368|C10orf118|55088|chromosome 10 open reading frame 118	BX537964|C10orf118|55088|chromosome 10 open reading frame 118	AK307517|C10orf118|55088|chromosome 10 open reading frame 118	AK092620|C10orf118|55088|chromosome 10 open reading frame 118	BC020842|C10orf118|55088|chromosome 10 open reading frame 118	BC030557|C10orf118|55088|chromosome 10 open reading frame 118
hg19_v1_chr3_+_185080835_185081029	0.150784	SOX2.p2	NM_004721|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13	AK296961|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13	AB001872|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13	BC111726|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13
hg19_v1_chr19_-_21950322_21950429	0.150759	SOX2.p2	BC035579|ZNF100|163227|zinc finger protein 100	AK308798|ZNF100|163227|zinc finger protein 100	AK126551|ZNF100|163227|zinc finger protein 100	NM_173531|ZNF100|163227|zinc finger protein 100
hg19_v1_chr1_-_52520768_52520888	0.150721	SOX2.p2	BC008953|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	AK075409|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	BC001493|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	BC008913|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	AY358982|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	AF131758|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)
hg19_v1_chr2_+_202047620_202047620	0.150573	SOX2.p2	NM_001206524|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	NM_001206542|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	NM_001230|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	NM_032974|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	NM_032976|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	NM_032977|CASP10|843|caspase 10, apoptosis-related cysteine peptidase
hg19_v1_chr7_-_50518021_50518087	0.150179	SOX2.p2	BC051867|FIGNL1|63979|fidgetin-like 1	AK308136|FIGNL1|63979|fidgetin-like 1	AK023142|FIGNL1|63979|fidgetin-like 1	AK027537|FIGNL1|63979|fidgetin-like 1	NM_001042762|FIGNL1|63979|fidgetin-like 1	NM_022116|FIGNL1|63979|fidgetin-like 1
hg19_v1_chr8_+_59323822_59323948	0.150103	SOX2.p2	BC113645|UBXN2B|137886|UBX domain protein 2B	NM_001077619|UBXN2B|137886|UBX domain protein 2B	AK126300|UBXN2B|137886|UBX domain protein 2B	HQ258392|UBXN2B|137886|UBX domain protein 2B	AL831990|UBXN2B|137886|UBX domain protein 2B	AL833075|UBXN2B|137886|UBX domain protein 2B	BX647876|UBXN2B|137886|UBX domain protein 2B
hg19_v1_chr1_+_100315806_100316044	0.149931	SOX2.p2	BC078663|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	NM_000028|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	NM_000643|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	NM_000644|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84008|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84009|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84010|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
hg19_v1_chr14_+_77228940_77229164	0.149859	SOX2.p2	BC051896|VASH1|22846|vasohibin 1	AK291377|VASH1|22846|vasohibin 1
hg19_v1_chr1_-_43424536_43424608	0.149824	SOX2.p2	AK292791|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	AK293306|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	AK296736|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	AK312403|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	AB208987|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1
hg19_v1_chr8_-_105479147_105479284	0.149715	SOX2.p2	BC034395|DPYS|1807|dihydropyrimidinase	D78011|DPYS|1807|dihydropyrimidinase	NM_001385|DPYS|1807|dihydropyrimidinase
hg19_v1_chr10_+_101088794_101088855	0.149535	SOX2.p2	NM_020348|CNNM1|26507|cyclin M1
hg19_v1_chr7_+_128095881_128096051	0.149194	SOX2.p2	NM_001098786|HILPDA|29923|hypoxia inducible lipid droplet-associated	NM_013332|HILPDA|29923|hypoxia inducible lipid droplet-associated	AF144755|HILPDA|29923|hypoxia inducible lipid droplet-associated	AK024729|HILPDA|29923|hypoxia inducible lipid droplet-associated	AK222583|HILPDA|29923|hypoxia inducible lipid droplet-associated	BC008573|HILPDA|29923|hypoxia inducible lipid droplet-associated	BC001863|HILPDA|29923|hypoxia inducible lipid droplet-associated	BC093742|HILPDA|29923|hypoxia inducible lipid droplet-associated	BC112183|HILPDA|29923|hypoxia inducible lipid droplet-associated
hg19_v1_chr5_-_118324223_118324253	0.149008	SOX2.p2	BC114508|DTWD2|285605|DTW domain containing 2	BC114955|DTWD2|285605|DTW domain containing 2	AK091296|DTWD2|285605|DTW domain containing 2	NM_173666|DTWD2|285605|DTW domain containing 2
hg19_v1_chr1_+_180897572_180897590	0.148929	SOX2.p2	
hg19_v1_chr9_-_14086901_14087003	0.14884	SOX2.p2	BX537698|NFIB|4781|nuclear factor I/B
hg19_v1_chr17_-_13972715_13972810	0.148315	SOX2.p2	
hg19_v1_chr1_+_183774214_183774368	0.148236	SOX2.p2	AK311716|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AF186779|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AB023176|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK304293|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	BC039250|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK311701|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1
hg19_v1_chr3_-_10547221_10547245	0.148212	SOX2.p2	M97260|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2
hg19_v1_chr6_-_105850765_105850927	0.148199	SOX2.p2	AB020018|PREP|5550|prolyl endopeptidase	AY660966|PREP|5550|prolyl endopeptidase	D21102|PREP|5550|prolyl endopeptidase	X74496|PREP|5550|prolyl endopeptidase	AB028867|PREP|5550|prolyl endopeptidase	DQ893427|PREP|5550|prolyl endopeptidase	DQ896742|PREP|5550|prolyl endopeptidase
hg19_v1_chr5_-_141338626_141338626	0.148055	SOX2.p2	AF240635|PCDH12|51294|protocadherin 12	NM_016580|PCDH12|51294|protocadherin 12
hg19_v1_chr4_-_83483099_83483130	0.147842	SOX2.p2	AK301116|TMEM150C|441027|transmembrane protein 150C	BC147019|TMEM150C|441027|transmembrane protein 150C	BC147027|TMEM150C|441027|transmembrane protein 150C	NM_001080506|TMEM150C|441027|transmembrane protein 150C	AK297512|TMEM150C|441027|transmembrane protein 150C
hg19_v1_chr18_-_29264394_29264685	0.147815	SOX2.p2	AB024742|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC074835|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC074884|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC069620|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC069642|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AF069054|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AK314860|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AF097159|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	NM_004775|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6
hg19_v1_chr5_+_162930230_162930347	0.147729	SOX2.p2	DQ395260|MAT2B|27430|methionine adenosyltransferase II, beta	DQ413183|MAT2B|27430|methionine adenosyltransferase II, beta	NM_182796|MAT2B|27430|methionine adenosyltransferase II, beta	AJ243721|MAT2B|27430|methionine adenosyltransferase II, beta	AK291919|MAT2B|27430|methionine adenosyltransferase II, beta	BC005218|MAT2B|27430|methionine adenosyltransferase II, beta	AY358695|MAT2B|27430|methionine adenosyltransferase II, beta
hg19_v1_chr17_+_16945766_16946162	0.147708	SOX2.p2	NM_015134|MPRIP|23164|myosin phosphatase Rho interacting protein	NM_201274|MPRIP|23164|myosin phosphatase Rho interacting protein	BC136479|MPRIP|23164|myosin phosphatase Rho interacting protein	AB098507|MPRIP|23164|myosin phosphatase Rho interacting protein	AB189741|MPRIP|23164|myosin phosphatase Rho interacting protein	AY296247|MPRIP|23164|myosin phosphatase Rho interacting protein
hg19_v1_chr3_-_126327397_126327397	0.146833	SOX2.p2	AB113648|TXNRD3NB|645840|thioredoxin reductase 3 neighbor	NM_001039783|TXNRD3NB|645840|thioredoxin reductase 3 neighbor
hg19_v1_chr7_-_107880492_107880613	0.146644	SOX2.p2	AJ001057|NRCAM|4897|neuronal cell adhesion molecule	NM_001037132|NRCAM|4897|neuronal cell adhesion molecule
hg19_v1_chr14_-_24553817_24553843	0.146591	SOX2.p2	M95925|NRL|4901|neural retina leucine zipper	M81840|NRL|4901|neural retina leucine zipper	NM_006177|NRL|4901|neural retina leucine zipper	BC012395|NRL|4901|neural retina leucine zipper	AB593104|NRL|4901|neural retina leucine zipper	AB593106|NRL|4901|neural retina leucine zipper	AB593102|NRL|4901|neural retina leucine zipper
hg19_v1_chrX_-_134185978_134186280	0.146513	SOX2.p2	BC008096|FAM127B|26071|family with sequence similarity 127, member B	BC071991|FAM127B|26071|family with sequence similarity 127, member B	AL117556|FAM127B|26071|family with sequence similarity 127, member B	BC000393|FAM127B|26071|family with sequence similarity 127, member B	BC019300|FAM127B|26071|family with sequence similarity 127, member B	NM_001078172|FAM127B|26071|family with sequence similarity 127, member B	NM_001134321|FAM127B|26071|family with sequence similarity 127, member B
hg19_v1_chr5_+_140797270_140797426	0.146279	SOX2.p2	AF152336|PCDHGB7|56099|protocadherin gamma subfamily B, 7	AF152523|PCDHGB7|56099|protocadherin gamma subfamily B, 7
hg19_v1_chr1_-_117664349_117664410	0.146243	SOX2.p2	AK023243|TRIM45|80263|tripartite motif containing 45	AK222901|TRIM45|80263|tripartite motif containing 45	BC034943|TRIM45|80263|tripartite motif containing 45	AY669488|TRIM45|80263|tripartite motif containing 45	NM_001145635|TRIM45|80263|tripartite motif containing 45	NM_025188|TRIM45|80263|tripartite motif containing 45
hg19_v1_chr11_-_92930978_92930997	0.146131	SOX2.p2	
hg19_v1_chr8_+_17433941_17433941	0.145966	SOX2.p2	AK289450|PDGFRL|5157|platelet-derived growth factor receptor-like	NM_006207|PDGFRL|5157|platelet-derived growth factor receptor-like
hg19_v1_chr11_-_10879365_10879672	0.14566	SOX2.p2	AK123233|ZBED5|58486|zinc finger, BED-type containing 5	AK315033|ZBED5|58486|zinc finger, BED-type containing 5	BC047754|ZBED5|58486|zinc finger, BED-type containing 5	AF205600|ZBED5|58486|zinc finger, BED-type containing 5	BC017803|ZBED5|58486|zinc finger, BED-type containing 5	BC038508|ZBED5|58486|zinc finger, BED-type containing 5	NM_001143667|ZBED5|58486|zinc finger, BED-type containing 5	NM_021211|ZBED5|58486|zinc finger, BED-type containing 5
hg19_v1_chr5_-_78809658_78809699	0.145458	SOX2.p2	BC047438|HOMER1|9456|homer homolog 1 (Drosophila)	NM_004272|HOMER1|9456|homer homolog 1 (Drosophila)
hg19_v1_chr12_-_25055228_25055321	0.145445	SOX2.p2	CR749308|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	BC033864|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	NM_001178094|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic
hg19_v1_chr8_+_61429494_61429494	0.145348	SOX2.p2	AK297576|RAB2A|5862|RAB2A, member RAS oncogene family
hg19_v1_chr5_-_78282356_78282356	0.145343	SOX2.p2	NM_000046|ARSB|411|arylsulfatase B
hg19_v1_chr3_+_44771097_44771123	0.145252	SOX2.p2	AK316574|ZNF501|115560|zinc finger protein 501	AK054613|ZNF501|115560|zinc finger protein 501	AK297216|ZNF501|115560|zinc finger protein 501	BC013762|ZNF501|115560|zinc finger protein 501	NM_145044|ZNF501|115560|zinc finger protein 501
hg19_v1_chr7_+_23145916_23145916	0.145219	SOX2.p2	NM_018846|KLHL7|55975|kelch-like 7 (Drosophila)
hg19_v1_chr6_-_26199439_26199520	0.145138	SOX2.p2	BC031333|HIST1H3D|8351|histone cluster 1, H3d	NM_003530|HIST1H3D|8351|histone cluster 1, H3d	BC128035|HIST1H2AD|3013|histone cluster 1, H2ad	CR541970|HIST1H2AD|3013|histone cluster 1, H2ad	CR541999|HIST1H2AD|3013|histone cluster 1, H2ad	EU446963|HIST1H2AD|3013|histone cluster 1, H2ad	NM_021065|HIST1H2AD|3013|histone cluster 1, H2ad	BC093807|HIST1H2AD|3013|histone cluster 1, H2ad	BC093809|HIST1H2AD|3013|histone cluster 1, H2ad	AK312127|HIST1H2AD|3013|histone cluster 1, H2ad	AK316611|HIST1H3D|8351|histone cluster 1, H3d
hg19_v1_chr1_+_185014449_185014558	0.144945	SOX2.p2	NM_007212|RNF2|6045|ring finger protein 2	AF141327|RNF2|6045|ring finger protein 2
hg19_v1_chr20_-_10654139_10654269	0.144881	SOX2.p2	U77720|JAG1|182|jagged 1	HQ258535|JAG1|182|jagged 1	AK312722|JAG1|182|jagged 1
hg19_v1_chr8_-_38325241_38325362	0.144579	SOX2.p2	AK291754|FGFR1|2260|fibroblast growth factor receptor 1	AK309947|FGFR1|2260|fibroblast growth factor receptor 1	AK292470|FGFR1|2260|fibroblast growth factor receptor 1	NM_001174065|FGFR1|2260|fibroblast growth factor receptor 1	NM_001174066|FGFR1|2260|fibroblast growth factor receptor 1	NM_001174067|FGFR1|2260|fibroblast growth factor receptor 1
hg19_v1_chr14_+_37667148_37667292	0.144321	SOX2.p2	BC035870|MIPOL1|145282|mirror-image polydactyly 1	BX537396|MIPOL1|145282|mirror-image polydactyly 1	AK291850|MIPOL1|145282|mirror-image polydactyly 1	BC036523|MIPOL1|145282|mirror-image polydactyly 1	BC036124|MIPOL1|145282|mirror-image polydactyly 1	BX647795|MIPOL1|145282|mirror-image polydactyly 1	AY059470|MIPOL1|145282|mirror-image polydactyly 1
hg19_v1_chr1_+_90098624_90098642	0.143857	SOX2.p2	BC036122|LRRC8C|84230|leucine rich repeat containing 8 family, member C
hg19_v1_chr8_-_103137134_103137134	0.143784	SOX2.p2	NM_001040630|NCALD|83988|neurocalcin delta
hg19_v1_chr9_+_108424737_108424777	0.143745	SOX2.p2	BC126373|TAL2|6887|T-cell acute lymphocytic leukemia 2	BC126375|TAL2|6887|T-cell acute lymphocytic leukemia 2	NM_005421|TAL2|6887|T-cell acute lymphocytic leukemia 2	HQ258056|TAL2|6887|T-cell acute lymphocytic leukemia 2	BC069422|TAL2|6887|T-cell acute lymphocytic leukemia 2
hg19_v1_chr19_+_7580987_7581103	0.143452	SOX2.p2	NM_018083|ZNF358|140467|zinc finger protein 358
hg19_v1_chrX_+_100354797_100354797	0.143409	SOX2.p2	NM_006733|CENPI|2491|centromere protein I	X97249|CENPI|2491|centromere protein I
hg19_v1_chr1_-_31712733_31712737	0.143306	SOX2.p2	NM_024522|NKAIN1|79570|Na+/K+ transporting ATPase interacting 1
hg19_v1_chr11_-_6913730_6913829	0.143154	SOX2.p2	NM_003700|OR2D2|120776|olfactory receptor, family 2, subfamily D, member 2	BC140729|OR2D2|120776|olfactory receptor, family 2, subfamily D, member 2
hg19_v1_chr16_+_24788568_24788680	0.142811	SOX2.p2	AY035864|TNRC6A|27327|trinucleotide repeat containing 6A
hg19_v1_chr12_+_109535922_109536131	0.142704	SOX2.p2	NM_003362|UNG|7374|uracil-DNA glycosylase	CR749342|UNG|7374|uracil-DNA glycosylase	AK299416|UNG|7374|uracil-DNA glycosylase	AK291341|UNG|7374|uracil-DNA glycosylase	X15653|UNG|7374|uracil-DNA glycosylase	BC050634|UNG|7374|uracil-DNA glycosylase	BC015205|UNG|7374|uracil-DNA glycosylase	CR541673|UNG|7374|uracil-DNA glycosylase	GQ129388|UNG|7374|uracil-DNA glycosylase	GQ129389|UNG|7374|uracil-DNA glycosylase
hg19_v1_chr15_-_73925555_73925617	0.142692	SOX2.p2	HQ258139|NPTN|27020|neuroplastin	BC117462|NPTN|27020|neuroplastin	BC143880|NPTN|27020|neuroplastin	BC143881|NPTN|27020|neuroplastin	AK313441|NPTN|27020|neuroplastin	AK314248|NPTN|27020|neuroplastin	BC030773|NPTN|27020|neuroplastin	CR936779|NPTN|27020|neuroplastin	AK304478|NPTN|27020|neuroplastin	AK297184|NPTN|27020|neuroplastin
hg19_v1_chr1_-_58716207_58716212	0.142454	SOX2.p2	AK095513|DAB1|1600|disabled homolog 1 (Drosophila)	NM_021080|DAB1|1600|disabled homolog 1 (Drosophila)
hg19_v1_chr8_-_17580024_17580083	0.142311	SOX2.p2	AK294860|MTUS1|57509|microtubule associated tumor suppressor 1	NM_001166393|MTUS1|57509|microtubule associated tumor suppressor 1
hg19_v1_chr14_+_74035762_74035788	0.14225	SOX2.p2	AK001939|ACOT2|10965|acyl-CoA thioesterase 2	DQ082755|ACOT2|10965|acyl-CoA thioesterase 2	AK223635|ACOT2|10965|acyl-CoA thioesterase 2	NM_006821|ACOT2|10965|acyl-CoA thioesterase 2	BC006335|ACOT2|10965|acyl-CoA thioesterase 2
hg19_v1_chr17_+_61851557_61851584	0.142087	SOX2.p2	NM_007372|DDX42|11325|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	NM_203499|DDX42|11325|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	BC093081|DDX42|11325|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42
hg19_v1_chr12_-_57400199_57400304	0.141857	SOX2.p2	BC140890|ZBTB39|9880|zinc finger and BTB domain containing 39	BC146867|ZBTB39|9880|zinc finger and BTB domain containing 39	AB002350|ZBTB39|9880|zinc finger and BTB domain containing 39	BC152461|ZBTB39|9880|zinc finger and BTB domain containing 39	AK292468|ZBTB39|9880|zinc finger and BTB domain containing 39	NM_014830|ZBTB39|9880|zinc finger and BTB domain containing 39
hg19_v1_chr3_+_185303961_185304206	0.141664	SOX2.p2	AK304402|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AF151697|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	NM_021627|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AK296772|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AK027599|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AK296744|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	BC040609|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AL834380|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2
hg19_v1_chr19_+_56166418_56166470	0.141469	SOX2.p2	X64044|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2	AB451261|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2	AB451387|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2
hg19_v1_chr1_-_154155685_154155695	0.141023	SOX2.p2	AK308007|TPM3|7170|tropomyosin 3
hg19_v1_chr2_-_106810781_106810830	0.140991	SOX2.p2	NM_025076|UXS1|80146|UDP-glucuronate decarboxylase 1
hg19_v1_chr1_+_50574589_50574594	0.140961	SOX2.p2	NM_001144774|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_021952|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg19_v1_chr17_-_4269610_4269812	0.140956	SOX2.p2	BT007416|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1	D78514|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1	BC026288|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1
hg19_v1_chr15_+_66585632_66585659	0.140926	SOX2.p2	NM_133375|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	AK295392|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	BC022089|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like
hg19_v1_chr11_-_5959848_5959971	0.140669	SOX2.p2	BC020770|TRIM5|85363|tripartite motif containing 5
hg19_v1_chr10_+_91461333_91461418	0.140432	SOX2.p2	AK290439|KIF20B|9585|kinesin family member 20B	NM_016195|KIF20B|9585|kinesin family member 20B	AY282406|KIF20B|9585|kinesin family member 20B	BC012585|KIF20B|9585|kinesin family member 20B	BC108688|KIF20B|9585|kinesin family member 20B	BC058913|KIF20B|9585|kinesin family member 20B	AL117496|KIF20B|9585|kinesin family member 20B	BC093089|KIF20B|9585|kinesin family member 20B	AB033337|KIF20B|9585|kinesin family member 20B	BC046134|KIF20B|9585|kinesin family member 20B	BC042130|KIF20B|9585|kinesin family member 20B	AK074336|KIF20B|9585|kinesin family member 20B
hg19_v1_chr12_+_16500528_16500711	0.140234	SOX2.p2	NM_020300|MGST1|4257|microsomal glutathione S-transferase 1	AK291148|MGST1|4257|microsomal glutathione S-transferase 1	AK309707|MGST1|4257|microsomal glutathione S-transferase 1	BC005923|MGST1|4257|microsomal glutathione S-transferase 1	BC056863|MGST1|4257|microsomal glutathione S-transferase 1	NM_145791|MGST1|4257|microsomal glutathione S-transferase 1
hg19_v1_chr5_-_38595506_38595506	0.139828	SOX2.p2	AK308158|LIFR|3977|leukemia inhibitory factor receptor alpha	AK309882|LIFR|3977|leukemia inhibitory factor receptor alpha	NM_002310|LIFR|3977|leukemia inhibitory factor receptor alpha
hg19_v1_chr3_-_155421996_155421996	0.139794	SOX2.p2	BC113950|PLCH1|23007|phospholipase C, eta 1	NM_014996|PLCH1|23007|phospholipase C, eta 1
hg19_v1_chr17_-_8079607_8079713	0.139636	SOX2.p2	BC006292|TMEM107|84314|transmembrane protein 107	AK315666|TMEM107|84314|transmembrane protein 107	AK027813|TMEM107|84314|transmembrane protein 107	BC119730|TMEM107|84314|transmembrane protein 107	BC119731|TMEM107|84314|transmembrane protein 107	BC127649|TMEM107|84314|transmembrane protein 107	BC127650|TMEM107|84314|transmembrane protein 107	AY358525|TMEM107|84314|transmembrane protein 107	BC070231|TMEM107|84314|transmembrane protein 107	NM_032354|TMEM107|84314|transmembrane protein 107	NM_183065|TMEM107|84314|transmembrane protein 107
hg19_v1_chr2_+_102314162_102314542	0.139599	SOX2.p2	NM_001242560|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	NM_004834|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	NM_145686|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	BC064691|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AK296396|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AF096300|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	NM_001242559|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	NM_145687|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AY212247|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AY834276|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4
hg19_v1_chr8_-_17270800_17270859	0.139526	SOX2.p2	AK294468|MTMR7|9108|myotubularin related protein 7	HQ258354|MTMR7|9108|myotubularin related protein 7	HQ258491|MTMR7|9108|myotubularin related protein 7	BC130577|MTMR7|9108|myotubularin related protein 7	BC130579|MTMR7|9108|myotubularin related protein 7	CR749240|MTMR7|9108|myotubularin related protein 7	AK316022|MTMR7|9108|myotubularin related protein 7	AK316283|MTMR7|9108|myotubularin related protein 7
hg19_v1_chr1_-_167522979_167523003	0.13932	SOX2.p2	DQ891131|CREG1|8804|cellular repressor of E1A-stimulated genes 1	DQ894310|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AY359071|CREG1|8804|cellular repressor of E1A-stimulated genes 1	BC006786|CREG1|8804|cellular repressor of E1A-stimulated genes 1	BC008628|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AK130006|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AK315497|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AK075375|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AK095456|CREG1|8804|cellular repressor of E1A-stimulated genes 1	AF084523|CREG1|8804|cellular repressor of E1A-stimulated genes 1
hg19_v1_chr1_-_154155594_154155633	0.139297	SOX2.p2	AF474157|TPM3|7170|tropomyosin 3	AY004867|TPM3|7170|tropomyosin 3	AK125367|TPM3|7170|tropomyosin 3
hg19_v1_chr7_+_43152196_43152257	0.139077	SOX2.p2	AB002320|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	BC151227|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	NM_015052|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	AK294918|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1
hg19_v1_chr19_-_36909463_36909579	0.139057	SOX2.p2	AK315709|ZFP82|284406|zinc finger protein 82 homolog (mouse)	GU388429|ZFP82|284406|zinc finger protein 82 homolog (mouse)	AL834267|ZFP82|284406|zinc finger protein 82 homolog (mouse)	NM_133466|ZFP82|284406|zinc finger protein 82 homolog (mouse)	AK074942|ZFP82|284406|zinc finger protein 82 homolog (mouse)
hg19_v1_chr1_-_200992510_200992598	0.138917	SOX2.p2	AM177180|KIF21B|23046|kinesin family member 21B	BC137281|KIF21B|23046|kinesin family member 21B	BC144557|KIF21B|23046|kinesin family member 21B
hg19_v1_chr9_-_86536283_86536495	0.138877	SOX2.p2	AK297689|KIF27|55582|kinesin family member 27	BC140788|KIF27|55582|kinesin family member 27	AY237536|KIF27|55582|kinesin family member 27	AY237537|KIF27|55582|kinesin family member 27	AY237538|KIF27|55582|kinesin family member 27	NM_017576|KIF27|55582|kinesin family member 27
hg19_v1_chr5_-_60458146_60458210	0.138793	SOX2.p2	BC146876|C5orf43|643155|chromosome 5 open reading frame 43	BC146881|C5orf43|643155|chromosome 5 open reading frame 43	BC014242|C5orf43|643155|chromosome 5 open reading frame 43	BC047489|C5orf43|643155|chromosome 5 open reading frame 43
hg19_v1_chr6_+_34204928_34204935	0.138465	SOX2.p2	M23614|HMGA1|3159|high mobility group AT-hook 1	M23615|HMGA1|3159|high mobility group AT-hook 1
hg19_v1_chr1_-_216978708_216978708	0.138464	SOX2.p2	AY388461|ESRRG|2104|estrogen-related receptor gamma	NM_001243514|ESRRG|2104|estrogen-related receptor gamma
hg19_v1_chr10_+_104263726_104263913	0.138315	SOX2.p2	AK312319|SUFU|51684|suppressor of fused homolog (Drosophila)	BC013291|SUFU|51684|suppressor of fused homolog (Drosophila)	AF175770|SUFU|51684|suppressor of fused homolog (Drosophila)	AF144231|SUFU|51684|suppressor of fused homolog (Drosophila)	AF159447|SUFU|51684|suppressor of fused homolog (Drosophila)	AY358550|SUFU|51684|suppressor of fused homolog (Drosophila)	AF222345|SUFU|51684|suppressor of fused homolog (Drosophila)	DQ892586|SUFU|51684|suppressor of fused homolog (Drosophila)	DQ895804|SUFU|51684|suppressor of fused homolog (Drosophila)	AF172319|SUFU|51684|suppressor of fused homolog (Drosophila)
hg19_v1_chr22_+_32149936_32149960	0.138221	SOX2.p2	NM_001242897|DEPDC5|9681|DEP domain containing 5
hg19_v1_chr9_+_124461365_124461648	0.138155	SOX2.p2	AF367051|DAB2IP|153090|DAB2 interacting protein
hg19_v1_chr10_+_97471535_97471535	0.138111	SOX2.p2	AJ133133|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AJ133134|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001098175|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1
hg19_v1_chr12_+_98909414_98909470	0.13807	SOX2.p2	AK315221|TMPO|7112|thymopoietin	U09086|TMPO|7112|thymopoietin	S76736|TMPO|7112|thymopoietin
hg19_v1_chr6_-_151712644_151712777	0.137973	SOX2.p2	BC020172|ZBTB2|57621|zinc finger and BTB domain containing 2	NM_020861|ZBTB2|57621|zinc finger and BTB domain containing 2	AK092886|ZBTB2|57621|zinc finger and BTB domain containing 2	AK291942|ZBTB2|57621|zinc finger and BTB domain containing 2
hg19_v1_chr15_+_22892683_22892695	0.137932	SOX2.p2	NM_014608|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg19_v1_chr20_+_31367637_31367657	0.137909	SOX2.p2	AF176228|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta	NM_175850|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta
hg19_v1_chr1_+_87794576_87794787	0.13789	SOX2.p2	BC017673|LMO4|8543|LIM domain only 4	BC003600|LMO4|8543|LIM domain only 4
hg19_v1_chr6_+_125474800_125475079	0.137799	SOX2.p2	NM_001003396|TPD52L1|7164|tumor protein D52-like 1	NM_001003397|TPD52L1|7164|tumor protein D52-like 1	NM_003287|TPD52L1|7164|tumor protein D52-like 1	AK291866|TPD52L1|7164|tumor protein D52-like 1	U44427|TPD52L1|7164|tumor protein D52-like 1	BC002375|TPD52L1|7164|tumor protein D52-like 1	AK291872|TPD52L1|7164|tumor protein D52-like 1	AF208012|TPD52L1|7164|tumor protein D52-like 1	AK291887|TPD52L1|7164|tumor protein D52-like 1
hg19_v1_chr5_-_41510627_41510729	0.137694	SOX2.p2	AK127142|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3	BX648329|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3	NM_001005473|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3
hg19_v1_chr7_-_150721551_150721585	0.137185	SOX2.p2	BC128587|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)	AK096734|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)	AY515311|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)	NM_173681|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)
hg19_v1_chr8_-_87520981_87521011	0.136982	SOX2.p2	NM_016033|FAM82B|51115|family with sequence similarity 82, member B
hg19_v1_chr5_+_176560023_176560037	0.13688	SOX2.p2	AK126591|NSD1|64324|nuclear receptor binding SET domain protein 1
hg19_v1_chr5_+_140566655_140566893	0.136653	SOX2.p2	AF152502|PCDHB9|56127|protocadherin beta 9	AF217749|PCDHB9|56127|protocadherin beta 9	BC100672|PCDHB9|56127|protocadherin beta 9	BC105636|PCDHB9|56127|protocadherin beta 9	BC105640|PCDHB9|56127|protocadherin beta 9	NM_019119|PCDHB9|56127|protocadherin beta 9	BC103494|PCDHB9|56127|protocadherin beta 9
hg19_v1_chr17_-_38083762_38083902	0.136438	SOX2.p2	AF373101|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	BC071833|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	AX775843|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	AK075212|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	BC017087|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	AF395708|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	AF373102|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	AK074811|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	NM_139280|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)
hg19_v1_chr11_+_62432778_62432812	0.136234	SOX2.p2	NM_001043229|METTL12|751071|methyltransferase like 12	AK297138|METTL12|751071|methyltransferase like 12	BC041359|METTL12|751071|methyltransferase like 12
hg19_v1_chr5_+_90676131_90676193	0.136211	SOX2.p2	BC043415|LOC100129716|100129716|uncharacterized LOC100129716
hg19_v1_chr1_-_168698412_168698447	0.136076	SOX2.p2	DQ892055|DPT|1805|dermatopontin	DQ895249|DPT|1805|dermatopontin	Z22865|DPT|1805|dermatopontin	BC033736|DPT|1805|dermatopontin	NM_001937|DPT|1805|dermatopontin
hg19_v1_chr6_-_105850976_105851014	0.136068	SOX2.p2	AK314195|PREP|5550|prolyl endopeptidase	NM_002726|PREP|5550|prolyl endopeptidase
hg19_v1_chr1_-_43424324_43424520	0.135996	SOX2.p2	BC118590|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	BC121804|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	K03195|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1
hg19_v1_chr12_-_102224509_102224663	0.135865	SOX2.p2	AK056137|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC131787|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC071687|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	AY687932|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC002779|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC094884|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	AM085438|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	NM_024312|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
hg19_v1_chr2_-_106810735_106810755	0.135242	SOX2.p2	BC009819|UXS1|80146|UDP-glucuronate decarboxylase 1	AY147934|UXS1|80146|UDP-glucuronate decarboxylase 1	AY358541|UXS1|80146|UDP-glucuronate decarboxylase 1	AK290668|UXS1|80146|UDP-glucuronate decarboxylase 1	AK304872|UXS1|80146|UDP-glucuronate decarboxylase 1
hg19_v1_chr17_+_42634598_42635055	0.13507	SOX2.p2	NM_001466|FZD2|2535|frizzled family receptor 2	BC052266|FZD2|2535|frizzled family receptor 2	L37882|FZD2|2535|frizzled family receptor 2	BC113402|FZD2|2535|frizzled family receptor 2	BC113404|FZD2|2535|frizzled family receptor 2	AB017364|FZD2|2535|frizzled family receptor 2
hg19_v1_chr12_+_95611514_95611874	0.134972	SOX2.p2	NM_017599|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK001338|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK225303|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK309943|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK225356|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC014443|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK307864|VEZT|55591|vezatin, adherens junctions transmembrane protein	AL137497|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC064939|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC028597|VEZT|55591|vezatin, adherens junctions transmembrane protein
hg19_v1_chr4_+_83351765_83351814	0.134709	SOX2.p2	AK022656|ENOPH1|58478|enolase-phosphatase 1	BC065815|ENOPH1|58478|enolase-phosphatase 1	BC001317|ENOPH1|58478|enolase-phosphatase 1
hg19_v1_chr4_+_41258895_41258897	0.134593	SOX2.p2	NM_004181|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
hg19_v1_chr6_-_10694837_10694838	0.134528	SOX2.p2	BC016820|C6orf52|347744|chromosome 6 open reading frame 52	NM_001145020|C6orf52|347744|chromosome 6 open reading frame 52
hg19_v1_chr16_-_8962842_8962878	0.134319	SOX2.p2	BC108283|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	BC000782|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	AK093698|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	AK311777|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	NM_014316|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	BC003366|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa
hg19_v1_chr19_+_56111600_56111751	0.13428	SOX2.p2	NM_153219|ZNF524|147807|zinc finger protein 524	BC067748|ZNF524|147807|zinc finger protein 524
hg19_v1_chr3_-_71179715_71179732	0.134061	SOX2.p2	AK027264|FOXP1|27086|forkhead box P1
hg19_v1_chr1_-_153606567_153606567	0.133872	SOX2.p2	NM_001024210|S100A13|6284|S100 calcium binding protein A13
hg19_v1_chr12_+_112204711_112204786	0.13382	SOX2.p2	AY621070|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	BC002967|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	X05409|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	AK223373|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	AK301375|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	Y00109|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	AK314856|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	BC071839|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	CR456991|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)
hg19_v1_chr22_+_21271721_21271722	0.133802	SOX2.p2	BC026248|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
hg19_v1_chr16_+_67063035_67063059	0.133599	SOX2.p2	BC018509|CBFB|865|core-binding factor, beta subunit	NM_001755|CBFB|865|core-binding factor, beta subunit	NM_022845|CBFB|865|core-binding factor, beta subunit
hg19_v1_chr20_+_30795574_30795696	0.133492	SOX2.p2	AK291033|POFUT1|23509|protein O-fucosyltransferase 1	AF375884|POFUT1|23509|protein O-fucosyltransferase 1	AK300810|POFUT1|23509|protein O-fucosyltransferase 1	AK303068|POFUT1|23509|protein O-fucosyltransferase 1	BC000582|POFUT1|23509|protein O-fucosyltransferase 1	NM_015352|POFUT1|23509|protein O-fucosyltransferase 1	NM_172236|POFUT1|23509|protein O-fucosyltransferase 1
hg19_v1_chr15_-_99789585_99789827	0.133105	SOX2.p2	BC015728|TTC23|64927|tetratricopeptide repeat domain 23	AF411456|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040655|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040656|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040657|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040658|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040659|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040660|TTC23|64927|tetratricopeptide repeat domain 23	NM_022905|TTC23|64927|tetratricopeptide repeat domain 23
hg19_v1_chr14_-_22005035_22005336	0.13296	SOX2.p2	AK293574|SALL2|6297|sal-like 2 (Drosophila)	AK001276|SALL2|6297|sal-like 2 (Drosophila)	BC136528|SALL2|6297|sal-like 2 (Drosophila)	BC136529|SALL2|6297|sal-like 2 (Drosophila)	AK299931|SALL2|6297|sal-like 2 (Drosophila)	X98834|SALL2|6297|sal-like 2 (Drosophila)	AB002358|SALL2|6297|sal-like 2 (Drosophila)	NM_005407|SALL2|6297|sal-like 2 (Drosophila)
hg19_v1_chr7_-_23053732_23053769	0.132621	SOX2.p2	BC018710|FAM126A|84668|family with sequence similarity 126, member A	NM_032581|FAM126A|84668|family with sequence similarity 126, member A
hg19_v1_chr1_-_17764989_17765032	0.132604	SOX2.p2	BC042141|RCC2|55920|regulator of chromosome condensation 2
hg19_v1_chr11_-_119234859_119234906	0.132519	SOX2.p2	AF440755|USP2|9099|ubiquitin specific peptidase 2	NM_171997|USP2|9099|ubiquitin specific peptidase 2
hg19_v1_chr1_+_53480573_53480613	0.132482	SOX2.p2	M55421|SCP2|6342|sterol carrier protein 2	NM_001007099|SCP2|6342|sterol carrier protein 2	NM_001007100|SCP2|6342|sterol carrier protein 2	NM_001007250|SCP2|6342|sterol carrier protein 2	S52450|SCP2|6342|sterol carrier protein 2
hg19_v1_chr20_+_30795698_30795698	0.132393	SOX2.p2	D80002|POFUT1|23509|protein O-fucosyltransferase 1
hg19_v1_chr1_-_154155646_154155657	0.132367	SOX2.p2	X04588|TPM3|7170|tropomyosin 3	BC072428|TPM3|7170|tropomyosin 3	BC017195|TPM3|7170|tropomyosin 3	AK056921|TPM3|7170|tropomyosin 3
hg19_v1_chr10_-_98325100_98325183	0.13234	SOX2.p2	AK000756|TM9SF3|56889|transmembrane 9 superfamily member 3
hg19_v1_chr1_+_100818031_100818050	0.13193	SOX2.p2	AF064102|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)
hg19_v1_chr20_-_45927496_45927643	0.131722	SOX2.p2	BC030721|ZMYND8|23613|zinc finger, MYND-type containing 8
hg19_v1_chr15_-_52263947_52263978	0.131655	SOX2.p2	BC018147|LEO1|123169|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	NM_138792|LEO1|123169|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AK055762|LEO1|123169|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AK297972|LEO1|123169|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AY302186|LEO1|123169|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
hg19_v1_chr1_-_154155698_154155724	0.130993	SOX2.p2	AK298678|TPM3|7170|tropomyosin 3	NM_001043351|TPM3|7170|tropomyosin 3	NM_001043352|TPM3|7170|tropomyosin 3	NM_001043353|TPM3|7170|tropomyosin 3	NM_153649|TPM3|7170|tropomyosin 3
hg19_v1_chr9_+_113431050_113431183	0.130761	SOX2.p2	NM_001166280|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	NM_001166281|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	NM_005592|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	AF006464|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	BC109098|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	BC109099|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	EU832778|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	EU832779|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	GQ129313|MUSK|4593|muscle, skeletal, receptor tyrosine kinase
hg19_v1_chr14_+_59951141_59951314	0.130713	SOX2.p2	NM_001098625|JKAMP|51528|JNK1/MAPK8-associated membrane protein	NM_016475|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AF151047|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AF161445|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AF212245|JKAMP|51528|JNK1/MAPK8-associated membrane protein	BC010359|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK027591|JKAMP|51528|JNK1/MAPK8-associated membrane protein	BC005198|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK021683|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AL136696|JKAMP|51528|JNK1/MAPK8-associated membrane protein	BX161501|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK056145|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK298209|JKAMP|51528|JNK1/MAPK8-associated membrane protein
hg19_v1_chr7_+_23286390_23286399	0.130488	SOX2.p2	AK292078|GPNMB|10457|glycoprotein (transmembrane) nmb	AK296779|GPNMB|10457|glycoprotein (transmembrane) nmb	AK297031|GPNMB|10457|glycoprotein (transmembrane) nmb	AK297803|GPNMB|10457|glycoprotein (transmembrane) nmb	AY359124|GPNMB|10457|glycoprotein (transmembrane) nmb	BC032783|GPNMB|10457|glycoprotein (transmembrane) nmb
hg19_v1_chr12_-_122018100_122018418	0.13045	SOX2.p2	AK127328|KDM2B|84678|lysine (K)-specific demethylase 2B	NM_001005366|KDM2B|84678|lysine (K)-specific demethylase 2B
hg19_v1_chr3_-_14989399_14989526	0.130192	SOX2.p2	BC056913|LOC100505641|100505641|uncharacterized LOC100505641
hg19_v1_chr10_+_95517565_95517727	0.129844	SOX2.p2	NM_005097|LGI1|9211|leucine-rich, glioma inactivated 1	BC022500|LGI1|9211|leucine-rich, glioma inactivated 1	AF055636|LGI1|9211|leucine-rich, glioma inactivated 1	AF473548|LGI1|9211|leucine-rich, glioma inactivated 1	AK309416|LGI1|9211|leucine-rich, glioma inactivated 1	AY358885|LGI1|9211|leucine-rich, glioma inactivated 1	AK303956|LGI1|9211|leucine-rich, glioma inactivated 1
hg19_v1_chr7_-_47621635_47621692	0.129825	SOX2.p2	CR749644|TNS3|64759|tensin 3
hg19_v1_chr12_+_50156977_50157080	0.1298	SOX2.p2	AK026605|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6
hg19_v1_chr18_-_51690988_51690996	0.129579	SOX2.p2	AL110266|MBD2|8932|methyl-CpG binding domain protein 2
hg19_v1_chr4_+_41614725_41614803	0.129247	SOX2.p2	AK294774|LIMCH1|22998|LIM and calponin homology domains 1
hg19_v1_chr2_-_238499713_238499768	0.129155	SOX2.p2	BC023661|RAB17|64284|RAB17, member RAS oncogene family	AK225423|RAB17|64284|RAB17, member RAS oncogene family	AK022600|RAB17|64284|RAB17, member RAS oncogene family	NM_022449|RAB17|64284|RAB17, member RAS oncogene family
hg19_v1_chr19_-_44143943_44144031	0.128886	SOX2.p2	BC068457|CADM4|199731|cell adhesion molecule 4	AK313028|CADM4|199731|cell adhesion molecule 4	AF363368|CADM4|199731|cell adhesion molecule 4	BC113963|CADM4|199731|cell adhesion molecule 4	NM_145296|CADM4|199731|cell adhesion molecule 4
hg19_v1_chr9_-_123476578_123476857	0.128838	SOX2.p2	AY358370|MEGF9|1955|multiple EGF-like-domains 9	AK295380|MEGF9|1955|multiple EGF-like-domains 9	NM_001080497|MEGF9|1955|multiple EGF-like-domains 9
hg19_v1_chr11_+_22696381_22696415	0.128812	SOX2.p2	CR450285|GAS2|2620|growth arrest-specific 2
hg19_v1_chr1_+_33116748_33116958	0.128733	SOX2.p2	NM_001135255|RBBP4|5928|retinoblastoma binding protein 4	NM_005610|RBBP4|5928|retinoblastoma binding protein 4	AK312571|RBBP4|5928|retinoblastoma binding protein 4	AK299410|RBBP4|5928|retinoblastoma binding protein 4	BC003092|RBBP4|5928|retinoblastoma binding protein 4	X74262|RBBP4|5928|retinoblastoma binding protein 4	X71810|RBBP4|5928|retinoblastoma binding protein 4	BC053904|RBBP4|5928|retinoblastoma binding protein 4	AK222779|RBBP4|5928|retinoblastoma binding protein 4	BC075836|RBBP4|5928|retinoblastoma binding protein 4	DQ892499|RBBP4|5928|retinoblastoma binding protein 4	DQ895712|RBBP4|5928|retinoblastoma binding protein 4	BT007309|RBBP4|5928|retinoblastoma binding protein 4	AK299251|RBBP4|5928|retinoblastoma binding protein 4	NM_001135256|RBBP4|5928|retinoblastoma binding protein 4
hg19_v1_chr12_+_57522429_57522498	0.128616	SOX2.p2	BC045107|LRP1|4035|low density lipoprotein receptor-related protein 1
hg19_v1_chr19_-_33360641_33360682	0.128494	SOX2.p2	BC029802|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9	AF141289|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9	AB033548|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9	AK026446|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9	AK223147|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9	AK313708|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9	BC017962|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9	NM_001126335|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9	NM_001243036|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9	NM_014270|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9
hg19_v1_chr12_+_106751435_106751506	0.128452	SOX2.p2	NM_018082|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B	BX537447|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B
hg19_v1_chr2_+_202047803_202047917	0.128111	SOX2.p2	AK310746|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	U86214|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AK304859|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AK225475|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AY690601|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	BC042844|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	U60519|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AJ487678|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AJ487679|CASP10|843|caspase 10, apoptosis-related cysteine peptidase
hg19_v1_chr19_+_44100734_44100787	0.128063	SOX2.p2	NM_001145347|ZNF576|79177|zinc finger protein 576	BC002981|ZNF576|79177|zinc finger protein 576
hg19_v1_chr20_-_20693122_20693334	0.127976	SOX2.p2	DQ310704|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)	BC171842|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)	NM_020343|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)
hg19_v1_chr19_+_12780516_12780603	0.127763	SOX2.p2	NM_032332|WDR83|84292|WD repeat domain 83	AK223195|WDR83|84292|WD repeat domain 83	BC005870|WDR83|84292|WD repeat domain 83
hg19_v1_chr17_+_53344966_53345007	0.127676	SOX2.p2	AK295726|HLF|3131|hepatic leukemia factor	AK074289|HLF|3131|hepatic leukemia factor
hg19_v1_chr1_-_205719157_205719227	0.127612	SOX2.p2	AK025133|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AK225228|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AJ012584|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg19_v1_chr2_-_142889269_142889269	0.127567	SOX2.p2	AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B	NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B
hg19_v1_chr10_+_35416089_35416182	0.127491	SOX2.p2	D14825|CREM|1390|cAMP responsive element modulator
hg19_v1_chr2_+_191273012_191273115	0.127363	SOX2.p2	AK127176|MFSD6|54842|major facilitator superfamily domain containing 6	NM_017694|MFSD6|54842|major facilitator superfamily domain containing 6
hg19_v1_chr12_+_498513_498560	0.127233	SOX2.p2	AK316029|CCDC77|84318|coiled-coil domain containing 77	NM_001130147|CCDC77|84318|coiled-coil domain containing 77	NM_001130148|CCDC77|84318|coiled-coil domain containing 77	AK308216|CCDC77|84318|coiled-coil domain containing 77
hg19_v1_chr13_-_61989209_61989297	0.127099	SOX2.p2	AK314607|PCDH20|64881|protocadherin 20	BC027907|PCDH20|64881|protocadherin 20	AF169693|PCDH20|64881|protocadherin 20	AK094680|PCDH20|64881|protocadherin 20
hg19_v1_chr2_+_187454987_187455067	0.126883	SOX2.p2	EF560727|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)	M14648|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)
hg19_v1_chr1_-_167523016_167523110	0.126807	SOX2.p2	NM_003851|CREG1|8804|cellular repressor of E1A-stimulated genes 1
hg19_v1_chr2_+_61292999_61293036	0.12679	SOX2.p2	AK131267|KIAA1841|84542|KIAA1841	NM_001129993|KIAA1841|84542|KIAA1841	BC039298|KIAA1841|84542|KIAA1841	AK309749|KIAA1841|84542|KIAA1841
hg19_v1_chr21_+_27107522_27107531	0.126682	SOX2.p2	AK313545|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa
hg19_v1_chr10_+_5005453_5005576	0.126618	SOX2.p2	NM_001353|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)
hg19_v1_chr12_-_24102563_24102641	0.12661	SOX2.p2	AK074317|SOX5|6660|SRY (sex determining region Y)-box 5	BC065532|SOX5|6660|SRY (sex determining region Y)-box 5	AB081589|SOX5|6660|SRY (sex determining region Y)-box 5	NM_006940|SOX5|6660|SRY (sex determining region Y)-box 5
hg19_v1_chr7_-_99774821_99775034	0.126518	SOX2.p2	AM392909|GPC2|221914|glypican 2	DQ893325|GPC2|221914|glypican 2	DQ896641|GPC2|221914|glypican 2	AL834418|GPC2|221914|glypican 2	AK096281|GPC2|221914|glypican 2	BC027972|GPC2|221914|glypican 2	NM_152742|GPC2|221914|glypican 2	AY093588|GPC2|221914|glypican 2
hg19_v1_chr1_-_168105902_168105938	0.126482	SOX2.p2	AK298797|GPR161|23432|G protein-coupled receptor 161
hg19_v1_chr12_+_93096618_93096618	0.126478	SOX2.p2	NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74	NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74
hg19_v1_chr17_-_1248346_1248366	0.126369	SOX2.p2	L13388|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)
hg19_v1_chr1_-_17765052_17765071	0.126354	SOX2.p2	BC053908|RCC2|55920|regulator of chromosome condensation 2	NM_001136204|RCC2|55920|regulator of chromosome condensation 2
hg19_v1_chr18_+_66465316_66465369	0.126101	SOX2.p2	NM_024781|CCDC102B|79839|coiled-coil domain containing 102B	CR749520|CCDC102B|79839|coiled-coil domain containing 102B
hg19_v1_chr14_-_24777153_24777155	0.126018	SOX2.p2	AK000387|CIDEB|27141|cell death-inducing DFFA-like effector b
hg19_v1_chr14_-_23755308_23755342	0.125951	SOX2.p2	NM_020834|HOMEZ|57594|homeobox and leucine zipper encoding
hg19_v1_chr8_-_33457435_33457484	0.125653	SOX2.p2	AB237597|DUSP26|78986|dual specificity phosphatase 26 (putative)	AB103376|DUSP26|78986|dual specificity phosphatase 26 (putative)	AY902194|DUSP26|78986|dual specificity phosphatase 26 (putative)	BC001613|DUSP26|78986|dual specificity phosphatase 26 (putative)	NM_024025|DUSP26|78986|dual specificity phosphatase 26 (putative)
hg19_v1_chr12_-_42877785_42877814	0.125574	SOX2.p2	NM_001144882|PRICKLE1|144165|prickle homolog 1 (Drosophila)	NM_001144883|PRICKLE1|144165|prickle homolog 1 (Drosophila)
hg19_v1_chr1_-_149814264_149814317	0.125439	SOX2.p2	BC096705|HIST2H2AA3|8337|histone cluster 2, H2aa3	BC096739|HIST2H2AA3|8337|histone cluster 2, H2aa3	BC098171|HIST2H2AA3|8337|histone cluster 2, H2aa3	CR536525|HIST2H2AA3|8337|histone cluster 2, H2aa3	CR541872|HIST2H2AA3|8337|histone cluster 2, H2aa3	EU831480|HIST2H2AA4|723790|histone cluster 2, H2aa4	EU831567|HIST2H2AA4|723790|histone cluster 2, H2aa4	BC001629|HIST2H2AA3|8337|histone cluster 2, H2aa3	BC019308|HIST2H2AA3|8337|histone cluster 2, H2aa3	AK312163|HIST2H2AA3|8337|histone cluster 2, H2aa3	L19779|HIST2H2AA3|8337|histone cluster 2, H2aa3	NM_001040874|HIST2H2AA4|723790|histone cluster 2, H2aa4	NM_003516|HIST2H2AA3|8337|histone cluster 2, H2aa3
hg19_v1_chr14_+_39703119_39703318	0.125339	SOX2.p2	AK314069|MIA2|117153|melanoma inhibitory activity 2	BX648228|MIA2|117153|melanoma inhibitory activity 2	NM_054024|MIA2|117153|melanoma inhibitory activity 2	BC035981|MIA2|117153|melanoma inhibitory activity 2	BC130537|MIA2|117153|melanoma inhibitory activity 2	BC130563|MIA2|117153|melanoma inhibitory activity 2	AM393252|MIA2|117153|melanoma inhibitory activity 2	AM393582|MIA2|117153|melanoma inhibitory activity 2	HQ258350|MIA2|117153|melanoma inhibitory activity 2	AF390175|MIA2|117153|melanoma inhibitory activity 2
hg19_v1_chr15_-_48937795_48938064	0.125264	SOX2.p2	BC146854|FBN1|2200|fibrillin 1	AK304737|FBN1|2200|fibrillin 1	BC094721|FBN1|2200|fibrillin 1	NM_000138|FBN1|2200|fibrillin 1	X63556|FBN1|2200|fibrillin 1
hg19_v1_chr9_-_4741049_4741068	0.125141	SOX2.p2	AF086913|AK3|50808|adenylate kinase 3	AF100785|AK3|50808|adenylate kinase 3
hg19_v1_chrX_-_16888462_16888533	0.125119	SOX2.p2	NM_002893|RBBP7|5931|retinoblastoma binding protein 7
hg19_v1_chr2_-_111230651_111230651	0.125047	SOX2.p2	BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 readthrough	NM_001205288|LIMS3L|100288695|LIM and senescent cell antigen-like domains 3-like	NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3
hg19_v1_chr5_-_88119604_88119743	0.124982	SOX2.p2	EU446634|MEF2C|4208|myocyte enhancer factor 2C	EU832832|MEF2C|4208|myocyte enhancer factor 2C	FM163484|MEF2C|4208|myocyte enhancer factor 2C	FM180475|MEF2C|4208|myocyte enhancer factor 2C	GQ129219|MEF2C|4208|myocyte enhancer factor 2C	GQ129221|MEF2C|4208|myocyte enhancer factor 2C	GQ129392|MEF2C|4208|myocyte enhancer factor 2C	GQ129393|MEF2C|4208|myocyte enhancer factor 2C	NM_001193348|MEF2C|4208|myocyte enhancer factor 2C	NM_001193349|MEF2C|4208|myocyte enhancer factor 2C
hg19_v1_chr6_-_105850958_105850958	0.124941	SOX2.p2	BC030636|PREP|5550|prolyl endopeptidase
hg19_v1_chr12_+_45686465_45686465	0.124712	SOX2.p2	AL832340|ANO6|196527|anoctamin 6	NM_001142678|ANO6|196527|anoctamin 6
hg19_v1_chr5_+_67586466_67586627	0.124653	SOX2.p2	NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg19_v1_chr17_-_74639719_74639893	0.124595	SOX2.p2	AY096001|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1	BC022462|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1	AK310906|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1	AY358918|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1	BC063830|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1	NM_018414|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1
hg19_v1_chr2_+_208576446_208576555	0.124456	SOX2.p2	BC067253|CCNYL1|151195|cyclin Y-like 1
hg19_v1_chr2_-_9143742_9143901	0.124439	SOX2.p2	AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2
hg19_v1_chr1_-_154155658_154155658	0.124407	SOX2.p2	BC073144|TPM3|7170|tropomyosin 3
hg19_v1_chr2_+_32288579_32288822	0.124217	SOX2.p2	AB029006|SPAST|6683|spastin	BC150260|SPAST|6683|spastin	NM_014946|SPAST|6683|spastin	NM_199436|SPAST|6683|spastin	AJ246001|SPAST|6683|spastin
hg19_v1_chr13_-_72440143_72440375	0.123985	SOX2.p2	AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)	BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)	AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)
hg19_v1_chr7_+_142960502_142960586	0.123679	SOX2.p2	NM_001143679|GSTK1|373156|glutathione S-transferase kappa 1	NM_001143680|GSTK1|373156|glutathione S-transferase kappa 1	NM_001143681|GSTK1|373156|glutathione S-transferase kappa 1	NM_015917|GSTK1|373156|glutathione S-transferase kappa 1	AK295592|GSTK1|373156|glutathione S-transferase kappa 1	AL136938|GSTK1|373156|glutathione S-transferase kappa 1	AF087849|GSTK1|373156|glutathione S-transferase kappa 1	AY520571|GSTK1|373156|glutathione S-transferase kappa 1	AF070657|GSTK1|373156|glutathione S-transferase kappa 1	AK000640|GSTK1|373156|glutathione S-transferase kappa 1	BC001231|GSTK1|373156|glutathione S-transferase kappa 1	AK095263|GSTK1|373156|glutathione S-transferase kappa 1	AK289580|GSTK1|373156|glutathione S-transferase kappa 1
hg19_v1_chr17_+_61678218_61678247	0.12367	SOX2.p2	AK315375|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I	NM_016360|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I	AK094052|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I	BC005049|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I
hg19_v1_chr14_+_90863365_90863489	0.123608	SOX2.p2	BC011834|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	BC047523|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	U16851|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	BC000454|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	BC008597|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	AK289937|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	M27319|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)
hg19_v1_chrX_-_133931146_133931261	0.123502	SOX2.p2	BC019221|FAM122B|159090|family with sequence similarity 122B	NM_001166599|FAM122B|159090|family with sequence similarity 122B	AK124650|FAM122B|159090|family with sequence similarity 122B	AK297720|FAM122B|159090|family with sequence similarity 122B	NM_001166600|FAM122B|159090|family with sequence similarity 122B	NM_001170757|FAM122B|159090|family with sequence similarity 122B
hg19_v1_chr8_-_87520849_87520978	0.123155	SOX2.p2	BX640636|FAM82B|51115|family with sequence similarity 82, member B	AK303122|FAM82B|51115|family with sequence similarity 82, member B	BC009671|FAM82B|51115|family with sequence similarity 82, member B	AK297896|FAM82B|51115|family with sequence similarity 82, member B	AF151848|FAM82B|51115|family with sequence similarity 82, member B	AK000672|FAM82B|51115|family with sequence similarity 82, member B
hg19_v1_chr1_-_154155637_154155640	0.123055	SOX2.p2	BC015403|TPM3|7170|tropomyosin 3
hg19_v1_chr4_+_41258909_41258928	0.122968	SOX2.p2	BC000332|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC018838|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
hg19_v1_chr5_+_140864626_140864743	0.122753	SOX2.p2	BC042650|PCDHGC4|56098|protocadherin gamma subfamily C, 4	AF152338|PCDHGC4|56098|protocadherin gamma subfamily C, 4	AF152525|PCDHGC4|56098|protocadherin gamma subfamily C, 4	BC101035|PCDHGC4|56098|protocadherin gamma subfamily C, 4	BC101038|PCDHGC4|56098|protocadherin gamma subfamily C, 4	NM_018928|PCDHGC4|56098|protocadherin gamma subfamily C, 4	NM_032406|PCDHGC4|56098|protocadherin gamma subfamily C, 4	BC101036|PCDHGC4|56098|protocadherin gamma subfamily C, 4
hg19_v1_chr6_-_132834165_132834336	0.122659	SOX2.p2	U77942|STX7|8417|syntaxin 7	BC011975|STX7|8417|syntaxin 7	AK294911|STX7|8417|syntaxin 7	AK301464|STX7|8417|syntaxin 7	NM_003569|STX7|8417|syntaxin 7
hg19_v1_chr6_+_149068148_149068270	0.122657	SOX2.p2	NM_005715|UST|10090|uronyl-2-sulfotransferase
hg19_v1_chr1_+_36387788_36387930	0.122459	SOX2.p2	AK000326|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1
hg19_v1_chr12_+_100897137_100897202	0.122439	SOX2.p2	AF478445|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4	AF478446|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4	NM_001206992|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4	NM_001206993|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4	AK296612|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4	BX571749|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4	BC071778|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4	AK296647|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4
hg19_v1_chr8_-_74659082_74659235	0.1222	SOX2.p2	AK294466|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	CR627442|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164380|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164381|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164382|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164383|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164385|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_014393|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)
hg19_v1_chr5_-_114515733_114516242	0.122164	SOX2.p2	AB196558|TRIM36|55521|tripartite motif containing 36	AJ272269|TRIM36|55521|tripartite motif containing 36	BC130334|TRIM36|55521|tripartite motif containing 36	AK125426|TRIM36|55521|tripartite motif containing 36	BC045164|TRIM36|55521|tripartite motif containing 36	BC046096|TRIM36|55521|tripartite motif containing 36	NM_001017397|TRIM36|55521|tripartite motif containing 36	NM_001017398|TRIM36|55521|tripartite motif containing 36	NM_018700|TRIM36|55521|tripartite motif containing 36
hg19_v1_chr2_+_74120092_74120111	0.122037	SOX2.p2	NM_001199893|ACTG2|72|actin, gamma 2, smooth muscle, enteric	NM_001615|ACTG2|72|actin, gamma 2, smooth muscle, enteric
hg19_v1_chr12_+_50478942_50479032	0.121971	SOX2.p2	NM_003076|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	NM_139071|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	U66617|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	BC009368|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
hg19_v1_chr4_+_184827882_184827940	0.12191	SOX2.p2	
hg19_v1_chr16_+_8806825_8806846	0.121808	SOX2.p2	NM_000663|ABAT|18|4-aminobutyrate aminotransferase	BC013965|ABAT|18|4-aminobutyrate aminotransferase
hg19_v1_chr8_+_61429543_61429550	0.121707	SOX2.p2	AK312344|RAB2A|5862|RAB2A, member RAS oncogene family
hg19_v1_chr7_+_94024201_94024342	0.121694	SOX2.p2	AK297786|COL1A2|1278|collagen, type I, alpha 2	AK223175|COL1A2|1278|collagen, type I, alpha 2	AK300194|COL1A2|1278|collagen, type I, alpha 2	Z74616|COL1A2|1278|collagen, type I, alpha 2	AK226074|COL1A2|1278|collagen, type I, alpha 2	BC042586|COL1A2|1278|collagen, type I, alpha 2	BC054498|COL1A2|1278|collagen, type I, alpha 2	Y00724|COL1A2|1278|collagen, type I, alpha 2
hg19_v1_chr22_+_45072936_45073004	0.121556	SOX2.p2	AK091884|PRR5|55615|proline rich 5 (renal)	AK055848|PRR5|55615|proline rich 5 (renal)
hg19_v1_chr9_-_128003615_128003632	0.121538	SOX2.p2	AK293604|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	X87949|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
hg19_v1_chr1_-_154155636_154155636	0.121281	SOX2.p2	BC000771|TPM3|7170|tropomyosin 3
hg19_v1_chr17_+_55334373_55334373	0.121112	SOX2.p2	AK093888|MSI2|124540|musashi homolog 2 (Drosophila)	NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)
hg19_v1_chrX_-_16888175_16888436	0.120922	SOX2.p2	CR541701|RBBP7|5931|retinoblastoma binding protein 7	AK291567|RBBP7|5931|retinoblastoma binding protein 7	BC114500|RBBP7|5931|retinoblastoma binding protein 7	BC114501|RBBP7|5931|retinoblastoma binding protein 7	U35143|RBBP7|5931|retinoblastoma binding protein 7
hg19_v1_chr1_-_40042072_40042150	0.120636	SOX2.p2	BC029969|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)
hg19_v1_chr22_+_32149962_32149964	0.120618	SOX2.p2	AK294987|DEPDC5|9681|DEP domain containing 5
hg19_v1_chr7_-_15601574_15601639	0.120604	SOX2.p2	BC108676|AGMO|392636|alkylglycerol monooxygenase	AK131284|AGMO|392636|alkylglycerol monooxygenase	NM_001004320|AGMO|392636|alkylglycerol monooxygenase
hg19_v1_chr10_+_13203547_13203589	0.12059	SOX2.p2	NM_018518|MCM10|55388|minichromosome maintenance complex component 10	NM_182751|MCM10|55388|minichromosome maintenance complex component 10	AK292701|MCM10|55388|minichromosome maintenance complex component 10	AK055695|MCM10|55388|minichromosome maintenance complex component 10	BC101727|MCM10|55388|minichromosome maintenance complex component 10	AB042719|MCM10|55388|minichromosome maintenance complex component 10	AL136840|MCM10|55388|minichromosome maintenance complex component 10	BC143490|MCM10|55388|minichromosome maintenance complex component 10
hg19_v1_chr17_-_56595192_56595294	0.120231	SOX2.p2	AF264717|MTMR4|9110|myotubularin related protein 4	BC035609|MTMR4|9110|myotubularin related protein 4	NM_004687|MTMR4|9110|myotubularin related protein 4
hg19_v1_chr16_-_53737713_53737802	0.120167	SOX2.p2	BC136433|RPGRIP1L|23322|RPGRIP1-like	AK096333|RPGRIP1L|23322|RPGRIP1-like	AK308390|RPGRIP1L|23322|RPGRIP1-like	BC017977|RPGRIP1L|23322|RPGRIP1-like	CR749645|RPGRIP1L|23322|RPGRIP1-like	AK307929|RPGRIP1L|23322|RPGRIP1-like	EF565106|RPGRIP1L|23322|RPGRIP1-like	NM_001127897|RPGRIP1L|23322|RPGRIP1-like	NM_015272|RPGRIP1L|23322|RPGRIP1-like	AK304790|RPGRIP1L|23322|RPGRIP1-like
hg19_v1_chr11_-_118661863_118661896	0.119976	SOX2.p2	Z11685|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg19_v1_chrX_+_18709044_18709045	0.119779	SOX2.p2	NM_006240|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	NM_152224|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	NM_152226|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	X97867|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	AK292235|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	BC036026|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1
hg19_v1_chr10_-_98336445_98336573	0.119693	SOX2.p2	BC020959|TM9SF3|56889|transmembrane 9 superfamily member 3	AK027788|TM9SF3|56889|transmembrane 9 superfamily member 3	AY358819|TM9SF3|56889|transmembrane 9 superfamily member 3
hg19_v1_chr18_-_32924381_32924416	0.119634	SOX2.p2	AF038964|ZNF24|7572|zinc finger protein 24	BC003566|ZNF24|7572|zinc finger protein 24	U68536|ZNF24|7572|zinc finger protein 24	BC016801|ZNF24|7572|zinc finger protein 24
hg19_v1_chr9_-_128003348_128003613	0.119339	SOX2.p2	AF188611|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	AF216292|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	DQ892173|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	DQ895368|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	AJ271729|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	BC020235|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
hg19_v1_chr1_-_156217717_156217863	0.119278	SOX2.p2	AK294143|PAQR6|79957|progestin and adipoQ receptor family member VI	BC058509|PAQR6|79957|progestin and adipoQ receptor family member VI	NM_198406|PAQR6|79957|progestin and adipoQ receptor family member VI	AF455047|PAQR6|79957|progestin and adipoQ receptor family member VI	AF455045|PAQR6|79957|progestin and adipoQ receptor family member VI	AY424284|PAQR6|79957|progestin and adipoQ receptor family member VI	AK095197|PAQR6|79957|progestin and adipoQ receptor family member VI	NM_024897|PAQR6|79957|progestin and adipoQ receptor family member VI	AK095143|PAQR6|79957|progestin and adipoQ receptor family member VI	AF455046|PAQR6|79957|progestin and adipoQ receptor family member VI	AK054682|PAQR6|79957|progestin and adipoQ receptor family member VI	AK094346|PAQR6|79957|progestin and adipoQ receptor family member VI	AK316034|PAQR6|79957|progestin and adipoQ receptor family member VI	AK295915|PAQR6|79957|progestin and adipoQ receptor family member VI	AK295916|PAQR6|79957|progestin and adipoQ receptor family member VI
hg19_v1_chr14_-_91884138_91884159	0.119208	SOX2.p2	AF070587|CCDC88C|440193|coiled-coil domain containing 88C
hg19_v1_chr2_+_31456879_31456964	0.119118	SOX2.p2	AK316006|EHD3|30845|EH-domain containing 3	NM_014600|EHD3|30845|EH-domain containing 3
hg19_v1_chrX_-_135962929_135962942	0.119076	SOX2.p2	NM_001164803|RBMX|27316|RNA binding motif protein, X-linked	NM_002139|RBMX|27316|RNA binding motif protein, X-linked
hg19_v1_chr19_-_42806460_42806861	0.118995	SOX2.p2	CR407626|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	D63391|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	BC007863|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	BC003016|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	NM_002573|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg19_v1_chr3_-_164796275_164796282	0.118891	SOX2.p2	BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)	X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)	NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)
hg19_v1_chrX_-_54824672_54824672	0.118841	SOX2.p2	AY358170|ITIH6|347365|inter-alpha-trypsin inhibitor heavy chain family, member 6	NM_198510|ITIH6|347365|inter-alpha-trypsin inhibitor heavy chain family, member 6
hg19_v1_chr14_-_21852161_21852178	0.118471	SOX2.p2	BC000565|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	BC014046|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	BC111402|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)
hg19_v1_chr4_+_77953942_77954068	0.118436	SOX2.p2	AK124592|SEPT11|55752|septin 11
hg19_v1_chr12_+_121132677_121132759	0.118129	SOX2.p2	
hg19_v1_chr8_-_38325825_38326072	0.118114	SOX2.p2	M34187|FGFR1|2260|fibroblast growth factor receptor 1	M34188|FGFR1|2260|fibroblast growth factor receptor 1	M34186|FGFR1|2260|fibroblast growth factor receptor 1
hg19_v1_chr14_-_24777184_24777188	0.117924	SOX2.p2	BC035970|CIDEB|27141|cell death-inducing DFFA-like effector b
hg19_v1_chr17_+_26646120_26646267	0.117914	SOX2.p2	NM_014573|TMEM97|27346|transmembrane protein 97	L19183|TMEM97|27346|transmembrane protein 97	AK299511|TMEM97|27346|transmembrane protein 97	AK307678|TMEM97|27346|transmembrane protein 97	BC017362|TMEM97|27346|transmembrane protein 97	BC091504|TMEM97|27346|transmembrane protein 97	AK293331|TMEM97|27346|transmembrane protein 97
hg19_v1_chr5_+_121647773_121647943	0.117878	SOX2.p2	DQ227317|SNCAIP|9627|synuclein, alpha interacting protein	NM_001242935|SNCAIP|9627|synuclein, alpha interacting protein	NM_005460|SNCAIP|9627|synuclein, alpha interacting protein	BC094759|SNCAIP|9627|synuclein, alpha interacting protein	BC040552|SNCAIP|9627|synuclein, alpha interacting protein	AK304646|SNCAIP|9627|synuclein, alpha interacting protein	AK310835|SNCAIP|9627|synuclein, alpha interacting protein	AF076929|SNCAIP|9627|synuclein, alpha interacting protein	BC033743|SNCAIP|9627|synuclein, alpha interacting protein
hg19_v1_chr15_+_78730568_78730679	0.117831	SOX2.p2	AB209403|IREB2|3658|iron-responsive element binding protein 2	BC017880|IREB2|3658|iron-responsive element binding protein 2	AK292992|IREB2|3658|iron-responsive element binding protein 2	BC117481|IREB2|3658|iron-responsive element binding protein 2	BC117483|IREB2|3658|iron-responsive element binding protein 2	BC143948|IREB2|3658|iron-responsive element binding protein 2	HQ258663|IREB2|3658|iron-responsive element binding protein 2	M58511|IREB2|3658|iron-responsive element binding protein 2
hg19_v1_chr1_-_17766241_17766301	0.117708	SOX2.p2	NM_018715|RCC2|55920|regulator of chromosome condensation 2
hg19_v1_chr12_-_16758839_16758903	0.117697	SOX2.p2	AK316021|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK294474|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001243612|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr3_+_173116243_173116243	0.117696	SOX2.p2	BC032555|NLGN1|22871|neuroligin 1	NM_014932|NLGN1|22871|neuroligin 1
hg19_v1_chr22_+_35777087_35777166	0.117584	SOX2.p2	AK313120|HMOX1|3162|heme oxygenase (decycling) 1	BC001491|HMOX1|3162|heme oxygenase (decycling) 1	M23041|HMOX1|3162|heme oxygenase (decycling) 1	BT019785|HMOX1|3162|heme oxygenase (decycling) 1	CR541945|HMOX1|3162|heme oxygenase (decycling) 1	CR541968|HMOX1|3162|heme oxygenase (decycling) 1	CU013103|HMOX1|3162|heme oxygenase (decycling) 1	CU013391|HMOX1|3162|heme oxygenase (decycling) 1	DQ892310|HMOX1|3162|heme oxygenase (decycling) 1	DQ895510|HMOX1|3162|heme oxygenase (decycling) 1	JF323038|HMOX1|3162|heme oxygenase (decycling) 1
hg19_v1_chr8_-_33457491_33457500	0.117518	SOX2.p2	AB158288|DUSP26|78986|dual specificity phosphatase 26 (putative)	AK055704|DUSP26|78986|dual specificity phosphatase 26 (putative)
hg19_v1_chr6_-_90062439_90062441	0.117409	SOX2.p2	AK223464|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U	AK300629|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U
hg19_v1_chr1_-_225616556_225616556	0.117344	SOX2.p2	NM_194442|LBR|3930|lamin B receptor
hg19_v1_chr19_-_50354906_50354968	0.117289	SOX2.p2	BC043359|LOC100506033|100506033|uncharacterized LOC100506033
hg19_v1_chr8_-_38325524_38325691	0.117273	SOX2.p2	X51803|FGFR1|2260|fibroblast growth factor receptor 1	X57119|FGFR1|2260|fibroblast growth factor receptor 1	X57120|FGFR1|2260|fibroblast growth factor receptor 1	X57121|FGFR1|2260|fibroblast growth factor receptor 1	X57122|FGFR1|2260|fibroblast growth factor receptor 1	M37722|FGFR1|2260|fibroblast growth factor receptor 1	M34185|FGFR1|2260|fibroblast growth factor receptor 1
hg19_v1_chr11_-_118901570_118901619	0.117097	SOX2.p2	BC014663|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	AB209026|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	AK294993|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	AK298395|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	AK300646|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	AK289642|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	AK312628|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	NM_001164277|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	NM_001164278|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	NM_001164279|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	NM_001467|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4
hg19_v1_chr7_-_94953734_94953815	0.116962	SOX2.p2	M63013|PON1|5444|paraoxonase 1	M63012|PON1|5444|paraoxonase 1	S64615|PON1|5444|paraoxonase 1	AK314027|PON1|5444|paraoxonase 1	BC074719|PON1|5444|paraoxonase 1
hg19_v1_chr5_-_147162175_147162231	0.116804	SOX2.p2	BC017354|JAKMIP2|9832|janus kinase and microtubule interacting protein 2
hg19_v1_chr4_-_100484824_100484824	0.116784	SOX2.p2	BC028373|RG9MTD2|93587|RNA (guanine-9-) methyltransferase domain containing 2	NM_152292|RG9MTD2|93587|RNA (guanine-9-) methyltransferase domain containing 2
hg19_v1_chr1_-_154155664_154155666	0.116656	SOX2.p2	AK026559|TPM3|7170|tropomyosin 3	AK092712|TPM3|7170|tropomyosin 3
hg19_v1_chr7_-_94953827_94953883	0.11647	SOX2.p2	D84371|PON1|5444|paraoxonase 1	U53784|PON1|5444|paraoxonase 1	Z70723|PON1|5444|paraoxonase 1	NM_000446|PON1|5444|paraoxonase 1
hg19_v1_chr11_+_36616039_36616170	0.116223	SOX2.p2	AK290833|C11orf74|119710|chromosome 11 open reading frame 74	DQ121386|C11orf74|119710|chromosome 11 open reading frame 74	AK095997|C11orf74|119710|chromosome 11 open reading frame 74	AK299642|C11orf74|119710|chromosome 11 open reading frame 74	BC009561|C11orf74|119710|chromosome 11 open reading frame 74	BC051031|C11orf74|119710|chromosome 11 open reading frame 74	NM_138787|C11orf74|119710|chromosome 11 open reading frame 74	AK302634|C11orf74|119710|chromosome 11 open reading frame 74
hg19_v1_chr1_+_23695441_23695549	0.11608	SOX2.p2	BC054115|C1orf213|148898|chromosome 1 open reading frame 213	BC068594|C1orf213|148898|chromosome 1 open reading frame 213	AK074989|C1orf213|148898|chromosome 1 open reading frame 213
hg19_v1_chr16_+_58497628_58497648	0.116073	SOX2.p2	AB021172|NDRG4|65009|NDRG family member 4
hg19_v1_chr1_-_205719129_205719156	0.116066	SOX2.p2	AY823399|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg19_v1_chr5_-_111754738_111755009	0.115962	SOX2.p2	AB030240|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A	BC114942|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A	BC114632|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A	BC031042|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A	NM_022140|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A
hg19_v1_chr12_+_110940004_110940147	0.11591	SOX2.p2	AK124109|RAD9B|144715|RAD9 homolog B (S. pombe)	NM_152442|RAD9B|144715|RAD9 homolog B (S. pombe)	AK301826|RAD9B|144715|RAD9 homolog B (S. pombe)	BC037353|RAD9B|144715|RAD9 homolog B (S. pombe)	AK302512|RAD9B|144715|RAD9 homolog B (S. pombe)	AY297459|RAD9B|144715|RAD9 homolog B (S. pombe)	BC068031|RAD9B|144715|RAD9 homolog B (S. pombe)	BC047645|RAD9B|144715|RAD9 homolog B (S. pombe)	AK097665|RAD9B|144715|RAD9 homolog B (S. pombe)
hg19_v1_chr3_+_111578026_111578116	0.115889	SOX2.p2	NM_001134438|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2	NM_145753|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2	AK096151|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2	AK315050|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2
hg19_v1_chr18_-_53303129_53303187	0.115564	SOX2.p2	BC031056|TCF4|6925|transcription factor 4	NM_001243226|TCF4|6925|transcription factor 4
hg19_v1_chr12_+_112204690_112204694	0.115538	SOX2.p2	NM_000690|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	NM_001204889|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)
hg19_v1_chr13_-_24007822_24007859	0.115525	SOX2.p2	NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)
hg19_v1_chr11_-_115375065_115375296	0.115479	SOX2.p2	AB094146|CADM1|23705|cell adhesion molecule 1	CR457157|CADM1|23705|cell adhesion molecule 1	AF132811|CADM1|23705|cell adhesion molecule 1	BC125102|CADM1|23705|cell adhesion molecule 1	BC125103|CADM1|23705|cell adhesion molecule 1	AY358334|CADM1|23705|cell adhesion molecule 1	AK075502|CADM1|23705|cell adhesion molecule 1	BC035930|CADM1|23705|cell adhesion molecule 1	AK315245|CADM1|23705|cell adhesion molecule 1	BC047021|CADM1|23705|cell adhesion molecule 1	NM_001098517|CADM1|23705|cell adhesion molecule 1	NM_014333|CADM1|23705|cell adhesion molecule 1
hg19_v1_chr3_-_122134881_122134954	0.115331	SOX2.p2	BC025762|WDR5B|54554|WD repeat domain 5B	NM_019069|WDR5B|54554|WD repeat domain 5B
hg19_v1_chr15_-_70994608_70994646	0.115224	SOX2.p2	BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats
hg19_v1_chr2_+_208576239_208576364	0.115198	SOX2.p2	AK097751|CCNYL1|151195|cyclin Y-like 1	NM_001142300|CCNYL1|151195|cyclin Y-like 1	NM_152523|CCNYL1|151195|cyclin Y-like 1
hg19_v1_chrX_-_100306859_100306919	0.115148	SOX2.p2	AK315780|TRMT2B|79979|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)	AK022749|TRMT2B|79979|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)
hg19_v1_chr13_-_39612246_39612261	0.115116	SOX2.p2	NM_025138|PROSER1|80209|proline and serine rich 1	NM_170719|PROSER1|80209|proline and serine rich 1
hg19_v1_chr12_-_106641675_106642020	0.115026	SOX2.p2	BC067357|CKAP4|10970|cytoskeleton-associated protein 4	BC082972|CKAP4|10970|cytoskeleton-associated protein 4	NM_006825|CKAP4|10970|cytoskeleton-associated protein 4	X69910|CKAP4|10970|cytoskeleton-associated protein 4	BC094824|CKAP4|10970|cytoskeleton-associated protein 4	BC037578|CKAP4|10970|cytoskeleton-associated protein 4	AK223563|CKAP4|10970|cytoskeleton-associated protein 4	AK123693|CKAP4|10970|cytoskeleton-associated protein 4	BC025341|CKAP4|10970|cytoskeleton-associated protein 4
hg19_v1_chr6_+_25279765_25280023	0.115004	SOX2.p2	BC140770|LRRC16A|55604|leucine rich repeat containing 16A	FJ009082|LRRC16A|55604|leucine rich repeat containing 16A
hg19_v1_chr3_-_185655833_185655923	0.114681	SOX2.p2	AK315632|TRA2B|6434|transformer 2 beta homolog (Drosophila)	NM_001243879|TRA2B|6434|transformer 2 beta homolog (Drosophila)	NM_004593|TRA2B|6434|transformer 2 beta homolog (Drosophila)
hg19_v1_chr7_-_139477437_139478374	0.114503	SOX2.p2	AF208291|HIPK2|28996|homeodomain interacting protein kinase 2	AF326592|HIPK2|28996|homeodomain interacting protein kinase 2	NM_001113239|HIPK2|28996|homeodomain interacting protein kinase 2	NM_022740|HIPK2|28996|homeodomain interacting protein kinase 2
hg19_v1_chrX_-_131353460_131353543	0.114473	SOX2.p2	BC035382|RAP2C|57826|RAP2C, member of RAS oncogene family	AK310997|RAP2C|57826|RAP2C, member of RAS oncogene family
hg19_v1_chr5_-_60458228_60458306	0.114393	SOX2.p2	BC103711|C5orf43|643155|chromosome 5 open reading frame 43	BX648459|C5orf43|643155|chromosome 5 open reading frame 43	BC066550|C5orf43|643155|chromosome 5 open reading frame 43	BX538015|C5orf43|643155|chromosome 5 open reading frame 43	AK291180|C5orf43|643155|chromosome 5 open reading frame 43	NM_001048249|C5orf43|643155|chromosome 5 open reading frame 43
hg19_v1_chr6_+_27775898_27775985	0.11439	SOX2.p2	BC112254|HIST1H2AI|8329|histone cluster 1, H2ai	BC112256|HIST1H2AI|8329|histone cluster 1, H2ai	AK311766|HIST1H2AI|8329|histone cluster 1, H2ai	BC062305|HIST1H3F|8968|histone cluster 1, H3f	NM_003509|HIST1H2AI|8329|histone cluster 1, H2ai	HQ258047|HIST1H2AM|8336|histone cluster 1, H2am
hg19_v1_chr15_+_22892723_22892751	0.114324	SOX2.p2	D38549|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1	BC005097|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg19_v1_chr5_-_138211054_138211064	0.114272	SOX2.p2	NM_015564|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2
hg19_v1_chr19_+_51815095_51815101	0.114214	SOX2.p2	NM_001101372|IGLON5|402665|IgLON family member 5
hg19_v1_chr2_+_10091791_10091910	0.113964	SOX2.p2	NM_198182|GRHL1|29841|grainyhead-like 1 (Drosophila)	AK293855|GRHL1|29841|grainyhead-like 1 (Drosophila)	AK296982|GRHL1|29841|grainyhead-like 1 (Drosophila)	AK312950|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC063299|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC098456|GRHL1|29841|grainyhead-like 1 (Drosophila)	AF198489|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC067519|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC067520|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC067521|GRHL1|29841|grainyhead-like 1 (Drosophila)
hg19_v1_chr2_-_44586854_44586887	0.113859	SOX2.p2	BC143061|PREPL|9581|prolyl endopeptidase-like	BC143062|PREPL|9581|prolyl endopeptidase-like	DQ023506|PREPL|9581|prolyl endopeptidase-like	DQ023507|PREPL|9581|prolyl endopeptidase-like	NM_001042385|PREPL|9581|prolyl endopeptidase-like	NM_001042386|PREPL|9581|prolyl endopeptidase-like
hg19_v1_chr2_-_86116016_86116156	0.113856	SOX2.p2	AY359105|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AF119415|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AF344831|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	BC065936|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AK001340|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AB018356|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	NM_003896|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5
hg19_v1_chr7_+_23286420_23286476	0.11378	SOX2.p2	AF322909|GPNMB|10457|glycoprotein (transmembrane) nmb	BC025297|GPNMB|10457|glycoprotein (transmembrane) nmb	BC011595|GPNMB|10457|glycoprotein (transmembrane) nmb	DQ892084|GPNMB|10457|glycoprotein (transmembrane) nmb	DQ895277|GPNMB|10457|glycoprotein (transmembrane) nmb	BT007074|GPNMB|10457|glycoprotein (transmembrane) nmb
hg19_v1_chr1_-_21113160_21113184	0.113608	SOX2.p2	AK023129|HP1BP3|50809|heterochromatin protein 1, binding protein 3	NM_016287|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg19_v1_chr1_-_17764811_17764913	0.113426	SOX2.p2	BC142946|RCC2|55920|regulator of chromosome condensation 2
hg19_v1_chr8_-_10512616_10512665	0.11337	SOX2.p2	AY168341|RP1L1|94137|retinitis pigmentosa 1-like 1	AY168342|RP1L1|94137|retinitis pigmentosa 1-like 1	AY168343|RP1L1|94137|retinitis pigmentosa 1-like 1	AY168344|RP1L1|94137|retinitis pigmentosa 1-like 1	AY168345|RP1L1|94137|retinitis pigmentosa 1-like 1	AY168346|RP1L1|94137|retinitis pigmentosa 1-like 1	NM_178857|RP1L1|94137|retinitis pigmentosa 1-like 1	AJ491324|RP1L1|94137|retinitis pigmentosa 1-like 1
hg19_v1_chr1_-_150241409_150241608	0.113263	SOX2.p2	AY358951|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK300640|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK075452|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK298832|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK307358|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	NM_001077628|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	NM_001243771|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	NM_001243772|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	NM_016022|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)
hg19_v1_chr7_-_128415843_128415843	0.113256	SOX2.p2	DQ822478|OPN1SW|611|opsin 1 (cone pigments), short-wave-sensitive	NM_001708|OPN1SW|611|opsin 1 (cone pigments), short-wave-sensitive
hg19_v1_chr7_-_20826423_20826434	0.113097	SOX2.p2	AK299947|SP8|221833|Sp8 transcription factor
hg19_v1_chr11_-_6817013_6817138	0.113087	SOX2.p2	BC101489|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2	BC101491|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2	NM_003696|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2
hg19_v1_chr13_-_39612183_39612220	0.113051	SOX2.p2	AK074360|PROSER1|80209|proline and serine rich 1	AB107354|PROSER1|80209|proline and serine rich 1
hg19_v1_chr8_-_18541441_18541624	0.112862	SOX2.p2	EU832144|PSD3|23362|pleckstrin and Sec7 domain containing 3	EU832237|PSD3|23362|pleckstrin and Sec7 domain containing 3	AK296546|PSD3|23362|pleckstrin and Sec7 domain containing 3	BX647320|PSD3|23362|pleckstrin and Sec7 domain containing 3	BX647406|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg19_v1_chr1_+_244999007_244999024	0.112734	SOX2.p2	
hg19_v1_chr11_-_118661855_118661855	0.112733	SOX2.p2	BC039826|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg19_v1_chr16_+_57673206_57673429	0.112664	SOX2.p2	NM_001145774|GPR56|9289|G protein-coupled receptor 56	AK297236|GPR56|9289|G protein-coupled receptor 56	AK311156|GPR56|9289|G protein-coupled receptor 56	BC013207|GPR56|9289|G protein-coupled receptor 56
hg19_v1_chr12_-_16758312_16758338	0.112566	SOX2.p2	NM_001243611|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr9_+_15422875_15422949	0.112538	SOX2.p2	EU446705|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	BC014985|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa
hg19_v1_chr14_-_38064299_38064334	0.1125	SOX2.p2	AK313785|FOXA1|3169|forkhead box A1
hg19_v1_chr20_+_23345020_23345020	0.112433	SOX2.p2	AB100265|GZF1|64412|GDNF-inducible zinc finger protein 1	BC125188|GZF1|64412|GDNF-inducible zinc finger protein 1	BC154409|GZF1|64412|GDNF-inducible zinc finger protein 1	NM_022482|GZF1|64412|GDNF-inducible zinc finger protein 1
hg19_v1_chr10_+_114043413_114043492	0.112377	SOX2.p2	BC113497|TECTB|6975|tectorin beta	BC113499|TECTB|6975|tectorin beta	AF312827|TECTB|6975|tectorin beta	HQ258194|TECTB|6975|tectorin beta	NM_058222|TECTB|6975|tectorin beta
hg19_v1_chr7_-_14029641_14029641	0.112319	SOX2.p2	NM_001163147|ETV1|2115|ets variant 1	NM_004956|ETV1|2115|ets variant 1
hg19_v1_chr5_-_134734886_134734891	0.112141	SOX2.p2	BC095406|H2AFY|9555|H2A histone family, member Y
hg19_v1_chr1_-_52521046_52521046	0.112121	SOX2.p2	AF543416|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	NM_015913|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)
hg19_v1_chr17_-_56494889_56494898	0.112067	SOX2.p2	CR749257|RNF43|54894|ring finger protein 43
hg19_v1_chrX_+_70503496_70503508	0.111864	SOX2.p2	L14599|NONO|4841|non-POU domain containing, octamer-binding	AK291140|NONO|4841|non-POU domain containing, octamer-binding	BC003129|NONO|4841|non-POU domain containing, octamer-binding
hg19_v1_chr3_+_157827937_157827944	0.111789	SOX2.p2	AK300388|RSRC1|51319|arginine/serine-rich coiled-coil 1
hg19_v1_chr2_-_55559749_55559823	0.111632	SOX2.p2	BC056885|CCDC88A|55704|coiled-coil domain containing 88A
hg19_v1_chr14_-_23652840_23652905	0.111565	SOX2.p2	AL365342|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8	NM_012244|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8	Y18483|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8	AL365346|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8	AK223610|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8
hg19_v1_chr12_-_6716475_6716528	0.111557	SOX2.p2	X86691|CHD4|1108|chromodomain helicase DNA binding protein 4	BC014964|CHD4|1108|chromodomain helicase DNA binding protein 4	BC025962|CHD4|1108|chromodomain helicase DNA binding protein 4	BC038596|CHD4|1108|chromodomain helicase DNA binding protein 4
hg19_v1_chr10_+_45455149_45455315	0.111545	SOX2.p2	AY216713|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AY216714|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AY216715|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AY216716|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	NM_032023|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	BC032593|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AF260335|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AK311531|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4
hg19_v1_chr6_-_90062349_90062437	0.111479	SOX2.p2	AJ245898|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U	AF151834|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U
hg19_v1_chr6_+_25279651_25279666	0.111381	SOX2.p2	AK125696|LRRC16A|55604|leucine rich repeat containing 16A	NM_001173977|LRRC16A|55604|leucine rich repeat containing 16A	NM_017640|LRRC16A|55604|leucine rich repeat containing 16A
hg19_v1_chr13_-_46756291_46756294	0.111359	SOX2.p2	J02923|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)
hg19_v1_chr11_-_118661826_118661847	0.110969	SOX2.p2	D17532|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg19_v1_chrX_+_70503469_70503494	0.110682	SOX2.p2	AK297144|NONO|4841|non-POU domain containing, octamer-binding
hg19_v1_chr3_+_58223228_58223338	0.110528	SOX2.p2	NM_020676|ABHD6|57406|abhydrolase domain containing 6	AK225942|ABHD6|57406|abhydrolase domain containing 6	AK172797|ABHD6|57406|abhydrolase domain containing 6	AK313168|ABHD6|57406|abhydrolase domain containing 6
hg19_v1_chr1_-_205719078_205719101	0.110507	SOX2.p2	CR457339|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	DQ891218|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	DQ894401|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg19_v1_chr3_-_58563490_58563490	0.110444	SOX2.p2	AF035283|FAM107A|11170|family with sequence similarity 107, member A	NM_001076778|FAM107A|11170|family with sequence similarity 107, member A	NM_007177|FAM107A|11170|family with sequence similarity 107, member A
hg19_v1_chr5_+_140800536_140800602	0.110375	SOX2.p2	NM_018914|PCDHGA11|56105|protocadherin gamma subfamily A, 11	NM_032091|PCDHGA11|56105|protocadherin gamma subfamily A, 11	NM_032092|PCDHGA11|56105|protocadherin gamma subfamily A, 11
hg19_v1_chr5_+_112073555_112073591	0.110211	SOX2.p2	NM_000038|APC|324|adenomatous polyposis coli	NM_001127510|APC|324|adenomatous polyposis coli	BC034955|APC|324|adenomatous polyposis coli	BC056268|APC|324|adenomatous polyposis coli	AB210001|APC|324|adenomatous polyposis coli
hg19_v1_chr17_+_7184978_7185253	0.110167	SOX2.p2	AK313372|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4	BC034387|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4	NM_001042|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4	M20747|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4	BC069615|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4	BC069621|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4	BC113592|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4	BC126164|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4	HQ258267|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4
hg19_v1_chr6_+_56911310_56911383	0.110042	SOX2.p2	BC041125|KIAA1586|57691|KIAA1586	NM_020931|KIAA1586|57691|KIAA1586
hg19_v1_chr5_-_176738831_176738938	0.109968	SOX2.p2	DQ892734|MXD3|83463|MAX dimerization protein 3	DQ895981|MXD3|83463|MAX dimerization protein 3	DQ896213|MXD3|83463|MAX dimerization protein 3	BC041690|MXD3|83463|MAX dimerization protein 3	BC000745|MXD3|83463|MAX dimerization protein 3	BC032586|MXD3|83463|MAX dimerization protein 3	AF114834|MXD3|83463|MAX dimerization protein 3	AK222579|MXD3|83463|MAX dimerization protein 3	AK316468|MXD3|83463|MAX dimerization protein 3	AK057034|MXD3|83463|MAX dimerization protein 3	AK303397|MXD3|83463|MAX dimerization protein 3
hg19_v1_chr5_+_57878901_57878938	0.109852	SOX2.p2	AY026936|RAB3C|115827|RAB3C, member RAS oncogene family	BC013033|RAB3C|115827|RAB3C, member RAS oncogene family	NM_138453|RAB3C|115827|RAB3C, member RAS oncogene family
hg19_v1_chr5_-_140700286_140700333	0.109792	SOX2.p2	U18062|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	BC032737|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	X97999|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	BC022798|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	BC013397|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	AK314837|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa
hg19_v1_chr10_+_104263716_104263723	0.109668	SOX2.p2	NM_001178133|SUFU|51684|suppressor of fused homolog (Drosophila)	NM_016169|SUFU|51684|suppressor of fused homolog (Drosophila)
hg19_v1_chr5_+_140501399_140501421	0.109665	SOX2.p2	AK313640|PCDHB4|56131|protocadherin beta 4
hg19_v1_chr3_-_93781659_93781830	0.109445	SOX2.p2	BC045541|DHFRL1|200895|dihydrofolate reductase-like 1	AL832912|DHFRL1|200895|dihydrofolate reductase-like 1	BC063379|DHFRL1|200895|dihydrofolate reductase-like 1	NM_176815|DHFRL1|200895|dihydrofolate reductase-like 1
hg19_v1_chr17_+_48638339_48638448	0.109082	SOX2.p2	BC110995|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	AF124351|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_018896|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198376|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198377|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198378|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198379|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198380|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198382|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198383|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198384|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198385|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198386|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198387|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198388|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198396|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit	NM_198397|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit
hg19_v1_chr14_+_103800534_103800546	0.10851	SOX2.p2	AL080102|EIF5|1983|eukaryotic translation initiation factor 5	AK026933|EIF5|1983|eukaryotic translation initiation factor 5
hg19_v1_chr15_-_55700456_55700707	0.108468	SOX2.p2	AK292795|CCPG1|9236|cell cycle progression 1	BC039871|CCPG1|9236|cell cycle progression 1	BC027621|CCPG1|9236|cell cycle progression 1	AB033080|CCPG1|9236|cell cycle progression 1	AK022459|CCPG1|9236|cell cycle progression 1	BC015203|CCPG1|9236|cell cycle progression 1	NM_004748|CCPG1|9236|cell cycle progression 1	NM_001204450|CCPG1|9236|cell cycle progression 1	NM_001204451|CCPG1|9236|cell cycle progression 1	NM_020739|CCPG1|9236|cell cycle progression 1
hg19_v1_chr9_-_128003634_128003794	0.108419	SOX2.p2	NM_005347|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
hg19_v1_chr2_+_148602300_148602371	0.108407	SOX2.p2	AK314124|ACVR2A|92|activin A receptor, type IIA
hg19_v1_chr12_+_109490339_109490510	0.108398	SOX2.p2	NM_032663|USP30|84749|ubiquitin specific peptidase 30	BC004868|USP30|84749|ubiquitin specific peptidase 30	AJ586136|USP30|84749|ubiquitin specific peptidase 30	DQ893401|USP30|84749|ubiquitin specific peptidase 30	DQ896783|USP30|84749|ubiquitin specific peptidase 30
hg19_v1_chr4_+_184827805_184827836	0.108373	SOX2.p2	AK289840|STOX2|56977|storkhead box 2
hg19_v1_chr20_-_3762060_3762112	0.108277	SOX2.p2	BC022476|SPEF1|25876|sperm flagellar 1	AL080154|SPEF1|25876|sperm flagellar 1	EF560745|SPEF1|25876|sperm flagellar 1	NM_015417|SPEF1|25876|sperm flagellar 1	AK313766|SPEF1|25876|sperm flagellar 1
hg19_v1_chr5_+_140800613_140800794	0.108102	SOX2.p2	BC136781|PCDHGA11|56105|protocadherin gamma subfamily A, 11	BC171774|PCDHGA11|56105|protocadherin gamma subfamily A, 11	AF152320|PCDHGA11|56105|protocadherin gamma subfamily A, 11	AF152504|PCDHGA11|56105|protocadherin gamma subfamily A, 11	AF152505|PCDHGA11|56105|protocadherin gamma subfamily A, 11
hg19_v1_chr1_-_212588073_212588234	0.108051	SOX2.p2	AK295224|TMEM206|55248|transmembrane protein 206	CR457268|TMEM206|55248|transmembrane protein 206	BC006320|TMEM206|55248|transmembrane protein 206
hg19_v1_chr17_-_76921453_76921501	0.107944	SOX2.p2	BC071586|TIMP2|7077|TIMP metallopeptidase inhibitor 2	NM_003255|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg19_v1_chr15_-_73925658_73925795	0.107943	SOX2.p2	BC105979|NPTN|27020|neuroplastin	AK129908|NPTN|27020|neuroplastin	AF109126|NPTN|27020|neuroplastin	AF109127|NPTN|27020|neuroplastin	AB209812|NPTN|27020|neuroplastin	BC067828|NPTN|27020|neuroplastin	NM_001161363|NPTN|27020|neuroplastin	NM_001161364|NPTN|27020|neuroplastin	NM_012428|NPTN|27020|neuroplastin	NM_017455|NPTN|27020|neuroplastin
hg19_v1_chr17_+_55333843_55334103	0.107678	SOX2.p2	BC001526|MSI2|124540|musashi homolog 2 (Drosophila)	NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)	DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)	DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)
hg19_v1_chr13_-_50699775_50699855	0.107581	SOX2.p2	AF380424|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)
hg19_v1_chr3_-_42917191_42917469	0.107484	SOX2.p2	AF090318|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1	BC067434|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1	BC067441|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1	BC067442|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1	BC067443|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1	BC067444|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1	AK310784|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1
hg19_v1_chr17_-_56591900_56591984	0.107388	SOX2.p2	AK308877|MTMR4|9110|myotubularin related protein 4
hg19_v1_chr1_+_117602909_117602939	0.107245	SOX2.p2	AK291017|TTF2|8458|transcription termination factor, RNA polymerase II
hg19_v1_chr5_+_156820161_156820216	0.107128	SOX2.p2	AK172724|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2
hg19_v1_chr4_-_24586145_24586175	0.106882	SOX2.p2	AK303506|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15	BC035974|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg19_v1_chr14_-_21852085_21852160	0.106627	SOX2.p2	BC012582|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	BC064561|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	BC073849|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	AK001719|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)
hg19_v1_chr17_+_65373574_65373603	0.106285	SOX2.p2	AK290838|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1
hg19_v1_chr8_-_65711104_65711455	0.106125	SOX2.p2	BC029155|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1	AF029403|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1	AF127090|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1	BC136574|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1	NM_004820|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1
hg19_v1_chr1_-_183559669_183559758	0.106121	SOX2.p2	BC001606|NCF2|4688|neutrophil cytosolic factor 2	NM_000433|NCF2|4688|neutrophil cytosolic factor 2	NM_001190789|NCF2|4688|neutrophil cytosolic factor 2	NM_001190794|NCF2|4688|neutrophil cytosolic factor 2
hg19_v1_chr1_-_31712399_31712481	0.106084	SOX2.p2	AK299507|NKAIN1|79570|Na+/K+ transporting ATPase interacting 1
hg19_v1_chr22_+_21821458_21821458	0.106017	SOX2.p2	NM_001207052|TMEM191C|645426|transmembrane protein 191C
hg19_v1_chr19_-_7990974_7991058	0.105453	SOX2.p2	BC062702|CTXN1|404217|cortexin 1	AK098834|CTXN1|404217|cortexin 1	NM_206833|CTXN1|404217|cortexin 1
hg19_v1_chr11_-_118661587_118661679	0.105397	SOX2.p2	BC065007|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6	AK313244|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg19_v1_chr6_+_18155535_18155776	0.105302	SOX2.p2	BC113093|KDM1B|221656|lysine (K)-specific demethylase 1B	NM_153042|KDM1B|221656|lysine (K)-specific demethylase 1B	AK125318|KDM1B|221656|lysine (K)-specific demethylase 1B
hg19_v1_chr11_+_34460421_34460528	0.105289	SOX2.p2	AK291585|CAT|847|catalase	NM_001752|CAT|847|catalase	BC110398|CAT|847|catalase	AK315350|CAT|847|catalase	X04076|CAT|847|catalase	BC112217|CAT|847|catalase	BC112219|CAT|847|catalase
hg19_v1_chr8_+_120885899_120886110	0.105033	SOX2.p2	NM_022783|DEPTOR|64798|DEP domain containing MTOR-interacting protein	AK315175|DEPTOR|64798|DEP domain containing MTOR-interacting protein	AK225168|DEPTOR|64798|DEP domain containing MTOR-interacting protein	AK297822|DEPTOR|64798|DEP domain containing MTOR-interacting protein	AL136678|DEPTOR|64798|DEP domain containing MTOR-interacting protein	AK225675|DEPTOR|64798|DEP domain containing MTOR-interacting protein	BC024746|DEPTOR|64798|DEP domain containing MTOR-interacting protein	AK022490|DEPTOR|64798|DEP domain containing MTOR-interacting protein	BC012040|DEPTOR|64798|DEP domain containing MTOR-interacting protein	AM392576|DEPTOR|64798|DEP domain containing MTOR-interacting protein	AM393333|DEPTOR|64798|DEP domain containing MTOR-interacting protein	AK023916|DEPTOR|64798|DEP domain containing MTOR-interacting protein
hg19_v1_chr16_-_71318761_71318859	0.104997	SOX2.p2	AK000289|FTSJD1|55783|FtsJ methyltransferase domain containing 1
hg19_v1_chr6_-_107435635_107435635	0.104988	SOX2.p2	BC131628|BEND3|57673|BEN domain containing 3	NM_001080450|BEND3|57673|BEN domain containing 3
hg19_v1_chr12_-_56753856_56753911	0.104939	SOX2.p2	BC051284|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	M97934|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	AK310727|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	AK296939|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	AK296940|STAT2|6773|signal transducer and activator of transcription 2, 113kDa
hg19_v1_chr17_+_74864427_74864905	0.104923	SOX2.p2	AB235153|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B	BC041577|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B	NM_001199172|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B	NM_144677|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B	BC062354|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B
hg19_v1_chr12_+_72079873_72079886	0.104867	SOX2.p2	BC008596|TMEM19|55266|transmembrane protein 19	NM_018279|TMEM19|55266|transmembrane protein 19
hg19_v1_chr16_-_72206348_72206348	0.104338	SOX2.p2	AK122925|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	NM_001160213|PMFBP1|83449|polyamine modulated factor 1 binding protein 1
hg19_v1_chr13_+_52586516_52586554	0.104159	SOX2.p2	NM_001004127|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC142998|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	AK296747|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC108677|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC111022|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	AK025456|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC143059|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC150316|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)
hg19_v1_chr7_-_99679192_99679462	0.10415	SOX2.p2	BC011887|ZNF3|7551|zinc finger protein 3	BC025265|ZNF3|7551|zinc finger protein 3	BC013603|ZNF3|7551|zinc finger protein 3	AK297625|ZNF3|7551|zinc finger protein 3	AF193057|ZNF3|7551|zinc finger protein 3	AF217988|ZNF3|7551|zinc finger protein 3	AK315479|ZNF3|7551|zinc finger protein 3	AK091984|ZNF3|7551|zinc finger protein 3	NM_017715|ZNF3|7551|zinc finger protein 3	NM_032924|ZNF3|7551|zinc finger protein 3
hg19_v1_chr1_-_21113147_21113158	0.104128	SOX2.p2	AK291252|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg19_v1_chr5_-_101631965_101632252	0.104085	SOX2.p2	AF401643|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1	AK128854|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1	BX647349|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1	AY273896|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1	NM_180991|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1
hg19_v1_chr9_-_123837410_123837451	0.104054	SOX2.p2	AB209031|C5|727|complement component 5
hg19_v1_chr2_-_37076016_37076045	0.10404	SOX2.p2	BC015406|STRN|6801|striatin, calmodulin binding protein
hg19_v1_chr16_-_46782104_46782220	0.10394	SOX2.p2	AB451455|MYLK3|91807|myosin light chain kinase 3	BC109096|MYLK3|91807|myosin light chain kinase 3	BC109097|MYLK3|91807|myosin light chain kinase 3	AJ247087|MYLK3|91807|myosin light chain kinase 3	NM_182493|MYLK3|91807|myosin light chain kinase 3
hg19_v1_chr19_-_42806928_42806954	0.103692	SOX2.p2	NM_001145939|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	NM_001145940|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg19_v1_chr12_+_53846086_53846147	0.1035	SOX2.p2	AK292141|PCBP2|5094|poly(rC) binding protein 2	BC001155|PCBP2|5094|poly(rC) binding protein 2
hg19_v1_chr19_-_6459576_6459667	0.103496	SOX2.p2	AK294514|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
hg19_v1_chr15_+_42566365_42566677	0.103468	SOX2.p2	NM_198141|GANC|2595|glucosidase, alpha; neutral C	AK301467|GANC|2595|glucosidase, alpha; neutral C	AK074037|GANC|2595|glucosidase, alpha; neutral C	BC059406|GANC|2595|glucosidase, alpha; neutral C	BC093833|GANC|2595|glucosidase, alpha; neutral C	BC112051|GANC|2595|glucosidase, alpha; neutral C	AF545045|GANC|2595|glucosidase, alpha; neutral C	AF545046|GANC|2595|glucosidase, alpha; neutral C	AM392591|GANC|2595|glucosidase, alpha; neutral C	AM393467|GANC|2595|glucosidase, alpha; neutral C	BC151223|GANC|2595|glucosidase, alpha; neutral C
hg19_v1_chr4_+_15683265_15683388	0.103456	SOX2.p2	NM_001145191|FAM200B|285550|family with sequence similarity 200, member B	BC048993|FAM200B|285550|family with sequence similarity 200, member B
hg19_v1_chr5_-_140700339_140700365	0.103407	SOX2.p2	NM_005642|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa
hg19_v1_chr8_+_110346549_110346637	0.103357	SOX2.p2	NM_001193557|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	NM_020189|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK095651|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK316560|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK000487|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK290752|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	BC051878|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	BC007870|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)
hg19_v1_chr9_+_116356407_116356556	0.103239	SOX2.p2	BC018072|RGS3|5998|regulator of G-protein signaling 3	BC019039|RGS3|5998|regulator of G-protein signaling 3
hg19_v1_chrX_-_128977291_128977560	0.103205	SOX2.p2	AK001524|ZDHHC9|51114|zinc finger, DHHC-type containing 9	BC000035|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AB209807|ZDHHC9|51114|zinc finger, DHHC-type containing 9	NM_001008222|ZDHHC9|51114|zinc finger, DHHC-type containing 9
hg19_v1_chr22_-_31741565_31741686	0.103138	SOX2.p2	AL096880|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF242522|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	CR456613|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1
hg19_v1_chr13_-_74708361_74708431	0.102822	SOX2.p2	AK291397|KLF12|11278|Kruppel-like factor 12
hg19_v1_chr18_+_72998258_72998426	0.102721	SOX2.p2	AK223545|TSHZ1|10194|teashirt zinc finger homeobox 1	BC024152|TSHZ1|10194|teashirt zinc finger homeobox 1
hg19_v1_chr15_-_52529704_52529708	0.102568	SOX2.p2	AF161352|MYO5C|55930|myosin VC
hg19_v1_chr1_+_36748164_36748236	0.10233	SOX2.p2	EU446755|THRAP3|9967|thyroid hormone receptor associated protein 3
hg19_v1_chr9_-_34620499_34620533	0.102309	SOX2.p2	AK091661|DCTN3|11258|dynactin 3 (p22)
hg19_v1_chr2_+_211421322_211421457	0.102079	SOX2.p2	NM_001875|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AK289749|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	BC020695|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	BC058010|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AF154830|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	D90282|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	BC140943|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180933|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180934|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180935|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180936|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180937|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180938|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	Y15793|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial
hg19_v1_chrX_-_16888442_16888460	0.101913	SOX2.p2	X72841|RBBP7|5931|retinoblastoma binding protein 7
hg19_v1_chr1_+_50569581_50569581	0.101696	SOX2.p2	AY033995|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001144776|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg19_v1_chr9_-_14398981_14398981	0.101595	SOX2.p2	AK131233|NFIB|4781|nuclear factor I/B	NM_001190738|NFIB|4781|nuclear factor I/B
hg19_v1_chr9_+_140083053_140083199	0.101491	SOX2.p2	NM_003731|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	BC000864|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	BC004118|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	Z96932|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	BT006766|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	CR542238|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	BC015827|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1
hg19_v1_chr1_+_145438437_145438915	0.101436	SOX2.p2	NM_006472|TXNIP|10628|thioredoxin interacting protein	AK301203|TXNIP|10628|thioredoxin interacting protein	BX537824|TXNIP|10628|thioredoxin interacting protein	AK226090|TXNIP|10628|thioredoxin interacting protein	S73591|TXNIP|10628|thioredoxin interacting protein	BC093702|TXNIP|10628|thioredoxin interacting protein	BC093704|TXNIP|10628|thioredoxin interacting protein	AY594328|TXNIP|10628|thioredoxin interacting protein	BC024305|TXNIP|10628|thioredoxin interacting protein	AK301148|TXNIP|10628|thioredoxin interacting protein
hg19_v1_chr20_-_36152952_36152952	0.101392	SOX2.p2	NM_001167823|BLCAP|10904|bladder cancer associated protein
hg19_v1_chr16_-_79634610_79634621	0.101348	SOX2.p2	AF055376|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)	AF055377|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)	BC038438|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)	NM_001031804|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)	NM_005360|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)
hg19_v1_chr20_+_2903852_2903911	0.101315	SOX2.p2	NM_080841|PTPRA|5786|protein tyrosine phosphatase, receptor type, A	X53364|PTPRA|5786|protein tyrosine phosphatase, receptor type, A
hg19_v1_chr1_+_100818007_100818027	0.101309	SOX2.p2	NM_003672|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	NM_033312|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	NM_033313|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)
hg19_v1_chr11_+_117103237_117103629	0.101298	SOX2.p2	NM_207343|RNF214|257160|ring finger protein 214	AK298923|RNF214|257160|ring finger protein 214	BC064581|RNF214|257160|ring finger protein 214	AK300160|RNF214|257160|ring finger protein 214	BC146891|RNF214|257160|ring finger protein 214	BC146901|RNF214|257160|ring finger protein 214	NM_001077239|RNF214|257160|ring finger protein 214
hg19_v1_chr3_+_156008775_156008845	0.101225	SOX2.p2	NM_172159|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1	BC043166|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1	AK127240|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1
hg19_v1_chr8_+_82192717_82192830	0.101154	SOX2.p2	NM_001444|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	AK226036|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	AK311856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	BC070303|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	BC019385|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	M94856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	DQ891285|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	DQ894470|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	BT007449|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)
hg19_v1_chr12_-_11036815_11036873	0.101036	SOX2.p2	BC128192|PRH1|5554|proline-rich protein HaeIII subfamily 1	BC133676|PRH1|5554|proline-rich protein HaeIII subfamily 1	K03203|PRH1|5554|proline-rich protein HaeIII subfamily 1	NM_006250|PRH1|5554|proline-rich protein HaeIII subfamily 1
hg19_v1_chr14_+_24521099_24521253	0.101013	SOX2.p2	NM_138360|LRRC16B|90668|leucine rich repeat containing 16B
hg19_v1_chr4_+_15683402_15683503	0.100988	SOX2.p2	BC035074|FAM200B|285550|family with sequence similarity 200, member B
hg19_v1_chr17_+_26699093_26699125	0.100734	SOX2.p2	BC040429|SARM1|23098|sterile alpha and TIR motif containing 1	AJ290445|SARM1|23098|sterile alpha and TIR motif containing 1	BC122860|SARM1|23098|sterile alpha and TIR motif containing 1
hg19_v1_chr9_-_86082656_86082663	0.100664	SOX2.p2	NM_001244960|FRMD3|257019|FERM domain containing 3	AY137774|FRMD3|257019|FERM domain containing 3
hg19_v1_chr12_-_752795_752844	0.100482	SOX2.p2	
hg19_v1_chr11_-_101787252_101787252	0.100456	SOX2.p2	BC049170|ANGPTL5|253935|angiopoietin-like 5	BC053957|ANGPTL5|253935|angiopoietin-like 5	NM_178127|ANGPTL5|253935|angiopoietin-like 5
hg19_v1_chr15_-_56035176_56035277	0.100365	SOX2.p2	AY630258|PRTG|283659|protogenin	NM_173814|PRTG|283659|protogenin
hg19_v1_chr6_-_105307708_105307742	0.100028	SOX2.p2	AK291760|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1
hg19_v1_chr16_+_68573660_68573660	0.100027	SOX2.p2	NM_133458|ZFP90|146198|zinc finger protein 90 homolog (mouse)
hg19_v1_chr13_-_38443859_38443938	0.0999673	SOX2.p2	BC104725|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	BC105306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	BC105641|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	BC105917|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AK312524|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF175406|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF063822|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF063823|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF063824|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF063825|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_001135955|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_001135956|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_001135957|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_001135958|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_003306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_016179|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4
hg19_v1_chr6_+_56911422_56911552	0.0998943	SOX2.p2	BC012011|KIAA1586|57691|KIAA1586	BC029372|KIAA1586|57691|KIAA1586	AK295519|KIAA1586|57691|KIAA1586	AK290988|KIAA1586|57691|KIAA1586
hg19_v1_chr15_+_58724174_58724231	0.0998698	SOX2.p2	NM_000236|LIPC|3990|lipase, hepatic	X07228|LIPC|3990|lipase, hepatic	AK293324|LIPC|3990|lipase, hepatic	AK309448|LIPC|3990|lipase, hepatic	D83548|LIPC|3990|lipase, hepatic	BC132825|LIPC|3990|lipase, hepatic	BC136495|LIPC|3990|lipase, hepatic	J03895|LIPC|3990|lipase, hepatic	J03540|LIPC|3990|lipase, hepatic	HQ258274|LIPC|3990|lipase, hepatic
hg19_v1_chr6_+_142468382_142468399	0.0995504	SOX2.p2	AF151062|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AK301376|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	BC006989|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	BC022536|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)
hg19_v1_chr17_-_4269814_4270002	0.0993874	SOX2.p2	AK313059|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1	BC002775|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1	NM_003342|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1
hg19_v1_chr22_-_31742217_31742314	0.0992359	SOX2.p2	AF254082|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF254083|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF254084|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF254085|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF119256|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	NM_014323|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	NM_032050|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	NM_032051|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	NM_032052|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AB208787|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1
hg19_v1_chr16_-_1464634_1464722	0.0991039	SOX2.p2	AM944365|UNKL|64718|unkempt homolog (Drosophila)-like	BC011924|UNKL|64718|unkempt homolog (Drosophila)-like	AK124977|UNKL|64718|unkempt homolog (Drosophila)-like	NM_001037125|UNKL|64718|unkempt homolog (Drosophila)-like	NM_001193388|UNKL|64718|unkempt homolog (Drosophila)-like
hg19_v1_chr3_-_56698073_56698073	0.0990344	SOX2.p2	BC029354|FAM208A|23272|family with sequence similarity 208, member A	NM_015224|FAM208A|23272|family with sequence similarity 208, member A
hg19_v1_chr21_+_27107671_27107726	0.098659	SOX2.p2	BC035031|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa	D13318|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa	AK223164|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa
hg19_v1_chr19_+_18530423_18530457	0.0985266	SOX2.p2	
hg19_v1_chr7_-_47622127_47622246	0.098406	SOX2.p2	AB208995|TNS3|64759|tensin 3
hg19_v1_chr6_-_136610894_136610927	0.0982767	SOX2.p2	BC078160|BCLAF1|9774|BCL2-associated transcription factor 1	BC063846|BCLAF1|9774|BCL2-associated transcription factor 1	BX649160|BCLAF1|9774|BCL2-associated transcription factor 1	BC016682|BCLAF1|9774|BCL2-associated transcription factor 1
hg19_v1_chr7_+_29234111_29234135	0.0982654	SOX2.p2	NM_004067|CHN2|1124|chimerin (chimaerin) 2
hg19_v1_chr13_+_103451398_103451885	0.098093	SOX2.p2	AF411385|BIVM|54841|basic, immunoglobulin-like variable motif containing	NM_001159596|BIVM|54841|basic, immunoglobulin-like variable motif containing	NM_017693|BIVM|54841|basic, immunoglobulin-like variable motif containing	AK290658|BIVM|54841|basic, immunoglobulin-like variable motif containing	AK304391|BIVM|54841|basic, immunoglobulin-like variable motif containing	BC112339|BIVM|54841|basic, immunoglobulin-like variable motif containing
hg19_v1_chr5_+_42548144_42548144	0.0979788	SOX2.p2	NM_001242402|GHR|2690|growth hormone receptor
hg19_v1_chr16_+_67876211_67876219	0.0977342	SOX2.p2	NM_020457|THAP11|57215|THAP domain containing 11
hg19_v1_chr13_-_101327027_101327085	0.0977328	SOX2.p2	AK299859|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4	BX648008|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4	AK056409|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4	AK290345|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4	BX647956|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4
hg19_v1_chr9_+_95087740_95087740	0.097718	SOX2.p2	NM_001012267|CENPP|401541|centromere protein P
hg19_v1_chr14_+_69726680_69726680	0.097451	SOX2.p2	NM_001168368|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	NM_020692|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1
hg19_v1_chr18_-_21851902_21851921	0.0973084	SOX2.p2	AK001079|OSBPL1A|114876|oxysterol binding protein-like 1A
hg19_v1_chr2_+_219283809_219283872	0.0968928	SOX2.p2	NM_007127|VIL1|7429|villin 1	AK223398|VIL1|7429|villin 1	AK300965|VIL1|7429|villin 1	AK313709|VIL1|7429|villin 1
hg19_v1_chr8_-_82024277_82024352	0.0968435	SOX2.p2	AK289818|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1	NM_018440|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1
hg19_v1_chr6_+_83073501_83073565	0.0966369	SOX2.p2	BC037161|TPBG|7162|trophoblast glycoprotein	AK074786|TPBG|7162|trophoblast glycoprotein
hg19_v1_chr7_-_14029286_14029323	0.0966064	SOX2.p2	AB209202|ETV1|2115|ets variant 1	BC098403|ETV1|2115|ets variant 1	AK312863|ETV1|2115|ets variant 1
hg19_v1_chr9_-_36276930_36277052	0.0965762	SOX2.p2	AM697709|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	AM697708|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	AK296687|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	AK312539|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	NM_001128227|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	NM_001190388|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
hg19_v1_chr15_+_22892714_22892719	0.0965548	SOX2.p2	AY763578|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg19_v1_chr8_-_105601234_105601261	0.096501	SOX2.p2	AK299374|LRP12|29967|low density lipoprotein receptor-related protein 12	NM_001135703|LRP12|29967|low density lipoprotein receptor-related protein 12	NM_013437|LRP12|29967|low density lipoprotein receptor-related protein 12
hg19_v1_chr21_-_40720938_40721003	0.096474	SOX2.p2	BC071643|HMGN1|3150|high mobility group nucleosome binding domain 1	BC023984|HMGN1|3150|high mobility group nucleosome binding domain 1	BC072672|HMGN1|3150|high mobility group nucleosome binding domain 1	BC070154|HMGN1|3150|high mobility group nucleosome binding domain 1	BC000075|HMGN1|3150|high mobility group nucleosome binding domain 1	AB209245|HMGN1|3150|high mobility group nucleosome binding domain 1	BC106080|HMGN1|3150|high mobility group nucleosome binding domain 1	BC070153|HMGN1|3150|high mobility group nucleosome binding domain 1	J02621|HMGN1|3150|high mobility group nucleosome binding domain 1	AK315410|HMGN1|3150|high mobility group nucleosome binding domain 1
hg19_v1_chr7_+_114055048_114055146	0.0964116	SOX2.p2	AY144615|FOXP2|93986|forkhead box P2	BC018016|FOXP2|93986|forkhead box P2	NM_001172766|FOXP2|93986|forkhead box P2	NM_014491|FOXP2|93986|forkhead box P2	NM_148898|FOXP2|93986|forkhead box P2	NM_148900|FOXP2|93986|forkhead box P2
hg19_v1_chr4_+_100485239_100485239	0.0963927	SOX2.p2	AK302602|MTTP|4547|microsomal triglyceride transfer protein	NM_000253|MTTP|4547|microsomal triglyceride transfer protein
hg19_v1_chr5_+_140165875_140165875	0.096287	SOX2.p2	AF152305|PCDHA1|56147|protocadherin alpha 1	AF152479|PCDHA1|56147|protocadherin alpha 1	AF169695|PCDHA1|56147|protocadherin alpha 1	NM_018900|PCDHA1|56147|protocadherin alpha 1	NM_031410|PCDHA1|56147|protocadherin alpha 1	NM_031411|PCDHA1|56147|protocadherin alpha 1
hg19_v1_chr1_+_40942878_40942886	0.0961449	SOX2.p2	BC041873|ZNF642|339559|zinc finger protein 642
hg19_v1_chr3_-_192635933_192635949	0.0961146	SOX2.p2	BC036194|MB21D2|151963|Mab-21 domain containing 2	BC045582|MB21D2|151963|Mab-21 domain containing 2	NM_178496|MB21D2|151963|Mab-21 domain containing 2
hg19_v1_chr4_-_20985547_20985711	0.0960118	SOX2.p2	DQ148492|KCNIP4|80333|Kv channel interacting protein 4	AK294188|KCNIP4|80333|Kv channel interacting protein 4
hg19_v1_chr9_+_686640_686693	0.0958487	SOX2.p2	
hg19_v1_chr3_-_187871816_187871925	0.0958221	SOX2.p2	BC042414|LPP-AS2|339929|LPP antisense RNA 2 (non-protein coding)
hg19_v1_chr5_+_94890777_94890982	0.0958177	SOX2.p2	AK303855|ARSK|153642|arylsulfatase family, member K	AK316253|ARSK|153642|arylsulfatase family, member K	NM_198150|ARSK|153642|arylsulfatase family, member K	AY358596|ARSK|153642|arylsulfatase family, member K	BC050392|ARSK|153642|arylsulfatase family, member K	BC130329|ARSK|153642|arylsulfatase family, member K	BC144160|ARSK|153642|arylsulfatase family, member K	BC144161|ARSK|153642|arylsulfatase family, member K	BC036047|ARSK|153642|arylsulfatase family, member K	AY875939|ARSK|153642|arylsulfatase family, member K	HQ258292|ARSK|153642|arylsulfatase family, member K
hg19_v1_chr12_+_22199219_22199239	0.0955463	SOX2.p2	AF271388|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase	AF397212|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase
hg19_v1_chr11_-_124180661_124180732	0.0953435	SOX2.p2	AF238489|OR8D1|283159|olfactory receptor, family 8, subfamily D, member 1	NM_001002917|OR8D1|283159|olfactory receptor, family 8, subfamily D, member 1	BC136950|OR8D1|283159|olfactory receptor, family 8, subfamily D, member 1	BC136954|OR8D1|283159|olfactory receptor, family 8, subfamily D, member 1
hg19_v1_chr1_+_29241002_29241160	0.0951831	SOX2.p2	NM_001166006|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)	BC039079|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)	AK310655|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)
hg19_v1_chr8_-_105601124_105601226	0.0950896	SOX2.p2	DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12	DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12	BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12	AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12	AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12	CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12	AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12
hg19_v1_chrX_+_135579237_135579398	0.0949444	SOX2.p2	AB209303|HTATSF1|27336|HIV-1 Tat specific factor 1	NM_001163280|HTATSF1|27336|HIV-1 Tat specific factor 1
hg19_v1_chr2_-_100722328_100722589	0.0949262	SOX2.p2	AK297407|AFF3|3899|AF4/FMR2 family, member 3	AK092327|AFF3|3899|AF4/FMR2 family, member 3
hg19_v1_chr2_+_201997687_201997758	0.094922	SOX2.p2	NM_001202518|CFLAR|8837|CASP8 and FADD-like apoptosis regulator	AK304585|CFLAR|8837|CASP8 and FADD-like apoptosis regulator	AF041462|CFLAR|8837|CASP8 and FADD-like apoptosis regulator
hg19_v1_chr12_+_100661203_100661548	0.0948951	SOX2.p2	AK292980|SCYL2|55681|SCY1-like 2 (S. cerevisiae)	BC063798|SCYL2|55681|SCY1-like 2 (S. cerevisiae)	NM_017988|SCYL2|55681|SCY1-like 2 (S. cerevisiae)
hg19_v1_chr9_-_74383301_74383855	0.0948034	SOX2.p2	BC140773|TMEM2|23670|transmembrane protein 2	BC144510|TMEM2|23670|transmembrane protein 2	BC171782|TMEM2|23670|transmembrane protein 2	AB037833|TMEM2|23670|transmembrane protein 2	BC146780|TMEM2|23670|transmembrane protein 2	AF137030|TMEM2|23670|transmembrane protein 2	AK300405|TMEM2|23670|transmembrane protein 2	NM_001135820|TMEM2|23670|transmembrane protein 2	NM_013390|TMEM2|23670|transmembrane protein 2
hg19_v1_chr15_-_64995346_64995374	0.0947643	SOX2.p2	BC119629|OAZ2|4947|ornithine decarboxylase antizyme 2	BC119630|OAZ2|4947|ornithine decarboxylase antizyme 2	BC148316|OAZ2|4947|ornithine decarboxylase antizyme 2	BC127630|OAZ2|4947|ornithine decarboxylase antizyme 2	BC127631|OAZ2|4947|ornithine decarboxylase antizyme 2	AF242520|OAZ2|4947|ornithine decarboxylase antizyme 2	AF242521|OAZ2|4947|ornithine decarboxylase antizyme 2
hg19_v1_chr20_+_306205_306268	0.0943735	SOX2.p2	BC067361|SOX12|6666|SRY (sex determining region Y)-box 12	NM_006943|SOX12|6666|SRY (sex determining region Y)-box 12	U35612|SOX12|6666|SRY (sex determining region Y)-box 12	BC028103|SOX12|6666|SRY (sex determining region Y)-box 12
hg19_v1_chr2_+_201676659_201676662	0.0943578	SOX2.p2	AK223245|BZW1|9689|basic leucine zipper and W2 domains 1	BC026303|BZW1|9689|basic leucine zipper and W2 domains 1
hg19_v1_chr6_-_2751153_2751199	0.0942699	SOX2.p2	BX647582|MYLK4|340156|myosin light chain kinase family, member 4	NM_001012418|MYLK4|340156|myosin light chain kinase family, member 4	AK096893|MYLK4|340156|myosin light chain kinase family, member 4
hg19_v1_chr10_-_33623299_33623608	0.0942379	SOX2.p2	AF016050|NRP1|8829|neuropilin 1	AF018956|NRP1|8829|neuropilin 1	AF145712|NRP1|8829|neuropilin 1	AF280547|NRP1|8829|neuropilin 1	AY249243|NRP1|8829|neuropilin 1	BT006995|NRP1|8829|neuropilin 1	EU831654|NRP1|8829|neuropilin 1	EU831737|NRP1|8829|neuropilin 1	AF268691|NRP1|8829|neuropilin 1	BC007737|NRP1|8829|neuropilin 1	AB209641|NRP1|8829|neuropilin 1	AK292822|NRP1|8829|neuropilin 1	AL833608|NRP1|8829|neuropilin 1	BC007533|NRP1|8829|neuropilin 1
hg19_v1_chr17_+_15602890_15603036	0.0939719	SOX2.p2	NM_001130842|ZNF286A|57335|zinc finger protein 286A	NM_020652|ZNF286A|57335|zinc finger protein 286A
hg19_v1_chr6_+_71123105_71123122	0.0939375	SOX2.p2	NM_001105531|FAM135A|57579|family with sequence similarity 135, member A	NM_020819|FAM135A|57579|family with sequence similarity 135, member A
hg19_v1_chr18_+_29027731_29027757	0.0938592	SOX2.p2	AK290367|DSG3|1830|desmoglein 3	NM_001944|DSG3|1830|desmoglein 3	M76482|DSG3|1830|desmoglein 3
hg19_v1_chr1_-_109935869_109935978	0.0938295	SOX2.p2	AK310147|SORT1|6272|sortilin 1	AK301548|SORT1|6272|sortilin 1	NM_001205228|SORT1|6272|sortilin 1
hg19_v1_chr6_-_105307747_105307778	0.0937737	SOX2.p2	BC038119|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	BC034982|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1
hg19_v1_chr5_+_65222494_65222554	0.0936795	SOX2.p2	AF276423|ERBB2IP|55914|erbb2 interacting protein	BC050692|ERBB2IP|55914|erbb2 interacting protein
hg19_v1_chr6_-_52860076_52860179	0.0936574	SOX2.p2	AK315369|GSTA4|2941|glutathione S-transferase alpha 4	AF020918|GSTA4|2941|glutathione S-transferase alpha 4	AF025887|GSTA4|2941|glutathione S-transferase alpha 4	BC096817|GSTA4|2941|glutathione S-transferase alpha 4	NM_001512|GSTA4|2941|glutathione S-transferase alpha 4
hg19_v1_chr7_+_114066554_114066706	0.0936161	SOX2.p2	AF467253|FOXP2|93986|forkhead box P2	NM_001172767|FOXP2|93986|forkhead box P2	NM_148899|FOXP2|93986|forkhead box P2	AF467258|FOXP2|93986|forkhead box P2	AF467259|FOXP2|93986|forkhead box P2
hg19_v1_chr5_+_140201221_140201360	0.0935967	SOX2.p2	BC033735|PCDHA5|56143|protocadherin alpha 5	AF152313|PCDHA5|56143|protocadherin alpha 5	AF152483|PCDHA5|56143|protocadherin alpha 5	NM_018908|PCDHA5|56143|protocadherin alpha 5	NM_031501|PCDHA5|56143|protocadherin alpha 5
hg19_v1_chr6_+_25962978_25963089	0.0935079	SOX2.p2	BX640949|TRIM38|10475|tripartite motif containing 38	AK313248|TRIM38|10475|tripartite motif containing 38	BC026930|TRIM38|10475|tripartite motif containing 38	NM_006355|TRIM38|10475|tripartite motif containing 38	AB209906|TRIM38|10475|tripartite motif containing 38
hg19_v1_chr17_+_4046941_4047078	0.093481	SOX2.p2	AK313088|CYB5D2|124936|cytochrome b5 domain containing 2	AK172844|CYB5D2|124936|cytochrome b5 domain containing 2	BC020263|CYB5D2|124936|cytochrome b5 domain containing 2	DQ891696|CYB5D2|124936|cytochrome b5 domain containing 2	DQ894877|CYB5D2|124936|cytochrome b5 domain containing 2
hg19_v1_chr17_-_27045172_27045285	0.0933144	SOX2.p2	AF327350|RAB34|83871|RAB34, member RAS oncogene family	AK297850|RAB34|83871|RAB34, member RAS oncogene family	AK027312|RAB34|83871|RAB34, member RAS oncogene family	AJ277106|RAB34|83871|RAB34, member RAS oncogene family	AK304633|RAB34|83871|RAB34, member RAS oncogene family	BC066904|RAB34|83871|RAB34, member RAS oncogene family	NM_001142624|RAB34|83871|RAB34, member RAS oncogene family	NM_001142625|RAB34|83871|RAB34, member RAS oncogene family	NM_001144943|RAB34|83871|RAB34, member RAS oncogene family
hg19_v1_chr1_+_53527723_53527759	0.0932306	SOX2.p2	NM_001199080|PODN|127435|podocan	NM_001199082|PODN|127435|podocan	NM_153703|PODN|127435|podocan
hg19_v1_chr11_+_27015627_27015658	0.0931539	SOX2.p2	NM_203371|FIBIN|387758|fin bud initiation factor homolog (zebrafish)
hg19_v1_chr13_-_99910548_99910681	0.0931199	SOX2.p2	AF261135|GPR18|2841|G protein-coupled receptor 18	BC050646|GPR18|2841|G protein-coupled receptor 18	AF339781|GPR18|2841|G protein-coupled receptor 18	BC008569|GPR18|2841|G protein-coupled receptor 18	NM_001098200|GPR18|2841|G protein-coupled receptor 18	NM_005292|GPR18|2841|G protein-coupled receptor 18
hg19_v1_chr4_-_21699317_21699317	0.0930366	SOX2.p2	BX648990|KCNIP4|80333|Kv channel interacting protein 4	DQ148490|KCNIP4|80333|Kv channel interacting protein 4	NM_001035003|KCNIP4|80333|Kv channel interacting protein 4
hg19_v1_chr16_+_67876381_67876584	0.0929016	SOX2.p2	L10378|THAP11|57215|THAP domain containing 11	L10379|THAP11|57215|THAP domain containing 11	DQ892600|THAP11|57215|THAP domain containing 11	DQ895831|THAP11|57215|THAP domain containing 11	EF036502|THAP11|57215|THAP domain containing 11
hg19_v1_chr5_+_65222560_65222600	0.0928973	SOX2.p2	BC126464|ERBB2IP|55914|erbb2 interacting protein	BC144075|ERBB2IP|55914|erbb2 interacting protein
hg19_v1_chr1_-_183559463_183559654	0.0928677	SOX2.p2	BT007439|NCF2|4688|neutrophil cytosolic factor 2	DQ893650|NCF2|4688|neutrophil cytosolic factor 2	DQ895812|NCF2|4688|neutrophil cytosolic factor 2	AF527950|NCF2|4688|neutrophil cytosolic factor 2	AK296672|NCF2|4688|neutrophil cytosolic factor 2	AK312666|NCF2|4688|neutrophil cytosolic factor 2	AK298713|NCF2|4688|neutrophil cytosolic factor 2
hg19_v1_chr7_-_23571443_23571685	0.0928214	SOX2.p2	DQ892442|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	DQ895653|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	BC069011|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	BC017094|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	U53209|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	AB097048|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	AK300565|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	AK311687|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	AK314801|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	AK300741|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	AK310719|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	AK298815|TRA2A|29896|transformer 2 alpha homolog (Drosophila)	NM_013293|TRA2A|29896|transformer 2 alpha homolog (Drosophila)
hg19_v1_chr19_-_53233134_53233134	0.0926967	SOX2.p2	AK097434|ZNF611|81856|zinc finger protein 611	NM_030972|ZNF611|81856|zinc finger protein 611
hg19_v1_chr16_-_21663908_21663933	0.0924807	SOX2.p2	DQ892013|IGSF6|10261|immunoglobulin superfamily, member 6	DQ895202|IGSF6|10261|immunoglobulin superfamily, member 6	EU176227|IGSF6|10261|immunoglobulin superfamily, member 6	EU176324|IGSF6|10261|immunoglobulin superfamily, member 6	AK313860|IGSF6|10261|immunoglobulin superfamily, member 6	AK223286|IGSF6|10261|immunoglobulin superfamily, member 6	AK290910|IGSF6|10261|immunoglobulin superfamily, member 6	AK293703|IGSF6|10261|immunoglobulin superfamily, member 6	BC017844|IGSF6|10261|immunoglobulin superfamily, member 6
hg19_v1_chr20_+_42194736_42194736	0.0924705	SOX2.p2	AF186470|SGK2|10110|serum/glucocorticoid regulated kinase 2	NM_016276|SGK2|10110|serum/glucocorticoid regulated kinase 2
hg19_v1_chr2_-_109150596_109150695	0.0923328	SOX2.p2	BC004487|FLJ38668|644903|uncharacterized LOC644903	AK095987|FLJ38668|644903|uncharacterized LOC644903
hg19_v1_chr17_-_67057046_67057135	0.0922798	SOX2.p2	BC062472|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	AK057068|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	AY028899|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	NM_080283|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9
hg19_v1_chr14_-_75600111_75600130	0.0922511	SOX2.p2	AK023615|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)
hg19_v1_chr19_-_48673559_48673604	0.0922243	SOX2.p2	M36067|LIG1|3978|ligase I, DNA, ATP-dependent	NM_000234|LIG1|3978|ligase I, DNA, ATP-dependent	AK314210|LIG1|3978|ligase I, DNA, ATP-dependent	AK297296|LIG1|3978|ligase I, DNA, ATP-dependent	AK303644|LIG1|3978|ligase I, DNA, ATP-dependent	AB208791|LIG1|3978|ligase I, DNA, ATP-dependent	AK225863|LIG1|3978|ligase I, DNA, ATP-dependent	AK300370|LIG1|3978|ligase I, DNA, ATP-dependent
hg19_v1_chr22_-_36903086_36903149	0.0922018	SOX2.p2	AK025714|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	AK225347|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	AK315555|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	NM_024955|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	BC040351|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	NM_001102371|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2
hg19_v1_chr2_+_173292344_173292614	0.092039	SOX2.p2	X53586|ITGA6|3655|integrin, alpha 6	BC136455|ITGA6|3655|integrin, alpha 6	BC136456|ITGA6|3655|integrin, alpha 6	X59512|ITGA6|3655|integrin, alpha 6	AB208842|ITGA6|3655|integrin, alpha 6
hg19_v1_chr14_+_20923341_20923355	0.0919882	SOX2.p2	AK098588|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1
hg19_v1_chr11_-_57089670_57089823	0.0919784	SOX2.p2	AF441771|TNKS1BP1|85456|tankyrase 1 binding protein 1, 182kDa
hg19_v1_chr7_+_156803599_156803613	0.0917578	SOX2.p2	BC022831|LOC645249|645249|uncharacterized LOC645249	BC033117|LOC645249|645249|uncharacterized LOC645249
hg19_v1_chr2_+_231921595_231921607	0.0913511	SOX2.p2	BC064398|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
hg19_v1_chr5_+_34656367_34656459	0.0913473	SOX2.p2	NM_001145522|RAI14|26064|retinoic acid induced 14	NM_015577|RAI14|26064|retinoic acid induced 14
hg19_v1_chr5_+_140723600_140723602	0.0910339	SOX2.p2	AF152323|PCDHGA3|56112|protocadherin gamma subfamily A, 3	AF152509|PCDHGA3|56112|protocadherin gamma subfamily A, 3	AF152510|PCDHGA3|56112|protocadherin gamma subfamily A, 3	BC115408|PCDHGA3|56112|protocadherin gamma subfamily A, 3	BC115409|PCDHGA3|56112|protocadherin gamma subfamily A, 3	NM_018916|PCDHGA3|56112|protocadherin gamma subfamily A, 3	NM_032011|PCDHGA3|56112|protocadherin gamma subfamily A, 3	BC133708|PCDHGA3|56112|protocadherin gamma subfamily A, 3
hg19_v1_chr1_-_44173010_44173037	0.0907903	SOX2.p2	BC094867|LOC100132774|100132774|uncharacterized LOC100132774
hg19_v1_chr16_+_14294186_14294210	0.0907545	SOX2.p2	BC047761|MKL2|57496|MKL/myocardin-like 2
hg19_v1_chr13_-_76055872_76056805	0.0907332	SOX2.p2	AB449885|TBC1D4|9882|TBC1 domain family, member 4	FM207106|TBC1D4|9882|TBC1 domain family, member 4	FM207107|TBC1D4|9882|TBC1 domain family, member 4	BC151239|TBC1D4|9882|TBC1 domain family, member 4	AB011175|TBC1D4|9882|TBC1 domain family, member 4	NM_014832|TBC1D4|9882|TBC1 domain family, member 4	AK307493|TBC1D4|9882|TBC1 domain family, member 4
hg19_v1_chr1_-_101360337_101360403	0.0905464	SOX2.p2	AK312895|EXTL2|2135|exostoses (multiple)-like 2	AB009284|EXTL2|2135|exostoses (multiple)-like 2	AF000416|EXTL2|2135|exostoses (multiple)-like 2	AK096914|EXTL2|2135|exostoses (multiple)-like 2	BC036015|EXTL2|2135|exostoses (multiple)-like 2	AK298124|EXTL2|2135|exostoses (multiple)-like 2
hg19_v1_chr3_-_52804871_52804995	0.0904601	SOX2.p2	AK294165|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	BC015515|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	L20321|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	AK312420|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	BC063044|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	EF560744|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	NM_001193533|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4	NM_003157|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4
hg19_v1_chr6_+_83073954_83074000	0.0903152	SOX2.p2	AK074790|TPBG|7162|trophoblast glycoprotein	NM_001166392|TPBG|7162|trophoblast glycoprotein
hg19_v1_chr12_-_42877743_42877774	0.0903135	SOX2.p2	AK122881|PRICKLE1|144165|prickle homolog 1 (Drosophila)
hg19_v1_chr18_-_52969714_52969851	0.0901242	SOX2.p2	FR748222|TCF4|6925|transcription factor 4	NM_001243236|TCF4|6925|transcription factor 4
hg19_v1_chr5_-_150521200_150521215	0.090111	SOX2.p2	AK303078|ANXA6|309|annexin A6	NM_001193544|ANXA6|309|annexin A6
hg19_v1_chr5_+_176560056_176560079	0.0901003	SOX2.p2	NM_172349|NSD1|64324|nuclear receptor binding SET domain protein 1
hg19_v1_chr22_+_18632704_18632764	0.090076	SOX2.p2	NM_017414|USP18|11274|ubiquitin specific peptidase 18
hg19_v1_chr5_-_96478502_96478575	0.0900658	SOX2.p2	AK291034|LIX1|167410|Lix1 homolog (chicken)	NM_153234|LIX1|167410|Lix1 homolog (chicken)	AK098400|LIX1|167410|Lix1 homolog (chicken)
hg19_v1_chr4_+_106631966_106631969	0.090003	SOX2.p2	AK292355|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	BC032942|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	NM_001031720|GSTCD|79807|glutathione S-transferase, C-terminal domain containing
hg19_v1_chr13_-_46679143_46679210	0.0899945	SOX2.p2	BT006936|CPB2|1361|carboxypeptidase B2 (plasma)	DQ890567|CPB2|1361|carboxypeptidase B2 (plasma)	EU176478|CPB2|1361|carboxypeptidase B2 (plasma)	AK290829|CPB2|1361|carboxypeptidase B2 (plasma)	AB011969|CPB2|1361|carboxypeptidase B2 (plasma)	M75106|CPB2|1361|carboxypeptidase B2 (plasma)	BC007057|CPB2|1361|carboxypeptidase B2 (plasma)	NM_001872|CPB2|1361|carboxypeptidase B2 (plasma)	NM_016413|CPB2|1361|carboxypeptidase B2 (plasma)
hg19_v1_chr17_+_4046417_4046549	0.0894995	SOX2.p2	NM_144611|CYB5D2|124936|cytochrome b5 domain containing 2	BC051697|CYB5D2|124936|cytochrome b5 domain containing 2
hg19_v1_chrX_+_122318095_122318386	0.0894435	SOX2.p2	NM_000828|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	NM_007325|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	BC032004|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	BC117464|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	U10301|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	U10302|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3	HQ258659|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3
hg19_v1_chr6_+_96025343_96025460	0.0893494	SOX2.p2	NM_024641|MANEA|79694|mannosidase, endo-alpha	BX640869|MANEA|79694|mannosidase, endo-alpha	AY048774|MANEA|79694|mannosidase, endo-alpha	AY048775|MANEA|79694|mannosidase, endo-alpha	BC146671|MANEA|79694|mannosidase, endo-alpha	BC150199|MANEA|79694|mannosidase, endo-alpha	CR936827|MANEA|79694|mannosidase, endo-alpha	AK291940|MANEA|79694|mannosidase, endo-alpha	BX537398|MANEA|79694|mannosidase, endo-alpha
hg19_v1_chr11_-_129817300_129817516	0.0893185	SOX2.p2	AB033057|PRDM10|56980|PR domain containing 10	BC117415|PRDM10|56980|PR domain containing 10	BC143612|PRDM10|56980|PR domain containing 10	BC143613|PRDM10|56980|PR domain containing 10	AF503171|PRDM10|56980|PR domain containing 10	AF275817|PRDM10|56980|PR domain containing 10	NM_199438|PRDM10|56980|PR domain containing 10	NM_199439|PRDM10|56980|PR domain containing 10
hg19_v1_chr14_-_24777160_24777176	0.0893087	SOX2.p2	AF544398|CIDEB|27141|cell death-inducing DFFA-like effector b
hg19_v1_chr2_+_44502596_44502674	0.0892412	SOX2.p2	NM_000341|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	BC022386|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK309145|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK313157|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AB033549|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK091932|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK289636|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	L11696|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	M95548|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK223146|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	BC093624|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	BC093626|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ892031|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ895222|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023513|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023515|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023516|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023517|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1
hg19_v1_chr3_+_38495778_38495809	0.0892397	SOX2.p2	NM_001106|ACVR2B|93|activin A receptor, type IIB	BC096243|ACVR2B|93|activin A receptor, type IIB	BC096244|ACVR2B|93|activin A receptor, type IIB	BC096245|ACVR2B|93|activin A receptor, type IIB	BC099642|ACVR2B|93|activin A receptor, type IIB	X77533|ACVR2B|93|activin A receptor, type IIB
hg19_v1_chr8_+_85095501_85095585	0.0891513	SOX2.p2	AK095560|RALYL|138046|RALY RNA binding protein-like	AK094543|RALYL|138046|RALY RNA binding protein-like	AF495529|RALYL|138046|RALY RNA binding protein-like	AF495530|RALYL|138046|RALY RNA binding protein-like	NM_173848|RALYL|138046|RALY RNA binding protein-like
hg19_v1_chr7_-_20826503_20826565	0.0891375	SOX2.p2	AK056857|SP8|221833|Sp8 transcription factor	AK307969|SP8|221833|Sp8 transcription factor	AY167047|SP8|221833|Sp8 transcription factor	BC038669|SP8|221833|Sp8 transcription factor	AK290465|SP8|221833|Sp8 transcription factor	NM_182700|SP8|221833|Sp8 transcription factor	NM_198956|SP8|221833|Sp8 transcription factor
hg19_v1_chr6_-_30028755_30028971	0.0890478	SOX2.p2	AF032109|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	AK126001|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	BX648746|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	BC067890|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	AF032110|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)
hg19_v1_chr15_+_22892699_22892708	0.0890039	SOX2.p2	AK291604|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg19_v1_chr17_-_3571905_3571972	0.0888818	SOX2.p2	AF028823|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	NM_001204698|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	NM_014604|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3
hg19_v1_chr14_-_38064440_38064488	0.0888624	SOX2.p2	NM_004496|FOXA1|3169|forkhead box A1
hg19_v1_chr2_+_61293362_61293362	0.0888222	SOX2.p2	BC070104|KIAA1841|84542|KIAA1841	NM_032506|KIAA1841|84542|KIAA1841
hg19_v1_chr14_-_21994342_21994483	0.0888048	SOX2.p2	AK294051|SALL2|6297|sal-like 2 (Drosophila)	BC024245|SALL2|6297|sal-like 2 (Drosophila)	AK296414|SALL2|6297|sal-like 2 (Drosophila)	BC090958|SALL2|6297|sal-like 2 (Drosophila)	AK289358|SALL2|6297|sal-like 2 (Drosophila)
hg19_v1_chr6_-_105307782_105307795	0.0888036	SOX2.p2	AK131207|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	NM_020771|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1
hg19_v1_chr1_+_43148187_43148234	0.0884503	SOX2.p2	DQ891609|YBX1|4904|Y box binding protein 1	DQ894802|YBX1|4904|Y box binding protein 1
hg19_v1_chrX_-_15872905_15872913	0.0884263	SOX2.p2	
hg19_v1_chr14_-_20774129_20774154	0.0880609	SOX2.p2	AK074553|TTC5|91875|tetratricopeptide repeat domain 5	NM_138376|TTC5|91875|tetratricopeptide repeat domain 5
hg19_v1_chr5_-_49737216_49737271	0.0879874	SOX2.p2	NM_198449|EMB|133418|embigin
hg19_v1_chr4_+_83351725_83351764	0.087959	SOX2.p2	NM_021204|ENOPH1|58478|enolase-phosphatase 1	AF087881|ENOPH1|58478|enolase-phosphatase 1	AF113125|ENOPH1|58478|enolase-phosphatase 1
hg19_v1_chr11_-_61734896_61735059	0.0877453	SOX2.p2	DQ891113|FTH1|2495|ferritin, heavy polypeptide 1	DQ894293|FTH1|2495|ferritin, heavy polypeptide 1	AF088851|FTH1|2495|ferritin, heavy polypeptide 1	M12937|FTH1|2495|ferritin, heavy polypeptide 1	BC015156|FTH1|2495|ferritin, heavy polypeptide 1	M11146|FTH1|2495|ferritin, heavy polypeptide 1	X00318|FTH1|2495|ferritin, heavy polypeptide 1	M97164|FTH1|2495|ferritin, heavy polypeptide 1	BC016857|FTH1|2495|ferritin, heavy polypeptide 1	BC001399|FTH1|2495|ferritin, heavy polypeptide 1
hg19_v1_chrX_-_13835187_13835203	0.0876832	SOX2.p2	AK299675|GPM6B|2824|glycoprotein M6B	BC047295|GPM6B|2824|glycoprotein M6B
hg19_v1_chr7_-_143599163_143599367	0.0874688	SOX2.p2	AB018281|FAM115A|9747|family with sequence similarity 115, member A	NM_014719|FAM115A|9747|family with sequence similarity 115, member A	BC000609|FAM115A|9747|family with sequence similarity 115, member A	AK291605|FAM115A|9747|family with sequence similarity 115, member A	AK001640|FAM115A|9747|family with sequence similarity 115, member A	NM_001206938|FAM115A|9747|family with sequence similarity 115, member A
hg19_v1_chr6_-_90062450_90062581	0.0873884	SOX2.p2	AK290574|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U	BC013973|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U
hg19_v1_chr4_-_24586178_24586200	0.0870492	SOX2.p2	NM_001358|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg19_v1_chr4_+_154074269_154074269	0.0869088	SOX2.p2	BC011052|TRIM2|23321|tripartite motif containing 2	NM_001130067|TRIM2|23321|tripartite motif containing 2
hg19_v1_chr1_-_57431620_57431812	0.086772	SOX2.p2	HQ258464|C8B|732|complement component 8, beta polypeptide	BC130575|C8B|732|complement component 8, beta polypeptide	M16973|C8B|732|complement component 8, beta polypeptide	AK292740|C8B|732|complement component 8, beta polypeptide	AK313382|C8B|732|complement component 8, beta polypeptide	BC020701|C8B|732|complement component 8, beta polypeptide	NM_000066|C8B|732|complement component 8, beta polypeptide	AK298425|C8B|732|complement component 8, beta polypeptide	AK316209|C8B|732|complement component 8, beta polypeptide	AK298444|C8B|732|complement component 8, beta polypeptide
hg19_v1_chr6_-_52926588_52926683	0.0867577	SOX2.p2	NM_014920|ICK|22858|intestinal cell (MAK-like) kinase	NM_016513|ICK|22858|intestinal cell (MAK-like) kinase
hg19_v1_chr9_+_116263706_116263856	0.086639	SOX2.p2	AF463495|RGS3|5998|regulator of G-protein signaling 3	NM_130795|RGS3|5998|regulator of G-protein signaling 3	AK096840|RGS3|5998|regulator of G-protein signaling 3	BC042555|RGS3|5998|regulator of G-protein signaling 3	AF490840|RGS3|5998|regulator of G-protein signaling 3
hg19_v1_chr1_+_11072678_11072743	0.0865087	SOX2.p2	NM_007375|TARDBP|23435|TAR DNA binding protein	AK299454|TARDBP|23435|TAR DNA binding protein	AK312416|TARDBP|23435|TAR DNA binding protein	BC001487|TARDBP|23435|TAR DNA binding protein	BC095435|TARDBP|23435|TAR DNA binding protein	BC071657|TARDBP|23435|TAR DNA binding protein	AL050265|TARDBP|23435|TAR DNA binding protein	AK222754|TARDBP|23435|TAR DNA binding protein	AK295920|TARDBP|23435|TAR DNA binding protein
hg19_v1_chr18_+_28956739_28956874	0.0864965	SOX2.p2	AY177664|DSG4|147409|desmoglein 4	NM_001134453|DSG4|147409|desmoglein 4	NM_177986|DSG4|147409|desmoglein 4	AY168788|DSG4|147409|desmoglein 4	AY228236|DSG4|147409|desmoglein 4	BC132907|DSG4|147409|desmoglein 4	BC132909|DSG4|147409|desmoglein 4	AY227350|DSG4|147409|desmoglein 4
hg19_v1_chr13_-_48987652_48987652	0.0863605	SOX2.p2	NM_001162498|LPAR6|10161|lysophosphatidic acid receptor 6
hg19_v1_chr10_-_33623978_33624019	0.0863514	SOX2.p2	BX648025|NRP1|8829|neuropilin 1
hg19_v1_chr1_-_168105620_168105623	0.0863038	SOX2.p2	AK056040|GPR161|23432|G protein-coupled receptor 161	BC028163|GPR161|23432|G protein-coupled receptor 161	NM_153832|GPR161|23432|G protein-coupled receptor 161
hg19_v1_chr12_+_68042493_68042753	0.0861847	SOX2.p2	AK313937|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2	NM_003583|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2	NM_006482|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2	BC005809|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2	BC006375|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2	Y13493|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
hg19_v1_chr7_+_114055171_114055213	0.0861547	SOX2.p2	AK296957|FOXP2|93986|forkhead box P2
hg19_v1_chr1_-_173638970_173639002	0.0861509	SOX2.p2	AK127170|ANKRD45|339416|ankyrin repeat domain 45	BC126353|ANKRD45|339416|ankyrin repeat domain 45	BC126355|ANKRD45|339416|ankyrin repeat domain 45	NM_198493|ANKRD45|339416|ankyrin repeat domain 45
hg19_v1_chr1_+_236558715_236558929	0.0861179	SOX2.p2	AK096339|EDARADD|128178|EDAR-associated death domain	NM_080738|EDARADD|128178|EDAR-associated death domain	AY028914|EDARADD|128178|EDAR-associated death domain	AK291930|EDARADD|128178|EDAR-associated death domain	BC006533|EDARADD|128178|EDAR-associated death domain	AY071862|EDARADD|128178|EDAR-associated death domain
hg19_v1_chr16_+_67876221_67876300	0.0860451	SOX2.p2	AK289367|THAP11|57215|THAP domain containing 11	BC012182|THAP11|57215|THAP domain containing 11
hg19_v1_chr2_+_231921562_231921592	0.0860342	SOX2.p2	NM_001191037|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	NM_002807|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	AK307415|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC094720|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
hg19_v1_chr5_+_150400132_150400214	0.0860092	SOX2.p2	AK310242|GPX3|2878|glutathione peroxidase 3 (plasma)	BC066949|GPX3|2878|glutathione peroxidase 3 (plasma)	D00632|GPX3|2878|glutathione peroxidase 3 (plasma)	BC025956|GPX3|2878|glutathione peroxidase 3 (plasma)	BC035841|GPX3|2878|glutathione peroxidase 3 (plasma)	BC050378|GPX3|2878|glutathione peroxidase 3 (plasma)	BC013218|GPX3|2878|glutathione peroxidase 3 (plasma)	BC013601|GPX3|2878|glutathione peroxidase 3 (plasma)	AF217787|GPX3|2878|glutathione peroxidase 3 (plasma)
hg19_v1_chr15_-_41694619_41694705	0.0860089	SOX2.p2	AF151823|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1	BC000780|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1	NM_016013|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1	AK310033|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1	AK310983|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1	AK309889|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1
hg19_v1_chr12_-_6716550_6716563	0.0858941	SOX2.p2	AK128741|CHD4|1108|chromodomain helicase DNA binding protein 4	NM_001273|CHD4|1108|chromodomain helicase DNA binding protein 4
hg19_v1_chr7_+_74072055_74072190	0.0858587	SOX2.p2	BC099907|GTF2I|2969|general transcription factor IIi	AK294935|GTF2I|2969|general transcription factor IIi	AF035737|GTF2I|2969|general transcription factor IIi	AF038967|GTF2I|2969|general transcription factor IIi	AF038968|GTF2I|2969|general transcription factor IIi	AF038969|GTF2I|2969|general transcription factor IIi
hg19_v1_chr5_+_140797243_140797259	0.0857134	SOX2.p2	NM_018927|PCDHGB7|56099|protocadherin gamma subfamily B, 7
hg19_v1_chr8_+_146024234_146024411	0.0857028	SOX2.p2	AK131440|ZNF517|340385|zinc finger protein 517	NM_213605|ZNF517|340385|zinc finger protein 517	AK096527|ZNF517|340385|zinc finger protein 517	AK097278|ZNF517|340385|zinc finger protein 517
hg19_v1_chr2_+_231921608_231921624	0.085613	SOX2.p2	BC014013|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC032445|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC112344|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC114434|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	AK312528|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC001053|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	AK307513|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
hg19_v1_chr7_-_6388408_6388613	0.0855015	SOX2.p2	AK311878|C7orf70|84792|chromosome 7 open reading frame 70	AF533707|C7orf70|84792|chromosome 7 open reading frame 70	BC006110|C7orf70|84792|chromosome 7 open reading frame 70	NM_001037163|C7orf70|84792|chromosome 7 open reading frame 70	BC142977|C7orf70|84792|chromosome 7 open reading frame 70
hg19_v1_chr17_+_76210329_76210465	0.0853599	SOX2.p2	AK223428|BIRC5|332|baculoviral IAP repeat containing 5	BC000784|BIRC5|332|baculoviral IAP repeat containing 5	BC034148|BIRC5|332|baculoviral IAP repeat containing 5	AY927772|BIRC5|332|baculoviral IAP repeat containing 5	BC008718|BIRC5|332|baculoviral IAP repeat containing 5	HM625836|BIRC5|332|baculoviral IAP repeat containing 5	AB028869|BIRC5|332|baculoviral IAP repeat containing 5	AF077350|BIRC5|332|baculoviral IAP repeat containing 5	AK311917|BIRC5|332|baculoviral IAP repeat containing 5	BC065497|BIRC5|332|baculoviral IAP repeat containing 5	AM393128|BIRC5|332|baculoviral IAP repeat containing 5	AB154416|BIRC5|332|baculoviral IAP repeat containing 5	AY830084|BIRC5|332|baculoviral IAP repeat containing 5	CR541740|BIRC5|332|baculoviral IAP repeat containing 5	DQ227257|BIRC5|332|baculoviral IAP repeat containing 5	DQ310375|BIRC5|332|baculoviral IAP repeat containing 5	DQ310376|BIRC5|332|baculoviral IAP repeat containing 5	DQ310377|BIRC5|332|baculoviral IAP repeat containing 5	DQ310378|BIRC5|332|baculoviral IAP repeat containing 5	DQ310379|BIRC5|332|baculoviral IAP repeat containing 5	DQ508249|BIRC5|332|baculoviral IAP repeat containing 5	DQ508245|BIRC5|332|baculoviral IAP repeat containing 5	DQ508246|BIRC5|332|baculoviral IAP repeat containing 5	DQ508247|BIRC5|332|baculoviral IAP repeat containing 5	DQ508248|BIRC5|332|baculoviral IAP repeat containing 5
hg19_v1_chr5_-_43313492_43313571	0.0852908	SOX2.p2	BC000297|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	BC082234|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	M15802|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	X66435|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	AK095492|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	AK315593|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
hg19_v1_chr9_+_102677457_102677463	0.0851615	SOX2.p2	BC101564|STX17|55014|syntaxin 17	BC101566|STX17|55014|syntaxin 17	BC143430|STX17|55014|syntaxin 17
hg19_v1_chr14_+_58894395_58894447	0.0850494	SOX2.p2	
hg19_v1_chr11_+_33279167_33279404	0.0849243	SOX2.p2	NM_001048200|HIPK3|10114|homeodomain interacting protein kinase 3	NM_005734|HIPK3|10114|homeodomain interacting protein kinase 3	Y09306|HIPK3|10114|homeodomain interacting protein kinase 3	AF305239|HIPK3|10114|homeodomain interacting protein kinase 3
hg19_v1_chr7_+_96635289_96635289	0.0847732	SOX2.p2	NM_005222|DLX6|1750|distal-less homeobox 6
hg19_v1_chr2_+_189839078_189839111	0.0846467	SOX2.p2	AK308010|COL3A1|1281|collagen, type III, alpha 1	NM_000090|COL3A1|1281|collagen, type III, alpha 1	BC028178|COL3A1|1281|collagen, type III, alpha 1
hg19_v1_chr14_-_104028972_104029150	0.0845328	SOX2.p2	AB020680|BAG5|9529|BCL2-associated athanogene 5	NM_001015048|BAG5|9529|BCL2-associated athanogene 5
hg19_v1_chr15_+_77287688_77287725	0.0844309	SOX2.p2	AK304052|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	U94778|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	AK316220|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	AK298733|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1
hg19_v1_chr5_+_134209909_134210195	0.0841552	SOX2.p2	BC001615|TXNDC15|79770|thioredoxin domain containing 15	AK026278|TXNDC15|79770|thioredoxin domain containing 15	AK225454|TXNDC15|79770|thioredoxin domain containing 15	AK225462|TXNDC15|79770|thioredoxin domain containing 15	BC032568|TXNDC15|79770|thioredoxin domain containing 15	AK307529|TXNDC15|79770|thioredoxin domain containing 15	BX538131|TXNDC15|79770|thioredoxin domain containing 15	EU832512|TXNDC15|79770|thioredoxin domain containing 15	EU832593|TXNDC15|79770|thioredoxin domain containing 15
hg19_v1_chr1_+_100818052_100818155	0.0840945	SOX2.p2	BC071578|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	AF064103|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	AK310657|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	AF000367|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)
hg19_v1_chr12_+_124457568_124457891	0.0840299	SOX2.p2	AL834266|ZNF664|144348|zinc finger protein 664	NM_001204298|ZNF664|144348|zinc finger protein 664	NM_001204299|ZNF664-FAM101A|100533183|protein FAM101A	NM_152437|ZNF664|144348|zinc finger protein 664	BC051696|ZNF664|144348|zinc finger protein 664	BC037793|ZNF664|144348|zinc finger protein 664	BX647762|ZNF664|144348|zinc finger protein 664	AK056034|ZNF664|144348|zinc finger protein 664
hg19_v1_chr19_+_3572958_3572999	0.0839948	SOX2.p2	AK314201|HMG20B|10362|high mobility group 20B	AK090733|HMG20B|10362|high mobility group 20B	AK310601|HMG20B|10362|high mobility group 20B	AF318366|HMG20B|10362|high mobility group 20B
hg19_v1_chr18_-_53257033_53257044	0.0838062	SOX2.p2	AK315074|TCF4|6925|transcription factor 4	AK299169|TCF4|6925|transcription factor 4	NM_001243227|TCF4|6925|transcription factor 4	NM_001243228|TCF4|6925|transcription factor 4
hg19_v1_chr5_-_58571916_58571944	0.083619	SOX2.p2	AY245867|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	NM_001197220|PDE4D|5144|phosphodiesterase 4D, cAMP-specific
hg19_v1_chr1_+_215178884_215178884	0.0835995	SOX2.p2	NM_001017424|KCNK2|3776|potassium channel, subfamily K, member 2
hg19_v1_chr5_+_140810181_140810205	0.0835352	SOX2.p2	AB011160|PCDHGA12|26025|protocadherin gamma subfamily A, 12
hg19_v1_chr7_+_2671582_2671624	0.0835201	SOX2.p2	NM_025250|TTYH3|80727|tweety homolog 3 (Drosophila)	AB051478|TTYH3|80727|tweety homolog 3 (Drosophila)	BC152447|TTYH3|80727|tweety homolog 3 (Drosophila)
hg19_v1_chr17_+_64960754_64961025	0.0833872	SOX2.p2	NM_014405|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4	AF162692|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4	AK315149|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4	DQ891815|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4	DQ895000|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4	BC034532|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4
hg19_v1_chr1_-_21503352_21503388	0.0833842	SOX2.p2	NM_001198801|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3	NM_001198802|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg19_v1_chr3_-_11623829_11623837	0.0832634	SOX2.p2	AK307708|VGLL4|9686|vestigial like 4 (Drosophila)	NM_001128220|VGLL4|9686|vestigial like 4 (Drosophila)
hg19_v1_chr2_-_200325200_200325283	0.0831554	SOX2.p2	AB028957|SATB2|23314|SATB homeobox 2
hg19_v1_chr6_-_83903632_83903693	0.0830523	SOX2.p2	AK301867|PGM3|5238|phosphoglucomutase 3	NM_001199917|PGM3|5238|phosphoglucomutase 3
hg19_v1_chr18_-_32924417_32924425	0.0829868	SOX2.p2	AK291246|ZNF24|7572|zinc finger protein 24	NM_006965|ZNF24|7572|zinc finger protein 24
hg19_v1_chr5_-_137090049_137090095	0.0828223	SOX2.p2	
hg19_v1_chr5_-_147162264_147162347	0.0826945	SOX2.p2	AK299724|JAKMIP2|9832|janus kinase and microtubule interacting protein 2
hg19_v1_chr1_+_47799488_47799617	0.0826515	SOX2.p2	BC017806|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AF087865|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AF112216|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AF110643|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AK223014|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AK294294|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AK298502|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AF070416|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AK025258|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AK293238|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	AK312693|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	BC014961|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	DQ892213|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	DQ895408|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	DQ895409|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic
hg19_v1_chr2_+_61389628_61389628	0.0826338	SOX2.p2	NM_001143959|C2orf74|339804|chromosome 2 open reading frame 74
hg19_v1_chr8_+_67039130_67039551	0.0825709	SOX2.p2	AK091310|TRIM55|84675|tripartite motif containing 55	AJ243488|TRIM55|84675|tripartite motif containing 55	AJ243489|TRIM55|84675|tripartite motif containing 55	AJ277493|TRIM55|84675|tripartite motif containing 55	AJ431704|TRIM55|84675|tripartite motif containing 55	NM_033058|TRIM55|84675|tripartite motif containing 55	NM_184085|TRIM55|84675|tripartite motif containing 55	NM_184086|TRIM55|84675|tripartite motif containing 55	NM_184087|TRIM55|84675|tripartite motif containing 55	AJ291712|TRIM55|84675|tripartite motif containing 55	BC007750|TRIM55|84675|tripartite motif containing 55	AK091728|TRIM55|84675|tripartite motif containing 55	BT007212|TRIM55|84675|tripartite motif containing 55
hg19_v1_chr4_+_106629905_106630041	0.0824587	SOX2.p2	AK303547|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	BX648355|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	NM_024751|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	AK023335|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	AK225563|GSTCD|79807|glutathione S-transferase, C-terminal domain containing
hg19_v1_chr3_+_174577069_174577111	0.0823242	SOX2.p2	AJ607396|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	AK308416|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	AL832144|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	NM_207015|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	BC057243|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2
hg19_v1_chr16_-_75529289_75529306	0.0821781	SOX2.p2	
hg19_v1_chr3_-_57582866_57583075	0.0819396	SOX2.p2	AF493883|ARF4|378|ADP-ribosylation factor 4	DQ894082|ARF4|378|ADP-ribosylation factor 4	EU176202|ARF4|378|ADP-ribosylation factor 4	M36341|ARF4|378|ADP-ribosylation factor 4	U91920|ARF4|378|ADP-ribosylation factor 4	BC003364|ARF4|378|ADP-ribosylation factor 4	AK313008|ARF4|378|ADP-ribosylation factor 4
hg19_v1_chr19_-_12992249_12992334	0.0819391	SOX2.p2	AK075449|DNASE2|1777|deoxyribonuclease II, lysosomal	AF047016|DNASE2|1777|deoxyribonuclease II, lysosomal	AB004574|DNASE2|1777|deoxyribonuclease II, lysosomal	AK297493|DNASE2|1777|deoxyribonuclease II, lysosomal	AF045937|DNASE2|1777|deoxyribonuclease II, lysosomal	AK315358|DNASE2|1777|deoxyribonuclease II, lysosomal	BC065209|DNASE2|1777|deoxyribonuclease II, lysosomal	AF060222|DNASE2|1777|deoxyribonuclease II, lysosomal	AK311145|DNASE2|1777|deoxyribonuclease II, lysosomal	NM_001375|DNASE2|1777|deoxyribonuclease II, lysosomal
hg19_v1_chr12_-_56615484_56615661	0.08192	SOX2.p2	NM_001242826|RNF41|10193|ring finger protein 41	BC011626|RNF41|10193|ring finger protein 41	BC095418|RNF41|10193|ring finger protein 41	BC036267|RNF41|10193|ring finger protein 41
hg19_v1_chr1_-_155214315_155214652	0.081916	SOX2.p2	BC062626|GBAP1|2630|glucosidase, beta, acid pseudogene 1	AK311242|GBA|2629|glucosidase, beta, acid	AK312502|GBA|2629|glucosidase, beta, acid	BX648487|GBA|2629|glucosidase, beta, acid	AK300829|GBA|2629|glucosidase, beta, acid	AK291911|GBA|2629|glucosidase, beta, acid	AK300876|GBA|2629|glucosidase, beta, acid	NM_001005741|GBA|2629|glucosidase, beta, acid	NM_001005742|GBA|2629|glucosidase, beta, acid	NM_001171811|GBA|2629|glucosidase, beta, acid
hg19_v1_chr15_-_64995388_64995416	0.0818596	SOX2.p2	AF057297|OAZ2|4947|ornithine decarboxylase antizyme 2	BC063577|OAZ2|4947|ornithine decarboxylase antizyme 2	BC073877|OAZ2|4947|ornithine decarboxylase antizyme 2	BC035493|OAZ2|4947|ornithine decarboxylase antizyme 2	BC092483|OAZ2|4947|ornithine decarboxylase antizyme 2
hg19_v1_chr11_+_118889140_118889240	0.0818484	SOX2.p2	AF078862|TRAPPC4|51399|trafficking protein particle complex 4	AF105025|TRAPPC4|51399|trafficking protein particle complex 4	AF151862|TRAPPC4|51399|trafficking protein particle complex 4	NM_016146|TRAPPC4|51399|trafficking protein particle complex 4
hg19_v1_chr19_+_58790306_58790446	0.0817021	SOX2.p2	AK093110|ZNF8|7554|zinc finger protein 8	NM_021089|ZNF8|7554|zinc finger protein 8	AK225825|ZNF8|7554|zinc finger protein 8	AK299716|ZNF8|7554|zinc finger protein 8	BC039323|ZNF8|7554|zinc finger protein 8	EU446717|ZNF8|7554|zinc finger protein 8
hg19_v1_chr11_+_69455837_69455875	0.0814643	SOX2.p2	NM_053056|CCND1|595|cyclin D1
hg19_v1_chr4_+_26322627_26322646	0.0814615	SOX2.p2	AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region
hg19_v1_chr5_+_138211084_138211099	0.0810699	SOX2.p2	HQ589335|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg19_v1_chr11_+_125496123_125496336	0.081059	SOX2.p2	AK292549|CHEK1|1111|checkpoint kinase 1	NM_001274|CHEK1|1111|checkpoint kinase 1	BC017575|CHEK1|1111|checkpoint kinase 1
hg19_v1_chr1_+_117602944_117602964	0.0808653	SOX2.p2	AF073771|TTF2|8458|transcription termination factor, RNA polymerase II	NM_003594|TTF2|8458|transcription termination factor, RNA polymerase II	AF080255|TTF2|8458|transcription termination factor, RNA polymerase II	BC015341|TTF2|8458|transcription termination factor, RNA polymerase II	BC030058|TTF2|8458|transcription termination factor, RNA polymerase II
hg19_v1_chr7_+_55980330_55980367	0.0808448	SOX2.p2	AK097282|ZNF713|349075|zinc finger protein 713	NM_182633|ZNF713|349075|zinc finger protein 713
hg19_v1_chr15_+_96875793_96875793	0.0808082	SOX2.p2	AK316086|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	NM_001145156|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2
hg19_v1_chr6_-_52926486_52926579	0.0804945	SOX2.p2	AB023153|ICK|22858|intestinal cell (MAK-like) kinase	BC152464|ICK|22858|intestinal cell (MAK-like) kinase	AF152469|ICK|22858|intestinal cell (MAK-like) kinase	AK074892|ICK|22858|intestinal cell (MAK-like) kinase
hg19_v1_chr19_+_19976625_19976743	0.0802636	SOX2.p2	BC053607|ZNF253|56242|zinc finger protein 253	BC014148|ZNF253|56242|zinc finger protein 253	NM_021047|ZNF253|56242|zinc finger protein 253	BC065572|ZNF253|56242|zinc finger protein 253	AK074757|ZNF253|56242|zinc finger protein 253	BC125063|ZNF253|56242|zinc finger protein 253	BC125064|ZNF253|56242|zinc finger protein 253
hg19_v1_chr3_-_165555167_165555220	0.0802217	SOX2.p2	M16474|BCHE|590|butyrylcholinesterase	BC018141|BCHE|590|butyrylcholinesterase	BC008396|BCHE|590|butyrylcholinesterase	AK292063|BCHE|590|butyrylcholinesterase	M16541|BCHE|590|butyrylcholinesterase
hg19_v1_chr2_-_204399906_204400387	0.0800975	SOX2.p2	AK096270|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	AB053311|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	AJ584699|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	AY494951|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	AY523977|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	AY523978|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	NM_203365|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	NM_213589|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
hg19_v1_chr19_-_44439410_44439459	0.0800199	SOX2.p2	AK127739|ZNF45|7596|zinc finger protein 45	NM_003425|ZNF45|7596|zinc finger protein 45
hg19_v1_chr14_-_35182944_35183033	0.0798078	SOX2.p2	BC011444|CFL2|1073|cofilin 2 (muscle)	AK314157|CFL2|1073|cofilin 2 (muscle)	NM_021914|CFL2|1073|cofilin 2 (muscle)	AF134802|CFL2|1073|cofilin 2 (muscle)
hg19_v1_chr16_+_31724530_31724563	0.0796541	SOX2.p2	NM_001130913|ZNF720|124411|zinc finger protein 720	BC055408|ZNF720|124411|zinc finger protein 720
hg19_v1_chrX_-_154299253_154299642	0.0796424	SOX2.p2	BC002600|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor	X64644|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor	NM_001018024|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor	NM_001018025|MTCP1|4515|mature T-cell proliferation 1
hg19_v1_chr22_+_39052628_39052669	0.0796049	SOX2.p2	AK307265|CBY1|25776|chibby homolog 1 (Drosophila)	AK311928|CBY1|25776|chibby homolog 1 (Drosophila)	NM_001002880|CBY1|25776|chibby homolog 1 (Drosophila)	NM_015373|CBY1|25776|chibby homolog 1 (Drosophila)
hg19_v1_chr1_+_161068150_161068191	0.0795002	SOX2.p2	BC032482|KLHDC9|126823|kelch domain containing 9	NM_001007255|KLHDC9|126823|kelch domain containing 9	NM_152366|KLHDC9|126823|kelch domain containing 9	AY601914|KLHDC9|126823|kelch domain containing 9	BC022077|KLHDC9|126823|kelch domain containing 9	BC066896|KLHDC9|126823|kelch domain containing 9	AK093268|KLHDC9|126823|kelch domain containing 9
hg19_v1_chr11_+_5710926_5711111	0.0793869	SOX2.p2	AK308221|TRIM22|10346|tripartite motif containing 22	AK310098|TRIM22|10346|tripartite motif containing 22	BC022281|TRIM22|10346|tripartite motif containing 22	AK298715|TRIM22|10346|tripartite motif containing 22	BC035582|TRIM22|10346|tripartite motif containing 22	AK290434|TRIM22|10346|tripartite motif containing 22	X82200|TRIM22|10346|tripartite motif containing 22	AK308796|TRIM22|10346|tripartite motif containing 22	AK301192|TRIM22|10346|tripartite motif containing 22
hg19_v1_chr12_-_72057676_72057748	0.0793407	SOX2.p2	NM_144982|ZFC3H1|196441|zinc finger, C3H1-type containing
hg19_v1_chr2_-_232326394_232326465	0.0793344	SOX2.p2	AK001314|NCL|4691|nucleolin
hg19_v1_chr8_-_38205652_38205732	0.079271	SOX2.p2	BC073858|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1
hg19_v1_chr5_+_42548314_42548314	0.0792381	SOX2.p2	NM_001242403|GHR|2690|growth hormone receptor	Z11802|GHR|2690|growth hormone receptor
hg19_v1_chr12_+_65218351_65218416	0.0791862	SOX2.p2	NM_015279|TBC1D30|23329|TBC1 domain family, member 30	AK055404|TBC1D30|23329|TBC1 domain family, member 30
hg19_v1_chr1_+_145507556_145507666	0.0791683	SOX2.p2	NM_005105|RBM8A|9939|RNA binding motif protein 8A	BC071577|RBM8A|9939|RNA binding motif protein 8A	BC017088|RBM8A|9939|RNA binding motif protein 8A	AF198620|RBM8A|9939|RNA binding motif protein 8A	AF182415|RBM8A|9939|RNA binding motif protein 8A	BC017770|RBM8A|9939|RNA binding motif protein 8A	AK075009|RBM8A|9939|RNA binding motif protein 8A	AF161463|RBM8A|9939|RNA binding motif protein 8A	AF231511|RBM8A|9939|RNA binding motif protein 8A	AF127761|RBM8A|9939|RNA binding motif protein 8A	AF299118|RBM8A|9939|RNA binding motif protein 8A	CR541805|RBM8A|9939|RNA binding motif protein 8A	CR541823|RBM8A|9939|RNA binding motif protein 8A	GQ129283|RBM8A|9939|RNA binding motif protein 8A	GQ129284|RBM8A|9939|RNA binding motif protein 8A
hg19_v1_chr1_+_244998592_244998826	0.0791635	SOX2.p2	AK125259|FAM36A|116228|family with sequence similarity 36, member A	NM_198076|FAM36A|116228|family with sequence similarity 36, member A
hg19_v1_chr20_+_61448391_61448416	0.079063	SOX2.p2	BC011705|COL9A3|1299|collagen, type IX, alpha 3	NM_001853|COL9A3|1299|collagen, type IX, alpha 3	DQ892946|COL9A3|1299|collagen, type IX, alpha 3	DQ896194|COL9A3|1299|collagen, type IX, alpha 3	L41162|COL9A3|1299|collagen, type IX, alpha 3
hg19_v1_chr17_+_56406294_56406375	0.0789176	SOX2.p2	AK311311|LOC100506779|100506779|uncharacterized LOC100506779	AK311208|LOC100506779|100506779|uncharacterized LOC100506779
hg19_v1_chr2_+_196521470_196521681	0.0788202	SOX2.p2	BC029413|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	NM_001127257|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	CR749813|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10
hg19_v1_chr15_+_69606741_69606741	0.078676	SOX2.p2	AK000197|PAQR5|54852|progestin and adipoQ receptor family member V	AY424283|PAQR5|54852|progestin and adipoQ receptor family member V	NM_001104554|PAQR5|54852|progestin and adipoQ receptor family member V
hg19_v1_chr4_-_24586015_24586137	0.0786145	SOX2.p2	AF279891|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg19_v1_chr2_+_219082119_219082193	0.0786068	SOX2.p2	AF006085|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa	NM_005731|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa	BT006898|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa
hg19_v1_chr5_-_134734915_134734927	0.0785271	SOX2.p2	AK023409|H2AFY|9555|H2A histone family, member Y	AK296014|H2AFY|9555|H2A histone family, member Y	NM_001040158|H2AFY|9555|H2A histone family, member Y	NM_138609|H2AFY|9555|H2A histone family, member Y	NM_138610|H2AFY|9555|H2A histone family, member Y
hg19_v1_chr12_+_53845887_53845902	0.0784783	SOX2.p2	BC071942|PCBP2|5094|poly(rC) binding protein 2
hg19_v1_chr22_+_50312333_50312417	0.0784734	SOX2.p2	BC050675|CRELD2|79174|cysteine-rich with EGF-like domains 2	DQ470678|CRELD2|79174|cysteine-rich with EGF-like domains 2	AK225930|CRELD2|79174|cysteine-rich with EGF-like domains 2	AY358355|CRELD2|79174|cysteine-rich with EGF-like domains 2	BC002894|CRELD2|79174|cysteine-rich with EGF-like domains 2	DQ470676|CRELD2|79174|cysteine-rich with EGF-like domains 2	DQ470677|CRELD2|79174|cysteine-rich with EGF-like domains 2	DQ470680|CRELD2|79174|cysteine-rich with EGF-like domains 2	AJ968414|CRELD2|79174|cysteine-rich with EGF-like domains 2
hg19_v1_chr10_+_70980058_70980104	0.0782861	SOX2.p2	AK095086|HKDC1|80201|hexokinase domain containing 1	NM_025130|HKDC1|80201|hexokinase domain containing 1	BC110505|HKDC1|80201|hexokinase domain containing 1	BC110504|HKDC1|80201|hexokinase domain containing 1	AK291024|HKDC1|80201|hexokinase domain containing 1	BC069201|HKDC1|80201|hexokinase domain containing 1
hg19_v1_chr1_-_101360405_101360417	0.0781918	SOX2.p2	NM_001033025|EXTL2|2135|exostoses (multiple)-like 2	NM_001439|EXTL2|2135|exostoses (multiple)-like 2
hg19_v1_chr1_+_154193294_154193454	0.078087	SOX2.p2	NM_014847|UBAP2L|9898|ubiquitin associated protein 2-like	AK302662|UBAP2L|9898|ubiquitin associated protein 2-like	AK303533|UBAP2L|9898|ubiquitin associated protein 2-like	AJ243668|UBAP2L|9898|ubiquitin associated protein 2-like
hg19_v1_chrX_-_49121171_49121287	0.077822	SOX2.p2	AK292052|FOXP3|50943|forkhead box P3	AK299988|FOXP3|50943|forkhead box P3	AF277993|FOXP3|50943|forkhead box P3	NM_001114377|FOXP3|50943|forkhead box P3	NM_014009|FOXP3|50943|forkhead box P3
hg19_v1_chr15_-_89089792_89089911	0.0777827	SOX2.p2	BC109060|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	BC109061|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	BC073867|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	AK054603|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	BC064591|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	AB073887|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	NM_001144074|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	NM_017996|DET1|55070|de-etiolated homolog 1 (Arabidopsis)
hg19_v1_chr2_-_180427314_180427314	0.0777171	SOX2.p2	AK057999|ZNF385B|151126|zinc finger protein 385B	NM_001113398|ZNF385B|151126|zinc finger protein 385B
hg19_v1_chr1_-_150978879_150979384	0.0777046	SOX2.p2	BC032321|FAM63A|55793|family with sequence similarity 63, member A	AK303962|FAM63A|55793|family with sequence similarity 63, member A	AK125493|FAM63A|55793|family with sequence similarity 63, member A	AK002142|FAM63A|55793|family with sequence similarity 63, member A	NM_001163259|FAM63A|55793|family with sequence similarity 63, member A	NM_001163260|FAM63A|55793|family with sequence similarity 63, member A	BC014447|FAM63A|55793|family with sequence similarity 63, member A	NM_001040217|FAM63A|55793|family with sequence similarity 63, member A
hg19_v1_chr1_+_242012032_242012139	0.0776366	SOX2.p2	NM_003686|EXO1|9156|exonuclease 1	NM_006027|EXO1|9156|exonuclease 1	AF042282|EXO1|9156|exonuclease 1	AF091740|EXO1|9156|exonuclease 1	AF060479|EXO1|9156|exonuclease 1	AF084974|EXO1|9156|exonuclease 1
hg19_v1_chr8_+_87111132_87111157	0.077512	SOX2.p2	BC065207|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2	AK096027|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2	NM_152565|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2	AY079172|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2
hg19_v1_chr7_+_129015483_129015483	0.0775117	SOX2.p2	AK316073|AHCYL2|23382|adenosylhomocysteinase-like 2	NM_001130722|AHCYL2|23382|adenosylhomocysteinase-like 2
hg19_v1_chr12_-_87232635_87232680	0.0774961	SOX2.p2	BC035851|MGAT4C|25834|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)	NM_013244|MGAT4C|25834|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
hg19_v1_chr14_+_96846021_96846021	0.0774323	SOX2.p2	BC004818|C14orf129|51527|chromosome 14 open reading frame 129	NM_016472|C14orf129|51527|chromosome 14 open reading frame 129
hg19_v1_chr6_-_46293404_46293410	0.0773476	SOX2.p2	D83407|RCAN2|10231|regulator of calcineurin 2	BC038509|RCAN2|10231|regulator of calcineurin 2
hg19_v1_chr2_+_231921625_231921736	0.0773236	SOX2.p2	BC020223|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC007535|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC073833|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC039845|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC047897|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	D44466|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
hg19_v1_chr11_+_6942204_6942232	0.0771455	SOX2.p2	BC137208|OR2D3|120775|olfactory receptor, family 2, subfamily D, member 3	BC137209|OR2D3|120775|olfactory receptor, family 2, subfamily D, member 3	NM_001004684|OR2D3|120775|olfactory receptor, family 2, subfamily D, member 3
hg19_v1_chr1_-_11751677_11751706	0.0769513	SOX2.p2	NM_001127325|MAD2L2|10459|MAD2 mitotic arrest deficient-like 2 (yeast)	AK094316|MAD2L2|10459|MAD2 mitotic arrest deficient-like 2 (yeast)
hg19_v1_chr13_-_30169584_30169658	0.0768255	SOX2.p2	X59155|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	X57303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	AK312818|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	BC063303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
hg19_v1_chr6_-_32908583_32908846	0.076796	SOX2.p2	CR407606|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	DQ891141|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	DQ894320|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	BC027175|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	Z23139|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AB209577|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AK315979|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AK295872|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AY645722|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	U15085|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	NM_002118|HLA-DMB|3109|major histocompatibility complex, class II, DM beta
hg19_v1_chr19_+_10764987_10765105	0.0765586	SOX2.p2	U10324|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	BC048314|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	BC064836|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AK293170|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AK291205|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AK294084|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	X98264|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AK291617|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	BC001770|ILF3|3609|interleukin enhancer binding factor 3, 90kDa
hg19_v1_chr10_+_104535887_104536023	0.076515	SOX2.p2	NM_017787|C10orf26|54838|chromosome 10 open reading frame 26	AY656171|C10orf26|54838|chromosome 10 open reading frame 26	AK056285|C10orf26|54838|chromosome 10 open reading frame 26	BC113857|C10orf26|54838|chromosome 10 open reading frame 26	BC114465|C10orf26|54838|chromosome 10 open reading frame 26
hg19_v1_chr8_+_87878672_87878675	0.0763996	SOX2.p2	AK093121|CNBD1|168975|cyclic nucleotide binding domain containing 1	BC117326|CNBD1|168975|cyclic nucleotide binding domain containing 1	BC117328|CNBD1|168975|cyclic nucleotide binding domain containing 1	NM_173538|CNBD1|168975|cyclic nucleotide binding domain containing 1
hg19_v1_chr11_-_47510518_47510576	0.0763944	SOX2.p2	AK304430|CELF1|10658|CUGBP, Elav-like family member 1	AJ007988|CELF1|10658|CUGBP, Elav-like family member 1	DQ893717|CELF1|10658|CUGBP, Elav-like family member 1	AF248648|CELF1|10658|CUGBP, Elav-like family member 1	NM_001025596|CELF1|10658|CUGBP, Elav-like family member 1	NM_001172640|CELF1|10658|CUGBP, Elav-like family member 1	AF267533|CELF1|10658|CUGBP, Elav-like family member 1	AF267534|CELF1|10658|CUGBP, Elav-like family member 1
hg19_v1_chr17_-_3571819_3571878	0.0763508	SOX2.p2	AF277318|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	U90913|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	AF234997|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	AK001327|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	AK315408|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	BC023980|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3
hg19_v1_chr4_+_84457390_84457772	0.0762561	SOX2.p2	DQ345298|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9	BC090956|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9	AY358100|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9	NM_032717|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9	DQ324782|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9
hg19_v1_chr9_-_4726226_4726249	0.0762069	SOX2.p2	NM_001199856|AK3|50808|adenylate kinase 3	AK124824|AK3|50808|adenylate kinase 3
hg19_v1_chr10_-_126138549_126138606	0.0762042	SOX2.p2	NM_001146340|NKX1-2|390010|NK1 homeobox 2
hg19_v1_chr11_-_105892908_105893011	0.0761788	SOX2.p2	AL834523|KIAA1826|84437|KIAA1826	BC041118|KIAA1826|84437|KIAA1826	AB058729|KIAA1826|84437|KIAA1826	NM_032424|KIAA1826|84437|KIAA1826
hg19_v1_chr3_-_185655648_185655774	0.0761205	SOX2.p2	DQ890937|TRA2B|6434|transformer 2 beta homolog (Drosophila)	EU176532|TRA2B|6434|transformer 2 beta homolog (Drosophila)	U61267|TRA2B|6434|transformer 2 beta homolog (Drosophila)	U68063|TRA2B|6434|transformer 2 beta homolog (Drosophila)	AK301118|TRA2B|6434|transformer 2 beta homolog (Drosophila)	BC005898|TRA2B|6434|transformer 2 beta homolog (Drosophila)
hg19_v1_chrX_-_71792897_71792952	0.0760197	SOX2.p2	AK074326|HDAC8|55869|histone deacetylase 8	AK296641|HDAC8|55869|histone deacetylase 8	NM_001166418|HDAC8|55869|histone deacetylase 8	NM_001166419|HDAC8|55869|histone deacetylase 8	NM_001166420|HDAC8|55869|histone deacetylase 8	NM_001166422|HDAC8|55869|histone deacetylase 8	NM_001166448|HDAC8|55869|histone deacetylase 8	NM_018486|HDAC8|55869|histone deacetylase 8
hg19_v1_chr19_+_12949258_12949385	0.0759104	SOX2.p2	NM_014975|MAST1|22983|microtubule associated serine/threonine kinase 1	AB023190|MAST1|22983|microtubule associated serine/threonine kinase 1	AK297553|MAST1|22983|microtubule associated serine/threonine kinase 1
hg19_v1_chr16_-_15736964_15737022	0.0759027	SOX2.p2	BC137165|KIAA0430|9665|KIAA0430	BC137170|KIAA0430|9665|KIAA0430	BC144514|KIAA0430|9665|KIAA0430	BC144515|KIAA0430|9665|KIAA0430	AK302667|KIAA0430|9665|KIAA0430	AK095840|KIAA0430|9665|KIAA0430	BC064914|KIAA0430|9665|KIAA0430	NM_001184998|KIAA0430|9665|KIAA0430	NM_001184999|KIAA0430|9665|KIAA0430	NM_014647|KIAA0430|9665|KIAA0430
hg19_v1_chr22_-_23484208_23484279	0.0756536	SOX2.p2	BC008986|RTDR1|27156|rhabdoid tumor deletion region gene 1	AF133587|RTDR1|27156|rhabdoid tumor deletion region gene 1	NM_014433|RTDR1|27156|rhabdoid tumor deletion region gene 1	AK299530|RTDR1|27156|rhabdoid tumor deletion region gene 1	AK310327|RTDR1|27156|rhabdoid tumor deletion region gene 1
hg19_v1_chr8_+_61429724_61429777	0.0756507	SOX2.p2	M28213|RAB2A|5862|RAB2A, member RAS oncogene family	AF498930|RAB2A|5862|RAB2A, member RAS oncogene family	BT019695|RAB2A|5862|RAB2A, member RAS oncogene family
hg19_v1_chr3_-_186079776_186080093	0.0756441	SOX2.p2	BC089411|DGKG|1608|diacylglycerol kinase, gamma 90kDa	AB209033|DGKG|1608|diacylglycerol kinase, gamma 90kDa	AK314192|DGKG|1608|diacylglycerol kinase, gamma 90kDa	D26135|DGKG|1608|diacylglycerol kinase, gamma 90kDa	AK304440|DGKG|1608|diacylglycerol kinase, gamma 90kDa	NM_001080744|DGKG|1608|diacylglycerol kinase, gamma 90kDa	NM_001080745|DGKG|1608|diacylglycerol kinase, gamma 90kDa	NM_001346|DGKG|1608|diacylglycerol kinase, gamma 90kDa
hg19_v1_chr10_-_33224485_33224485	0.0756051	SOX2.p2	AM393197|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)	DQ891069|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)	DQ894251|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)	NM_033668|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
hg19_v1_chr19_-_5340700_5340889	0.075454	SOX2.p2	AB209333|PTPRS|5802|protein tyrosine phosphatase, receptor type, S	NM_002850|PTPRS|5802|protein tyrosine phosphatase, receptor type, S	NM_130853|PTPRS|5802|protein tyrosine phosphatase, receptor type, S	NM_130854|PTPRS|5802|protein tyrosine phosphatase, receptor type, S	NM_130855|PTPRS|5802|protein tyrosine phosphatase, receptor type, S
hg19_v1_chr1_+_63833324_63833337	0.0750274	SOX2.p2	AK022700|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)	BC001253|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)	AF102851|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)
hg19_v1_chr17_-_3867585_3867818	0.0749955	SOX2.p2	DQ893317|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	EU176809|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	Z69881|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	AF068220|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	BC035729|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	AK292716|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	NM_005173|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	NM_174953|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	NM_174954|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	NM_174955|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	NM_174956|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	NM_174957|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	NM_174958|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous
hg19_v1_chr3_-_139258531_139258670	0.0749379	SOX2.p2	AK309492|RBP1|5947|retinol binding protein 1, cellular	NM_001130992|RBP1|5947|retinol binding protein 1, cellular	NM_001130993|RBP1|5947|retinol binding protein 1, cellular	NM_002899|RBP1|5947|retinol binding protein 1, cellular
hg19_v1_chr1_-_33813261_33813332	0.0749277	SOX2.p2	
hg19_v1_chr12_-_72057523_72057673	0.0748233	SOX2.p2	AB011118|ZFC3H1|196441|zinc finger, C3H1-type containing	BC073843|ZFC3H1|196441|zinc finger, C3H1-type containing	BC064336|ZFC3H1|196441|zinc finger, C3H1-type containing	BX647709|ZFC3H1|196441|zinc finger, C3H1-type containing	BC015679|ZFC3H1|196441|zinc finger, C3H1-type containing
hg19_v1_chr1_-_21503304_21503344	0.0747195	SOX2.p2	BC072413|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3	AB209119|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg19_v1_chr13_-_48877796_48877822	0.0744042	SOX2.p2	
hg19_v1_chr1_-_21113090_21113146	0.0741278	SOX2.p2	BC053327|HP1BP3|50809|heterochromatin protein 1, binding protein 3	BC032139|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg19_v1_chr9_+_129677046_129677162	0.074104	SOX2.p2	AB002349|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	NM_001190729|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	NM_001190730|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	NM_014636|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	BC033708|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	BC019329|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	AK299149|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	BC032372|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1
hg19_v1_chrX_-_117250624_117250827	0.0740737	SOX2.p2	AL591986|KLHL13|90293|kelch-like 13 (Drosophila)	AK316509|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168302|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168303|KLHL13|90293|kelch-like 13 (Drosophila)
hg19_v1_chr4_-_76878558_76878565	0.0738726	SOX2.p2	AF132198|SDAD1|55153|SDA1 domain containing 1
hg19_v1_chr3_-_194354304_194354423	0.0738374	SOX2.p2	AK126914|TMEM44|93109|transmembrane protein 44	BC039506|TMEM44|93109|transmembrane protein 44
hg19_v1_chr5_+_148961035_148961134	0.0738031	SOX2.p2	AK300559|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37	AK316002|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37	BC041325|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37	NM_001001669|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37
hg19_v1_chr15_+_23810808_23810928	0.07375	SOX2.p2	BC044639|MKRN3|7681|makorin ring finger protein 3	BC070293|MKRN3|7681|makorin ring finger protein 3	EU446987|MKRN3|7681|makorin ring finger protein 3
hg19_v1_chr10_+_104221144_104221157	0.0737423	SOX2.p2	AK296583|TMEM180|79847|transmembrane protein 180
hg19_v1_chr14_-_20774089_20774125	0.0737363	SOX2.p2	BX248066|TTC5|91875|tetratricopeptide repeat domain 5	BC008647|TTC5|91875|tetratricopeptide repeat domain 5	EU832467|TTC5|91875|tetratricopeptide repeat domain 5	BC030822|TTC5|91875|tetratricopeptide repeat domain 5	BX640732|TTC5|91875|tetratricopeptide repeat domain 5	BC053538|TTC5|91875|tetratricopeptide repeat domain 5	BX648584|TTC5|91875|tetratricopeptide repeat domain 5
hg19_v1_chr11_-_119234628_119234857	0.0736468	SOX2.p2	AF079564|USP2|9099|ubiquitin specific peptidase 2	AK301805|USP2|9099|ubiquitin specific peptidase 2	AK292255|USP2|9099|ubiquitin specific peptidase 2
hg19_v1_chr2_-_75788079_75788102	0.0735894	SOX2.p2	NM_001135032|FAM176A|84141|family with sequence similarity 176, member A
hg19_v1_chr3_-_128712918_128712985	0.073542	SOX2.p2	AK056377|KIAA1257|57501|KIAA1257	BC038736|KIAA1257|57501|KIAA1257	AB033083|KIAA1257|57501|KIAA1257	NM_020741|KIAA1257|57501|KIAA1257
hg19_v1_chr12_-_30848805_30848928	0.0734897	SOX2.p2	NM_006390|IPO8|10526|importin 8
hg19_v1_chr3_-_149095333_149095399	0.0733303	SOX2.p2	CR456953|TM4SF1|4071|transmembrane 4 L six family member 1	BC010166|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr1_-_235490801_235490801	0.0733107	SOX2.p2	AB210032|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	NM_001206794|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)
hg19_v1_chr3_-_149095413_149095452	0.0732665	SOX2.p2	BC008442|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr18_-_25757351_25757444	0.0731971	SOX2.p2	NM_001792|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)
hg19_v1_chr1_+_40943301_40943301	0.0731804	SOX2.p2	AK122618|ZNF642|339559|zinc finger protein 642	NM_198494|ZNF642|339559|zinc finger protein 642
hg19_v1_chr12_-_72057389_72057432	0.073043	SOX2.p2	
hg19_v1_chr11_-_66313474_66313501	0.0730109	SOX2.p2	BC057833|ZDHHC24|254359|zinc finger, DHHC-type containing 24
hg19_v1_chr17_+_46125675_46125723	0.0729101	SOX2.p2	NM_003204|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1	BC010623|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1	AK090459|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1
hg19_v1_chr2_-_65357191_65357248	0.0728916	SOX2.p2	BC000905|RAB1A|5861|RAB1A, member RAS oncogene family	BX571747|RAB1A|5861|RAB1A, member RAS oncogene family	AL050268|RAB1A|5861|RAB1A, member RAS oncogene family	AK303678|RAB1A|5861|RAB1A, member RAS oncogene family	AK055927|RAB1A|5861|RAB1A, member RAS oncogene family	AK315495|RAB1A|5861|RAB1A, member RAS oncogene family
hg19_v1_chr2_+_201676644_201676648	0.0728514	SOX2.p2	D13630|BZW1|9689|basic leucine zipper and W2 domains 1	BC001804|BZW1|9689|basic leucine zipper and W2 domains 1
hg19_v1_chr13_+_31774122_31774298	0.0727693	SOX2.p2	AK291273|B3GALTL|145173|beta 1,3-galactosyltransferase-like	BC068595|B3GALTL|145173|beta 1,3-galactosyltransferase-like	AB101481|B3GALTL|145173|beta 1,3-galactosyltransferase-like	AY190526|B3GALTL|145173|beta 1,3-galactosyltransferase-like
hg19_v1_chr22_+_31366662_31366813	0.0727594	SOX2.p2	
hg19_v1_chr2_-_3605918_3605924	0.072551	SOX2.p2	BC002973|RNASEH1|246243|ribonuclease H1
hg19_v1_chrX_+_17653412_17653412	0.0724226	SOX2.p2	AY456992|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)	NM_001136024|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)
hg19_v1_chr12_+_27397077_27397171	0.0724146	SOX2.p2	NM_015000|STK38L|23012|serine/threonine kinase 38 like	BC028603|STK38L|23012|serine/threonine kinase 38 like
hg19_v1_chr6_+_3077031_3077098	0.0723857	SOX2.p2	BC126254|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1	BC126256|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1	HQ258488|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1	NM_003804|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1	U50062|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1	AK304701|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1
hg19_v1_chr5_+_140501579_140501580	0.072255	SOX2.p2	AF152497|PCDHB4|56131|protocadherin beta 4	AF217754|PCDHB4|56131|protocadherin beta 4	BC098139|PCDHB4|56131|protocadherin beta 4	BC098346|PCDHB4|56131|protocadherin beta 4	NM_018938|PCDHB4|56131|protocadherin beta 4
hg19_v1_chr17_+_46125725_46125780	0.0718926	SOX2.p2	X77366|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1
hg19_v1_chr1_-_212588235_212588236	0.0718512	SOX2.p2	AK001736|TMEM206|55248|transmembrane protein 206
hg19_v1_chr3_-_69129502_69129544	0.0717416	SOX2.p2	AM392893|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AM393088|UBA3|9039|ubiquitin-like modifier activating enzyme 3	CR533537|UBA3|9039|ubiquitin-like modifier activating enzyme 3	DQ893167|UBA3|9039|ubiquitin-like modifier activating enzyme 3	DQ896465|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK314751|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK289392|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK002159|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AL117566|UBA3|9039|ubiquitin-like modifier activating enzyme 3	BC022853|UBA3|9039|ubiquitin-like modifier activating enzyme 3	NM_003968|UBA3|9039|ubiquitin-like modifier activating enzyme 3	NM_198195|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK298878|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK316540|UBA3|9039|ubiquitin-like modifier activating enzyme 3
hg19_v1_chr19_+_58095507_58095627	0.0717356	SOX2.p2	AK128340|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)	AK092538|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)	BC103957|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)	BC103958|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)	BC103959|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)	NM_001010879|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)
hg19_v1_chr11_-_125550674_125550792	0.0716271	SOX2.p2	AB451476|ACRV1|56|acrosomal vesicle protein 1	M82967|ACRV1|56|acrosomal vesicle protein 1	M82968|ACRV1|56|acrosomal vesicle protein 1	AK223335|ACRV1|56|acrosomal vesicle protein 1	BC014588|ACRV1|56|acrosomal vesicle protein 1	NM_001612|ACRV1|56|acrosomal vesicle protein 1	NM_020069|ACRV1|56|acrosomal vesicle protein 1	NM_020107|ACRV1|56|acrosomal vesicle protein 1	NM_020108|ACRV1|56|acrosomal vesicle protein 1
hg19_v1_chr4_+_3318244_3318361	0.0714893	SOX2.p2	BC106944|RGS12|6002|regulator of G-protein signaling 12
hg19_v1_chr11_+_18720342_18720355	0.071155	SOX2.p2	BC035692|TMEM86A|144110|transmembrane protein 86A	NM_153347|TMEM86A|144110|transmembrane protein 86A
hg19_v1_chr13_-_22033310_22033470	0.0709739	SOX2.p2	BC110517|ZDHHC20|253832|zinc finger, DHHC-type containing 20	AK295804|ZDHHC20|253832|zinc finger, DHHC-type containing 20	BC050367|ZDHHC20|253832|zinc finger, DHHC-type containing 20	AK299354|ZDHHC20|253832|zinc finger, DHHC-type containing 20
hg19_v1_chr14_-_105262078_105262085	0.0709539	SOX2.p2	NM_001014431|AKT1|207|v-akt murine thymoma viral oncogene homolog 1	NM_001014432|AKT1|207|v-akt murine thymoma viral oncogene homolog 1
hg19_v1_chr12_-_56615679_56615772	0.070855	SOX2.p2	BC024284|RNF41|10193|ring finger protein 41	AK300752|RNF41|10193|ring finger protein 41	NM_005785|RNF41|10193|ring finger protein 41	NM_194358|RNF41|10193|ring finger protein 41	AK314811|RNF41|10193|ring finger protein 41	AK304576|RNF41|10193|ring finger protein 41	NM_194359|RNF41|10193|ring finger protein 41
hg19_v1_chr1_-_154580677_154580723	0.0707504	SOX2.p2	AK304153|ADAR|103|adenosine deaminase, RNA-specific	X79449|ADAR|103|adenosine deaminase, RNA-specific	NM_001111|ADAR|103|adenosine deaminase, RNA-specific	NM_015840|ADAR|103|adenosine deaminase, RNA-specific	NM_015841|ADAR|103|adenosine deaminase, RNA-specific
hg19_v1_chr6_-_18155283_18155373	0.0706854	SOX2.p2	S62904|TPMT|7172|thiopurine S-methyltransferase	AK310420|TPMT|7172|thiopurine S-methyltransferase	U12387|TPMT|7172|thiopurine S-methyltransferase	BC005339|TPMT|7172|thiopurine S-methyltransferase	BC009596|TPMT|7172|thiopurine S-methyltransferase	NM_000367|TPMT|7172|thiopurine S-methyltransferase
hg19_v1_chr4_+_72204769_72204965	0.0706843	SOX2.p2	BC030977|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	NM_003759|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF007216|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AK308038|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4
hg19_v1_chr13_+_34392254_34392315	0.0706787	SOX2.p2	AK296527|RFC3|5983|replication factor C (activator 1) 3, 38kDa	BC000149|RFC3|5983|replication factor C (activator 1) 3, 38kDa	AK222572|RFC3|5983|replication factor C (activator 1) 3, 38kDa	AK312544|RFC3|5983|replication factor C (activator 1) 3, 38kDa	L07541|RFC3|5983|replication factor C (activator 1) 3, 38kDa	DQ890955|RFC3|5983|replication factor C (activator 1) 3, 38kDa	DQ894118|RFC3|5983|replication factor C (activator 1) 3, 38kDa	BT019668|RFC3|5983|replication factor C (activator 1) 3, 38kDa
hg19_v1_chr4_+_187148624_187148712	0.0706446	SOX2.p2	AK292624|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	AK297672|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	M13143|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	NM_000892|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	AK313378|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	BC117349|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	BC117351|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	BC143911|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1
hg19_v1_chr17_-_62050200_62050277	0.0705629	SOX2.p2	AY212253|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit	M81758|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit	NM_000334|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit
hg19_v1_chr20_-_35201677_35201706	0.0705084	SOX2.p2	
hg19_v1_chr1_+_22379798_22379813	0.0704732	SOX2.p2	AL121737|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)
hg19_v1_chr1_+_50571963_50571963	0.0703801	SOX2.p2	AY033996|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001144775|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg19_v1_chr9_-_125590809_125590934	0.0703515	SOX2.p2	BC017227|PDCL|5082|phosducin-like	AL117602|PDCL|5082|phosducin-like	AF031463|PDCL|5082|phosducin-like	AK313429|PDCL|5082|phosducin-like	NM_005388|PDCL|5082|phosducin-like
hg19_v1_chr7_+_23286384_23286385	0.0703041	SOX2.p2	AK297051|GPNMB|10457|glycoprotein (transmembrane) nmb	X76534|GPNMB|10457|glycoprotein (transmembrane) nmb
hg19_v1_chr4_-_146859568_146859786	0.0702682	SOX2.p2	AK091130|ZNF827|152485|zinc finger protein 827	NM_178835|ZNF827|152485|zinc finger protein 827	BC117407|ZNF827|152485|zinc finger protein 827	BC143577|ZNF827|152485|zinc finger protein 827	AF450485|ZNF827|152485|zinc finger protein 827	AK225805|ZNF827|152485|zinc finger protein 827
hg19_v1_chr4_-_185395616_185395746	0.0702502	SOX2.p2	X15949|IRF2|3660|interferon regulatory factor 2	DQ409328|IRF2|3660|interferon regulatory factor 2	AK312953|IRF2|3660|interferon regulatory factor 2	NM_002199|IRF2|3660|interferon regulatory factor 2
hg19_v1_chr1_-_23885916_23886053	0.0701631	SOX2.p2	BT006791|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	DQ892504|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	DQ895539|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	DQ895717|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	BC003107|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	D28449|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	AK290003|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
hg19_v1_chr5_+_34656595_34656599	0.0701124	SOX2.p2	AB037755|RAI14|26064|retinoic acid induced 14	NM_001145520|RAI14|26064|retinoic acid induced 14
hg19_v1_chr13_+_31774087_31774119	0.0700577	SOX2.p2	NM_194318|B3GALTL|145173|beta 1,3-galactosyltransferase-like
hg19_v1_chr11_+_69455978_69456081	0.0700356	SOX2.p2	AM393193|CCND1|595|cyclin D1	AM393430|CCND1|595|cyclin D1	AM393593|CCND1|595|cyclin D1	DQ891848|CCND1|595|cyclin D1	DQ895038|CCND1|595|cyclin D1	BT019844|CCND1|595|cyclin D1	BT019845|CCND1|595|cyclin D1	CR536538|CCND1|595|cyclin D1	CR542099|CCND1|595|cyclin D1
hg19_v1_chr9_+_133971862_133971894	0.0700008	SOX2.p2	NM_001185095|AIF1L|83543|allograft inflammatory factor 1-like	NM_001185096|AIF1L|83543|allograft inflammatory factor 1-like	NM_031426|AIF1L|83543|allograft inflammatory factor 1-like
hg19_v1_chr19_+_11998609_11998738	0.0699987	SOX2.p2	BC051309|ZNF69|7620|zinc finger protein 69	NM_021915|ZNF69|7620|zinc finger protein 69	EU446913|ZNF69|7620|zinc finger protein 69
hg19_v1_chr11_+_120195837_120195837	0.0699645	SOX2.p2	AK128040|TMEM136|219902|transmembrane protein 136	NM_001198670|TMEM136|219902|transmembrane protein 136	NM_001198671|TMEM136|219902|transmembrane protein 136	NM_001198672|TMEM136|219902|transmembrane protein 136	NM_001198673|TMEM136|219902|transmembrane protein 136	NM_001198674|TMEM136|219902|transmembrane protein 136	NM_001198675|TMEM136|219902|transmembrane protein 136	NM_174926|TMEM136|219902|transmembrane protein 136
hg19_v1_chr2_+_173420873_173420878	0.0698924	SOX2.p2	DQ891300|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1	DQ893348|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1	DQ894484|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1	DQ896668|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1	DQ234350|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1
hg19_v1_chr2_+_37311593_37311702	0.0698482	SOX2.p2	NM_174931|CCDC75|253635|coiled-coil domain containing 75	AK095667|CCDC75|253635|coiled-coil domain containing 75	BC071798|CCDC75|253635|coiled-coil domain containing 75	AK289504|CCDC75|253635|coiled-coil domain containing 75	AK294697|CCDC75|253635|coiled-coil domain containing 75
hg19_v1_chr8_-_38326115_38326188	0.0698209	SOX2.p2	BC018128|FGFR1|2260|fibroblast growth factor receptor 1	M60485|FGFR1|2260|fibroblast growth factor receptor 1	X66945|FGFR1|2260|fibroblast growth factor receptor 1	AB208919|FGFR1|2260|fibroblast growth factor receptor 1	BC015035|FGFR1|2260|fibroblast growth factor receptor 1	AK222718|FGFR1|2260|fibroblast growth factor receptor 1	AK223126|FGFR1|2260|fibroblast growth factor receptor 1
hg19_v1_chrX_+_99899388_99899402	0.069718	SOX2.p2	BC020733|SRPX2|27286|sushi-repeat containing protein, X-linked 2
hg19_v1_chr19_-_52408240_52408304	0.0695546	SOX2.p2	AK000909|ZNF649|65251|zinc finger protein 649	AL713677|ZNF649|65251|zinc finger protein 649	AK225480|ZNF649|65251|zinc finger protein 649	BC005368|ZNF649|65251|zinc finger protein 649	AK315487|ZNF649|65251|zinc finger protein 649	NM_023074|ZNF649|65251|zinc finger protein 649
hg19_v1_chr6_+_132873829_132873831	0.0694872	SOX2.p2	AY183468|TAAR8|83551|trace amine associated receptor 8	BC069166|TAAR8|83551|trace amine associated receptor 8	NM_053278|TAAR8|83551|trace amine associated receptor 8
hg19_v1_chr17_+_47074749_47074912	0.0692569	SOX2.p2	NM_001160423|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1	NM_006546|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1	AF198254|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1	AK313229|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1
hg19_v1_chr17_-_655468_655503	0.0691167	SOX2.p2	NM_015721|GEMIN4|50628|gem (nuclear organelle) associated protein 4
hg19_v1_chr11_+_101983170_101983244	0.0690942	SOX2.p2	NM_001195045|YAP1|10413|Yes-associated protein 1	AK316116|YAP1|10413|Yes-associated protein 1
hg19_v1_chr14_-_105262015_105262075	0.0690826	SOX2.p2	BC000479|AKT1|207|v-akt murine thymoma viral oncogene homolog 1	BC084538|AKT1|207|v-akt murine thymoma viral oncogene homolog 1
hg19_v1_chr14_-_23755232_23755307	0.0690646	SOX2.p2	AB037864|HOMEZ|57594|homeobox and leucine zipper encoding	AF463523|HOMEZ|57594|homeobox and leucine zipper encoding	AK296927|HOMEZ|57594|homeobox and leucine zipper encoding
hg19_v1_chr10_-_102045948_102046113	0.0689164	SOX2.p2	BC020494|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2	AY278457|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2	AK054697|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2	NM_001001342|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2
hg19_v1_chr18_-_44497307_44497520	0.0688211	SOX2.p2	AF077953|PIAS2|9063|protein inhibitor of activated STAT, 2	AF077954|PIAS2|9063|protein inhibitor of activated STAT, 2	DQ896421|PIAS2|9063|protein inhibitor of activated STAT, 2	EU176432|PIAS2|9063|protein inhibitor of activated STAT, 2	AK308143|PIAS2|9063|protein inhibitor of activated STAT, 2	BC111060|PIAS2|9063|protein inhibitor of activated STAT, 2	BC015190|PIAS2|9063|protein inhibitor of activated STAT, 2	AK294801|PIAS2|9063|protein inhibitor of activated STAT, 2	NM_004671|PIAS2|9063|protein inhibitor of activated STAT, 2	NM_173206|PIAS2|9063|protein inhibitor of activated STAT, 2
hg19_v1_chr7_-_27142301_27142393	0.0688185	SOX2.p2	AK096742|HOXA2|3199|homeobox A2	NM_006735|HOXA2|3199|homeobox A2
hg19_v1_chr11_+_63754300_63754327	0.0687812	SOX2.p2	AK307413|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1
hg19_v1_chr7_+_100209724_100209815	0.0686374	SOX2.p2	NM_001040097|MOSPD3|64598|motile sperm domain containing 3
hg19_v1_chr8_+_23386468_23386579	0.0685238	SOX2.p2	AK074708|SLC25A37|51312|solute carrier family 25, member 37	AK223194|SLC25A37|51312|solute carrier family 25, member 37	AF223466|SLC25A37|51312|solute carrier family 25, member 37	AY032628|SLC25A37|51312|solute carrier family 25, member 37	BC015013|SLC25A37|51312|solute carrier family 25, member 37	HQ258387|SLC25A37|51312|solute carrier family 25, member 37	AK075313|SLC25A37|51312|solute carrier family 25, member 37	AL833186|SLC25A37|51312|solute carrier family 25, member 37
hg19_v1_chr3_-_57583090_57583148	0.0685063	SOX2.p2	BC022866|ARF4|378|ADP-ribosylation factor 4	BC016325|ARF4|378|ADP-ribosylation factor 4
hg19_v1_chr2_-_188419185_188419218	0.0683794	SOX2.p2	NM_001032281|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)	NM_006287|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)
hg19_v1_chr17_+_29815018_29815105	0.068373	SOX2.p2	AK097424|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)
hg19_v1_chr3_+_184032849_184033283	0.0683539	SOX2.p2	NM_182917|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AK131407|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF281070|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AY082886|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF002815|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AB210013|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg19_v1_chr1_-_27998719_27998759	0.0681931	SOX2.p2	NM_002038|IFI6|2537|interferon, alpha-inducible protein 6	NM_022872|IFI6|2537|interferon, alpha-inducible protein 6	NM_022873|IFI6|2537|interferon, alpha-inducible protein 6
hg19_v1_chr1_+_161129229_161129287	0.0681683	SOX2.p2	NM_001014443|USP21|27005|ubiquitin specific peptidase 21	NM_012475|USP21|27005|ubiquitin specific peptidase 21	AB208899|USP21|27005|ubiquitin specific peptidase 21
hg19_v1_chr7_+_44836166_44836268	0.0680871	SOX2.p2	BC137057|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC137058|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	NM_021130|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)
hg19_v1_chr4_+_119809978_119810191	0.0680779	SOX2.p2	AL833547|SYNPO2|171024|synaptopodin 2	NM_001128933|SYNPO2|171024|synaptopodin 2	NM_001128934|SYNPO2|171024|synaptopodin 2	NM_133477|SYNPO2|171024|synaptopodin 2	BC150629|SYNPO2|171024|synaptopodin 2	AK307711|SYNPO2|171024|synaptopodin 2	CR936673|SYNPO2|171024|synaptopodin 2	AK304121|SYNPO2|171024|synaptopodin 2	AL832031|SYNPO2|171024|synaptopodin 2	AL833294|SYNPO2|171024|synaptopodin 2	AL832363|SYNPO2|171024|synaptopodin 2	BC136256|SYNPO2|171024|synaptopodin 2	AM392848|SYNPO2|171024|synaptopodin 2	AM393854|SYNPO2|171024|synaptopodin 2	EU481975|SYNPO2|171024|synaptopodin 2
hg19_v1_chr12_-_45270071_45270139	0.0680117	SOX2.p2	AK056082|NELL2|4753|NEL-like 2 (chicken)	AK297521|NELL2|4753|NEL-like 2 (chicken)	AK309825|NELL2|4753|NEL-like 2 (chicken)	D83018|NELL2|4753|NEL-like 2 (chicken)
hg19_v1_chr6_-_105627857_105627857	0.0679816	SOX2.p2	AK314101|POPDC3|64208|popeye domain containing 3	NM_022361|POPDC3|64208|popeye domain containing 3
hg19_v1_chr19_-_59031167_59031210	0.0679375	SOX2.p2	AK027392|ZBTB45|84878|zinc finger and BTB domain containing 45
hg19_v1_chr3_+_155588423_155588445	0.0678374	SOX2.p2	AK302148|GMPS|8833|guanine monphosphate synthetase	AK223399|GMPS|8833|guanine monphosphate synthetase	AK300787|GMPS|8833|guanine monphosphate synthetase
hg19_v1_chr12_+_7055736_7055739	0.0678305	SOX2.p2	AK313379|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	NM_080548|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6
hg19_v1_chr12_-_30848744_30848797	0.0678266	SOX2.p2	U77494|IPO8|10526|importin 8
hg19_v1_chr9_-_88715024_88715145	0.0678236	SOX2.p2	AK075557|GOLM1|51280|golgi membrane protein 1	AK092943|GOLM1|51280|golgi membrane protein 1	NM_177937|GOLM1|51280|golgi membrane protein 1
hg19_v1_chr15_+_51973549_51973713	0.0677915	SOX2.p2	AF453583|SCG3|29106|secretogranin III	NM_001165257|SCG3|29106|secretogranin III	NM_013243|SCG3|29106|secretogranin III	AF078851|SCG3|29106|secretogranin III	AY359093|SCG3|29106|secretogranin III	AK075314|SCG3|29106|secretogranin III	AK296466|SCG3|29106|secretogranin III	AK290175|SCG3|29106|secretogranin III
hg19_v1_chr1_+_26737306_26737381	0.0677812	SOX2.p2	AF521099|LIN28A|79727|lin-28 homolog A (C. elegans)	AK022519|LIN28A|79727|lin-28 homolog A (C. elegans)	DQ893398|LIN28A|79727|lin-28 homolog A (C. elegans)	DQ896719|LIN28A|79727|lin-28 homolog A (C. elegans)
hg19_v1_chr17_-_61819120_61819163	0.0677544	SOX2.p2	BC043641|STRADA|92335|STE20-related kinase adaptor alpha	AL832407|STRADA|92335|STE20-related kinase adaptor alpha	AK301331|STRADA|92335|STE20-related kinase adaptor alpha	AK075005|STRADA|92335|STE20-related kinase adaptor alpha
hg19_v1_chr17_+_46125724_46125724	0.0676559	SOX2.p2	AL833530|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1
hg19_v1_chr3_-_185655806_185655824	0.0676405	SOX2.p2	AK098191|TRA2B|6434|transformer 2 beta homolog (Drosophila)
hg19_v1_chr5_-_82373253_82373271	0.0674789	SOX2.p2	NM_174909|TMEM167A|153339|transmembrane protein 167A
hg19_v1_chr14_+_52456322_52456357	0.0672327	SOX2.p2	EU446806|C14orf166|51637|chromosome 14 open reading frame 166	AY817175|C14orf166|51637|chromosome 14 open reading frame 166
hg19_v1_chr10_-_127408000_127408068	0.0672185	SOX2.p2	AK094354|FLJ37035|399821|uncharacterized LOC399821
hg19_v1_chr1_+_118472364_118472393	0.0672128	SOX2.p2	NM_006784|WDR3|10885|WD repeat domain 3	AK292438|WDR3|10885|WD repeat domain 3	AF083217|WDR3|10885|WD repeat domain 3
hg19_v1_chr2_-_158731622_158731622	0.0670939	SOX2.p2	BC033867|ACVR1|90|activin A receptor, type I	BC036748|ACVR1|90|activin A receptor, type I	NM_001105|ACVR1|90|activin A receptor, type I
hg19_v1_chr19_-_44809126_44809203	0.0669302	SOX2.p2	AK315242|ZNF235|9310|zinc finger protein 235	BC105807|ZNF235|9310|zinc finger protein 235	BC143484|ZNF235|9310|zinc finger protein 235	BC117215|ZNF235|9310|zinc finger protein 235	BC143482|ZNF235|9310|zinc finger protein 235	AF027513|ZNF235|9310|zinc finger protein 235	AK307103|ZNF235|9310|zinc finger protein 235	AK300317|ZNF235|9310|zinc finger protein 235	NM_004234|ZNF235|9310|zinc finger protein 235
hg19_v1_chr20_-_39317875_39317880	0.0668956	SOX2.p2	BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)	NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)
hg19_v1_chr12_+_27397214_27397236	0.0668037	SOX2.p2	AK304755|STK38L|23012|serine/threonine kinase 38 like
hg19_v1_chr2_-_39664291_39664311	0.0666838	SOX2.p2	BC060880|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3
hg19_v1_chr1_-_223853400_223853435	0.066681	SOX2.p2	NM_001143962|CAPN8|388743|calpain 8
hg19_v1_chr16_+_58498216_58498308	0.0666171	SOX2.p2	AK126574|NDRG4|65009|NDRG family member 4	CR936733|NDRG4|65009|NDRG family member 4
hg19_v1_chr8_-_21988518_21988662	0.0664973	SOX2.p2	NM_005144|HR|55806|hairless homolog (mouse)	NM_018411|HR|55806|hairless homolog (mouse)
hg19_v1_chr9_-_98269686_98269714	0.0664583	SOX2.p2	NM_001083606|PTCH1|5727|patched 1	U43148|PTCH1|5727|patched 1
hg19_v1_chr6_-_31774725_31774765	0.066425	SOX2.p2	AF196468|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC009192|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AF136977|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AJ245416|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	NM_021177|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)
hg19_v1_chr16_+_524843_524856	0.066377	SOX2.p2	AK303061|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)	NM_001142272|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)
hg19_v1_chr1_-_45140062_45140113	0.0663074	SOX2.p2	CR457348|TMEM53|79639|transmembrane protein 53	AK026006|TMEM53|79639|transmembrane protein 53	AK225405|TMEM53|79639|transmembrane protein 53	BC064520|TMEM53|79639|transmembrane protein 53	NM_024587|TMEM53|79639|transmembrane protein 53	AL832539|TMEM53|79639|transmembrane protein 53
hg19_v1_chr12_+_53845884_53845886	0.0662703	SOX2.p2	AB188306|PCBP2|5094|poly(rC) binding protein 2	NM_001098620|PCBP2|5094|poly(rC) binding protein 2	NM_001128911|PCBP2|5094|poly(rC) binding protein 2	NM_001128912|PCBP2|5094|poly(rC) binding protein 2	NM_001128913|PCBP2|5094|poly(rC) binding protein 2	NM_001128914|PCBP2|5094|poly(rC) binding protein 2	NM_005016|PCBP2|5094|poly(rC) binding protein 2	NM_031989|PCBP2|5094|poly(rC) binding protein 2
hg19_v1_chr12_-_102455763_102455791	0.0662249	SOX2.p2	BC010889|CCDC53|51019|coiled-coil domain containing 53
hg19_v1_chr5_-_77806185_77806208	0.066166	SOX2.p2	AK125227|LHFPL2|10184|lipoma HMGIC fusion partner-like 2
hg19_v1_chr1_+_50575465_50575612	0.0660727	SOX2.p2	AK298817|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	AK309653|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg19_v1_chr8_+_64081187_64081213	0.0660352	SOX2.p2	AL831816|YTHDF3|253943|YTH domain family, member 3	AK056219|YTHDF3|253943|YTH domain family, member 3	BC037492|YTHDF3|253943|YTH domain family, member 3	AL832335|YTHDF3|253943|YTH domain family, member 3
hg19_v1_chr1_-_150241210_150241399	0.0659483	SOX2.p2	AF508787|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AY113698|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AY113699|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AF151835|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK075295|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AX775955|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC017699|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC008732|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC001230|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC015568|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK297680|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK298876|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK027879|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK314490|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AX775957|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC020590|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC009501|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)
hg19_v1_chr2_-_27579277_27579386	0.0659284	SOX2.p2	BX647092|GTF3C2|2976|general transcription factor IIIC, polypeptide 2, beta 110kDa
hg19_v1_chr17_-_2240677_2240800	0.0658077	SOX2.p2	NM_018128|TSR1|55720|TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)	AB037822|TSR1|55720|TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)
hg19_v1_chr7_-_115608366_115608366	0.0658036	SOX2.p2	AJ608795|TFEC|22797|transcription factor EC	NM_001244583|TFEC|22797|transcription factor EC
hg19_v1_chr12_+_58176527_58176592	0.0656679	SOX2.p2	NM_001172695|TSFM|10102|Ts translation elongation factor, mitochondrial	NM_001172696|TSFM|10102|Ts translation elongation factor, mitochondrial	NM_001172697|TSFM|10102|Ts translation elongation factor, mitochondrial	NM_005726|TSFM|10102|Ts translation elongation factor, mitochondrial	AK304621|TSFM|10102|Ts translation elongation factor, mitochondrial	AK313453|TSFM|10102|Ts translation elongation factor, mitochondrial	BC022862|TSFM|10102|Ts translation elongation factor, mitochondrial	AK295323|TSFM|10102|Ts translation elongation factor, mitochondrial	AK308981|TSFM|10102|Ts translation elongation factor, mitochondrial	BC093068|TSFM|10102|Ts translation elongation factor, mitochondrial	AF110399|TSFM|10102|Ts translation elongation factor, mitochondrial
hg19_v1_chr6_-_33385662_33385709	0.0656407	SOX2.p2	BC005890|CUTA|51596|cutA divalent cation tolerance homolog (E. coli)	AF106943|CUTA|51596|cutA divalent cation tolerance homolog (E. coli)	BC107751|CUTA|51596|cutA divalent cation tolerance homolog (E. coli)
hg19_v1_chr6_+_131958441_131958524	0.0656189	SOX2.p2	AK024899|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	AK296080|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	AK310691|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	AK315893|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	NM_005021|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	AK292903|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	EF560735|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	DQ234347|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3
hg19_v1_chr2_+_148602569_148602721	0.0656073	SOX2.p2	BC069707|ACVR2A|92|activin A receptor, type IIA	NM_001616|ACVR2A|92|activin A receptor, type IIA	D31770|ACVR2A|92|activin A receptor, type IIA	X62381|ACVR2A|92|activin A receptor, type IIA	BC067416|ACVR2A|92|activin A receptor, type IIA	BC067417|ACVR2A|92|activin A receptor, type IIA	BC067418|ACVR2A|92|activin A receptor, type IIA	X63128|ACVR2A|92|activin A receptor, type IIA
hg19_v1_chr1_+_52521966_52521973	0.065562	SOX2.p2	BC070378|BTF3L4|91408|basic transcription factor 3-like 4	AK027750|BTF3L4|91408|basic transcription factor 3-like 4
hg19_v1_chrX_+_24712063_24712067	0.0654847	SOX2.p2	NM_016937|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit	X06745|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit
hg19_v1_chr1_+_33004969_33005120	0.0654398	SOX2.p2	AK074546|ZBTB8A|653121|zinc finger and BTB domain containing 8A	AY157873|ZBTB8A|653121|zinc finger and BTB domain containing 8A	BC015239|ZBTB8A|653121|zinc finger and BTB domain containing 8A
hg19_v1_chr1_-_21113758_21113796	0.065087	SOX2.p2	BC046170|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg19_v1_chr5_-_176739291_176739291	0.0650411	SOX2.p2	NM_001142935|MXD3|83463|MAX dimerization protein 3	NM_031300|MXD3|83463|MAX dimerization protein 3
hg19_v1_chr5_-_43313581_43313612	0.064964	SOX2.p2	NM_001098272|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	NM_002130|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
hg19_v1_chr4_-_103266286_103266367	0.0648184	SOX2.p2	AB040120|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	NM_022154|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	AK304274|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8
hg19_v1_chr12_-_105478218_105478412	0.0646067	SOX2.p2	EU832777|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	GQ129303|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	AK095827|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	AK300373|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	BC103934|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	BC103935|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	NM_001034173|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2
hg19_v1_chr8_+_29952971_29953028	0.0645933	SOX2.p2	AK075363|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AF161461|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	DQ891897|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	DQ895083|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	CR541735|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	CR541760|LEPROTL1|23484|leptin receptor overlapping transcript-like 1
hg19_v1_chrX_+_53449804_53449889	0.0645917	SOX2.p2	AK304179|RIBC1|158787|RIB43A domain with coiled-coils 1	AK057345|RIBC1|158787|RIB43A domain with coiled-coils 1	NM_144968|RIBC1|158787|RIB43A domain with coiled-coils 1	AK292871|RIBC1|158787|RIB43A domain with coiled-coils 1	AK290346|RIBC1|158787|RIB43A domain with coiled-coils 1	BC036767|RIBC1|158787|RIB43A domain with coiled-coils 1	NM_001031745|RIBC1|158787|RIB43A domain with coiled-coils 1
hg19_v1_chr10_+_102729249_102729303	0.0645635	SOX2.p2	BC051030|SEMA4G|57715|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G	AK297431|SEMA4G|57715|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
hg19_v1_chr17_-_56296965_56296965	0.0645514	SOX2.p2	AK310815|MKS1|54903|Meckel syndrome, type 1	NM_001165927|MKS1|54903|Meckel syndrome, type 1
hg19_v1_chr4_-_83931861_83931962	0.0645433	SOX2.p2	BC109278|LIN54|132660|lin-54 homolog (C. elegans)	BC109277|LIN54|132660|lin-54 homolog (C. elegans)	BX537919|LIN54|132660|lin-54 homolog (C. elegans)	AK294256|LIN54|132660|lin-54 homolog (C. elegans)
hg19_v1_chr3_+_141457035_141457103	0.0645266	SOX2.p2	NM_001201370|RNF7|9616|ring finger protein 7	NM_014245|RNF7|9616|ring finger protein 7	NM_183237|RNF7|9616|ring finger protein 7
hg19_v1_chr12_+_98909405_98909409	0.0643624	SOX2.p2	U09087|TMPO|7112|thymopoietin	U09088|TMPO|7112|thymopoietin	AF070631|TMPO|7112|thymopoietin
hg19_v1_chr13_-_25496913_25497026	0.0643374	SOX2.p2	BC113662|CENPJ|55835|centromere protein J	BC113664|CENPJ|55835|centromere protein J	BC143757|CENPJ|55835|centromere protein J	BC143758|CENPJ|55835|centromere protein J	BC113110|CENPJ|55835|centromere protein J	BC113111|CENPJ|55835|centromere protein J	AL833182|CENPJ|55835|centromere protein J	BC092467|CENPJ|55835|centromere protein J	AF139625|CENPJ|55835|centromere protein J	AK292406|CENPJ|55835|centromere protein J
hg19_v1_chr1_-_101360245_101360290	0.0643047	SOX2.p2	BC014910|EXTL2|2135|exostoses (multiple)-like 2
hg19_v1_chr14_+_103800492_103800528	0.0640992	SOX2.p2	NM_001969|EIF5|1983|eukaryotic translation initiation factor 5
hg19_v1_chr7_+_74072007_74072036	0.0640159	SOX2.p2	AK292832|GTF2I|2969|general transcription factor IIi	AF015553|GTF2I|2969|general transcription factor IIi	NM_001163636|GTF2I|2969|general transcription factor IIi	NM_001518|GTF2I|2969|general transcription factor IIi	NM_032999|GTF2I|2969|general transcription factor IIi	NM_033000|GTF2I|2969|general transcription factor IIi	NM_033001|GTF2I|2969|general transcription factor IIi
hg19_v1_chr2_+_196521851_196521965	0.0640118	SOX2.p2	NM_020342|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AK294771|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AB033091|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AK291241|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	BC101516|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	BC112223|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	BC010371|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AL050294|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10
hg19_v1_chr1_+_92495484_92495636	0.0639458	SOX2.p2	NM_173567|EPHX4|253152|epoxide hydrolase 4	BC041475|EPHX4|253152|epoxide hydrolase 4	AK074822|EPHX4|253152|epoxide hydrolase 4
hg19_v1_chr12_+_60083125_60083154	0.0636783	SOX2.p2	BC030693|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	NM_004731|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	AK301725|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	AK310281|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	AK313345|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	AF058056|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)
hg19_v1_chr4_+_71859391_71859552	0.0636304	SOX2.p2	M60527|DCK|1633|deoxycytidine kinase	BC114617|DCK|1633|deoxycytidine kinase	JF806429|DCK|1633|deoxycytidine kinase	BT019941|DCK|1633|deoxycytidine kinase	BT019942|DCK|1633|deoxycytidine kinase	CR536527|DCK|1633|deoxycytidine kinase	CR541876|DCK|1633|deoxycytidine kinase
hg19_v1_chr5_+_96212167_96212209	0.0636126	SOX2.p2	AK312864|ERAP2|64167|endoplasmic reticulum aminopeptidase 2	AB109031|ERAP2|64167|endoplasmic reticulum aminopeptidase 2	AB163917|ERAP2|64167|endoplasmic reticulum aminopeptidase 2	BC065240|ERAP2|64167|endoplasmic reticulum aminopeptidase 2
hg19_v1_chr1_+_10490429_10490557	0.0634846	SOX2.p2	AF516753|APITD1-CORT|100526739|APITD1-CORT readthrough	BC029430|APITD1|378708|apoptosis-inducing, TAF9-like domain 1
hg19_v1_chr2_+_70314696_70314711	0.0634703	SOX2.p2	U24223|PCBP1|5093|poly(rC) binding protein 1
hg19_v1_chr17_-_67138013_67138137	0.0634173	SOX2.p2	BC125231|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	BC125232|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	AY028898|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	NM_080284|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	BC070125|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	AK308431|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	BC029852|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6
hg19_v1_chr1_+_47799622_47799660	0.0633503	SOX2.p2	AF259961|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic
hg19_v1_chr6_-_75915566_75915745	0.0632751	SOX2.p2	BC146868|COL12A1|1303|collagen, type XII, alpha 1	U73778|COL12A1|1303|collagen, type XII, alpha 1	NM_004370|COL12A1|1303|collagen, type XII, alpha 1	NM_080645|COL12A1|1303|collagen, type XII, alpha 1
hg19_v1_chr17_+_4613780_4613928	0.0632729	SOX2.p2	NM_004313|ARRB2|409|arrestin, beta 2	NM_199004|ARRB2|409|arrestin, beta 2	AK297059|ARRB2|409|arrestin, beta 2	AK097542|ARRB2|409|arrestin, beta 2
hg19_v1_chr19_+_18530087_18530167	0.0632204	SOX2.p2	NM_001009998|SSBP4|170463|single stranded DNA binding protein 4	NM_032627|SSBP4|170463|single stranded DNA binding protein 4
hg19_v1_chr7_+_26191732_26192135	0.0630931	SOX2.p2	NM_004289|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3	BC068455|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3	AF133059|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3	AF134891|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3
hg19_v1_chr7_+_2598712_2598782	0.0629849	SOX2.p2	AK092404|IQCE|23288|IQ motif containing E	BC061518|IQCE|23288|IQ motif containing E	AL136792|IQCE|23288|IQ motif containing E	AK293372|IQCE|23288|IQ motif containing E
hg19_v1_chr13_-_53024730_53024805	0.0629593	SOX2.p2	AF151903|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	BC050439|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	BC037279|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	AK289740|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	NM_016075|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)
hg19_v1_chr6_-_75915753_75915808	0.0629559	SOX2.p2	AK307558|COL12A1|1303|collagen, type XII, alpha 1
hg19_v1_chr14_+_20923289_20923325	0.0628449	SOX2.p2	NM_001244249|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	NM_001641|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	NM_080648|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	NM_080649|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1
hg19_v1_chr13_+_32605436_32605446	0.0628427	SOX2.p2	AL049784|FRY|10129|furry homolog (Drosophila)	NM_023037|FRY|10129|furry homolog (Drosophila)	U50534|FRY|10129|furry homolog (Drosophila)
hg19_v1_chr20_+_2844688_2844879	0.0627357	SOX2.p2	BC126431|VPS16|64601|vacuolar protein sorting 16 homolog (S. cerevisiae)	M34668|PTPRA|5786|protein tyrosine phosphatase, receptor type, A	NM_002836|PTPRA|5786|protein tyrosine phosphatase, receptor type, A	BC064406|VPS16|64601|vacuolar protein sorting 16 homolog (S. cerevisiae)
hg19_v1_chr11_-_102323353_102323874	0.06267	SOX2.p2	DQ891654|TMEM123|114908|transmembrane protein 123	DQ894842|TMEM123|114908|transmembrane protein 123	AY358696|TMEM123|114908|transmembrane protein 123	BC032296|TMEM123|114908|transmembrane protein 123	AY157580|TMEM123|114908|transmembrane protein 123	AK075420|TMEM123|114908|transmembrane protein 123	AY008283|TMEM123|114908|transmembrane protein 123	AK225790|TMEM123|114908|transmembrane protein 123	NM_052932|TMEM123|114908|transmembrane protein 123
hg19_v1_chr15_-_65282093_65282176	0.062597	SOX2.p2	AK172849|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	AK225527|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	AK312943|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	BC000244|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg19_v1_chrX_+_70503041_70503041	0.0625549	SOX2.p2	NM_001145408|NONO|4841|non-POU domain containing, octamer-binding	NM_001145409|NONO|4841|non-POU domain containing, octamer-binding	NM_001145410|NONO|4841|non-POU domain containing, octamer-binding	NM_007363|NONO|4841|non-POU domain containing, octamer-binding
hg19_v1_chr12_-_56360457_56360495	0.0624687	SOX2.p2	AK092881|PMEL|6490|premelanosome protein	AK130180|PMEL|6490|premelanosome protein	NM_006928|PMEL|6490|premelanosome protein
hg19_v1_chrX_+_56589961_56590141	0.0623696	SOX2.p2	NM_013444|UBQLN2|29978|ubiquilin 2	BC069237|UBQLN2|29978|ubiquilin 2	AK297252|UBQLN2|29978|ubiquilin 2	AK302885|UBQLN2|29978|ubiquilin 2	AF189009|UBQLN2|29978|ubiquilin 2
hg19_v1_chr3_-_64672285_64672305	0.0623496	SOX2.p2	AB037733|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9
hg19_v1_chr2_+_70314714_70314723	0.0623285	SOX2.p2	AK314225|PCBP1|5093|poly(rC) binding protein 1
hg19_v1_chr3_+_46283871_46283962	0.0623152	SOX2.p2	NM_001164680|CCR3|1232|chemokine (C-C motif) receptor 3	NM_001837|CCR3|1232|chemokine (C-C motif) receptor 3	NM_178328|CCR3|1232|chemokine (C-C motif) receptor 3	NM_178329|CCR3|1232|chemokine (C-C motif) receptor 3	AF262300|CCR3|1232|chemokine (C-C motif) receptor 3	AF262299|CCR3|1232|chemokine (C-C motif) receptor 3	AF224495|CCR3|1232|chemokine (C-C motif) receptor 3	AF262301|CCR3|1232|chemokine (C-C motif) receptor 3	AF262302|CCR3|1232|chemokine (C-C motif) receptor 3	AF262303|CCR3|1232|chemokine (C-C motif) receptor 3	AF262304|CCR3|1232|chemokine (C-C motif) receptor 3	BC130318|CCR3|1232|chemokine (C-C motif) receptor 3	BC130320|CCR3|1232|chemokine (C-C motif) receptor 3	BC110297|CCR3|1232|chemokine (C-C motif) receptor 3
hg19_v1_chr12_+_49297892_49297953	0.0622392	SOX2.p2	NM_033124|CCDC65|85478|coiled-coil domain containing 65	AK302082|CCDC65|85478|coiled-coil domain containing 65	AK093051|CCDC65|85478|coiled-coil domain containing 65	AF382188|CCDC65|85478|coiled-coil domain containing 65	AK314623|CCDC65|85478|coiled-coil domain containing 65	BC039317|CCDC65|85478|coiled-coil domain containing 65
hg19_v1_chr7_+_100209941_100210203	0.0622323	SOX2.p2	NM_001040098|MOSPD3|64598|motile sperm domain containing 3	NM_001040099|MOSPD3|64598|motile sperm domain containing 3	NM_023948|MOSPD3|64598|motile sperm domain containing 3	BC011653|MOSPD3|64598|motile sperm domain containing 3	BC009482|MOSPD3|64598|motile sperm domain containing 3	BC028475|MOSPD3|64598|motile sperm domain containing 3	BC005042|MOSPD3|64598|motile sperm domain containing 3
hg19_v1_chr6_+_34204690_34204721	0.0622034	SOX2.p2	BC063434|HMGA1|3159|high mobility group AT-hook 1	BC004924|HMGA1|3159|high mobility group AT-hook 1	BC008832|HMGA1|3159|high mobility group AT-hook 1	BC008963|HMGA1|3159|high mobility group AT-hook 1	BC071864|HMGA1|3159|high mobility group AT-hook 1	BC071863|HMGA1|3159|high mobility group AT-hook 1	BC067083|HMGA1|3159|high mobility group AT-hook 1
hg19_v1_chr15_-_93277303_93277475	0.0621654	SOX2.p2	BC110328|FAM174B|400451|family with sequence similarity 174, member B
hg19_v1_chr14_-_31926597_31926753	0.0621404	SOX2.p2	BC010618|C14orf126|112487|chromosome 14 open reading frame 126	AK055367|C14orf126|112487|chromosome 14 open reading frame 126	NM_080664|C14orf126|112487|chromosome 14 open reading frame 126
hg19_v1_chrX_-_16730669_16731058	0.0621291	SOX2.p2	NM_175859|CTPS2|56474|CTP synthase II	BC034986|CTPS2|56474|CTP synthase II	AK125348|CTPS2|56474|CTP synthase II	AF226667|CTPS2|56474|CTP synthase II	AK024070|CTPS2|56474|CTP synthase II	AK023549|CTPS2|56474|CTP synthase II	NM_019857|CTPS2|56474|CTP synthase II
hg19_v1_chr16_+_69458562_69458566	0.0619444	SOX2.p2	BC004373|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	AK291576|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)
hg19_v1_chr15_-_90455918_90456292	0.0618392	SOX2.p2	AK093274|C15orf38|348110|chromosome 15 open reading frame 38	AK000495|C15orf38-AP3S2|100526783|C15orf38-AP3S2 readthrough	BC053602|C15orf38|348110|chromosome 15 open reading frame 38	NM_001199058|C15orf38-AP3S2|100526783|C15orf38-AP3S2 readthrough	NM_182616|C15orf38|348110|chromosome 15 open reading frame 38
hg19_v1_chr2_-_208489972_208490006	0.0617216	SOX2.p2	NM_001127395|METTL21A|151194|methyltransferase like 21A
hg19_v1_chr8_+_62200524_62200577	0.0616729	SOX2.p2	NM_173519|CLVS1|157807|clavesin 1	AF445194|CLVS1|157807|clavesin 1	BC048992|CLVS1|157807|clavesin 1	AK091641|CLVS1|157807|clavesin 1	BC042617|CLVS1|157807|clavesin 1	AY094971|CLVS1|157807|clavesin 1	AK313040|CLVS1|157807|clavesin 1
hg19_v1_chr13_+_76210449_76210492	0.0614827	SOX2.p2	AK092052|LMO7|4008|LIM domain 7
hg19_v1_chr5_-_137090033_137090036	0.0614587	SOX2.p2	BC018800|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0
hg19_v1_chr1_+_40840304_40840348	0.061361	SOX2.p2	NM_001198978|SMAP2|64744|small ArfGAP2	AK303975|SMAP2|64744|small ArfGAP2	AL133206|SMAP2|64744|small ArfGAP2
hg19_v1_chr11_-_5706186_5706341	0.0613607	SOX2.p2	BC021258|TRIM5|85363|tripartite motif containing 5	BX647152|TRIM5|85363|tripartite motif containing 5	AK027593|TRIM5|85363|tripartite motif containing 5	NM_033034|TRIM5|85363|tripartite motif containing 5	NM_033092|TRIM5|85363|tripartite motif containing 5	NM_033093|TRIM5|85363|tripartite motif containing 5
hg19_v1_chr5_-_88178964_88179049	0.0613417	SOX2.p2	AK312472|MEF2C|4208|myocyte enhancer factor 2C	L08895|MEF2C|4208|myocyte enhancer factor 2C	AK307883|MEF2C|4208|myocyte enhancer factor 2C	BC026341|MEF2C|4208|myocyte enhancer factor 2C
hg19_v1_chr7_-_104909442_104909525	0.0612988	SOX2.p2	BC035214|SRPK2|6733|SRSF protein kinase 2	U88666|SRPK2|6733|SRSF protein kinase 2	NM_182691|SRPK2|6733|SRSF protein kinase 2
hg19_v1_chr5_+_140771482_140771482	0.0612353	SOX2.p2	NM_014004|PCDHGA8|9708|protocadherin gamma subfamily A, 8	NM_032088|PCDHGA8|9708|protocadherin gamma subfamily A, 8
hg19_v1_chr18_+_20715726_20715726	0.0611574	SOX2.p2	EF028204|CABLES1|91768|Cdk5 and Abl enzyme substrate 1	NM_001100619|CABLES1|91768|Cdk5 and Abl enzyme substrate 1
hg19_v1_chr17_-_27278324_27278336	0.0611249	SOX2.p2	BC110882|PHF12|57649|PHD finger protein 12
hg19_v1_chr3_+_10068139_10068182	0.0610754	SOX2.p2	BC013582|FANCD2|2177|Fanconi anemia, complementation group D2	BC038666|FANCD2|2177|Fanconi anemia, complementation group D2
hg19_v1_chr8_+_26240522_26240646	0.0610561	SOX2.p2	NM_004331|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF452712|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK300286|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AL132665|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BC009603|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF067396|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF079221|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF060922|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK307195|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK300727|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF536326|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AB004788|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK290213|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BC001559|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BT019500|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BT019501|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	CR456701|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	EU831983|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	EU832076|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like
hg19_v1_chr3_-_112359565_112359589	0.0608003	SOX2.p2	AB052098|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr6_-_66417069_66417117	0.0607693	SOX2.p2	FM209056|EYS|346007|eyes shut homolog (Drosophila)	AB593112|EYS|346007|eyes shut homolog (Drosophila)	AB593114|EYS|346007|eyes shut homolog (Drosophila)	BX647741|EYS|346007|eyes shut homolog (Drosophila)	BX537914|EYS|346007|eyes shut homolog (Drosophila)	FJ416331|EYS|346007|eyes shut homolog (Drosophila)	NM_001142800|EYS|346007|eyes shut homolog (Drosophila)	NM_001142801|EYS|346007|eyes shut homolog (Drosophila)
hg19_v1_chr12_-_110939877_110939944	0.0607446	SOX2.p2	BC015095|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF201946|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF175264|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC000880|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF168716|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF193795|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AK129767|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC017964|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AB578891|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AB618733|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AL136614|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC095446|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	NM_016226|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	NM_057180|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC032462|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AB578892|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)
hg19_v1_chr1_+_28844647_28844759	0.0606308	SOX2.p2	X12654|RCC1|1104|regulator of chromosome condensation 1	NM_001048194|RCC1|1104|regulator of chromosome condensation 1	NM_001048195|RCC1|1104|regulator of chromosome condensation 1	NM_001269|RCC1|1104|regulator of chromosome condensation 1
hg19_v1_chr11_-_2162340_2162583	0.0606277	SOX2.p2	NM_001127598|IGF2|3481|insulin-like growth factor 2 (somatomedin A)
hg19_v1_chr3_-_127541160_127541700	0.0606161	SOX2.p2	CR456835|MGLL|11343|monoglyceride lipase	AK304844|MGLL|11343|monoglyceride lipase	BC000551|MGLL|11343|monoglyceride lipase	U67963|MGLL|11343|monoglyceride lipase	AK315529|MGLL|11343|monoglyceride lipase	BC006230|MGLL|11343|monoglyceride lipase	NM_007283|MGLL|11343|monoglyceride lipase
hg19_v1_chr2_-_136288768_136288805	0.060577	SOX2.p2	AK095362|ZRANB3|84083|zinc finger, RAN-binding domain containing 3	BC089429|ZRANB3|84083|zinc finger, RAN-binding domain containing 3	NM_032143|ZRANB3|84083|zinc finger, RAN-binding domain containing 3
hg19_v1_chrX_+_10124984_10125125	0.0605284	SOX2.p2	NM_001830|CLCN4|1183|chloride channel 4	AK225287|CLCN4|1183|chloride channel 4	X77197|CLCN4|1183|chloride channel 4	AK289564|CLCN4|1183|chloride channel 4	BC130278|CLCN4|1183|chloride channel 4
hg19_v1_chr11_+_10879763_10879809	0.060519	SOX2.p2	BC014360|LOC729013|729013|uncharacterized LOC729013	BC036635|LOC729013|729013|uncharacterized LOC729013
hg19_v1_chrX_+_133507299_133507455	0.0604317	SOX2.p2	AY157622|PHF6|84295|PHD finger protein 6	NM_001015877|PHF6|84295|PHD finger protein 6	NM_032335|PHF6|84295|PHD finger protein 6	NM_032458|PHF6|84295|PHD finger protein 6	AL832725|PHF6|84295|PHD finger protein 6	AK290095|PHF6|84295|PHD finger protein 6	AK303369|PHF6|84295|PHD finger protein 6	BC005994|PHF6|84295|PHD finger protein 6	AB058726|PHF6|84295|PHD finger protein 6
hg19_v1_chr7_-_27205148_27205160	0.060292	SOX2.p2	NM_152739|HOXA9|3205|homeobox A9
hg19_v1_chr10_-_49482912_49482940	0.0600538	SOX2.p2	CR749241|FRMPD2|143162|FERM and PDZ domain containing 2	NM_001018071|FRMPD2|143162|FERM and PDZ domain containing 2
hg19_v1_chr22_+_26825220_26825428	0.0599351	SOX2.p2	NM_020437|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2	BC036753|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2	AK315112|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2
hg19_v1_chr6_-_42714547_42714557	0.0598654	SOX2.p2	BC017479|TBCC|6903|tubulin folding cofactor C
hg19_v1_chr2_-_85788644_85788666	0.0597835	SOX2.p2	NM_000821|GGCX|2677|gamma-glutamyl carboxylase	NM_001142269|GGCX|2677|gamma-glutamyl carboxylase
hg19_v1_chr1_-_20126368_20126452	0.0597208	SOX2.p2	BX640987|TMCO4|255104|transmembrane and coiled-coil domains 4	NM_181719|TMCO4|255104|transmembrane and coiled-coil domains 4
hg19_v1_chr22_+_17640241_17640288	0.0596384	SOX2.p2	AF307448|CECR5-AS1|100130717|CECR5 antisense RNA 1 (non-protein coding)
hg19_v1_chr4_+_175205044_175205182	0.0595884	SOX2.p2	NM_001145314|CEP44|80817|centrosomal protein 44kDa	BC038667|CEP44|80817|centrosomal protein 44kDa	AB051499|CEP44|80817|centrosomal protein 44kDa	AK094961|CEP44|80817|centrosomal protein 44kDa	AK292484|CEP44|80817|centrosomal protein 44kDa
hg19_v1_chr9_-_127905715_127905868	0.0595646	SOX2.p2	BC104030|SCAI|286205|suppressor of cancer cell invasion	BC104031|SCAI|286205|suppressor of cancer cell invasion	BC104032|SCAI|286205|suppressor of cancer cell invasion	AK098024|SCAI|286205|suppressor of cancer cell invasion	AK093983|SCAI|286205|suppressor of cancer cell invasion	NM_001144877|SCAI|286205|suppressor of cancer cell invasion	NM_173690|SCAI|286205|suppressor of cancer cell invasion
hg19_v1_chr19_-_14169970_14169970	0.0594906	SOX2.p2	NM_001145028|PALM3|342979|paralemmin 3
hg19_v1_chrX_-_154563735_154563985	0.0594697	SOX2.p2	AM393055|CLIC2|1193|chloride intracellular channel 2	AY191592|CLIC2|1193|chloride intracellular channel 2	DQ892014|CLIC2|1193|chloride intracellular channel 2	DQ895204|CLIC2|1193|chloride intracellular channel 2	BC022305|CLIC2|1193|chloride intracellular channel 2	BC005367|CLIC2|1193|chloride intracellular channel 2	AK292785|CLIC2|1193|chloride intracellular channel 2	Y12696|CLIC2|1193|chloride intracellular channel 2	NM_001289|CLIC2|1193|chloride intracellular channel 2
hg19_v1_chr4_-_111119752_111119819	0.0594321	SOX2.p2	BC001305|ELOVL6|79071|ELOVL fatty acid elongase 6	AK027031|ELOVL6|79071|ELOVL fatty acid elongase 6	NM_001130721|ELOVL6|79071|ELOVL fatty acid elongase 6	NM_024090|ELOVL6|79071|ELOVL fatty acid elongase 6
hg19_v1_chr21_-_35014013_35014159	0.059394	SOX2.p2	BC033023|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AK315707|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AF029689|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AF098798|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BC022827|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BC013155|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BX647276|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BX648547|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AK001293|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	NM_145858|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1
hg19_v1_chr3_-_48229328_48229528	0.0593406	SOX2.p2	AF277722|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	AY137580|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	EU812118|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	DQ890753|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	DQ892919|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	DQ896168|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	AK290554|CDC25A|993|cell division cycle 25 homolog A (S. pombe)
hg19_v1_chr11_+_44117746_44117772	0.0591718	SOX2.p2	NM_000401|EXT2|2132|exostosin 2	BX648142|EXT2|2132|exostosin 2
hg19_v1_chrX_+_46404927_46404962	0.0590682	SOX2.p2	BC034616|LOC401588|401588|uncharacterized LOC401588	AK056314|LOC401588|401588|uncharacterized LOC401588
hg19_v1_chr10_+_73723992_73724122	0.0589765	SOX2.p2	AB017915|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3	NM_004273|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3	AB012192|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3
hg19_v1_chr10_-_33247178_33247297	0.0589669	SOX2.p2	NM_002211|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
hg19_v1_chr21_-_40685545_40685593	0.0589407	SOX2.p2	BC064602|BRWD1|54014|bromodomain and WD repeat domain containing 1	BC142986|BRWD1|54014|bromodomain and WD repeat domain containing 1
hg19_v1_chr3_-_167191808_167191833	0.0589302	SOX2.p2	AK226025|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	AB006423|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	NM_006217|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	AK293391|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2
hg19_v1_chr5_-_179044835_179044916	0.0589173	SOX2.p2	AK298193|HNRNPH1|3187|heterogeneous nuclear ribonucleoprotein H1 (H)
hg19_v1_chr2_+_183580960_183581189	0.0587811	SOX2.p2	AL832632|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AK027647|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	NM_018981|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AY358577|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AF490904|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AK027696|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	BC070034|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	BC117299|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	BC126168|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AF038503|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10
hg19_v1_chr4_-_100212085_100212184	0.0587518	SOX2.p2	M12271|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	BC074738|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	BC117442|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	BC126306|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	AK290558|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	M12963|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	AK309597|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	NM_000667|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide
hg19_v1_chr8_+_23386386_23386443	0.0585648	SOX2.p2	BC132799|SLC25A37|51312|solute carrier family 25, member 37	BC132801|SLC25A37|51312|solute carrier family 25, member 37
hg19_v1_chr16_+_2563914_2563976	0.0585486	SOX2.p2	BC009290|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg19_v1_chr7_-_27205123_27205130	0.0584865	SOX2.p2	BC006537|HOXA9|3205|homeobox A9	BC010023|HOXA9|3205|homeobox A9
hg19_v1_chr1_-_26232890_26232992	0.0584347	SOX2.p2	BC082228|STMN1|3925|stathmin 1	AB209282|STMN1|3925|stathmin 1	X53305|STMN1|3925|stathmin 1	BX647885|STMN1|3925|stathmin 1	Z11566|STMN1|3925|stathmin 1	AK303692|STMN1|3925|stathmin 1	AK054594|STMN1|3925|stathmin 1	AK311801|STMN1|3925|stathmin 1	D28428|STMN1|3925|stathmin 1	J04991|STMN1|3925|stathmin 1	BC014353|STMN1|3925|stathmin 1	NM_001145454|STMN1|3925|stathmin 1	NM_005563|STMN1|3925|stathmin 1
hg19_v1_chr1_+_66798095_66798096	0.0583748	SOX2.p2	AK294441|PDE4B|5142|phosphodiesterase 4B, cAMP-specific
hg19_v1_chr6_-_138893666_138893750	0.0583577	SOX2.p2	NM_020464|NHSL1|57224|NHS-like 1
hg19_v1_chr2_-_75788027_75788067	0.0582809	SOX2.p2	BC016157|FAM176A|84141|family with sequence similarity 176, member A
hg19_v1_chr3_-_149095458_149095486	0.058222	SOX2.p2	AK130073|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chrX_-_53449122_53449165	0.0581828	SOX2.p2	BX640922|SMC1A|8243|structural maintenance of chromosomes 1A
hg19_v1_chr8_-_74659652_74659740	0.0581487	SOX2.p2	AK307841|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK293729|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)
hg19_v1_chr5_+_139175385_139175428	0.0580745	SOX2.p2	AL136559|PSD2|84249|pleckstrin and Sec7 domain containing 2	NM_032289|PSD2|84249|pleckstrin and Sec7 domain containing 2	BC038233|PSD2|84249|pleckstrin and Sec7 domain containing 2
hg19_v1_chr7_+_114055234_114055377	0.0579298	SOX2.p2	AF493430|FOXP2|93986|forkhead box P2	AF337817|FOXP2|93986|forkhead box P2	AF467257|FOXP2|93986|forkhead box P2	BC126104|FOXP2|93986|forkhead box P2	BC143866|FOXP2|93986|forkhead box P2	BC143867|FOXP2|93986|forkhead box P2
hg19_v1_chr1_+_52521856_52521944	0.0578948	SOX2.p2	NM_001136497|BTF3L4|91408|basic transcription factor 3-like 4	NM_001243767|BTF3L4|91408|basic transcription factor 3-like 4	NM_152265|BTF3L4|91408|basic transcription factor 3-like 4
hg19_v1_chr3_+_10068123_10068129	0.0576762	SOX2.p2	AF230336|FANCD2|2177|Fanconi anemia, complementation group D2	AF340183|FANCD2|2177|Fanconi anemia, complementation group D2
hg19_v1_chr22_+_50312278_50312330	0.057491	SOX2.p2	DQ470679|CRELD2|79174|cysteine-rich with EGF-like domains 2	NM_001135101|CRELD2|79174|cysteine-rich with EGF-like domains 2	NM_024324|CRELD2|79174|cysteine-rich with EGF-like domains 2	AK308535|CRELD2|79174|cysteine-rich with EGF-like domains 2
hg19_v1_chr8_+_64081108_64081181	0.0573778	SOX2.p2	NM_152758|YTHDF3|253943|YTH domain family, member 3	BC052970|YTHDF3|253943|YTH domain family, member 3	AK127574|YTHDF3|253943|YTH domain family, member 3	AL832005|YTHDF3|253943|YTH domain family, member 3	BX537996|YTHDF3|253943|YTH domain family, member 3
hg19_v1_chr15_+_43663350_43663552	0.0573634	SOX2.p2	AJ249677|TUBGCP4|27229|tubulin, gamma complex associated protein 4	DQ896017|TUBGCP4|27229|tubulin, gamma complex associated protein 4	EU176400|TUBGCP4|27229|tubulin, gamma complex associated protein 4
hg19_v1_chr7_-_99145988_99146121	0.0573277	SOX2.p2	HQ258461|FAM200A|221786|family with sequence similarity 200, member A	HQ258625|FAM200A|221786|family with sequence similarity 200, member A	AL713672|FAM200A|221786|family with sequence similarity 200, member A
hg19_v1_chr5_+_69321071_69321259	0.0572981	SOX2.p2	NM_021967|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_022968|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC021174|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_001178087|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	NM_022978|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	AF073519|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	AF073518|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC035932|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC093880|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC171749|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC101970|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC103687|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC104738|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC143260|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC093882|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC143255|SERF1B|728492|small EDRK-rich factor 1B (centromeric)
hg19_v1_chr11_+_33279859_33279879	0.0571673	SOX2.p2	AK293009|HIPK3|10114|homeodomain interacting protein kinase 3
hg19_v1_chr9_+_125796845_125796845	0.0571627	SOX2.p2	BC066885|GPR21|2844|G protein-coupled receptor 21	BC066886|GPR21|2844|G protein-coupled receptor 21	BC067532|GPR21|2844|G protein-coupled receptor 21	BC067533|GPR21|2844|G protein-coupled receptor 21	BC067534|GPR21|2844|G protein-coupled receptor 21	NM_005294|GPR21|2844|G protein-coupled receptor 21
hg19_v1_chr20_+_39765849_39765876	0.0570319	SOX2.p2	AB210028|PLCG1|5335|phospholipase C, gamma 1
hg19_v1_chr4_+_184580483_184580539	0.0569716	SOX2.p2	BC139745|C4orf41|60684|chromosome 4 open reading frame 41
hg19_v1_chr4_-_72649734_72650078	0.0568222	SOX2.p2	AK290827|GC|2638|group-specific component (vitamin D binding protein)	AK298433|GC|2638|group-specific component (vitamin D binding protein)	AK312971|GC|2638|group-specific component (vitamin D binding protein)	BC057228|GC|2638|group-specific component (vitamin D binding protein)	BC022310|GC|2638|group-specific component (vitamin D binding protein)	X03178|GC|2638|group-specific component (vitamin D binding protein)	AK315853|GC|2638|group-specific component (vitamin D binding protein)	NM_000583|GC|2638|group-specific component (vitamin D binding protein)
hg19_v1_chr10_+_121578768_121578785	0.056703	SOX2.p2	NM_001243194|INPP5F|22876|inositol polyphosphate-5-phosphatase F	AK123633|INPP5F|22876|inositol polyphosphate-5-phosphatase F
hg19_v1_chr1_-_154842725_154842767	0.0566611	SOX2.p2	AF031815|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	Y08263|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	AJ251016|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	AK310077|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	NM_001204087|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	NM_002249|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
hg19_v1_chr8_-_17942304_17942352	0.056626	SOX2.p2	AY305384|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1
hg19_v1_chr19_-_6459735_6459875	0.0563366	SOX2.p2	AJ619962|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	AJ512835|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	AJ619988|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	AY750170|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	BC001656|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	NM_024103|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
hg19_v1_chr2_-_233415206_233415265	0.0562582	SOX2.p2	AK056329|TIGD1|200765|tigger transposable element derived 1	NM_145702|TIGD1|200765|tigger transposable element derived 1	BC063500|TIGD1|200765|tigger transposable element derived 1
hg19_v1_chrX_+_48367346_48367476	0.0562043	SOX2.p2	NM_022825|PORCN|64840|porcupine homolog (Drosophila)	NM_203473|PORCN|64840|porcupine homolog (Drosophila)	AK293347|PORCN|64840|porcupine homolog (Drosophila)	AK056340|PORCN|64840|porcupine homolog (Drosophila)	BC019080|PORCN|64840|porcupine homolog (Drosophila)	AK057727|PORCN|64840|porcupine homolog (Drosophila)	AK314745|PORCN|64840|porcupine homolog (Drosophila)
hg19_v1_chr2_+_201676774_201677130	0.0561973	SOX2.p2	AK301511|BZW1|9689|basic leucine zipper and W2 domains 1	NM_001207069|BZW1|9689|basic leucine zipper and W2 domains 1	NM_001207068|BZW1|9689|basic leucine zipper and W2 domains 1	AK297227|BZW1|9689|basic leucine zipper and W2 domains 1
hg19_v1_chr10_+_92980507_92980561	0.0560031	SOX2.p2	AL832496|PCGF5|84333|polycomb group ring finger 5
hg19_v1_chr3_-_124842442_124842468	0.055994	SOX2.p2	BC063528|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8
hg19_v1_chr7_+_99070515_99070685	0.0559727	SOX2.p2	BC089424|ZNF789|285989|zinc finger protein 789	BC050286|ZNF789|285989|zinc finger protein 789	BX648360|ZNF789|285989|zinc finger protein 789
hg19_v1_chr12_+_110562139_110562303	0.0559433	SOX2.p2	NM_001143779|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	NM_014055|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	NM_031473|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	AF139540|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	AF332010|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	BC005396|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	AK291043|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	BC004536|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)
hg19_v1_chr11_+_93862143_93862159	0.0559325	SOX2.p2	AK074897|PANX1|24145|pannexin 1	AF093239|PANX1|24145|pannexin 1
hg19_v1_chr17_-_79849457_79849461	0.0559222	SOX2.p2	BC052302|THOC4|10189|THO complex 4	NM_005782|THOC4|10189|THO complex 4
hg19_v1_chr2_-_96874569_96874628	0.0559166	SOX2.p2	NM_020151|STARD7|56910|StAR-related lipid transfer (START) domain containing 7
hg19_v1_chr2_+_61293038_61293118	0.055861	SOX2.p2	AL833595|KIAA1841|84542|KIAA1841	BX647395|KIAA1841|84542|KIAA1841
hg19_v1_chr1_+_25071967_25072044	0.0558525	SOX2.p2	AF109196|CLIC4|25932|chloride intracellular channel 4	AM393644|CLIC4|25932|chloride intracellular channel 4	CR533501|CLIC4|25932|chloride intracellular channel 4
hg19_v1_chr3_-_71542628_71542706	0.0558259	SOX2.p2	AF146696|FOXP1|27086|forkhead box P1	BC054505|FOXP1|27086|forkhead box P1
hg19_v1_chr8_-_30515665_30515808	0.0556976	SOX2.p2	S67861|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	X63469|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	BC030572|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	BC001775|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	NM_002095|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa
hg19_v1_chr19_-_16683188_16683205	0.055408	SOX2.p2	BC062562|SLC35E1|79939|solute carrier family 35, member E1	NM_024881|SLC35E1|79939|solute carrier family 35, member E1
hg19_v1_chr12_+_75728418_75728507	0.0554038	SOX2.p2	AY358731|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	BC014603|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	NM_152779|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	DQ894020|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	EU176187|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1
hg19_v1_chr8_+_121823538_121823544	0.0553593	SOX2.p2	
hg19_v1_chr11_+_6947591_6947693	0.0552999	SOX2.p2	AF056618|ZNF215|7762|zinc finger protein 215	NM_013250|ZNF215|7762|zinc finger protein 215	AK298365|ZNF215|7762|zinc finger protein 215
hg19_v1_chr19_-_22379752_22379752	0.0552835	SOX2.p2	NM_001001411|ZNF676|163223|zinc finger protein 676
hg19_v1_chr2_+_70314983_70315013	0.0552552	SOX2.p2	
hg19_v1_chr4_+_3294711_3294809	0.0552519	SOX2.p2	AK310999|RGS12|6002|regulator of G-protein signaling 12	BC028154|RGS12|6002|regulator of G-protein signaling 12
hg19_v1_chr9_-_132586398_132586415	0.0552232	SOX2.p2	BC000674|TOR1A|1861|torsin family 1, member A (torsin A)	AF007871|TOR1A|1861|torsin family 1, member A (torsin A)	AK056062|TOR1A|1861|torsin family 1, member A (torsin A)
hg19_v1_chr1_-_161015688_161015746	0.0551163	SOX2.p2	AK314876|USF1|7391|upstream transcription factor 1	BC035505|USF1|7391|upstream transcription factor 1
hg19_v1_chr9_-_36400817_36400977	0.055049	SOX2.p2	AK093480|RNF38|152006|ring finger protein 38	AX748155|RNF38|152006|ring finger protein 38	AF394047|RNF38|152006|ring finger protein 38	NM_194328|RNF38|152006|ring finger protein 38	NM_194332|RNF38|152006|ring finger protein 38
hg19_v1_chr1_+_43148359_43148810	0.0550343	SOX2.p2	BC013838|YBX1|4904|Y box binding protein 1
hg19_v1_chr1_+_226250407_226250412	0.0549364	SOX2.p2	AK311905|H3F3A|3020|H3 histone, family 3A	NM_002107|H3F3A|3020|H3 histone, family 3A
hg19_v1_chr7_-_105162551_105162772	0.0548203	SOX2.p2	BC011396|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	AK091283|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	NM_019042|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	AK128629|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)
hg19_v1_chr9_+_15422862_15422874	0.054817	SOX2.p2	BC121011|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	BC121012|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	U66413|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	BC108743|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	U71300|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	AK293310|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa
hg19_v1_chr12_-_39836760_39837238	0.0547832	SOX2.p2	AB051495|KIF21A|55605|kinesin family member 21A	AM177179|KIF21A|55605|kinesin family member 21A	AY368076|KIF21A|55605|kinesin family member 21A	BC136414|KIF21A|55605|kinesin family member 21A	BC041430|KIF21A|55605|kinesin family member 21A	AF155117|KIF21A|55605|kinesin family member 21A	AF450487|KIF21A|55605|kinesin family member 21A	AK000059|KIF21A|55605|kinesin family member 21A	AB290166|KIF21A|55605|kinesin family member 21A	NM_001173463|KIF21A|55605|kinesin family member 21A	NM_001173464|KIF21A|55605|kinesin family member 21A	NM_001173465|KIF21A|55605|kinesin family member 21A	NM_017641|KIF21A|55605|kinesin family member 21A
hg19_v1_chr19_+_42806249_42806283	0.0546699	SOX2.p2	BC063021|PRR19|284338|proline rich 19	AK291528|PRR19|284338|proline rich 19	NM_199285|PRR19|284338|proline rich 19
hg19_v1_chr7_+_141618616_141618675	0.0543904	SOX2.p2	BC136819|OR9A4|130075|olfactory receptor, family 9, subfamily A, member 4	BC136821|OR9A4|130075|olfactory receptor, family 9, subfamily A, member 4	NM_001001656|OR9A4|130075|olfactory receptor, family 9, subfamily A, member 4
hg19_v1_chr14_-_70826393_70826447	0.0543336	SOX2.p2	AF151037|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	AK290743|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	FJ460510|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	FJ460511|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	NM_001204090|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	NM_016468|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)
hg19_v1_chr2_+_84743576_84743578	0.0540697	SOX2.p2	AK094676|DNAH6|1768|dynein, axonemal, heavy chain 6	NM_001370|DNAH6|1768|dynein, axonemal, heavy chain 6
hg19_v1_chr11_+_73498913_73498939	0.0539744	SOX2.p2	AF161408|MRPL48|51642|mitochondrial ribosomal protein L48	AK297746|MRPL48|51642|mitochondrial ribosomal protein L48	NM_016055|MRPL48|51642|mitochondrial ribosomal protein L48	BC009764|MRPL48|51642|mitochondrial ribosomal protein L48	AK309219|MRPL48|51642|mitochondrial ribosomal protein L48	AK310005|MRPL48|51642|mitochondrial ribosomal protein L48
hg19_v1_chr17_-_655375_655465	0.053908	SOX2.p2	AF173856|GEMIN4|50628|gem (nuclear organelle) associated protein 4	BC036024|GEMIN4|50628|gem (nuclear organelle) associated protein 4	AK302722|GEMIN4|50628|gem (nuclear organelle) associated protein 4	BC032084|GEMIN4|50628|gem (nuclear organelle) associated protein 4	BC020062|GEMIN4|50628|gem (nuclear organelle) associated protein 4
hg19_v1_chr13_-_75901897_75901948	0.0538979	SOX2.p2	CR749622|TBC1D4|9882|TBC1 domain family, member 4
hg19_v1_chr2_+_113299491_113299612	0.0538497	SOX2.p2	AK128044|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa	NM_001137604|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa	NM_019014|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa	AK302814|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa
hg19_v1_chr1_+_185014651_185014698	0.053845	SOX2.p2	AK091574|RNF2|6045|ring finger protein 2	BC012583|RNF2|6045|ring finger protein 2	AK314793|RNF2|6045|ring finger protein 2
hg19_v1_chr3_+_157827849_157827933	0.053797	SOX2.p2	AK290334|RSRC1|51319|arginine/serine-rich coiled-coil 1	BC006982|RSRC1|51319|arginine/serine-rich coiled-coil 1	NM_016625|RSRC1|51319|arginine/serine-rich coiled-coil 1	AF208853|RSRC1|51319|arginine/serine-rich coiled-coil 1	BC010357|RSRC1|51319|arginine/serine-rich coiled-coil 1
hg19_v1_chr16_+_67143783_67143925	0.0537772	SOX2.p2	AF176088|C16orf70|80262|chromosome 16 open reading frame 70	BC004556|C16orf70|80262|chromosome 16 open reading frame 70	NM_025187|C16orf70|80262|chromosome 16 open reading frame 70
hg19_v1_chr14_-_70826303_70826389	0.0537256	SOX2.p2	CR457199|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	BC001702|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)
hg19_v1_chr12_+_65563339_65563370	0.0537086	SOX2.p2	AK312473|LEMD3|23592|LEM domain containing 3	NM_001167614|LEMD3|23592|LEM domain containing 3	NM_014319|LEMD3|23592|LEM domain containing 3	AK304317|LEMD3|23592|LEM domain containing 3	AF112299|LEMD3|23592|LEM domain containing 3
hg19_v1_chr19_-_19626237_19626493	0.0536759	SOX2.p2	DQ891603|TSSK6|83983|testis-specific serine kinase 6	DQ894797|TSSK6|83983|testis-specific serine kinase 6	AF329483|TSSK6|83983|testis-specific serine kinase 6	AK058166|TSSK6|83983|testis-specific serine kinase 6	AK313767|TSSK6|83983|testis-specific serine kinase 6	BC014611|TSSK6|83983|testis-specific serine kinase 6	NM_032037|TSSK6|83983|testis-specific serine kinase 6	AF348077|TSSK6|83983|testis-specific serine kinase 6
hg19_v1_chr2_-_85788550_85788633	0.0536679	SOX2.p2	DQ892948|GGCX|2677|gamma-glutamyl carboxylase	DQ896196|GGCX|2677|gamma-glutamyl carboxylase	EU847509|GGCX|2677|gamma-glutamyl carboxylase	BC013979|GGCX|2677|gamma-glutamyl carboxylase	AK310483|GGCX|2677|gamma-glutamyl carboxylase	AK297397|GGCX|2677|gamma-glutamyl carboxylase	BC004422|GGCX|2677|gamma-glutamyl carboxylase	AK222827|GGCX|2677|gamma-glutamyl carboxylase	AK225663|GGCX|2677|gamma-glutamyl carboxylase	AK298982|GGCX|2677|gamma-glutamyl carboxylase	AK313126|GGCX|2677|gamma-glutamyl carboxylase	M81592|GGCX|2677|gamma-glutamyl carboxylase
hg19_v1_chr6_+_17600504_17600695	0.0536435	SOX2.p2	NM_016255|FAM8A1|51439|family with sequence similarity 8, member A1	AK296393|FAM8A1|51439|family with sequence similarity 8, member A1	AK312814|FAM8A1|51439|family with sequence similarity 8, member A1	AF097027|FAM8A1|51439|family with sequence similarity 8, member A1	BC047881|FAM8A1|51439|family with sequence similarity 8, member A1
hg19_v1_chr3_+_45730914_45730957	0.0536187	SOX2.p2	BC016559|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	AL136831|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	AK296421|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	AM393061|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)
hg19_v1_chr13_+_58205788_58205788	0.0536156	SOX2.p2	NM_001040429|PCDH17|27253|protocadherin 17
hg19_v1_chr6_-_31782786_31782834	0.0536025	SOX2.p2	D85730|HSPA1L|3305|heat shock 70kDa protein 1-like	AK302179|HSPA1L|3305|heat shock 70kDa protein 1-like	BC034483|HSPA1L|3305|heat shock 70kDa protein 1-like	NM_005527|HSPA1L|3305|heat shock 70kDa protein 1-like
hg19_v1_chr7_+_116660291_116660440	0.053494	SOX2.p2	AY009152|ST7|7982|suppression of tumorigenicity 7	AY009153|ST7|7982|suppression of tumorigenicity 7	AK297510|ST7|7982|suppression of tumorigenicity 7
hg19_v1_chr12_-_18243052_18243113	0.0534672	SOX2.p2	AK026308|RERGL|79785|RERG/RAS-like	BC042888|RERGL|79785|RERG/RAS-like	NM_024730|RERGL|79785|RERG/RAS-like
hg19_v1_chr15_+_45879758_45879788	0.0534645	SOX2.p2	AK128626|PLDN|26258|pallidin homolog (mouse)
hg19_v1_chr1_+_43148048_43148073	0.0531937	SOX2.p2	NM_004559|YBX1|4904|Y box binding protein 1
hg19_v1_chr16_+_2563977_2563986	0.0531053	SOX2.p2	BC007389|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	BC004537|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg19_v1_chr2_-_178753464_178753465	0.0530887	SOX2.p2	AJ251509|PDE11A|50940|phosphodiesterase 11A	NM_001077196|PDE11A|50940|phosphodiesterase 11A
hg19_v1_chr8_-_18871095_18871130	0.0530617	SOX2.p2	GU727648|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg19_v1_chr1_+_52521975_52522021	0.0530512	SOX2.p2	AK027582|BTF3L4|91408|basic transcription factor 3-like 4	BC022371|BTF3L4|91408|basic transcription factor 3-like 4	BC021004|BTF3L4|91408|basic transcription factor 3-like 4
hg19_v1_chr14_-_24777064_24777149	0.0530244	SOX2.p2	
hg19_v1_chr19_+_10765106_10765230	0.0530122	SOX2.p2	AF141870|ILF3|3609|interleukin enhancer binding factor 3, 90kDa
hg19_v1_chr3_-_33700932_33701071	0.0528704	SOX2.p2	NM_001207044|CLASP2|23122|cytoplasmic linker associated protein 2
hg19_v1_chr19_-_53238290_53238306	0.0528566	SOX2.p2	BC028590|ZNF611|81856|zinc finger protein 611	AK091389|ZNF611|81856|zinc finger protein 611	NM_001161501|ZNF611|81856|zinc finger protein 611	NM_001161499|ZNF611|81856|zinc finger protein 611	NM_001161500|ZNF611|81856|zinc finger protein 611
hg19_v1_chr14_+_70078313_70078469	0.0528368	SOX2.p2	D87434|KIAA0247|9766|KIAA0247
hg19_v1_chr11_-_61584228_61584375	0.0526039	SOX2.p2	AF199596|FADS1|3992|fatty acid desaturase 1	AF226273|FADS1|3992|fatty acid desaturase 1	DQ890643|FADS1|3992|fatty acid desaturase 1	DQ893822|FADS1|3992|fatty acid desaturase 1	AK027427|FADS1|3992|fatty acid desaturase 1	BC007846|FADS1|3992|fatty acid desaturase 1	AK222906|FADS1|3992|fatty acid desaturase 1	AF084558|FADS1|3992|fatty acid desaturase 1	AL512760|FADS1|3992|fatty acid desaturase 1	AK314199|FADS1|3992|fatty acid desaturase 1	AK027522|FADS1|3992|fatty acid desaturase 1
hg19_v1_chr12_-_56709656_56709772	0.0525713	SOX2.p2	AF186113|CNPY2|10330|canopy 2 homolog (zebrafish)	AB015631|CNPY2|10330|canopy 2 homolog (zebrafish)	BC065015|CNPY2|10330|canopy 2 homolog (zebrafish)
hg19_v1_chr2_+_11295569_11295593	0.0525628	SOX2.p2	AK001091|PQLC3|130814|PQ loop repeat containing 3
hg19_v1_chr10_+_127408225_127408399	0.0525154	SOX2.p2	BX648348|C10orf137|26098|chromosome 10 open reading frame 137	AK091507|C10orf137|26098|chromosome 10 open reading frame 137
hg19_v1_chr12_+_98909331_98909404	0.0524961	SOX2.p2	NM_001032283|TMPO|7112|thymopoietin	NM_001032284|TMPO|7112|thymopoietin	NM_003276|TMPO|7112|thymopoietin	BC050383|TMPO|7112|thymopoietin	BC053675|TMPO|7112|thymopoietin
hg19_v1_chr6_-_38670920_38670921	0.0524627	SOX2.p2	AK312662|GLO1|2739|glyoxalase I
hg19_v1_chr6_-_47253962_47254003	0.0524325	SOX2.p2	BC010241|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr2_-_172750724_172750843	0.05228	SOX2.p2	DQ891540|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	EU176607|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK091071|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	BC016932|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AJ496568|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	Y14494|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK022828|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK294638|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	NM_003705|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12
hg19_v1_chr1_-_1623942_1623988	0.0522635	SOX2.p2	CR936618|SLC35E2B|728661|solute carrier family 35, member E2B	BC062371|SLC35E2|9906|solute carrier family 35, member E2
hg19_v1_chr6_-_10415217_10415334	0.0522445	SOX2.p2	FJ794945|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	M61156|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	M36711|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	X52611|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
hg19_v1_chr4_-_83931973_83932016	0.0520924	SOX2.p2	AB111889|LIN54|132660|lin-54 homolog (C. elegans)	BX640657|LIN54|132660|lin-54 homolog (C. elegans)	BX640966|LIN54|132660|lin-54 homolog (C. elegans)	NM_001115008|LIN54|132660|lin-54 homolog (C. elegans)	NM_194282|LIN54|132660|lin-54 homolog (C. elegans)
hg19_v1_chr12_+_53845911_53845945	0.0520694	SOX2.p2	BC035420|PCBP2|5094|poly(rC) binding protein 2
hg19_v1_chr7_+_129007942_129008030	0.0518503	SOX2.p2	NM_001130723|AHCYL2|23382|adenosylhomocysteinase-like 2
hg19_v1_chr17_+_80416606_80416679	0.051835	SOX2.p2	BC016440|NARF|26502|nuclear prelamin A recognition factor
hg19_v1_chr3_-_150264280_150264427	0.0518061	SOX2.p2	AK093929|SERP1|27230|stress-associated endoplasmic reticulum protein 1	AF136975|SERP1|27230|stress-associated endoplasmic reticulum protein 1	AK098135|SERP1|27230|stress-associated endoplasmic reticulum protein 1	AK090933|SERP1|27230|stress-associated endoplasmic reticulum protein 1	NM_014445|SERP1|27230|stress-associated endoplasmic reticulum protein 1
hg19_v1_chr1_-_1677430_1677493	0.0517691	SOX2.p2	AL049665|SLC35E2|9906|solute carrier family 35, member E2	NM_001199787|SLC35E2|9906|solute carrier family 35, member E2	NM_182838|SLC35E2|9906|solute carrier family 35, member E2	BC110653|SLC35E2B|728661|solute carrier family 35, member E2B
hg19_v1_chr4_-_41216455_41216683	0.0516036	SOX2.p2	BC027946|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	AK304247|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	AK226179|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	NM_001166050|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	NM_004307|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	NM_173075|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2
hg19_v1_chr3_-_192635627_192635646	0.0516027	SOX2.p2	BC013123|MB21D2|151963|Mab-21 domain containing 2	AK290447|MB21D2|151963|Mab-21 domain containing 2	BX648517|MB21D2|151963|Mab-21 domain containing 2
hg19_v1_chr12_+_20848288_20848702	0.0515859	SOX2.p2	NM_001145945|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	NM_001145946|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK308729|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK296236|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AF205076|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	NM_001145944|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	NM_017435|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK303713|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK294333|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	BC022461|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AF260704|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1
hg19_v1_chr6_+_80714389_80714409	0.051558	SOX2.p2	AK315696|TTK|7272|TTK protein kinase
hg19_v1_chr12_-_6961044_6961229	0.0513137	SOX2.p2	BC036512|CDCA3|83461|cell division cycle associated 3
hg19_v1_chr6_+_170615780_170615836	0.0512849	SOX2.p2	DQ873695|FAM120B|84498|family with sequence similarity 120B	AK056435|FAM120B|84498|family with sequence similarity 120B
hg19_v1_chr5_-_77805930_77806179	0.0512022	SOX2.p2	D86961|LHFPL2|10184|lipoma HMGIC fusion partner-like 2	BC136335|LHFPL2|10184|lipoma HMGIC fusion partner-like 2	BC136336|LHFPL2|10184|lipoma HMGIC fusion partner-like 2	AY309920|LHFPL2|10184|lipoma HMGIC fusion partner-like 2
hg19_v1_chr18_-_64271215_64271408	0.0511535	SOX2.p2	AJ007607|CDH19|28513|cadherin 19, type 2	NM_021153|CDH19|28513|cadherin 19, type 2	AK304000|CDH19|28513|cadherin 19, type 2	AK315257|CDH19|28513|cadherin 19, type 2	BC015877|CDH19|28513|cadherin 19, type 2
hg19_v1_chr4_-_24586176_24586177	0.051054	SOX2.p2	AB001636|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg19_v1_chr7_+_142960588_142960614	0.0509512	SOX2.p2	AK289570|GSTK1|373156|glutathione S-transferase kappa 1	BC063425|GSTK1|373156|glutathione S-transferase kappa 1	AM393732|GSTK1|373156|glutathione S-transferase kappa 1	BC050715|GSTK1|373156|glutathione S-transferase kappa 1	AK299968|GSTK1|373156|glutathione S-transferase kappa 1	CR533445|GSTK1|373156|glutathione S-transferase kappa 1
hg19_v1_chr1_+_43148168_43148173	0.0508783	SOX2.p2	BC015208|YBX1|4904|Y box binding protein 1
hg19_v1_chrX_-_128977719_128977938	0.0508409	SOX2.p2	AL161962|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AK096967|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AF151847|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AY358558|ZDHHC9|51114|zinc finger, DHHC-type containing 9	BC006200|ZDHHC9|51114|zinc finger, DHHC-type containing 9	BC012826|ZDHHC9|51114|zinc finger, DHHC-type containing 9	BC003128|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AK001112|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AY952881|ZDHHC9|51114|zinc finger, DHHC-type containing 9	NM_016032|ZDHHC9|51114|zinc finger, DHHC-type containing 9
hg19_v1_chr5_+_110427869_110428049	0.050798	SOX2.p2	AF385437|WDR36|134430|WD repeat domain 36	NM_139281|WDR36|134430|WD repeat domain 36	BC133025|WDR36|134430|WD repeat domain 36	BC136517|WDR36|134430|WD repeat domain 36	AK095312|WDR36|134430|WD repeat domain 36	AL832494|WDR36|134430|WD repeat domain 36
hg19_v1_chr19_+_44576266_44576354	0.0507859	SOX2.p2	AY458845|ZNF284|342909|zinc finger protein 284	NM_001037813|ZNF284|342909|zinc finger protein 284	CR936662|ZNF284|342909|zinc finger protein 284
hg19_v1_chr11_+_3829765_3829783	0.0507655	SOX2.p2	NM_014489|PGAP2|27315|post-GPI attachment to proteins 2	AF159615|PGAP2|27315|post-GPI attachment to proteins 2
hg19_v1_chr17_+_7960201_7960203	0.0507513	SOX2.p2	
hg19_v1_chr19_+_11466173_11466218	0.0506363	SOX2.p2	AK094869|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	BC009378|LPPR2|64748|lipid phosphate phosphatase-related protein type 2
hg19_v1_chr10_+_104221158_104221207	0.050619	SOX2.p2	AK301612|TMEM180|79847|transmembrane protein 180	AY358808|TMEM180|79847|transmembrane protein 180	NM_024789|TMEM180|79847|transmembrane protein 180
hg19_v1_chr8_-_81787015_81787015	0.0505879	SOX2.p2	AK131274|ZNF704|619279|zinc finger protein 704	NM_001033723|ZNF704|619279|zinc finger protein 704
hg19_v1_chr18_-_24722757_24723001	0.0505713	SOX2.p2	AF332472|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9	AK093349|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9	NM_001243848|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9
hg19_v1_chr8_-_93977715_93977816	0.050546	SOX2.p2	AK096398|C8orf83|286144|chromosome 8 open reading frame 83	NM_001191036|C8orf83|286144|chromosome 8 open reading frame 83
hg19_v1_chr13_-_45150601_45150700	0.0504833	SOX2.p2	AB082525|TSC22D1|8848|TSC22 domain family, member 1	NM_001243799|TSC22D1|8848|TSC22 domain family, member 1	NM_183422|TSC22D1|8848|TSC22 domain family, member 1
hg19_v1_chr7_-_141401889_141401980	0.0503378	SOX2.p2	AB032973|KIAA1147|57189|KIAA1147	NM_001080392|KIAA1147|57189|KIAA1147
hg19_v1_chr1_+_154193757_154193813	0.0501971	SOX2.p2	AK124294|UBAP2L|9898|ubiquitin associated protein 2-like
hg19_v1_chr7_-_100487273_100487338	0.0501669	SOX2.p2	BC017456|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)	BC067904|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)	AK292467|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)	NM_001015072|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)
hg19_v1_chr16_+_69458489_69458543	0.0501541	SOX2.p2	AB009282|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	NM_030579|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	BX647922|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	BC014431|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)
hg19_v1_chr21_-_30257611_30257715	0.050141	SOX2.p2	BC011554|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK314100|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK225515|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	AF139682|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	NM_013240|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	NM_182749|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)
hg19_v1_chr1_-_33502452_33502463	0.0501214	SOX2.p2	BC070127|AK2|204|adenylate kinase 2	BC090040|AK2|204|adenylate kinase 2	U84371|AK2|204|adenylate kinase 2	U39945|AK2|204|adenylate kinase 2	AY080899|AK2|204|adenylate kinase 2
hg19_v1_chrX_-_118726852_118727112	0.0500358	SOX2.p2	EF165090|NKRF|55922|NFKB repressing factor	EF165091|NKRF|55922|NFKB repressing factor	EF165093|NKRF|55922|NFKB repressing factor	AJ011812|NKRF|55922|NFKB repressing factor	EF158333|NKRF|55922|NFKB repressing factor	EF216688|NKRF|55922|NFKB repressing factor	EF216689|NKRF|55922|NFKB repressing factor	NM_001173488|NKRF|55922|NFKB repressing factor
hg19_v1_chr3_-_112359660_112359673	0.0497692	SOX2.p2	AK292881|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr11_-_3013577_3013622	0.0496499	SOX2.p2	NM_005969|NAP1L4|4676|nucleosome assembly protein 1-like 4	U77456|NAP1L4|4676|nucleosome assembly protein 1-like 4	AK312599|NAP1L4|4676|nucleosome assembly protein 1-like 4
hg19_v1_chr6_-_13814546_13814990	0.0496169	SOX2.p2	BC008234|CCDC90A|63933|coiled-coil domain containing 90A	BC016850|CCDC90A|63933|coiled-coil domain containing 90A	NM_001031713|CCDC90A|63933|coiled-coil domain containing 90A	AK024611|CCDC90A|63933|coiled-coil domain containing 90A
hg19_v1_chr12_-_56709777_56709824	0.0495333	SOX2.p2	BC001027|CNPY2|10330|canopy 2 homolog (zebrafish)	AK312921|CNPY2|10330|canopy 2 homolog (zebrafish)
hg19_v1_chr17_-_56429495_56429577	0.0494996	SOX2.p2	CR407663|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	EU446710|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	AK311986|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	U38817|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	BC002802|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	U38818|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	NM_003168|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	U43923|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	AK129758|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)
hg19_v1_chr17_+_79213104_79213165	0.0494995	SOX2.p2	BC127837|C17orf89|284184|chromosome 17 open reading frame 89	NM_001086521|C17orf89|284184|chromosome 17 open reading frame 89	BC079831|C17orf89|284184|chromosome 17 open reading frame 89
hg19_v1_chr1_+_28844762_28844803	0.0494614	SOX2.p2	BC069198|RCC1|1104|regulator of chromosome condensation 1
hg19_v1_chr1_-_161015752_161015783	0.0493931	SOX2.p2	NM_007122|USF1|7391|upstream transcription factor 1	NM_207005|USF1|7391|upstream transcription factor 1
hg19_v1_chr6_+_43597278_43597278	0.0493564	SOX2.p2	NM_001003690|MAD2L1BP|9587|MAD2L1 binding protein
hg19_v1_chr11_-_61735067_61735107	0.049291	SOX2.p2	BC020300|FTH1|2495|ferritin, heavy polypeptide 1	BC015946|FTH1|2495|ferritin, heavy polypeptide 1	BC063514|FTH1|2495|ferritin, heavy polypeptide 1	BC011359|FTH1|2495|ferritin, heavy polypeptide 1	BC070494|FTH1|2495|ferritin, heavy polypeptide 1	AB062402|FTH1|2495|ferritin, heavy polypeptide 1	BC013724|FTH1|2495|ferritin, heavy polypeptide 1	BC073750|FTH1|2495|ferritin, heavy polypeptide 1	BC000857|FTH1|2495|ferritin, heavy polypeptide 1	BC035441|FTH1|2495|ferritin, heavy polypeptide 1	AK307190|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa	AK311818|FTH1|2495|ferritin, heavy polypeptide 1	BC016009|FTH1|2495|ferritin, heavy polypeptide 1	BC066341|FTH1|2495|ferritin, heavy polypeptide 1	BC066961|FTH1|2495|ferritin, heavy polypeptide 1	BC104643|FTH1|2495|ferritin, heavy polypeptide 1	BC105802|FTH1|2495|ferritin, heavy polypeptide 1	L20941|FTH1|2495|ferritin, heavy polypeptide 1	D28463|FTH1|2495|ferritin, heavy polypeptide 1
hg19_v1_chr1_+_25071906_25071960	0.0492476	SOX2.p2	AK315051|CLIC4|25932|chloride intracellular channel 4	AK301466|CLIC4|25932|chloride intracellular channel 4	AK307142|CLIC4|25932|chloride intracellular channel 4
hg19_v1_chr17_-_79849362_79849455	0.0492288	SOX2.p2	AF047002|THOC4|10189|THO complex 4	EU831428|THOC4|10189|THO complex 4	EU831521|THOC4|10189|THO complex 4
hg19_v1_chr17_+_7591666_7591804	0.0489125	SOX2.p2	AY766323|WRAP53|55135|WD repeat containing, antisense to TP53	DQ431240|WRAP53|55135|WD repeat containing, antisense to TP53	NM_001143992|WRAP53|55135|WD repeat containing, antisense to TP53	NM_018081|WRAP53|55135|WD repeat containing, antisense to TP53	AK001247|WRAP53|55135|WD repeat containing, antisense to TP53	AK225273|WRAP53|55135|WD repeat containing, antisense to TP53	AK225411|WRAP53|55135|WD repeat containing, antisense to TP53	AK303246|WRAP53|55135|WD repeat containing, antisense to TP53	BC002336|WRAP53|55135|WD repeat containing, antisense to TP53
hg19_v1_chr22_-_39052579_39052633	0.0488806	SOX2.p2	NM_001013647|LOC646851|646851|putative uncharacterized protein LOC388900
hg19_v1_chr6_-_130544098_130544098	0.0487267	SOX2.p2	AK091882|SAMD3|154075|sterile alpha motif domain containing 3	NM_001017373|SAMD3|154075|sterile alpha motif domain containing 3
hg19_v1_chr7_-_130353579_130353611	0.048582	SOX2.p2	AK291409|COPG2|26958|coatomer protein complex, subunit gamma 2	NM_012133|COPG2|26958|coatomer protein complex, subunit gamma 2
hg19_v1_chrX_-_2882288_2882493	0.048459	SOX2.p2	BC130438|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	AK223199|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	X83573|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	AK313093|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	AK301004|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	AK223183|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)	NM_000047|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)
hg19_v1_chr7_-_83270746_83270746	0.0484204	SOX2.p2	AK303925|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	NM_001178129|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E
hg19_v1_chr19_+_10764896_10764985	0.0484041	SOX2.p2	NM_001137673|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	NM_004516|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	NM_012218|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	NM_017620|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	NM_153464|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	AB209062|ILF3|3609|interleukin enhancer binding factor 3, 90kDa
hg19_v1_chr4_-_83294806_83294938	0.048369	SOX2.p2	AF039575|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	X03910|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	DQ892240|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	DQ895440|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	BC002401|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)
hg19_v1_chr17_+_11924116_11924247	0.0483493	SOX2.p2	BC036032|MAP2K4|6416|mitogen-activated protein kinase kinase 4	NM_003010|MAP2K4|6416|mitogen-activated protein kinase kinase 4	BC060764|MAP2K4|6416|mitogen-activated protein kinase kinase 4	AK131544|MAP2K4|6416|mitogen-activated protein kinase kinase 4	AK313053|MAP2K4|6416|mitogen-activated protein kinase kinase 4	U17743|MAP2K4|6416|mitogen-activated protein kinase kinase 4	AK294923|MAP2K4|6416|mitogen-activated protein kinase kinase 4	L36870|MAP2K4|6416|mitogen-activated protein kinase kinase 4	BC050386|MAP2K4|6416|mitogen-activated protein kinase kinase 4	BT019676|MAP2K4|6416|mitogen-activated protein kinase kinase 4	CR536564|MAP2K4|6416|mitogen-activated protein kinase kinase 4
hg19_v1_chr3_+_184038050_184038206	0.0483456	SOX2.p2	D12686|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	NM_004953|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg19_v1_chr4_-_111563278_111563278	0.0483243	SOX2.p2	NM_001204397|PITX2|5308|paired-like homeodomain 2	NM_001204398|PITX2|5308|paired-like homeodomain 2	NM_001204399|PITX2|5308|paired-like homeodomain 2	NM_153426|PITX2|5308|paired-like homeodomain 2	NM_153427|PITX2|5308|paired-like homeodomain 2
hg19_v1_chr9_-_15510899_15511022	0.0482527	SOX2.p2	BC040032|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC013160|PSIP1|11168|PC4 and SFRS1 interacting protein 1	AF432220|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC064135|PSIP1|11168|PC4 and SFRS1 interacting protein 1	AF063020|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC022971|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC033817|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC044568|PSIP1|11168|PC4 and SFRS1 interacting protein 1	NM_001128217|PSIP1|11168|PC4 and SFRS1 interacting protein 1	NM_033222|PSIP1|11168|PC4 and SFRS1 interacting protein 1
hg19_v1_chr1_+_32479401_32479596	0.0482402	SOX2.p2	AK293369|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	AK091346|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	AK312916|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	AK303218|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	BC000717|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	BC019109|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	M88108|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	NM_006559|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	BC010132|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	DQ895323|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	U78971|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1
hg19_v1_chr8_+_126010719_126010747	0.0482287	SOX2.p2	NM_003129|SQLE|6713|squalene epoxidase	AK301792|SQLE|6713|squalene epoxidase	BX647605|SQLE|6713|squalene epoxidase
hg19_v1_chr1_-_230991781_230991781	0.0482041	SOX2.p2	AK292433|C1orf198|84886|chromosome 1 open reading frame 198	NM_001136495|C1orf198|84886|chromosome 1 open reading frame 198
hg19_v1_chr19_+_52074530_52074564	0.0481538	SOX2.p2	NM_007147|ZNF175|7728|zinc finger protein 175	BC007778|ZNF175|7728|zinc finger protein 175	AK292687|ZNF175|7728|zinc finger protein 175	BC052997|ZNF175|7728|zinc finger protein 175	D50419|ZNF175|7728|zinc finger protein 175
hg19_v1_chr2_+_135596185_135596252	0.0480769	SOX2.p2	AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase	NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase	BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase	BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase	AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase
hg19_v1_chr11_+_57529233_57529445	0.0480331	SOX2.p2	NM_001085458|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085459|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085460|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085461|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085462|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085463|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085464|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085465|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085466|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085467|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085468|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085469|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206883|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206884|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206885|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206886|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206887|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206888|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206889|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206890|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001206891|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001331|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062317|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062318|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062319|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062320|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062321|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062322|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062323|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062324|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062325|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062326|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062327|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062328|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062329|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062330|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062331|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062332|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062333|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062334|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062335|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062336|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062337|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062338|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062339|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062340|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062341|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062342|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062343|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062344|CTNND1|1500|catenin (cadherin-associated protein), delta 1	BC075795|CTNND1|1500|catenin (cadherin-associated protein), delta 1
hg19_v1_chr19_-_38720312_38720320	0.0479832	SOX2.p2	BC021191|DPF1|8193|D4, zinc and double PHD fingers family 1	NM_001135156|DPF1|8193|D4, zinc and double PHD fingers family 1
hg19_v1_chr15_-_43662107_43662259	0.0479214	SOX2.p2	AF525399|ZSCAN29|146050|zinc finger and SCAN domain containing 29	BC109270|ZSCAN29|146050|zinc finger and SCAN domain containing 29	BC109271|ZSCAN29|146050|zinc finger and SCAN domain containing 29	AK122788|ZSCAN29|146050|zinc finger and SCAN domain containing 29	NM_152455|ZSCAN29|146050|zinc finger and SCAN domain containing 29	BC043612|ZSCAN29|146050|zinc finger and SCAN domain containing 29
hg19_v1_chr7_-_95225802_95225924	0.0478503	SOX2.p2	BC040239|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4	AK223328|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4	U54617|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4	AK096428|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4	AK312424|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4	NM_002612|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4
hg19_v1_chr6_+_160183510_160183544	0.047752	SOX2.p2	AK294273|ACAT2|39|acetyl-CoA acetyltransferase 2
hg19_v1_chr6_+_142468415_142468430	0.0477343	SOX2.p2	BC005937|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AF141341|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	CR457207|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	DQ893520|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	DQ896504|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AJ420507|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)
hg19_v1_chr17_+_80416530_80416597	0.0477283	SOX2.p2	AK297875|NARF|26502|nuclear prelamin A recognition factor	NM_001083608|NARF|26502|nuclear prelamin A recognition factor	NM_012336|NARF|26502|nuclear prelamin A recognition factor	NM_031968|NARF|26502|nuclear prelamin A recognition factor	BC000438|NARF|26502|nuclear prelamin A recognition factor	AK000929|NARF|26502|nuclear prelamin A recognition factor	AK303155|NARF|26502|nuclear prelamin A recognition factor	AF128406|NARF|26502|nuclear prelamin A recognition factor
hg19_v1_chr2_-_132121730_132121730	0.0476953	SOX2.p2	NM_001077637|WTH3DI|150786|RAB6C-like
hg19_v1_chr16_+_81069316_81069710	0.0476141	SOX2.p2	NM_015251|ATMIN|23300|ATM interactor	BC002701|ATMIN|23300|ATM interactor	AK290943|ATMIN|23300|ATM interactor
hg19_v1_chr2_+_8822112_8822294	0.0476099	SOX2.p2	NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein
hg19_v1_chr5_-_146833150_146833380	0.0474061	SOX2.p2	EU832180|DPYSL3|1809|dihydropyrimidinase-like 3	EU832273|DPYSL3|1809|dihydropyrimidinase-like 3	BC039006|DPYSL3|1809|dihydropyrimidinase-like 3	D78014|DPYSL3|1809|dihydropyrimidinase-like 3	AK297223|DPYSL3|1809|dihydropyrimidinase-like 3	NM_001387|DPYSL3|1809|dihydropyrimidinase-like 3	Y07818|DPYSL3|1809|dihydropyrimidinase-like 3
hg19_v1_chr3_-_71592707_71592707	0.0473779	SOX2.p2	AF250920|FOXP1|27086|forkhead box P1	NM_001244816|FOXP1|27086|forkhead box P1
hg19_v1_chr7_+_23286386_23286387	0.0472781	SOX2.p2	AK297055|GPNMB|10457|glycoprotein (transmembrane) nmb	AK303071|GPNMB|10457|glycoprotein (transmembrane) nmb	AK312279|GPNMB|10457|glycoprotein (transmembrane) nmb
hg19_v1_chr18_+_21719447_21719450	0.047174	SOX2.p2	NM_138644|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated	AF295037|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated
hg19_v1_chr2_-_3605849_3605909	0.0470511	SOX2.p2	AJ224117|RNASEH1|246243|ribonuclease H1	BT019670|RNASEH1|246243|ribonuclease H1	CR541820|RNASEH1|246243|ribonuclease H1	DQ892597|RNASEH1|246243|ribonuclease H1	DQ895824|RNASEH1|246243|ribonuclease H1	AF048994|RNASEH1|246243|ribonuclease H1	AK096913|RNASEH1|246243|ribonuclease H1	AF048995|RNASEH1|246243|ribonuclease H1	AK075490|RNASEH1|246243|ribonuclease H1
hg19_v1_chr4_-_83295037_83295123	0.0470482	SOX2.p2	D55674|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	AK057836|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	D55672|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	BC023977|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	BC026015|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)
hg19_v1_chr2_-_20550357_20550481	0.0470228	SOX2.p2	AK304198|PUM2|23369|pumilio homolog 2 (Drosophila)	AK093847|PUM2|23369|pumilio homolog 2 (Drosophila)
hg19_v1_chr15_-_31283617_31283918	0.046921	SOX2.p2	AK000320|MTMR10|54893|myotubularin related protein 10	AM392869|MTMR10|54893|myotubularin related protein 10	BC094750|MTMR10|54893|myotubularin related protein 10	BC063296|MTMR10|54893|myotubularin related protein 10	NM_017762|MTMR10|54893|myotubularin related protein 10
hg19_v1_chr8_-_95565669_95565745	0.0469126	SOX2.p2	AB037850|KIAA1429|25962|KIAA1429	AF116724|KIAA1429|25962|KIAA1429	AL832487|KIAA1429|25962|KIAA1429	BC112288|KIAA1429|25962|KIAA1429	BC113380|KIAA1429|25962|KIAA1429	NM_015496|KIAA1429|25962|KIAA1429	NM_183009|KIAA1429|25962|KIAA1429
hg19_v1_chr19_-_44831907_44832079	0.0468902	SOX2.p2	AL122078|ZFP112|7771|zinc finger protein 112 homolog (mouse)	AK026230|ZFP112|7771|zinc finger protein 112 homolog (mouse)
hg19_v1_chr5_-_134735565_134735581	0.0468261	SOX2.p2	BC013331|H2AFY|9555|H2A histone family, member Y	AF054174|H2AFY|9555|H2A histone family, member Y	NM_004893|H2AFY|9555|H2A histone family, member Y
hg19_v1_chr18_+_33552587_33552747	0.0468156	SOX2.p2	NM_001201474|C18orf21|83608|chromosome 18 open reading frame 21	NM_001201475|C18orf21|83608|chromosome 18 open reading frame 21	NM_001201476|C18orf21|83608|chromosome 18 open reading frame 21	NM_031446|C18orf21|83608|chromosome 18 open reading frame 21	BC108730|C18orf21|83608|chromosome 18 open reading frame 21	BC119765|C18orf21|83608|chromosome 18 open reading frame 21	BC119766|C18orf21|83608|chromosome 18 open reading frame 21	AF277182|C18orf21|83608|chromosome 18 open reading frame 21	AF277189|C18orf21|83608|chromosome 18 open reading frame 21	BC025950|C18orf21|83608|chromosome 18 open reading frame 21
hg19_v1_chr9_-_113341772_113342356	0.0466313	SOX2.p2	AJ619977|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1	AY243503|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1	AK122605|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1	BC030816|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1	NM_153366|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
hg19_v1_chr6_+_170615838_170615848	0.0465908	SOX2.p2	BC012177|FAM120B|84498|family with sequence similarity 120B	NM_032448|FAM120B|84498|family with sequence similarity 120B	AK296825|FAM120B|84498|family with sequence similarity 120B	AK296730|FAM120B|84498|family with sequence similarity 120B
hg19_v1_chr11_-_3013479_3013521	0.0465367	SOX2.p2	BC022090|NAP1L4|4676|nucleosome assembly protein 1-like 4	AK316242|NAP1L4|4676|nucleosome assembly protein 1-like 4	AK316548|NAP1L4|4676|nucleosome assembly protein 1-like 4
hg19_v1_chr10_+_102672685_102672866	0.04648	SOX2.p2	AK292565|FAM178A|55719|family with sequence similarity 178, member A	AL832343|FAM178A|55719|family with sequence similarity 178, member A	AL833126|FAM178A|55719|family with sequence similarity 178, member A	BC015131|FAM178A|55719|family with sequence similarity 178, member A	BC047715|FAM178A|55719|family with sequence similarity 178, member A	BC030565|FAM178A|55719|family with sequence similarity 178, member A	BC064526|FAM178A|55719|family with sequence similarity 178, member A	BC020915|FAM178A|55719|family with sequence similarity 178, member A	BC073832|FAM178A|55719|family with sequence similarity 178, member A	AL832383|FAM178A|55719|family with sequence similarity 178, member A
hg19_v1_chr5_+_15500288_15500310	0.046445	SOX2.p2	AB020647|FBXL7|23194|F-box and leucine-rich repeat protein 7	NM_012304|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg19_v1_chr4_-_151936377_151936459	0.0463682	SOX2.p2	AF467287|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing	NM_001199282|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing	BC064834|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing
hg19_v1_chr1_-_240775448_240775461	0.0463279	SOX2.p2	AK024848|GREM2|64388|gremlin 2	NM_022469|GREM2|64388|gremlin 2
hg19_v1_chr15_-_34635306_34635364	0.0462848	SOX2.p2	BC008886|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)	BC063023|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)	AB043104|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)	NM_018648|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)
hg19_v1_chr13_+_96085852_96085857	0.0462095	SOX2.p2	NM_001160100|CLDN10|9071|claudin 10	NM_182848|CLDN10|9071|claudin 10	AK055855|CLDN10|9071|claudin 10
hg19_v1_chr1_+_173684061_173684131	0.0461958	SOX2.p2	NM_014458|KLHL20|27252|kelch-like 20 (Drosophila)	AK308048|KLHL20|27252|kelch-like 20 (Drosophila)	AK300755|KLHL20|27252|kelch-like 20 (Drosophila)	AK001430|KLHL20|27252|kelch-like 20 (Drosophila)
hg19_v1_chr6_-_2842069_2842096	0.0461149	SOX2.p2	BC009015|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	NM_030666|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	M93056|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	AK298044|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	AK312973|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	AK223370|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	AK291327|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1
hg19_v1_chr14_+_20923364_20923443	0.0461029	SOX2.p2	AK291100|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BX161454|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	S43127|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BC002338|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BC019291|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BC008145|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	M81955|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	X59764|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	D90373|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BC004979|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	M80261|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	U79268|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1
hg19_v1_chr2_+_128928040_128928054	0.0460948	SOX2.p2	AK074376|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1
hg19_v1_chr1_+_192544856_192544961	0.0460764	SOX2.p2	NM_002922|RGS1|5996|regulator of G-protein signaling 1	AK303138|RGS1|5996|regulator of G-protein signaling 1	AK315607|RGS1|5996|regulator of G-protein signaling 1	AK093544|RGS1|5996|regulator of G-protein signaling 1	BC015510|RGS1|5996|regulator of G-protein signaling 1	X73427|RGS1|5996|regulator of G-protein signaling 1	DQ890651|RGS1|5996|regulator of G-protein signaling 1	DQ893831|RGS1|5996|regulator of G-protein signaling 1	AF493925|RGS1|5996|regulator of G-protein signaling 1	BT006668|RGS1|5996|regulator of G-protein signaling 1
hg19_v1_chr12_+_27397179_27397195	0.0460626	SOX2.p2	AK291055|STK38L|23012|serine/threonine kinase 38 like
hg19_v1_chr18_+_32556891_32557027	0.0459849	SOX2.p2	NM_001143826|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2
hg19_v1_chr5_+_99871023_99871123	0.0459801	SOX2.p2	AY359108|FAM174A|345757|family with sequence similarity 174, member A	AK289539|FAM174A|345757|family with sequence similarity 174, member A	BC027332|FAM174A|345757|family with sequence similarity 174, member A	NM_198507|FAM174A|345757|family with sequence similarity 174, member A
hg19_v1_chr11_-_113577023_113577094	0.0459602	SOX2.p2	AK295366|TMPRSS5|80975|transmembrane protease, serine 5	BC047222|TMPRSS5|80975|transmembrane protease, serine 5	AK294313|TMPRSS5|80975|transmembrane protease, serine 5	BC028065|TMPRSS5|80975|transmembrane protease, serine 5	BC121802|TMPRSS5|80975|transmembrane protease, serine 5	BC121803|TMPRSS5|80975|transmembrane protease, serine 5	NM_030770|TMPRSS5|80975|transmembrane protease, serine 5	AB028140|TMPRSS5|80975|transmembrane protease, serine 5
hg19_v1_chr11_+_33037727_33037727	0.0458921	SOX2.p2	AF447588|DEPDC7|91614|DEP domain containing 7	NM_139160|DEPDC7|91614|DEP domain containing 7
hg19_v1_chr11_-_61560052_61560088	0.0458864	SOX2.p2	BC002750|C11orf10|746|chromosome 11 open reading frame 10	AF085986|C11orf10|746|chromosome 11 open reading frame 10	AK291683|C11orf10|746|chromosome 11 open reading frame 10	AF086763|C11orf10|746|chromosome 11 open reading frame 10	BC015968|C11orf10|746|chromosome 11 open reading frame 10	AF070661|C11orf10|746|chromosome 11 open reading frame 10	NM_014206|C11orf10|746|chromosome 11 open reading frame 10
hg19_v1_chr14_+_23563888_23563979	0.0458245	SOX2.p2	AK024794|C14orf119|55017|chromosome 14 open reading frame 119
hg19_v1_chr5_-_122759003_122759285	0.0458012	SOX2.p2	BC040527|CEP120|153241|centrosomal protein 120kDa	BC144558|CEP120|153241|centrosomal protein 120kDa	AK296999|CEP120|153241|centrosomal protein 120kDa	AK095646|CEP120|153241|centrosomal protein 120kDa	NM_001166226|CEP120|153241|centrosomal protein 120kDa	NM_153223|CEP120|153241|centrosomal protein 120kDa
hg19_v1_chr3_-_42917632_42917632	0.045725	SOX2.p2	NM_004391|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1
hg19_v1_chr19_+_3572950_3572957	0.0456746	SOX2.p2	BC002552|HMG20B|10362|high mobility group 20B	AK289500|HMG20B|10362|high mobility group 20B	BC003505|HMG20B|10362|high mobility group 20B
hg19_v1_chr14_-_25519076_25519401	0.0456623	SOX2.p2	BC067278|STXBP6|29091|syntaxin binding protein 6 (amisyn)	NM_014178|STXBP6|29091|syntaxin binding protein 6 (amisyn)	AK096957|STXBP6|29091|syntaxin binding protein 6 (amisyn)	AL834346|STXBP6|29091|syntaxin binding protein 6 (amisyn)	BC009499|STXBP6|29091|syntaxin binding protein 6 (amisyn)
hg19_v1_chr20_+_19955778_19955941	0.0455571	SOX2.p2	M37190|RIN2|54453|Ras and Rab interactor 2
hg19_v1_chrX_-_107682600_107682726	0.0454889	SOX2.p2	BT007228|COL4A6|1288|collagen, type IV, alpha 6	L22763|COL4A6|1288|collagen, type IV, alpha 6	U04845|COL4A6|1288|collagen, type IV, alpha 6	NM_001847|COL4A6|1288|collagen, type IV, alpha 6	BC005305|COL4A6|1288|collagen, type IV, alpha 6
hg19_v1_chr8_+_126010748_126010804	0.0453453	SOX2.p2	BX647400|SQLE|6713|squalene epoxidase
hg19_v1_chr14_-_88459459_88459468	0.0451845	SOX2.p2	DQ891232|GALC|2581|galactosylceramidase	DQ894416|GALC|2581|galactosylceramidase	BC036518|GALC|2581|galactosylceramidase
hg19_v1_chr11_-_790103_790125	0.0449409	SOX2.p2	BC034732|CEND1|51286|cell cycle exit and neuronal differentiation 1	AK074547|CEND1|51286|cell cycle exit and neuronal differentiation 1	AK312993|CEND1|51286|cell cycle exit and neuronal differentiation 1	NM_016564|CEND1|51286|cell cycle exit and neuronal differentiation 1
hg19_v1_chr4_-_17783134_17783134	0.0449306	SOX2.p2	AK308144|FAM184B|27146|family with sequence similarity 184, member B	NM_015688|FAM184B|27146|family with sequence similarity 184, member B
hg19_v1_chr8_-_124054491_124054524	0.044905	SOX2.p2	BC002457|DERL1|79139|Der1-like domain family, member 1
hg19_v1_chr9_+_66457288_66457315	0.0448915	SOX2.p2	
hg19_v1_chr14_-_38064176_38064237	0.044847	SOX2.p2	AM392863|FOXA1|3169|forkhead box A1	AM393239|FOXA1|3169|forkhead box A1	AM393310|FOXA1|3169|forkhead box A1	AM393369|FOXA1|3169|forkhead box A1	BC033890|FOXA1|3169|forkhead box A1
hg19_v1_chr16_+_2564000_2564104	0.0448051	SOX2.p2	BT007155|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR541930|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	CR541951|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg19_v1_chr15_-_64995459_64995479	0.0447509	SOX2.p2	BC047755|OAZ2|4947|ornithine decarboxylase antizyme 2	NM_002537|OAZ2|4947|ornithine decarboxylase antizyme 2
hg19_v1_chr4_-_103265818_103265919	0.0447483	SOX2.p2	DQ892212|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	DQ895407|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8
hg19_v1_chr1_-_247171302_247171323	0.0447232	SOX2.p2	BC023527|ZNF695|57116|zinc finger protein 695
hg19_v1_chr22_+_38864015_38864237	0.0446213	SOX2.p2	AK292102|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	AL035082|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	NM_006855|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	NM_016657|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	AK222930|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	BC001277|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	AK129888|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	AK223238|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	AL035081|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	BC096722|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	BC098131|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	BC098156|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	BC098336|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	CR456509|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	CU013108|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	CU013396|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	DQ891740|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	DQ894917|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3
hg19_v1_chr14_+_57857313_57857352	0.0446112	SOX2.p2	BC118589|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit	BC122557|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit
hg19_v1_chr19_+_58144510_58144621	0.0446055	SOX2.p2	NM_006385|ZNF211|10520|zinc finger protein 211	NM_198855|ZNF211|10520|zinc finger protein 211	AK294869|ZNF211|10520|zinc finger protein 211	BC018138|ZNF211|10520|zinc finger protein 211	AK296942|ZNF211|10520|zinc finger protein 211	AK297047|ZNF211|10520|zinc finger protein 211	AK304666|ZNF211|10520|zinc finger protein 211	BC110856|ZNF211|10520|zinc finger protein 211	BC034351|ZNF211|10520|zinc finger protein 211	AK026941|ZNF211|10520|zinc finger protein 211
hg19_v1_chr4_+_26322647_26322717	0.0446016	SOX2.p2	BC053568|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	BC064976|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region
hg19_v1_chr6_-_32119717_32119723	0.0445945	SOX2.p2	AK054885|PRRT1|80863|proline-rich transmembrane protein 1	NM_030651|PRRT1|80863|proline-rich transmembrane protein 1
hg19_v1_chr4_+_75023807_75023924	0.0445676	SOX2.p2	BC037529|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like	NM_001144978|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like	BC041943|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like
hg19_v1_chr3_+_97158453_97158489	0.0445155	SOX2.p2	AK302040|EPHA6|285220|EPH receptor A6	AK310249|EPHA6|285220|EPH receptor A6	BC031881|EPHA6|285220|EPH receptor A6	BC067287|EPHA6|285220|EPH receptor A6	AK302080|EPHA6|285220|EPH receptor A6	AL133666|EPHA6|285220|EPH receptor A6	NM_173655|EPHA6|285220|EPH receptor A6
hg19_v1_chr5_-_140053126_140053170	0.0445092	SOX2.p2	AY321065|DND1|373863|dead end homolog 1 (zebrafish)	DQ892455|DND1|373863|dead end homolog 1 (zebrafish)	DQ895667|DND1|373863|dead end homolog 1 (zebrafish)	EU176217|DND1|373863|dead end homolog 1 (zebrafish)	BC033496|DND1|373863|dead end homolog 1 (zebrafish)	NM_194249|DND1|373863|dead end homolog 1 (zebrafish)
hg19_v1_chr7_-_135613197_135613244	0.0444991	SOX2.p2	AF130088|LUZP6|767558|leucine zipper protein 6
hg19_v1_chr1_-_154193073_154193272	0.0444898	SOX2.p2	BC000152|C1orf43|25912|chromosome 1 open reading frame 43	AF077036|C1orf43|25912|chromosome 1 open reading frame 43	BC088353|C1orf43|25912|chromosome 1 open reading frame 43	AJ243663|C1orf43|25912|chromosome 1 open reading frame 43	BC006514|C1orf43|25912|chromosome 1 open reading frame 43	NM_001098616|C1orf43|25912|chromosome 1 open reading frame 43	NM_015449|C1orf43|25912|chromosome 1 open reading frame 43	NM_138740|C1orf43|25912|chromosome 1 open reading frame 43
hg19_v1_chr3_-_45267620_45267797	0.0444562	SOX2.p2	AB078417|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	AF438313|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	BC057390|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)
hg19_v1_chr15_+_52201590_52201630	0.0444427	SOX2.p2	AK025704|TMOD3|29766|tropomodulin 3 (ubiquitous)
hg19_v1_chr4_+_2471179_2471182	0.0443733	SOX2.p2	NM_001185009|RNF4|6047|ring finger protein 4	BC031935|RNF4|6047|ring finger protein 4
hg19_v1_chr11_-_61735108_61735187	0.0443417	SOX2.p2	NM_002032|FTH1|2495|ferritin, heavy polypeptide 1
hg19_v1_chr20_-_4804067_4804321	0.0443094	SOX2.p2	CR627436|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AK291458|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AK222650|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AY154470|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	D79990|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	NM_014737|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2
hg19_v1_chr2_+_204571197_204571363	0.0442834	SOX2.p2	NM_001243077|CD28|940|CD28 molecule	NM_001243078|CD28|940|CD28 molecule	NM_006139|CD28|940|CD28 molecule	AJ517504|CD28|940|CD28 molecule	AK313313|CD28|940|CD28 molecule	J02988|CD28|940|CD28 molecule	AK303421|CD28|940|CD28 molecule
hg19_v1_chr2_-_169746921_169746962	0.0441794	SOX2.p2	AF225416|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	BC022255|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	NM_020675|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	AK291093|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)
hg19_v1_chrX_+_70752911_70752940	0.0441316	SOX2.p2	NM_181672|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	NM_181673|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	AL833085|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
hg19_v1_chr19_-_11450254_11450347	0.0440567	SOX2.p2	AF081353|RAB3D|9545|RAB3D, member RAS oncogene family	BC016471|RAB3D|9545|RAB3D, member RAS oncogene family	AK313538|RAB3D|9545|RAB3D, member RAS oncogene family	NM_004283|RAB3D|9545|RAB3D, member RAS oncogene family
hg19_v1_chr6_+_4776826_4777016	0.044042	SOX2.p2	BC119682|CDYL|9425|chromodomain protein, Y-like
hg19_v1_chr12_-_123706393_123706440	0.0439839	SOX2.p2	BC130440|MPHOSPH9|10198|M-phase phosphoprotein 9	BC144016|MPHOSPH9|10198|M-phase phosphoprotein 9	BC144017|MPHOSPH9|10198|M-phase phosphoprotein 9	AK091181|MPHOSPH9|10198|M-phase phosphoprotein 9	NM_022782|MPHOSPH9|10198|M-phase phosphoprotein 9
hg19_v1_chr14_-_102976096_102976133	0.0439459	SOX2.p2	BX161460|ANKRD9|122416|ankyrin repeat domain 9	NM_152326|ANKRD9|122416|ankyrin repeat domain 9
hg19_v1_chr8_+_146277830_146277971	0.0439337	SOX2.p2	BX648996|C8orf33|65265|chromosome 8 open reading frame 33	BC010001|C8orf33|65265|chromosome 8 open reading frame 33	CR457330|C8orf33|65265|chromosome 8 open reading frame 33
hg19_v1_chr21_-_27512668_27512777	0.0439099	SOX2.p2	AK295621|APP|351|amyloid beta (A4) precursor protein	NM_001136016|APP|351|amyloid beta (A4) precursor protein	AK311717|APP|351|amyloid beta (A4) precursor protein
hg19_v1_chr20_-_58507172_58507208	0.0438879	SOX2.p2	BC132864|SYCP2|10388|synaptonemal complex protein 2	BC132870|SYCP2|10388|synaptonemal complex protein 2	NM_014258|SYCP2|10388|synaptonemal complex protein 2
hg19_v1_chr12_+_98909410_98909413	0.0438714	SOX2.p2	AB209297|TMPO|7112|thymopoietin
hg19_v1_chr3_-_57583080_57583087	0.0438537	SOX2.p2	BC008753|ARF4|378|ADP-ribosylation factor 4
hg19_v1_chr10_+_70748476_70748594	0.0438114	SOX2.p2	NM_015634|KIAA1279|26128|KIAA1279	AB033105|KIAA1279|26128|KIAA1279	BC006427|KIAA1279|26128|KIAA1279	AK291343|KIAA1279|26128|KIAA1279	BC012180|KIAA1279|26128|KIAA1279
hg19_v1_chr11_+_68115423_68115450	0.0438113	SOX2.p2	AF088027|LRP5|4041|low density lipoprotein receptor-related protein 5
hg19_v1_chr1_-_241799101_241799231	0.0437582	SOX2.p2	BC117360|CHML|1122|choroideremia-like (Rab escort protein 2)	NM_001821|CHML|1122|choroideremia-like (Rab escort protein 2)	X64728|CHML|1122|choroideremia-like (Rab escort protein 2)
hg19_v1_chr6_-_38670915_38670919	0.0436687	SOX2.p2	AK293345|GLO1|2739|glyoxalase I	D13315|GLO1|2739|glyoxalase I
hg19_v1_chr9_-_132586440_132586534	0.0436489	SOX2.p2	NM_000113|TOR1A|1861|torsin family 1, member A (torsin A)	AK294677|TOR1A|1861|torsin family 1, member A (torsin A)
hg19_v1_chr5_-_176900653_176900693	0.0436419	SOX2.p2	NM_004395|DBN1|1627|drebrin 1
hg19_v1_chr19_+_50180408_50180491	0.0435063	SOX2.p2	AK304660|PRMT1|3276|protein arginine methyltransferase 1	NM_001207042|PRMT1|3276|protein arginine methyltransferase 1	NM_001536|PRMT1|3276|protein arginine methyltransferase 1	NM_198318|PRMT1|3276|protein arginine methyltransferase 1
hg19_v1_chr2_-_39664129_39664290	0.0434671	SOX2.p2	EU832785|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	GQ129258|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	NM_003618|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	AK314487|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3
hg19_v1_chr12_-_30830143_30830177	0.0433443	SOX2.p2	AK302260|IPO8|10526|importin 8	NM_001190995|IPO8|10526|importin 8
hg19_v1_chr20_+_34042908_34043241	0.043344	SOX2.p2	AK307861|CEP250|11190|centrosomal protein 250kDa	AF049105|CEP250|11190|centrosomal protein 250kDa	NM_007186|CEP250|11190|centrosomal protein 250kDa
hg19_v1_chr8_-_18871163_18871410	0.0432509	SOX2.p2	AK091317|PSD3|23362|pleckstrin and Sec7 domain containing 3	NM_015310|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg19_v1_chr18_-_53089722_53089722	0.0430909	SOX2.p2	AK300612|TCF4|6925|transcription factor 4	NM_001243233|TCF4|6925|transcription factor 4
hg19_v1_chr3_-_15839674_15839690	0.0429794	SOX2.p2	AK293770|ANKRD28|23243|ankyrin repeat domain 28	NM_001195098|ANKRD28|23243|ankyrin repeat domain 28
hg19_v1_chr14_-_54955664_54955707	0.0429017	SOX2.p2	M86492|GMFB|2764|glia maturation factor, beta	AB209240|GMFB|2764|glia maturation factor, beta	AK311753|GMFB|2764|glia maturation factor, beta	BC005359|GMFB|2764|glia maturation factor, beta
hg19_v1_chr6_-_112080284_112080333	0.0428876	SOX2.p2	BC032496|FYN|2534|FYN oncogene related to SRC, FGR, YES	NM_153048|FYN|2534|FYN oncogene related to SRC, FGR, YES
hg19_v1_chr12_-_121734543_121734708	0.04268	SOX2.p2	NM_172226|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta
hg19_v1_chr3_-_129158675_129158761	0.0426764	SOX2.p2	AM180876|MBD4|8930|methyl-CpG binding domain protein 4	CR450305|MBD4|8930|methyl-CpG binding domain protein 4	BC034463|MBD4|8930|methyl-CpG binding domain protein 4	BC011752|MBD4|8930|methyl-CpG binding domain protein 4
hg19_v1_chr3_-_149095517_149095567	0.0426072	SOX2.p2	BC034145|TM4SF1|4071|transmembrane 4 L six family member 1	AK130271|TM4SF1|4071|transmembrane 4 L six family member 1	NM_014220|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr4_-_120550142_120550183	0.0426033	SOX2.p2	
hg19_v1_chr9_-_37465429_37465453	0.042602	SOX2.p2	AK292404|ZBTB5|9925|zinc finger and BTB domain containing 5
hg19_v1_chr12_-_56709831_56710127	0.0425516	SOX2.p2	AY032624|CNPY2|10330|canopy 2 homolog (zebrafish)	AY359102|CNPY2|10330|canopy 2 homolog (zebrafish)	NM_001190991|CNPY2|10330|canopy 2 homolog (zebrafish)	NM_014255|CNPY2|10330|canopy 2 homolog (zebrafish)
hg19_v1_chr6_+_34204647_34204654	0.0424308	SOX2.p2	AK096863|HMGA1|3159|high mobility group AT-hook 1	M23616|HMGA1|3159|high mobility group AT-hook 1	M23617|HMGA1|3159|high mobility group AT-hook 1	NM_145901|HMGA1|3159|high mobility group AT-hook 1	NM_145902|HMGA1|3159|high mobility group AT-hook 1	AK301434|HMGA1|3159|high mobility group AT-hook 1
hg19_v1_chr1_+_225997804_225997851	0.0424241	SOX2.p2	U34722|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	BC095430|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	BC003567|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	BC008291|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)
hg19_v1_chr5_+_38403633_38403649	0.0423705	SOX2.p2	NM_182798|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains	AK097549|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains	BC031251|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains
hg19_v1_chr4_+_2819888_2819939	0.0423653	SOX2.p2	NM_001145856|SH3BP2|6452|SH3-domain binding protein 2	U56386|SH3BP2|6452|SH3-domain binding protein 2
hg19_v1_chr6_+_28249313_28249487	0.0423479	SOX2.p2	NM_001184743|PGBD1|84547|piggyBac transposable element derived 1	NM_032507|PGBD1|84547|piggyBac transposable element derived 1	AK223446|PGBD1|84547|piggyBac transposable element derived 1	AK291228|PGBD1|84547|piggyBac transposable element derived 1	BC032507|PGBD1|84547|piggyBac transposable element derived 1	BC040117|PGBD1|84547|piggyBac transposable element derived 1	BC128585|PGBD1|84547|piggyBac transposable element derived 1	BC069033|PGBD1|84547|piggyBac transposable element derived 1
hg19_v1_chr1_+_40859016_40859016	0.0423281	SOX2.p2	AK308280|SMAP2|64744|small ArfGAP2	NM_001198979|SMAP2|64744|small ArfGAP2
hg19_v1_chr5_+_92920592_92920744	0.0423094	SOX2.p2	BC004154|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	HQ709180|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	HQ709181|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	HQ709182|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	HQ709183|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	X16155|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1
hg19_v1_chr14_+_75229995_75230069	0.0423051	SOX2.p2	AK095760|YLPM1|56252|YLP motif containing 1	NM_019589|YLPM1|56252|YLP motif containing 1
hg19_v1_chr1_-_33502464_33502469	0.042268	SOX2.p2	AB005621|AK2|204|adenylate kinase 2
hg19_v1_chr17_+_61627850_61627879	0.0422061	SOX2.p2	AK303212|DCAF7|10238|DDB1 and CUL4 associated factor 7
hg19_v1_chr4_-_44728518_44728611	0.0422002	SOX2.p2	AK296051|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AB209904|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AK055639|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AY173948|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AK129655|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AF247786|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	NM_138335|GNPDA2|132789|glucosamine-6-phosphate deaminase 2
hg19_v1_chr19_+_2977480_2977652	0.0421726	SOX2.p2	NM_001143986|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	NM_024760|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	AK024071|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	BC013986|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	BC020206|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	BC007329|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	BC068052|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)
hg19_v1_chr1_-_154155680_154155684	0.0421678	SOX2.p2	AK301674|TPM3|7170|tropomyosin 3	AK315504|TPM3|7170|tropomyosin 3	BX648485|TPM3|7170|tropomyosin 3
hg19_v1_chr14_+_52781004_52781266	0.0421141	SOX2.p2	NM_000956|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa	U19487|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa	BC093927|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa	BC093929|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa	AY275471|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa	X83868|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa
hg19_v1_chr2_-_87303105_87303560	0.0421022	SOX2.p2	BC132791|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene	BC132793|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene
hg19_v1_chr15_-_37390372_37390561	0.0420822	SOX2.p2	EU831754|MEIS2|4212|Meis homeobox 2	EU831831|MEIS2|4212|Meis homeobox 2	AK294411|MEIS2|4212|Meis homeobox 2	AK311546|MEIS2|4212|Meis homeobox 2	AK056038|MEIS2|4212|Meis homeobox 2	NM_172315|MEIS2|4212|Meis homeobox 2
hg19_v1_chr17_+_61627841_61627849	0.042006	SOX2.p2	BC001264|DCAF7|10238|DDB1 and CUL4 associated factor 7
hg19_v1_chr3_-_128890551_128890602	0.0419329	SOX2.p2	BT019613|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein
hg19_v1_chr16_+_68573115_68573281	0.0419008	SOX2.p2	BC140886|ZFP90|146198|zinc finger protein 90 homolog (mouse)	BC140887|ZFP90|146198|zinc finger protein 90 homolog (mouse)	AK316251|ZFP90|146198|zinc finger protein 90 homolog (mouse)	AK074332|ZFP90|146198|zinc finger protein 90 homolog (mouse)	AK304152|ZFP90|146198|zinc finger protein 90 homolog (mouse)	BC040486|ZFP90|146198|zinc finger protein 90 homolog (mouse)
hg19_v1_chr9_-_132597500_132597538	0.0418974	SOX2.p2	AF218421|C9orf78|51759|chromosome 9 open reading frame 78	BC007664|C9orf78|51759|chromosome 9 open reading frame 78	BC017570|C9orf78|51759|chromosome 9 open reading frame 78
hg19_v1_chr17_+_61627916_61627973	0.0417392	SOX2.p2	U94747|DCAF7|10238|DDB1 and CUL4 associated factor 7
hg19_v1_chr14_-_88459469_88459650	0.0417385	SOX2.p2	D25283|GALC|2581|galactosylceramidase	D25284|GALC|2581|galactosylceramidase	AK296530|GALC|2581|galactosylceramidase	L23116|GALC|2581|galactosylceramidase	AK294040|GALC|2581|galactosylceramidase	NM_000153|GALC|2581|galactosylceramidase	NM_001201401|GALC|2581|galactosylceramidase
hg19_v1_chr6_+_170615849_170615911	0.0416791	SOX2.p2	AB058741|FAM120B|84498|family with sequence similarity 120B	AL832883|FAM120B|84498|family with sequence similarity 120B
hg19_v1_chr2_-_128615691_128615704	0.0416754	SOX2.p2	U85510|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D	BC017205|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D
hg19_v1_chr3_+_179280738_179280744	0.041625	SOX2.p2	AF041474|ACTL6A|86|actin-like 6A
hg19_v1_chr3_+_155588479_155588659	0.0415604	SOX2.p2	AK315832|GMPS|8833|guanine monphosphate synthetase	U10860|GMPS|8833|guanine monphosphate synthetase	DQ896621|GMPS|8833|guanine monphosphate synthetase	EU176462|GMPS|8833|guanine monphosphate synthetase
hg19_v1_chr7_+_29519485_29519485	0.0415445	SOX2.p2	NM_001039936|CHN2|1124|chimerin (chimaerin) 2
hg19_v1_chr1_+_43148096_43148097	0.0414622	SOX2.p2	AK309996|YBX1|4904|Y box binding protein 1	AK311708|YBX1|4904|Y box binding protein 1
hg19_v1_chr12_-_59314297_59314307	0.0414587	SOX2.p2	AK292857|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3
hg19_v1_chr2_-_164592512_164592522	0.0414427	SOX2.p2	BX649105|FIGN|55137|fidgetin	NM_018086|FIGN|55137|fidgetin	AK125324|FIGN|55137|fidgetin
hg19_v1_chr8_+_92114846_92114872	0.0414168	SOX2.p2	AK097393|LRRC69|100130742|leucine rich repeat containing 69	NM_001129890|LRRC69|100130742|leucine rich repeat containing 69	AK130865|LRRC69|100130742|leucine rich repeat containing 69
hg19_v1_chr7_-_64451413_64451413	0.0413813	SOX2.p2	M55422|ZNF117|51351|zinc finger protein 117	NM_015852|ZNF117|51351|zinc finger protein 117
hg19_v1_chr1_+_43148098_43148102	0.0410954	SOX2.p2	BC070084|YBX1|4904|Y box binding protein 1
hg19_v1_chr9_-_127533397_127533624	0.0410701	SOX2.p2	HQ692858|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1	HQ709185|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1	U80802|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1	AF004291|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1	NM_001489|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1	NM_033334|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1	S83309|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1	BC030600|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1	BC042395|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1	BC042406|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1
hg19_v1_chr22_-_41940319_41940388	0.041034	SOX2.p2	AB051452|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)	BC088367|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)	BC017248|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)
hg19_v1_chr12_-_11244828_11244911	0.0409719	SOX2.p2	HQ258369|TAS2R31|259290|taste receptor, type 2, member 31	BC117423|TAS2R43|259289|taste receptor, type 2, member 43	NM_176884|TAS2R43|259289|taste receptor, type 2, member 43
hg19_v1_chr12_-_56679729_56679874	0.0409103	SOX2.p2	BC000105|CS|1431|citrate synthase	AF147410|CS|1431|citrate synthase	AK293263|CS|1431|citrate synthase
hg19_v1_chr10_+_35415768_35415957	0.0407075	SOX2.p2	NM_001881|CREM|1390|cAMP responsive element modulator	NM_182850|CREM|1390|cAMP responsive element modulator	NM_182853|CREM|1390|cAMP responsive element modulator	NM_183013|CREM|1390|cAMP responsive element modulator	BC066342|CREM|1390|cAMP responsive element modulator	BC017117|CREM|1390|cAMP responsive element modulator
hg19_v1_chr2_+_231729638_231729653	0.0404128	SOX2.p2	AK075361|ITM2C|81618|integral membrane protein 2C	AK090975|ITM2C|81618|integral membrane protein 2C	AK303199|ITM2C|81618|integral membrane protein 2C
hg19_v1_chr2_-_103353300_103353367	0.0403893	SOX2.p2	AK290589|MFSD9|84804|major facilitator superfamily domain containing 9	AK075376|MFSD9|84804|major facilitator superfamily domain containing 9	BC006242|MFSD9|84804|major facilitator superfamily domain containing 9	AK307178|MFSD9|84804|major facilitator superfamily domain containing 9	NM_032718|MFSD9|84804|major facilitator superfamily domain containing 9	AK296768|MFSD9|84804|major facilitator superfamily domain containing 9
hg19_v1_chr4_-_113558021_113558072	0.0403389	SOX2.p2	BC044799|C4orf21|55345|chromosome 4 open reading frame 21	BC028584|C4orf21|55345|chromosome 4 open reading frame 21	AK002193|C4orf21|55345|chromosome 4 open reading frame 21
hg19_v1_chr4_+_83351956_83351982	0.0403288	SOX2.p2	CR457141|ENOPH1|58478|enolase-phosphatase 1
hg19_v1_chr5_-_43603103_43603285	0.04032	SOX2.p2	
hg19_v1_chr7_+_44836309_44836323	0.0402599	SOX2.p2	Y00052|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	DQ892625|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	DQ895865|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AB451307|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AB451438|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR456707|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)
hg19_v1_chr10_+_7745284_7745320	0.0402292	SOX2.p2	AK291379|ITIH2|3698|inter-alpha-trypsin inhibitor heavy chain 2
hg19_v1_chr14_-_21852424_21852424	0.0401297	SOX2.p2	AK024072|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	NM_007192|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)
hg19_v1_chr11_+_20044362_20044414	0.0400826	SOX2.p2	AK298346|NAV2|89797|neuron navigator 2	AJ488208|NAV2|89797|neuron navigator 2
hg19_v1_chr3_+_100053544_100053671	0.0400293	SOX2.p2	NM_020202|NIT2|56954|nitrilase family, member 2	AF260334|NIT2|56954|nitrilase family, member 2	BC107890|NIT2|56954|nitrilase family, member 2	AK225979|NIT2|56954|nitrilase family, member 2	AK294010|NIT2|56954|nitrilase family, member 2	BC020620|NIT2|56954|nitrilase family, member 2	AF284574|NIT2|56954|nitrilase family, member 2	AK313704|NIT2|56954|nitrilase family, member 2
hg19_v1_chr11_+_22696318_22696354	0.0400015	SOX2.p2	NM_005256|GAS2|2620|growth arrest-specific 2	U95032|GAS2|2620|growth arrest-specific 2
hg19_v1_chr4_+_86851425_86851425	0.039939	SOX2.p2	AL136646|ARHGAP24|83478|Rho GTPase activating protein 24	NM_031305|ARHGAP24|83478|Rho GTPase activating protein 24
hg19_v1_chr4_-_15939949_15939972	0.0398504	SOX2.p2	BC003628|FGFBP1|9982|fibroblast growth factor binding protein 1	M60047|FGFBP1|9982|fibroblast growth factor binding protein 1	BC008910|FGFBP1|9982|fibroblast growth factor binding protein 1	BC018852|FGFBP1|9982|fibroblast growth factor binding protein 1	AK291307|FGFBP1|9982|fibroblast growth factor binding protein 1
hg19_v1_chr2_+_231729701_231729743	0.039699	SOX2.p2	AY049777|ITM2C|81618|integral membrane protein 2C	EU831609|ITM2C|81618|integral membrane protein 2C	EU831632|ITM2C|81618|integral membrane protein 2C	EU831696|ITM2C|81618|integral membrane protein 2C	EU832488|ITM2C|81618|integral membrane protein 2C	EU832568|ITM2C|81618|integral membrane protein 2C	AB003629|ITM2C|81618|integral membrane protein 2C	CR457208|ITM2C|81618|integral membrane protein 2C
hg19_v1_chr12_-_56753912_56753915	0.0396902	SOX2.p2	AK308051|STAT2|6773|signal transducer and activator of transcription 2, 113kDa
hg19_v1_chr16_+_31724577_31724626	0.039657	SOX2.p2	AK128671|ZNF720|124411|zinc finger protein 720	BC018134|ZNF720|124411|zinc finger protein 720
hg19_v1_chr13_+_53216564_53216567	0.0394975	SOX2.p2	BC108266|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2
hg19_v1_chr10_-_52645384_52645402	0.0394853	SOX2.p2	BC022263|A1CF|29974|APOBEC1 complementation factor	AF209192|A1CF|29974|APOBEC1 complementation factor	AK291982|A1CF|29974|APOBEC1 complementation factor	AK303801|A1CF|29974|APOBEC1 complementation factor
hg19_v1_chr6_-_84140854_84140954	0.0393921	SOX2.p2	NM_002395|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic
hg19_v1_chr9_-_35072545_35072569	0.0393713	SOX2.p2	BC121794|VCP|7415|valosin containing protein	BC122550|VCP|7415|valosin containing protein	BC110913|VCP|7415|valosin containing protein	AF100752|VCP|7415|valosin containing protein
hg19_v1_chr3_+_113616317_113616402	0.0393174	SOX2.p2	AK304142|GRAMD1C|54762|GRAM domain containing 1C	NM_001172105|GRAMD1C|54762|GRAM domain containing 1C	AY358725|GRAMD1C|54762|GRAM domain containing 1C	AK292964|GRAMD1C|54762|GRAM domain containing 1C
hg19_v1_chr4_+_78078394_78078526	0.0393051	SOX2.p2	U47414|CCNG2|901|cyclin G2
hg19_v1_chr19_-_56739658_56739679	0.0392001	SOX2.p2	BC002636|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A	NM_024303|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A	AK098700|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A
hg19_v1_chr2_-_74781061_74781087	0.0392	SOX2.p2	AF311313|LOXL3|84695|lysyl oxidase-like 3	NM_032603|LOXL3|84695|lysyl oxidase-like 3	AF284815|LOXL3|84695|lysyl oxidase-like 3	AF282619|LOXL3|84695|lysyl oxidase-like 3	AK309474|LOXL3|84695|lysyl oxidase-like 3
hg19_v1_chr3_-_129158779_129158816	0.0391945	SOX2.p2	AK312878|MBD4|8930|methyl-CpG binding domain protein 4	AF114784|MBD4|8930|methyl-CpG binding domain protein 4
hg19_v1_chr8_-_72274466_72274485	0.039102	SOX2.p2	AJ000098|EYA1|2138|eyes absent homolog 1 (Drosophila)	NM_000503|EYA1|2138|eyes absent homolog 1 (Drosophila)
hg19_v1_chr8_+_11660297_11660341	0.0389618	SOX2.p2	L06105|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	BC029641|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	BC034440|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	L06070|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	BT006704|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR457033|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	DQ890697|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	DQ893882|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1
hg19_v1_chr18_+_32820987_32821106	0.0388888	SOX2.p2	NM_001135178|ZNF397|84307|zinc finger protein 397	NM_032347|ZNF397|84307|zinc finger protein 397	AF533250|ZNF397|84307|zinc finger protein 397	AY157641|ZNF397|84307|zinc finger protein 397	AK311533|ZNF397|84307|zinc finger protein 397	AK027384|ZNF397|84307|zinc finger protein 397	BC006172|ZNF397|84307|zinc finger protein 397
hg19_v1_chr2_-_242556883_242556915	0.0388823	SOX2.p2	AK225608|THAP4|51078|THAP domain containing 4	AF132970|THAP4|51078|THAP domain containing 4	NM_001164356|THAP4|51078|THAP domain containing 4
hg19_v1_chr1_+_76540374_76540550	0.0388449	SOX2.p2	NM_001160011|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	NM_152996|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AK091215|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	BC059363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AK297363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AY358540|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AJ507291|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
hg19_v1_chr12_+_57916607_57916693	0.0388407	SOX2.p2	AK056399|MBD6|114785|methyl-CpG binding domain protein 6	AK296990|MBD6|114785|methyl-CpG binding domain protein 6	NM_052897|MBD6|114785|methyl-CpG binding domain protein 6	BC065530|MBD6|114785|methyl-CpG binding domain protein 6
hg19_v1_chr15_+_65914269_65914269	0.0387635	SOX2.p2	AF062922|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1	NM_004727|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
hg19_v1_chr12_+_45609867_45609875	0.0387632	SOX2.p2	AK302819|ANO6|196527|anoctamin 6	NM_001142680|ANO6|196527|anoctamin 6
hg19_v1_chr5_+_65222381_65222437	0.0386532	SOX2.p2	NM_001006600|ERBB2IP|55914|erbb2 interacting protein	NM_001253697|ERBB2IP|55914|erbb2 interacting protein	NM_001253698|ERBB2IP|55914|erbb2 interacting protein	NM_001253699|ERBB2IP|55914|erbb2 interacting protein	NM_001253701|ERBB2IP|55914|erbb2 interacting protein	NM_018695|ERBB2IP|55914|erbb2 interacting protein	AF263744|ERBB2IP|55914|erbb2 interacting protein	AK295708|ERBB2IP|55914|erbb2 interacting protein	AK304693|ERBB2IP|55914|erbb2 interacting protein
hg19_v1_chr1_-_151688791_151688881	0.0385675	SOX2.p2	AB209264|CELF3|11189|CUGBP, Elav-like family member 3	NM_001172648|CELF3|11189|CUGBP, Elav-like family member 3	NM_001172649|CELF3|11189|CUGBP, Elav-like family member 3
hg19_v1_chr11_-_118661898_118661971	0.0385326	SOX2.p2	NM_004397|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg19_v1_chr19_+_52873169_52873213	0.0385193	SOX2.p2	NM_001145434|ZNF880|400713|zinc finger protein 880	BC056265|ZNF880|400713|zinc finger protein 880	BC058819|ZNF880|400713|zinc finger protein 880	AK297834|ZNF880|400713|zinc finger protein 880	BC013198|ZNF880|400713|zinc finger protein 880	AF088022|ZNF880|400713|zinc finger protein 880
hg19_v1_chr22_+_30792929_30793101	0.0384988	SOX2.p2	NM_001204204|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	NM_012429|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	NM_033382|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AL096881|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AK223587|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	BC048337|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AK314390|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AK091402|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	BC058915|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AB033012|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	CR456571|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AK303751|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	AK296540|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	CU013170|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)	CU013458|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)
hg19_v1_chr11_-_62472901_62472984	0.0384976	SOX2.p2	
hg19_v1_chr1_-_78444772_78444778	0.0384678	SOX2.p2	NM_003902|FUBP1|8880|far upstream element (FUSE) binding protein 1
hg19_v1_chr17_-_5372235_5372379	0.038449	SOX2.p2	BC050409|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33	AK314580|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33	AK295760|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33	NM_001199699|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33	NM_020162|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33
hg19_v1_chr19_+_11708234_11708349	0.0384246	SOX2.p2	NM_145295|ZNF627|199692|zinc finger protein 627	BC098416|ZNF627|199692|zinc finger protein 627	AK095639|ZNF627|199692|zinc finger protein 627	BC006279|ZNF627|199692|zinc finger protein 627	AK074846|ZNF627|199692|zinc finger protein 627	BC069232|ZNF627|199692|zinc finger protein 627
hg19_v1_chr10_-_93669184_93669257	0.0383666	SOX2.p2	AK315427|FGFBP3|143282|fibroblast growth factor binding protein 3	BC025966|FGFBP3|143282|fibroblast growth factor binding protein 3	AK075410|FGFBP3|143282|fibroblast growth factor binding protein 3	NM_152429|FGFBP3|143282|fibroblast growth factor binding protein 3
hg19_v1_chr19_-_2740009_2740047	0.0383589	SOX2.p2	AK302600|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3	BC020571|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3	AK002044|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3
hg19_v1_chr3_-_160167600_160167647	0.0383508	SOX2.p2	BC109259|TRIM59|286827|tripartite motif containing 59	BC109260|TRIM59|286827|tripartite motif containing 59	AY159379|TRIM59|286827|tripartite motif containing 59	NM_173084|TRIM59|286827|tripartite motif containing 59
hg19_v1_chr6_+_123110345_123110490	0.0381667	SOX2.p2	AK000184|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	BC018999|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	BC066591|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	AK301365|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	DQ892207|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	DQ895402|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A
hg19_v1_chr6_-_42110714_42110714	0.0379487	SOX2.p2	NM_001164446|C6orf132|647024|chromosome 6 open reading frame 132
hg19_v1_chr11_+_44117098_44117251	0.0379342	SOX2.p2	NM_001178083|EXT2|2132|exostosin 2	NM_207122|EXT2|2132|exostosin 2	U62740|EXT2|2132|exostosin 2	AK312375|EXT2|2132|exostosin 2	BC010058|EXT2|2132|exostosin 2	AK296713|EXT2|2132|exostosin 2
hg19_v1_chr2_-_128615673_128615690	0.0377712	SOX2.p2	
hg19_v1_chrX_+_106045880_106046083	0.0377387	SOX2.p2	AK123957|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)	NM_017752|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)	NM_198881|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)	BC122564|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)	BX648230|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)	AB449890|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)	AB449891|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)
hg19_v1_chr4_+_113558611_113558725	0.0377259	SOX2.p2	NM_015454|LARP7|51574|La ribonucleoprotein domain family, member 7
hg19_v1_chr12_-_58146108_58146108	0.0377187	SOX2.p2	AK297901|CDK4|1019|cyclin-dependent kinase 4
hg19_v1_chr4_+_6717841_6717896	0.037703	SOX2.p2	AK002092|CNO|55330|cappuccino homolog (mouse)	NM_018366|CNO|55330|cappuccino homolog (mouse)
hg19_v1_chr7_-_150020661_150020757	0.0374824	SOX2.p2	BX640643|ACTR3C|653857|ARP3 actin-related protein 3 homolog C (yeast)	NM_001164458|ACTR3C|653857|ARP3 actin-related protein 3 homolog C (yeast)
hg19_v1_chr17_-_38859976_38860001	0.0374321	SOX2.p2	BC111964|KRT24|192666|keratin 24	BC111968|KRT24|192666|keratin 24	AK000268|KRT24|192666|keratin 24	NM_019016|KRT24|192666|keratin 24
hg19_v1_chr15_+_38746303_38746387	0.0374006	SOX2.p2	NM_001042429|FAM98B|283742|family with sequence similarity 98, member B	NM_173611|FAM98B|283742|family with sequence similarity 98, member B	AK095745|FAM98B|283742|family with sequence similarity 98, member B	BC093898|FAM98B|283742|family with sequence similarity 98, member B
hg19_v1_chr19_+_18530211_18530240	0.0373765	SOX2.p2	BC000274|SSBP4|170463|single stranded DNA binding protein 4	AK098429|SSBP4|170463|single stranded DNA binding protein 4
hg19_v1_chr6_+_44355440_44355560	0.0373731	SOX2.p2	AK128737|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)	AK299738|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)	BC001568|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)	AB007892|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)	DQ891623|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)	DQ894814|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)	U86753|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)
hg19_v1_chr2_+_70314781_70314874	0.0373727	SOX2.p2	Z29505|PCBP1|5093|poly(rC) binding protein 1	X78137|PCBP1|5093|poly(rC) binding protein 1
hg19_v1_chr5_-_150284293_150284373	0.0373634	SOX2.p2	BC117248|ZNF300|91975|zinc finger protein 300	BC032607|ZNF300|91975|zinc finger protein 300	DQ908918|ZNF300|91975|zinc finger protein 300
hg19_v1_chr3_+_179280686_179280733	0.0373553	SOX2.p2	AB060168|ACTL6A|86|actin-like 6A	NM_004301|ACTL6A|86|actin-like 6A	NM_177989|ACTL6A|86|actin-like 6A	NM_178042|ACTL6A|86|actin-like 6A	AK098691|ACTL6A|86|actin-like 6A	BC000949|ACTL6A|86|actin-like 6A	AL136608|ACTL6A|86|actin-like 6A	BC036371|ACTL6A|86|actin-like 6A
hg19_v1_chr1_-_202830630_202830735	0.037338	SOX2.p2	
hg19_v1_chr12_-_56753916_56754036	0.0373232	SOX2.p2	AK316516|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	AK295052|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	AK295114|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	NM_005419|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	NM_198332|STAT2|6773|signal transducer and activator of transcription 2, 113kDa
hg19_v1_chr7_+_129008044_129008133	0.0373214	SOX2.p2	AK025372|AHCYL2|23382|adenosylhomocysteinase-like 2
hg19_v1_chr16_+_89989686_89989830	0.0372958	SOX2.p2	NM_006086|TUBB3|10381|tubulin, beta 3 class III	AK314616|TUBB3|10381|tubulin, beta 3 class III	AK058140|TUBB3|10381|tubulin, beta 3 class III	AK223039|TUBB3|10381|tubulin, beta 3 class III	AK307201|TUBB3|10381|tubulin, beta 3 class III	BC000748|TUBB3|10381|tubulin, beta 3 class III	BC003021|TUBB3|10381|tubulin, beta 3 class III	BC064975|TUBB3|10381|tubulin, beta 3 class III	AF427491|TUBB3|10381|tubulin, beta 3 class III	U47634|TUBB3|10381|tubulin, beta 3 class III	S62643|TUBB3|10381|tubulin, beta 3 class III
hg19_v1_chrX_-_100914816_100914862	0.0372331	SOX2.p2	BC052628|ARMCX2|9823|armadillo repeat containing, X-linked 2	AB011084|ARMCX2|9823|armadillo repeat containing, X-linked 2	BC012541|ARMCX2|9823|armadillo repeat containing, X-linked 2	BX648494|ARMCX2|9823|armadillo repeat containing, X-linked 2	AK291342|ARMCX2|9823|armadillo repeat containing, X-linked 2	NM_014782|ARMCX2|9823|armadillo repeat containing, X-linked 2	NM_177949|ARMCX2|9823|armadillo repeat containing, X-linked 2
hg19_v1_chr16_-_47005339_47005358	0.0371644	SOX2.p2	Y13350|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2
hg19_v1_chr8_+_146277789_146277826	0.0370433	SOX2.p2	NM_023080|C8orf33|65265|chromosome 8 open reading frame 33	AK024642|C8orf33|65265|chromosome 8 open reading frame 33
hg19_v1_chr16_+_2563993_2563999	0.0369909	SOX2.p2	BC007759|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg19_v1_chr19_-_12595625_12595632	0.0367995	SOX2.p2	NM_152601|ZNF709|163051|zinc finger protein 709
hg19_v1_chr1_-_226496838_226496954	0.036762	SOX2.p2	AY786184|LIN9|286826|lin-9 homolog (C. elegans)	BC043444|LIN9|286826|lin-9 homolog (C. elegans)	BX537869|LIN9|286826|lin-9 homolog (C. elegans)	AK126177|LIN9|286826|lin-9 homolog (C. elegans)	AF190323|LIN9|286826|lin-9 homolog (C. elegans)	AF190324|LIN9|286826|lin-9 homolog (C. elegans)	AK308823|LIN9|286826|lin-9 homolog (C. elegans)
hg19_v1_chr6_-_84140758_84140825	0.036729	SOX2.p2	AK223417|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	AK301875|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	AK289783|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	AK302777|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic
hg19_v1_chr1_-_26232643_26232643	0.0367139	SOX2.p2	NM_203401|STMN1|3925|stathmin 1
hg19_v1_chr1_+_19972259_19972259	0.0366319	SOX2.p2	AK309257|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1	NM_001204086|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1
hg19_v1_chr13_-_95131718_95131935	0.036577	SOX2.p2	AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)
hg19_v1_chr15_+_45879575_45879640	0.036557	SOX2.p2	AK057545|PLDN|26258|pallidin homolog (mouse)	BC004819|PLDN|26258|pallidin homolog (mouse)	AK315581|PLDN|26258|pallidin homolog (mouse)
hg19_v1_chr6_-_47254143_47254220	0.0364727	SOX2.p2	AJ420531|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr8_-_124553448_124553514	0.0364531	SOX2.p2	NM_001242463|FBXO32|114907|F-box protein 32	NM_058229|FBXO32|114907|F-box protein 32
hg19_v1_chr22_+_20105145_20105170	0.0363971	SOX2.p2	CU013156|RANBP1|5902|RAN binding protein 1	CU013444|RANBP1|5902|RAN binding protein 1
hg19_v1_chr4_-_83295136_83295171	0.0363856	SOX2.p2	AK300149|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	AK292707|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	AK303552|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	NM_001003810|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	NM_002138|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	NM_031369|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	NM_031370|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)
hg19_v1_chr9_+_15422630_15422786	0.0363791	SOX2.p2	BC036031|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	NM_001039697|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa
hg19_v1_chr14_-_59951125_59951130	0.0363689	SOX2.p2	
hg19_v1_chr5_-_134734796_134734833	0.036362	SOX2.p2	AF041483|H2AFY|9555|H2A histone family, member Y
hg19_v1_chr7_+_100728719_100728802	0.0362972	SOX2.p2	BC005847|TRIM56|81844|tripartite motif containing 56	BC048194|TRIM56|81844|tripartite motif containing 56	NM_030961|TRIM56|81844|tripartite motif containing 56	BC011882|TRIM56|81844|tripartite motif containing 56
hg19_v1_chr3_-_58563070_58563149	0.0362719	SOX2.p2	AB023811|FAM107A|11170|family with sequence similarity 107, member A	BC010561|FAM107A|11170|family with sequence similarity 107, member A	AL050264|FAM107A|11170|family with sequence similarity 107, member A	AK055443|FAM107A|11170|family with sequence similarity 107, member A	AK128791|FAM107A|11170|family with sequence similarity 107, member A	BC093012|FAM107A|11170|family with sequence similarity 107, member A
hg19_v1_chr2_+_36583369_36583435	0.0362461	SOX2.p2	AB209139|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)	NM_016441|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)	AF167706|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)	BC111989|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)	BC113371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)
hg19_v1_chr16_+_1728290_1728323	0.0361884	SOX2.p2	BC014438|HN1L|90861|hematological and neurological expressed 1-like	AK296888|HN1L|90861|hematological and neurological expressed 1-like	AK303927|HN1L|90861|hematological and neurological expressed 1-like	AY598330|HN1L|90861|hematological and neurological expressed 1-like	AK309930|HN1L|90861|hematological and neurological expressed 1-like
hg19_v1_chr8_+_29952921_29952965	0.036182	SOX2.p2	NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1
hg19_v1_chr6_-_137540544_137540546	0.0361238	SOX2.p2	BC005333|IFNGR1|3459|interferon gamma receptor 1
hg19_v1_chr4_+_140587086_140587182	0.0360899	SOX2.p2	AK307231|MGST2|4258|microsomal glutathione S-transferase 2	U77604|MGST2|4258|microsomal glutathione S-transferase 2	CR407640|MGST2|4258|microsomal glutathione S-transferase 2	DQ893384|MGST2|4258|microsomal glutathione S-transferase 2	DQ896704|MGST2|4258|microsomal glutathione S-transferase 2
hg19_v1_chr19_-_41812991_41813133	0.0360748	SOX2.p2	
hg19_v1_chr15_+_78730477_78730566	0.0360531	SOX2.p2	NM_004136|IREB2|3658|iron-responsive element binding protein 2
hg19_v1_chr14_-_54955714_54955796	0.0359523	SOX2.p2	AB001106|GMFB|2764|glia maturation factor, beta	BX647679|GMFB|2764|glia maturation factor, beta	NM_004124|GMFB|2764|glia maturation factor, beta
hg19_v1_chr9_-_35828728_35828743	0.0359462	SOX2.p2	BC146808|C9orf128|392307|chromosome 9 open reading frame 128	BX648702|C9orf128|392307|chromosome 9 open reading frame 128	NM_001012446|C9orf128|392307|chromosome 9 open reading frame 128
hg19_v1_chr17_+_61678277_61678442	0.0359288	SOX2.p2	BC007744|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I
hg19_v1_chr1_+_182808481_182808540	0.035813	SOX2.p2	AK308165|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC137136|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC144494|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC014246|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	AF086352|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC025245|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC008773|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	L13848|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9
hg19_v1_chr19_-_12595547_12595605	0.0355261	SOX2.p2	BC136746|ZNF709|163051|zinc finger protein 709	BC136751|ZNF709|163051|zinc finger protein 709	AK290911|ZNF709|163051|zinc finger protein 709	BC036481|ZNF709|163051|zinc finger protein 709
hg19_v1_chr4_-_48014960_48014960	0.0355084	SOX2.p2	AK292021|CNGA1|1259|cyclic nucleotide gated channel alpha 1	NM_000087|CNGA1|1259|cyclic nucleotide gated channel alpha 1
hg19_v1_chr6_-_38670904_38670912	0.0354837	SOX2.p2	BC011365|GLO1|2739|glyoxalase I
hg19_v1_chr3_+_182971213_182971343	0.0354645	SOX2.p2	AB209517|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg19_v1_chr7_-_156802553_156802679	0.0354495	SOX2.p2	X56537|MNX1|3110|motor neuron and pancreas homeobox 1
hg19_v1_chr5_+_140810126_140810168	0.0353066	SOX2.p2	NM_003735|PCDHGA12|26025|protocadherin gamma subfamily A, 12	NM_032094|PCDHGA12|26025|protocadherin gamma subfamily A, 12
hg19_v1_chr9_-_35072643_35072738	0.0353021	SOX2.p2	NM_007126|VCP|7415|valosin containing protein
hg19_v1_chr3_-_15540378_15540378	0.0352375	SOX2.p2	AK128401|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	NM_080538|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
hg19_v1_chr1_+_148558187_148558268	0.0351562	SOX2.p2	NM_001170755|NBPF15|284565|neuroblastoma breakpoint family, member 15	AK097180|NBPF15|284565|neuroblastoma breakpoint family, member 15
hg19_v1_chr22_-_18256748_18256812	0.0351355	SOX2.p2	AF250233|BID|637|BH3 interacting domain death agonist	AK094795|BID|637|BH3 interacting domain death agonist	BC036364|BID|637|BH3 interacting domain death agonist	NM_001244572|BID|637|BH3 interacting domain death agonist	NM_197966|BID|637|BH3 interacting domain death agonist
hg19_v1_chr17_+_56769953_56770049	0.0350555	SOX2.p2	AF029669|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	AK290487|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	BC073161|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	NM_002876|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	NM_058216|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	BC093930|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	BC101485|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	BC143259|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	BC000667|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	AF029670|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	BT007339|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	AK303363|RAD51C|5889|RAD51 homolog C (S. cerevisiae)
hg19_v1_chr22_-_18257238_18257430	0.035026	SOX2.p2	BC022072|BID|637|BH3 interacting domain death agonist	NM_001196|BID|637|BH3 interacting domain death agonist	NM_001244569|BID|637|BH3 interacting domain death agonist	NM_001244570|BID|637|BH3 interacting domain death agonist	NM_197967|BID|637|BH3 interacting domain death agonist	EU678293|BID|637|BH3 interacting domain death agonist	EU678294|BID|637|BH3 interacting domain death agonist	NM_001244567|BID|637|BH3 interacting domain death agonist
hg19_v1_chr6_+_134274247_134274443	0.0349947	SOX2.p2	NM_004865|TBPL1|9519|TBP-like 1	AK313645|TBPL1|9519|TBP-like 1	BC000381|TBPL1|9519|TBP-like 1	AF136570|TBPL1|9519|TBP-like 1	AF130312|TBPL1|9519|TBP-like 1	AB020881|TBPL1|9519|TBP-like 1	BC017559|TBPL1|9519|TBP-like 1
hg19_v1_chr15_-_49255640_49255640	0.0349749	SOX2.p2	BC033907|SHC4|399694|SHC (Src homology 2 domain containing) family, member 4	NM_203349|SHC4|399694|SHC (Src homology 2 domain containing) family, member 4
hg19_v1_chr2_+_219264719_219264843	0.0349638	SOX2.p2	BC012977|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	EU446878|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	AY279529|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
hg19_v1_chr10_+_35464514_35464549	0.0349363	SOX2.p2	NM_182769|CREM|1390|cAMP responsive element modulator	NM_182770|CREM|1390|cAMP responsive element modulator	AF417233|CREM|1390|cAMP responsive element modulator	AY292864|CREM|1390|cAMP responsive element modulator	BC090051|CREM|1390|cAMP responsive element modulator	AK301906|CREM|1390|cAMP responsive element modulator
hg19_v1_chr15_+_40886217_40886233	0.0346619	SOX2.p2	AF173994|CASC5|57082|cancer susceptibility candidate 5	BC043597|CASC5|57082|cancer susceptibility candidate 5
hg19_v1_chr7_+_2598676_2598703	0.0346322	SOX2.p2	AK309646|IQCE|23288|IQ motif containing E	BC043150|IQCE|23288|IQ motif containing E
hg19_v1_chr3_-_126373957_126373996	0.0344688	SOX2.p2	NM_001173513|TXNRD3|114112|thioredoxin reductase 3	NM_052883|TXNRD3|114112|thioredoxin reductase 3
hg19_v1_chr11_-_3013550_3013560	0.0343416	SOX2.p2	AK316324|NAP1L4|4676|nucleosome assembly protein 1-like 4
hg19_v1_chr13_+_32420828_32420977	0.0342199	SOX2.p2	BC021729|EEF1DP3|196549|eukaryotic translation elongation factor 1 delta pseudogene 3
hg19_v1_chr16_+_67143927_67144078	0.0342092	SOX2.p2	
hg19_v1_chr9_-_35072596_35072636	0.0341103	SOX2.p2	BC096751|VCP|7415|valosin containing protein	AK312310|VCP|7415|valosin containing protein	BC012195|VCP|7415|valosin containing protein	BC017171|VCP|7415|valosin containing protein
hg19_v1_chr22_+_21271940_21272066	0.0340136	SOX2.p2	CR456423|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
hg19_v1_chr3_-_195310985_195311075	0.0339896	SOX2.p2	NM_001647|APOD|347|apolipoprotein D
hg19_v1_chr6_-_32119667_32119699	0.0339735	SOX2.p2	BC063046|PRRT1|80863|proline-rich transmembrane protein 1	AK123424|PRRT1|80863|proline-rich transmembrane protein 1
hg19_v1_chr9_-_14868974_14869024	0.0339139	SOX2.p2	AB160987|FREM1|158326|FRAS1 related extracellular matrix 1
hg19_v1_chr6_+_123109970_123109970	0.0338877	SOX2.p2	NM_006714|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A
hg19_v1_chr2_+_231729501_231729620	0.0337616	SOX2.p2	NM_001012514|ITM2C|81618|integral membrane protein 2C	NM_001012516|ITM2C|81618|integral membrane protein 2C	NM_030926|ITM2C|81618|integral membrane protein 2C
hg19_v1_chr12_+_117348710_117348862	0.0337432	SOX2.p2	BC037296|FBXW8|26259|F-box and WD repeat domain containing 8	NM_012174|FBXW8|26259|F-box and WD repeat domain containing 8	NM_153348|FBXW8|26259|F-box and WD repeat domain containing 8	AK289621|FBXW8|26259|F-box and WD repeat domain containing 8	AF176707|FBXW8|26259|F-box and WD repeat domain containing 8
hg19_v1_chr16_+_57702156_57702259	0.0337201	SOX2.p2	AK172801|GPR97|222487|G protein-coupled receptor 97	NM_170776|GPR97|222487|G protein-coupled receptor 97	BC064508|GPR97|222487|G protein-coupled receptor 97	AB049169|GPR97|222487|G protein-coupled receptor 97	AK310124|GPR97|222487|G protein-coupled receptor 97	AK301258|GPR97|222487|G protein-coupled receptor 97	BC044222|GPR97|222487|G protein-coupled receptor 97	AY140959|GPR97|222487|G protein-coupled receptor 97
hg19_v1_chr19_+_11466061_11466170	0.0336184	SOX2.p2	NM_001170635|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	NM_022737|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	AK023117|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	AY304516|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	AK225482|LPPR2|64748|lipid phosphate phosphatase-related protein type 2
hg19_v1_chr17_-_3500335_3500391	0.0335376	SOX2.p2	AJ272063|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1	NM_018727|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1	AF196175|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1
hg19_v1_chr9_-_126030854_126030923	0.0334826	SOX2.p2	AL136866|STRBP|55342|spermatid perinuclear RNA binding protein	NM_001171137|STRBP|55342|spermatid perinuclear RNA binding protein	BC108731|STRBP|55342|spermatid perinuclear RNA binding protein	AK027890|STRBP|55342|spermatid perinuclear RNA binding protein
hg19_v1_chrX_-_128657381_128657436	0.0334692	SOX2.p2	BC117447|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	BC143954|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	BC143955|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	AK026426|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
hg19_v1_chr17_+_61627976_61628049	0.0334583	SOX2.p2	DQ891233|DCAF7|10238|DDB1 and CUL4 associated factor 7	DQ894417|DCAF7|10238|DDB1 and CUL4 associated factor 7
hg19_v1_chr6_-_38670922_38670953	0.0333812	SOX2.p2	NM_006708|GLO1|2739|glyoxalase I
hg19_v1_chr12_+_510740_510822	0.0333758	SOX2.p2	NM_001130146|CCDC77|84318|coiled-coil domain containing 77	NM_032358|CCDC77|84318|coiled-coil domain containing 77	AK293165|CCDC77|84318|coiled-coil domain containing 77	AK027638|CCDC77|84318|coiled-coil domain containing 77
hg19_v1_chr17_+_79981187_79981279	0.0333654	SOX2.p2	BC014109|LRRC45|201255|leucine rich repeat containing 45	NM_144999|LRRC45|201255|leucine rich repeat containing 45
hg19_v1_chr1_+_43148105_43148125	0.0333421	SOX2.p2	BC098435|YBX1|4904|Y box binding protein 1	Z70765|YBX1|4904|Y box binding protein 1	BC106045|YBX1|4904|Y box binding protein 1	J03827|YBX1|4904|Y box binding protein 1	BC065571|YBX1|4904|Y box binding protein 1	BC071708|YBX1|4904|Y box binding protein 1	BC072014|YBX1|4904|Y box binding protein 1	BC090038|YBX1|4904|Y box binding protein 1	BC038384|YBX1|4904|Y box binding protein 1	BC000064|YBX1|4904|Y box binding protein 1	BC010430|YBX1|4904|Y box binding protein 1	BC002411|YBX1|4904|Y box binding protein 1	M24070|YBX1|4904|Y box binding protein 1
hg19_v1_chr16_+_2563675_2563893	0.0332696	SOX2.p2	NM_001198569|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	M62762|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	NM_001694|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
hg19_v1_chr1_-_1624180_1624254	0.0332692	SOX2.p2	AB007916|SLC35E2B|728661|solute carrier family 35, member E2B	NM_001110781|SLC35E2B|728661|solute carrier family 35, member E2B
hg19_v1_chr11_-_27742224_27742325	0.0332222	SOX2.p2	AB038671|BDNF|627|brain-derived neurotrophic factor	AY054393|BDNF|627|brain-derived neurotrophic factor	AY054394|BDNF|627|brain-derived neurotrophic factor	AY054395|BDNF|627|brain-derived neurotrophic factor	EF674517|BDNF|627|brain-derived neurotrophic factor	EF674518|BDNF|627|brain-derived neurotrophic factor	EF674519|BDNF|627|brain-derived neurotrophic factor	NM_001143805|BDNF|627|brain-derived neurotrophic factor	NM_001143806|BDNF|627|brain-derived neurotrophic factor	NM_170732|BDNF|627|brain-derived neurotrophic factor
hg19_v1_chr2_-_159312955_159313264	0.0331306	SOX2.p2	BC105928|CCDC148|130940|coiled-coil domain containing 148	BC107596|CCDC148|130940|coiled-coil domain containing 148	BC107597|CCDC148|130940|coiled-coil domain containing 148	AK123220|CCDC148|130940|coiled-coil domain containing 148	AK058105|CCDC148|130940|coiled-coil domain containing 148	AF458588|CCDC148|130940|coiled-coil domain containing 148	BC015395|CCDC148|130940|coiled-coil domain containing 148	AK309246|CCDC148|130940|coiled-coil domain containing 148	AK308783|CCDC148|130940|coiled-coil domain containing 148	AK311042|CCDC148|130940|coiled-coil domain containing 148	NM_001171637|CCDC148|130940|coiled-coil domain containing 148	NM_138803|CCDC148|130940|coiled-coil domain containing 148
hg19_v1_chr15_-_28567249_28567294	0.0330707	SOX2.p2	AF071172|HERC2|8924|hect domain and RLD 2	BC015486|HERC2|8924|hect domain and RLD 2	BC142951|HERC2|8924|hect domain and RLD 2	BC045544|HERC2|8924|hect domain and RLD 2	NM_004667|HERC2|8924|hect domain and RLD 2
hg19_v1_chr2_-_128615706_128615745	0.0330514	SOX2.p2	BC093795|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D	NM_004805|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D	BC093797|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D
hg19_v1_chr3_+_10068097_10068121	0.0330039	SOX2.p2	AK307512|FANCD2|2177|Fanconi anemia, complementation group D2	NM_001018115|FANCD2|2177|Fanconi anemia, complementation group D2	NM_033084|FANCD2|2177|Fanconi anemia, complementation group D2
hg19_v1_chr3_-_10149763_10149914	0.0329906	SOX2.p2	AY248899|C3orf24|115795|chromosome 3 open reading frame 24	AF230334|C3orf24|115795|chromosome 3 open reading frame 24	BC028122|C3orf24|115795|chromosome 3 open reading frame 24	NM_001164839|C3orf24|115795|chromosome 3 open reading frame 24	NM_173472|C3orf24|115795|chromosome 3 open reading frame 24
hg19_v1_chr11_-_6704517_6704631	0.0329259	SOX2.p2	CR457177|MRPL17|63875|mitochondrial ribosomal protein L17	DQ891581|MRPL17|63875|mitochondrial ribosomal protein L17	DQ894774|MRPL17|63875|mitochondrial ribosomal protein L17	DQ895036|MRPL17|63875|mitochondrial ribosomal protein L17	BC012306|MRPL17|63875|mitochondrial ribosomal protein L17	AK026857|MRPL17|63875|mitochondrial ribosomal protein L17	AF164797|MRPL17|63875|mitochondrial ribosomal protein L17	AF141338|MRPL17|63875|mitochondrial ribosomal protein L17	NM_022061|MRPL17|63875|mitochondrial ribosomal protein L17
hg19_v1_chr4_+_699529_699731	0.0327628	SOX2.p2	AK225892|PCGF3|10336|polycomb group ring finger 3	NM_006315|PCGF3|10336|polycomb group ring finger 3	AK057124|PCGF3|10336|polycomb group ring finger 3	AK300290|PCGF3|10336|polycomb group ring finger 3	AK125801|PCGF3|10336|polycomb group ring finger 3
hg19_v1_chr12_+_72080136_72080318	0.0327097	SOX2.p2	AK001798|TMEM19|55266|transmembrane protein 19	AK223148|TMEM19|55266|transmembrane protein 19	AK315587|TMEM19|55266|transmembrane protein 19
hg19_v1_chr11_-_76091866_76092151	0.0327032	SOX2.p2	AF007393|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	AF081567|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	HQ258648|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	NM_004705|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	AK291843|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	BC117138|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	BC117140|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	BC110304|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)
hg19_v1_chr3_+_73110809_73110809	0.0326123	SOX2.p2	BC051316|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2	BC064501|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2	NM_018029|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2
hg19_v1_chr19_+_9473695_9473695	0.0326094	SOX2.p2	NM_003451|ZNF177|7730|zinc finger protein 177	U37263|ZNF177|7730|zinc finger protein 177
hg19_v1_chr6_+_126240369_126240477	0.03259	SOX2.p2	NM_001199622|NCOA7|135112|nuclear receptor coactivator 7	AK094706|NCOA7|135112|nuclear receptor coactivator 7
hg19_v1_chr15_+_40886442_40886486	0.0325725	SOX2.p2	AB022190|CASC5|57082|cancer susceptibility candidate 5	BC014306|CASC5|57082|cancer susceptibility candidate 5	NM_144508|CASC5|57082|cancer susceptibility candidate 5	NM_170589|CASC5|57082|cancer susceptibility candidate 5	AK307605|CASC5|57082|cancer susceptibility candidate 5	AK307996|CASC5|57082|cancer susceptibility candidate 5	AF248041|CASC5|57082|cancer susceptibility candidate 5	AF461041|CASC5|57082|cancer susceptibility candidate 5	BC029373|CASC5|57082|cancer susceptibility candidate 5
hg19_v1_chr2_+_238536183_238536535	0.0324376	SOX2.p2	NM_001137550|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1	AF115510|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1
hg19_v1_chr17_+_65821625_65821780	0.0323733	SOX2.p2	AK297281|BPTF|2186|bromodomain PHD finger transcription factor	BC037422|BPTF|2186|bromodomain PHD finger transcription factor	NM_004459|BPTF|2186|bromodomain PHD finger transcription factor	NM_182641|BPTF|2186|bromodomain PHD finger transcription factor	AB032251|BPTF|2186|bromodomain PHD finger transcription factor
hg19_v1_chr1_+_65730423_65730436	0.0322549	SOX2.p2	AK296408|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6	NM_014787|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6	AB007942|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6
hg19_v1_chr4_+_57774090_57774236	0.0320173	SOX2.p2	BC038985|REST|5978|RE1-silencing transcription factor	U13879|REST|5978|RE1-silencing transcription factor
hg19_v1_chr15_-_65282227_65282265	0.0319363	SOX2.p2	AK301362|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	NM_001127890|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	NM_016630|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg19_v1_chrX_-_128788913_128788932	0.0317496	SOX2.p2	BC021104|APLN|8862|apelin	NM_017413|APLN|8862|apelin
hg19_v1_chr10_-_28571014_28571066	0.0317432	SOX2.p2	BC038105|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)	AK057360|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)	NM_173496|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
hg19_v1_chr2_+_208576365_208576425	0.0316565	SOX2.p2	BC047293|CCNYL1|151195|cyclin Y-like 1
hg19_v1_chr3_+_43328001_43328137	0.0316473	SOX2.p2	AK291360|SNRK|54861|SNF related kinase	NM_001100594|SNRK|54861|SNF related kinase	NM_017719|SNRK|54861|SNF related kinase	BC071567|SNRK|54861|SNF related kinase	AK295187|SNRK|54861|SNF related kinase	CR749621|SNRK|54861|SNF related kinase	AK314376|SNRK|54861|SNF related kinase
hg19_v1_chr15_+_63796793_63796962	0.0316344	SOX2.p2	AK301236|USP3|9960|ubiquitin specific peptidase 3	BC065300|USP3|9960|ubiquitin specific peptidase 3	NM_006537|USP3|9960|ubiquitin specific peptidase 3	AY461579|USP3|9960|ubiquitin specific peptidase 3	BC100029|USP3|9960|ubiquitin specific peptidase 3	AF073344|USP3|9960|ubiquitin specific peptidase 3	BC107137|USP3|9960|ubiquitin specific peptidase 3	BC107138|USP3|9960|ubiquitin specific peptidase 3	AK300948|USP3|9960|ubiquitin specific peptidase 3	AK301563|USP3|9960|ubiquitin specific peptidase 3	BC018113|USP3|9960|ubiquitin specific peptidase 3	BX647760|USP3|9960|ubiquitin specific peptidase 3	DQ891025|USP3|9960|ubiquitin specific peptidase 3	DQ894205|USP3|9960|ubiquitin specific peptidase 3	BT007269|USP3|9960|ubiquitin specific peptidase 3	AK307810|USP3|9960|ubiquitin specific peptidase 3
hg19_v1_chr9_+_35829208_35829279	0.0315599	SOX2.p2	NM_016446|TMEM8B|51754|transmembrane protein 8B	BC043384|TMEM8B|51754|transmembrane protein 8B	NM_001042589|TMEM8B|51754|transmembrane protein 8B	AF188239|TMEM8B|51754|transmembrane protein 8B
hg19_v1_chr19_+_3572903_3572949	0.0315064	SOX2.p2	NM_006339|HMG20B|10362|high mobility group 20B
hg19_v1_chr9_-_132586363_132586397	0.0314098	SOX2.p2	BT006931|TOR1A|1861|torsin family 1, member A (torsin A)	DQ892657|TOR1A|1861|torsin family 1, member A (torsin A)	DQ895897|TOR1A|1861|torsin family 1, member A (torsin A)	BC014484|TOR1A|1861|torsin family 1, member A (torsin A)	AK314505|TOR1A|1861|torsin family 1, member A (torsin A)	AK075343|TOR1A|1861|torsin family 1, member A (torsin A)
hg19_v1_chr13_-_61989654_61989654	0.0314047	SOX2.p2	AK289924|PCDH20|64881|protocadherin 20	NM_022843|PCDH20|64881|protocadherin 20
hg19_v1_chr6_+_142468401_142468411	0.0313908	SOX2.p2	AL136684|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AK130738|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AF060225|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AF271994|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AK000051|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	NM_016485|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)
hg19_v1_chr14_+_74035865_74036130	0.0313517	SOX2.p2	DQ893488|ACOT2|10965|acyl-CoA thioesterase 2	DQ896406|ACOT2|10965|acyl-CoA thioesterase 2	BC004436|ACOT2|10965|acyl-CoA thioesterase 2	BC006500|ACOT2|10965|acyl-CoA thioesterase 2	L40401|ACOT2|10965|acyl-CoA thioesterase 2	AY005822|ACOT2|10965|acyl-CoA thioesterase 2
hg19_v1_chr16_-_12010518_12010518	0.0313351	SOX2.p2	NM_001130007|GSPT1|2935|G1 to S phase transition 1
hg19_v1_chrX_+_70503534_70503553	0.0313267	SOX2.p2	U02493|NONO|4841|non-POU domain containing, octamer-binding	U89867|NONO|4841|non-POU domain containing, octamer-binding
hg19_v1_chr7_+_150688143_150688191	0.0312993	SOX2.p2	NM_000603|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	BC063294|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK300390|NOS3|4846|nitric oxide synthase 3 (endothelial cell)
hg19_v1_chr10_-_43892160_43892278	0.0312982	SOX2.p2	NM_001098208|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F
hg19_v1_chr1_-_1510260_1510284	0.0312419	SOX2.p2	NM_014188|SSU72|29101|SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae)
hg19_v1_chr17_+_42264300_42264417	0.0312132	SOX2.p2	AK294198|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	AK096631|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	NM_001076674|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	NM_024107|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	AY358780|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	BC063489|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	BC004306|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2
hg19_v1_chr12_+_6898699_6898703	0.0311841	SOX2.p2	AK310652|CD4|920|CD4 molecule	AK310750|CD4|920|CD4 molecule	AK311495|CD4|920|CD4 molecule	AK315898|CD4|920|CD4 molecule	AK312828|CD4|920|CD4 molecule	AK316462|CD4|920|CD4 molecule	AK310687|CD4|920|CD4 molecule
hg19_v1_chr2_+_18059923_18059986	0.0311732	SOX2.p2	AK314451|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3	BC015947|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3	NM_002252|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3	BC004148|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3	BC004987|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3
hg19_v1_chr10_-_61666236_61666413	0.031154	SOX2.p2	BC064391|CCDC6|8030|coiled-coil domain containing 6	BC036757|CCDC6|8030|coiled-coil domain containing 6	BC022284|CCDC6|8030|coiled-coil domain containing 6	AK292593|CCDC6|8030|coiled-coil domain containing 6	NM_005436|CCDC6|8030|coiled-coil domain containing 6
hg19_v1_chr22_+_39052671_39052721	0.031148	SOX2.p2	AL136686|CBY1|25776|chibby homolog 1 (Drosophila)	AL050345|CBY1|25776|chibby homolog 1 (Drosophila)	BC016139|CBY1|25776|chibby homolog 1 (Drosophila)	AF331041|CBY1|25776|chibby homolog 1 (Drosophila)
hg19_v1_chr3_-_112564789_112564796	0.0310647	SOX2.p2	BC144504|CD200R1L|344807|CD200 receptor 1-like	BC144507|CD200R1L|344807|CD200 receptor 1-like	AY284976|CD200R1L|344807|CD200 receptor 1-like	AY552790|CD200R1L|344807|CD200 receptor 1-like	NM_001008784|CD200R1L|344807|CD200 receptor 1-like	NM_001199215|CD200R1L|344807|CD200 receptor 1-like
hg19_v1_chr12_+_12869818_12870435	0.0310343	SOX2.p2	AK312461|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)	NM_004064|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)	BC001971|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)	AK298335|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)
hg19_v1_chr3_+_127771307_127771337	0.0309792	SOX2.p2	AF346602|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)
hg19_v1_chr12_+_112890999_112891140	0.0308741	SOX2.p2	EU779706|PTPN11|5781|protein tyrosine phosphatase, non-receptor type 11
hg19_v1_chr15_-_65281771_65281847	0.0308738	SOX2.p2	AF212231|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	NM_001127889|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg19_v1_chr20_-_34542385_34542547	0.0307579	SOX2.p2	AF204271|SCAND1|51282|SCAN domain containing 1	BC000785|SCAND1|51282|SCAN domain containing 1	AF207829|SCAND1|51282|SCAN domain containing 1	NM_033630|SCAND1|51282|SCAN domain containing 1
hg19_v1_chr17_+_35767311_35767311	0.0307236	SOX2.p2	AK022767|TADA2A|6871|transcriptional adaptor 2A	NM_001488|TADA2A|6871|transcriptional adaptor 2A	NM_133439|TADA2A|6871|transcriptional adaptor 2A
hg19_v1_chr4_+_6717899_6717945	0.0306774	SOX2.p2	BC067815|CNO|55330|cappuccino homolog (mouse)	BC001818|CNO|55330|cappuccino homolog (mouse)	BC009890|CNO|55330|cappuccino homolog (mouse)
hg19_v1_chr14_+_52456192_52456317	0.0306686	SOX2.p2	AF087877|C14orf166|51637|chromosome 14 open reading frame 166	AF100755|C14orf166|51637|chromosome 14 open reading frame 166	AF151857|C14orf166|51637|chromosome 14 open reading frame 166	DQ525179|C14orf166|51637|chromosome 14 open reading frame 166	NM_016039|C14orf166|51637|chromosome 14 open reading frame 166	AK312004|C14orf166|51637|chromosome 14 open reading frame 166	BC001722|C14orf166|51637|chromosome 14 open reading frame 166
hg19_v1_chr6_-_42713837_42713914	0.0306641	SOX2.p2	NM_003192|TBCC|6903|tubulin folding cofactor C
hg19_v1_chr14_+_65878579_65878661	0.0306274	SOX2.p2	BC142958|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AK292413|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AK294242|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	Y17976|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	Y17977|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)
hg19_v1_chr9_-_36400212_36400295	0.030588	SOX2.p2	AL136817|RNF38|152006|ring finger protein 38	BC033786|RNF38|152006|ring finger protein 38	NM_022781|RNF38|152006|ring finger protein 38	NM_194329|RNF38|152006|ring finger protein 38
hg19_v1_chr12_+_69202796_69202806	0.0305384	SOX2.p2	EU076746|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)	EU076747|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)	EU076748|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)	EU076749|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)
hg19_v1_chr18_+_77794345_77794588	0.0304144	SOX2.p2	AK307212|RBFA|79863|ribosome binding factor A (putative)	NM_001171967|RBFA|79863|ribosome binding factor A (putative)	NM_024805|RBFA|79863|ribosome binding factor A (putative)	AK024825|RBFA|79863|ribosome binding factor A (putative)	AK311463|RBFA|79863|ribosome binding factor A (putative)	AK311239|RBFA|79863|ribosome binding factor A (putative)	AF261073|RBFA|79863|ribosome binding factor A (putative)	AF439745|RBFA|79863|ribosome binding factor A (putative)	BC057772|RBFA|79863|ribosome binding factor A (putative)	BC014195|RBFA|79863|ribosome binding factor A (putative)
hg19_v1_chr3_-_126373873_126373956	0.0304139	SOX2.p2	AK299502|TXNRD3|114112|thioredoxin reductase 3	BC030028|TXNRD3|114112|thioredoxin reductase 3	BC050032|TXNRD3|114112|thioredoxin reductase 3
hg19_v1_chr1_+_231664398_231664465	0.0303056	SOX2.p2	FJ804217|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough	FJ804218|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough	FJ804219|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough	FJ804220|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough	FJ804221|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough	FJ804222|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough	FJ804223|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough	FJ804224|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough	NM_005999|TSNAX|7257|translin-associated factor X	X95073|TSNAX|7257|translin-associated factor X	BC011797|TSNAX|7257|translin-associated factor X	BC010376|TSNAX|7257|translin-associated factor X	AK313068|TSNAX|7257|translin-associated factor X
hg19_v1_chr1_-_115300615_115300670	0.0302812	SOX2.p2	NM_001007553|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_001130523|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_001242891|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_001242892|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_001242893|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_007158|CSDE1|7812|cold shock domain containing E1, RNA-binding
hg19_v1_chr20_-_61569227_61569257	0.0302686	SOX2.p2	BC004237|DIDO1|11083|death inducer-obliterator 1	AB002331|DIDO1|11083|death inducer-obliterator 1	AK002127|DIDO1|11083|death inducer-obliterator 1
hg19_v1_chr15_-_52043649_52043781	0.0302636	SOX2.p2	NM_001143917|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2	BC022075|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2
hg19_v1_chr4_-_105416050_105416057	0.0302518	SOX2.p2	AK127778|CXXC4|80319|CXXC finger protein 4
hg19_v1_chr11_+_64889699_64889801	0.0302257	SOX2.p2	NM_004927|MRPL49|740|mitochondrial ribosomal protein L49	AK129986|MRPL49|740|mitochondrial ribosomal protein L49	AK311821|MRPL49|740|mitochondrial ribosomal protein L49	AK129795|MRPL49|740|mitochondrial ribosomal protein L49
hg19_v1_chr15_-_99791399_99791434	0.0302123	SOX2.p2	AK023230|TTC23|64927|tetratricopeptide repeat domain 23	AK291690|TTC23|64927|tetratricopeptide repeat domain 23
hg19_v1_chr22_-_20104428_20104538	0.0300962	SOX2.p2	BC013352|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	BC108251|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	CR456354|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)
hg19_v1_chr22_-_18257221_18257225	0.0300776	SOX2.p2	BC009197|BID|637|BH3 interacting domain death agonist	AF087891|BID|637|BH3 interacting domain death agonist	AF042083|BID|637|BH3 interacting domain death agonist
hg19_v1_chr20_-_45035253_45035346	0.0300103	SOX2.p2	AK299318|ELMO2|63916|engulfment and cell motility 2	AL833406|ELMO2|63916|engulfment and cell motility 2	BX648819|ELMO2|63916|engulfment and cell motility 2	NM_133171|ELMO2|63916|engulfment and cell motility 2	NM_182764|ELMO2|63916|engulfment and cell motility 2
hg19_v1_chr9_-_129870311_129870393	0.0299838	SOX2.p2	AK075026|ANGPTL2|23452|angiopoietin-like 2
hg19_v1_chr7_+_74379079_74379082	0.0299154	SOX2.p2	BC147030|GATSL2|729438|GATS protein-like 2	BC147031|GATSL2|729438|GATS protein-like 2	NM_001145063|GATSL1|389523|GATS protein-like 1
hg19_v1_chrX_+_77166223_77166262	0.0298079	SOX2.p2	AB117973|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide	AB208828|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide
hg19_v1_chr22_-_18257194_18257220	0.0296724	SOX2.p2	AK313729|BID|637|BH3 interacting domain death agonist	BC033634|BID|637|BH3 interacting domain death agonist
hg19_v1_chr2_+_17935379_17935443	0.0295508	SOX2.p2	CR936783|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)	NM_001130009|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)	AK093631|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)
hg19_v1_chr12_+_54674531_54674593	0.0294096	SOX2.p2	AK129814|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	AK303303|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	AK308679|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC070315|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC108266|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2	AK291113|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC071945|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC078165|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC073162|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC121133|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC074502|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC002355|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC033714|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC052296|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC020442|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC103707|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	X79536|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC012158|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	U00947|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1
hg19_v1_chr6_-_136847743_136847851	0.029398	SOX2.p2	AK296483|MAP7|9053|microtubule-associated protein 7	AK311270|MAP7|9053|microtubule-associated protein 7	NM_001198614|MAP7|9053|microtubule-associated protein 7	NM_001198618|MAP7|9053|microtubule-associated protein 7	AK311114|MAP7|9053|microtubule-associated protein 7	AK311236|MAP7|9053|microtubule-associated protein 7	AK316062|MAP7|9053|microtubule-associated protein 7	NM_001198619|MAP7|9053|microtubule-associated protein 7	AK311234|MAP7|9053|microtubule-associated protein 7
hg19_v1_chr3_+_184033936_184033978	0.0293883	SOX2.p2	AF002816|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF104913|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AK294567|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg19_v1_chr1_-_200377488_200377589	0.0292712	SOX2.p2	AK022921|ZNF281|23528|zinc finger protein 281
hg19_v1_chr1_-_23694497_23694900	0.0292658	SOX2.p2	EU446536|ZNF436|80818|zinc finger protein 436	AK308173|ZNF436|80818|zinc finger protein 436	BC056400|ZNF436|80818|zinc finger protein 436	AK092364|ZNF436|80818|zinc finger protein 436	AL834485|ZNF436|80818|zinc finger protein 436	NM_030634|ZNF436|80818|zinc finger protein 436
hg19_v1_chr19_-_6767417_6767598	0.0292556	SOX2.p2	AK225386|SH2D3A|10045|SH2 domain containing 3A	AK292781|SH2D3A|10045|SH2 domain containing 3A	AK299406|SH2D3A|10045|SH2 domain containing 3A	AK310659|SH2D3A|10045|SH2 domain containing 3A	BC006281|SH2D3A|10045|SH2 domain containing 3A	AF124249|SH2D3A|10045|SH2 domain containing 3A	AY358406|SH2D3A|10045|SH2 domain containing 3A	NM_005490|SH2D3A|10045|SH2 domain containing 3A	AK290293|SH2D3A|10045|SH2 domain containing 3A
hg19_v1_chr12_-_102874340_102874344	0.0291856	SOX2.p2	M11568|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg19_v1_chr11_+_34073188_34073238	0.029174	SOX2.p2	BC001731|CAPRIN1|4076|cell cycle associated protein 1	NM_005898|CAPRIN1|4076|cell cycle associated protein 1	NM_203364|CAPRIN1|4076|cell cycle associated protein 1
hg19_v1_chr7_+_44836273_44836301	0.0290951	SOX2.p2	AK290851|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC005982|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK130101|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK293003|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC007104|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC013915|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK026569|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK297340|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK316564|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC093076|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK290085|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC005320|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	D28351|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC106030|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC073992|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC003026|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC000689|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)
hg19_v1_chr4_+_113558119_113558119	0.0290629	SOX2.p2	NM_016648|LARP7|51574|La ribonucleoprotein domain family, member 7
hg19_v1_chr2_+_85980600_85981411	0.0289029	SOX2.p2	NM_032827|ATOH8|84913|atonal homolog 8 (Drosophila)	AK074681|ATOH8|84913|atonal homolog 8 (Drosophila)	BC021207|ATOH8|84913|atonal homolog 8 (Drosophila)	AK027614|ATOH8|84913|atonal homolog 8 (Drosophila)	BC094832|ATOH8|84913|atonal homolog 8 (Drosophila)	AF529205|ATOH8|84913|atonal homolog 8 (Drosophila)
hg19_v1_chr1_-_108742738_108742802	0.028778	SOX2.p2	AF123303|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	EU832524|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	EU832606|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	AJ619987|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	AK316506|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24
hg19_v1_chr4_+_144434555_144434902	0.0287632	SOX2.p2	NM_003601|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AK316444|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AK302841|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	BC023144|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AB010882|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AK308424|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
hg19_v1_chr1_-_247171354_247171394	0.0286634	SOX2.p2	BC055096|ZNF695|57116|zinc finger protein 695	NM_001204221|ZNF695|57116|zinc finger protein 695	NM_020394|ZNF695|57116|zinc finger protein 695
hg19_v1_chr6_-_27835308_27835370	0.0286573	SOX2.p2	EU446959|HIST1H1B|3009|histone cluster 1, H1b	BC101583|HIST1H1B|3009|histone cluster 1, H1b	BC101581|HIST1H1B|3009|histone cluster 1, H1b	BC069101|HIST1H1B|3009|histone cluster 1, H1b	NM_005322|HIST1H1B|3009|histone cluster 1, H1b
hg19_v1_chr19_+_58361219_58361406	0.0286105	SOX2.p2	AK027616|ZNF587|84914|zinc finger protein 587	BC126237|ZNF587|84914|zinc finger protein 587	BC126239|ZNF587|84914|zinc finger protein 587	BC144112|ZNF587|84914|zinc finger protein 587	BC144113|ZNF587|84914|zinc finger protein 587
hg19_v1_chr8_+_23386362_23386378	0.0285129	SOX2.p2	NM_016612|SLC25A37|51312|solute carrier family 25, member 37
hg19_v1_chr3_-_48956817_48956817	0.0285058	SOX2.p2	AK097724|C3orf71|646450|chromosome 3 open reading frame 71	NM_001123040|C3orf71|646450|chromosome 3 open reading frame 71
hg19_v1_chr3_+_182970853_182971044	0.0283651	SOX2.p2	NM_032047|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	AK074424|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg19_v1_chr7_-_129845216_129845337	0.0283141	SOX2.p2	AK027678|TMEM209|84928|transmembrane protein 209	BC057784|TMEM209|84928|transmembrane protein 209	AK027709|TMEM209|84928|transmembrane protein 209	BC045618|TMEM209|84928|transmembrane protein 209	AK074732|TMEM209|84928|transmembrane protein 209	NM_032842|TMEM209|84928|transmembrane protein 209
hg19_v1_chr2_+_172821874_172822000	0.0282733	SOX2.p2	BC018682|HAT1|8520|histone acetyltransferase 1
hg19_v1_chr17_+_43971655_43971747	0.0282602	SOX2.p2	NM_001123066|MAPT|4137|microtubule-associated protein tau	NM_001123067|MAPT|4137|microtubule-associated protein tau	NM_001203251|MAPT|4137|microtubule-associated protein tau	NM_001203252|MAPT|4137|microtubule-associated protein tau	NM_005910|MAPT|4137|microtubule-associated protein tau	NM_016834|MAPT|4137|microtubule-associated protein tau	NM_016835|MAPT|4137|microtubule-associated protein tau	NM_016841|MAPT|4137|microtubule-associated protein tau
hg19_v1_chr1_+_225997742_225997802	0.0282138	SOX2.p2	AK313436|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	NM_001136018|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)
hg19_v1_chr7_-_23509631_23509728	0.0282112	SOX2.p2	
hg19_v1_chr2_+_46926049_46926098	0.0281877	SOX2.p2	AK290194|SOCS5|9655|suppressor of cytokine signaling 5	AB014571|SOCS5|9655|suppressor of cytokine signaling 5	AL136896|SOCS5|9655|suppressor of cytokine signaling 5	NM_014011|SOCS5|9655|suppressor of cytokine signaling 5
hg19_v1_chr19_+_50180492_50180551	0.028136	SOX2.p2	AK295973|PRMT1|3276|protein arginine methyltransferase 1	BC019268|PRMT1|3276|protein arginine methyltransferase 1	AY775289|PRMT1|3276|protein arginine methyltransferase 1	D66904|PRMT1|3276|protein arginine methyltransferase 1	Y10805|PRMT1|3276|protein arginine methyltransferase 1	Y10806|PRMT1|3276|protein arginine methyltransferase 1	Y10807|PRMT1|3276|protein arginine methyltransferase 1	BC109282|PRMT1|3276|protein arginine methyltransferase 1	BC109283|PRMT1|3276|protein arginine methyltransferase 1
hg19_v1_chr9_-_132597540_132597559	0.0280278	SOX2.p2	AK057004|C9orf78|51759|chromosome 9 open reading frame 78	AF151054|C9orf78|51759|chromosome 9 open reading frame 78
hg19_v1_chr5_+_52284903_52285337	0.0280021	SOX2.p2	NM_002203|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	AK307952|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	X17033|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143505|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143508|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143509|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143511|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143512|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)
hg19_v1_chr2_+_189839113_189839123	0.0279448	SOX2.p2	X14420|COL3A1|1281|collagen, type III, alpha 1
hg19_v1_chrX_-_47863260_47863446	0.0279192	SOX2.p2	BC114216|ZNF182|7569|zinc finger protein 182	AK299325|ZNF182|7569|zinc finger protein 182	AK122874|ZNF182|7569|zinc finger protein 182	NM_001007088|ZNF182|7569|zinc finger protein 182	NM_006962|ZNF182|7569|zinc finger protein 182	NM_001178099|ZNF182|7569|zinc finger protein 182
hg19_v1_chr1_-_78444690_78444763	0.0278994	SOX2.p2	DQ895919|FUBP1|8880|far upstream element (FUSE) binding protein 1	EU176379|FUBP1|8880|far upstream element (FUSE) binding protein 1	U05040|FUBP1|8880|far upstream element (FUSE) binding protein 1	BC010083|FUBP1|8880|far upstream element (FUSE) binding protein 1	BC017247|FUBP1|8880|far upstream element (FUSE) binding protein 1	AK300032|FUBP1|8880|far upstream element (FUSE) binding protein 1	AK301581|FUBP1|8880|far upstream element (FUSE) binding protein 1	AK303568|FUBP1|8880|far upstream element (FUSE) binding protein 1
hg19_v1_chr20_-_1165116_1165116	0.0278815	SOX2.p2	AK002052|TMEM74B|55321|transmembrane protein 74B	NM_018354|TMEM74B|55321|transmembrane protein 74B
hg19_v1_chr4_+_3371723_3371723	0.0278368	SOX2.p2	AF030109|RGS12|6002|regulator of G-protein signaling 12	NM_198227|RGS12|6002|regulator of G-protein signaling 12
hg19_v1_chr16_-_188258_188651	0.0278336	SOX2.p2	AK298795|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	BC004185|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	BC012825|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	AK300736|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)	BC020392|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)
hg19_v1_chr9_-_4741085_4741262	0.0278222	SOX2.p2	AB021870|AK3|50808|adenylate kinase 3	DQ891660|AK3|50808|adenylate kinase 3	DQ894847|AK3|50808|adenylate kinase 3	AK027534|AK3|50808|adenylate kinase 3	BC013771|AK3|50808|adenylate kinase 3	NM_001199854|AK3|50808|adenylate kinase 3	AK001951|AK3|50808|adenylate kinase 3	AK001553|AK3|50808|adenylate kinase 3	AK298200|AK3|50808|adenylate kinase 3
hg19_v1_chr11_-_64546144_64546172	0.0277259	SOX2.p2	Y08766|SF1|7536|splicing factor 1
hg19_v1_chr1_-_200378832_200378986	0.0277221	SOX2.p2	AF125158|ZNF281|23528|zinc finger protein 281	BC051905|ZNF281|23528|zinc finger protein 281
hg19_v1_chr22_-_18257160_18257189	0.0276314	SOX2.p2	D89803|BID|637|BH3 interacting domain death agonist	AY005151|BID|637|BH3 interacting domain death agonist	EU678292|BID|637|BH3 interacting domain death agonist
hg19_v1_chr16_-_23521794_23521801	0.0275022	SOX2.p2	BC000284|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2	AK308425|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2
hg19_v1_chr1_+_182808436_182808478	0.027429	SOX2.p2	NM_001357|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	AK226102|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9
hg19_v1_chr4_-_39528921_39529094	0.0272569	SOX2.p2	AF061016|UGDH|7358|UDP-glucose 6-dehydrogenase	AJ007702|UGDH|7358|UDP-glucose 6-dehydrogenase	BC022781|UGDH|7358|UDP-glucose 6-dehydrogenase	AK097930|UGDH|7358|UDP-glucose 6-dehydrogenase	AK297737|UGDH|7358|UDP-glucose 6-dehydrogenase
hg19_v1_chr21_-_27107959_27107983	0.0271877	SOX2.p2	NM_001003696|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001003697|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001003701|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001003703|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001685|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	BC001178|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6
hg19_v1_chr5_-_150537306_150537333	0.0271718	SOX2.p2	AK126836|ANXA6|309|annexin A6	AK290672|ANXA6|309|annexin A6	AK130077|ANXA6|309|annexin A6	Y00097|ANXA6|309|annexin A6	AK298582|ANXA6|309|annexin A6
hg19_v1_chr20_+_30697291_30697447	0.0271022	SOX2.p2	NM_014742|TM9SF4|9777|transmembrane 9 superfamily protein member 4
hg19_v1_chr10_+_35426709_35426763	0.0270732	SOX2.p2	NM_183011|CREM|1390|cAMP responsive element modulator	NM_183012|CREM|1390|cAMP responsive element modulator
hg19_v1_chr1_-_25291474_25291611	0.0270031	SOX2.p2	BC013362|RUNX3|864|runt-related transcription factor 3	AK310945|RUNX3|864|runt-related transcription factor 3	NM_001031680|RUNX3|864|runt-related transcription factor 3	AF022726|RUNX3|864|runt-related transcription factor 3
hg19_v1_chr10_-_120514277_120514298	0.026934	SOX2.p2	
hg19_v1_chr11_+_64889802_64889814	0.0269325	SOX2.p2	U39400|MRPL49|740|mitochondrial ribosomal protein L49	BC004378|MRPL49|740|mitochondrial ribosomal protein L49	AB062395|MRPL49|740|mitochondrial ribosomal protein L49
hg19_v1_chr17_-_62914902_62914902	0.0269231	SOX2.p2	AB011135|LRRC37A3|374819|leucine rich repeat containing 37, member A3	NM_199340|LRRC37A3|374819|leucine rich repeat containing 37, member A3
hg19_v1_chr15_+_38544119_38544671	0.0268619	SOX2.p2	AK091222|SPRED1|161742|sprouty-related, EVH1 domain containing 1	BC137480|SPRED1|161742|sprouty-related, EVH1 domain containing 1	BC137481|SPRED1|161742|sprouty-related, EVH1 domain containing 1
hg19_v1_chr12_+_45609832_45609866	0.0266944	SOX2.p2	AK303996|ANO6|196527|anoctamin 6
hg19_v1_chr5_+_68666861_68666915	0.0266933	SOX2.p2	NM_133340|RAD17|5884|RAD17 homolog (S. pombe)	NM_133341|RAD17|5884|RAD17 homolog (S. pombe)	AJ001642|RAD17|5884|RAD17 homolog (S. pombe)	AJ004977|RAD17|5884|RAD17 homolog (S. pombe)	AF098533|RAD17|5884|RAD17 homolog (S. pombe)	AF098534|RAD17|5884|RAD17 homolog (S. pombe)
hg19_v1_chr12_-_58146110_58146116	0.0266297	SOX2.p2	BC015669|CDK4|1019|cyclin-dependent kinase 4
hg19_v1_chr8_-_124054591_124054647	0.0265939	SOX2.p2	NM_001134671|DERL1|79139|Der1-like domain family, member 1	NM_024295|DERL1|79139|Der1-like domain family, member 1
hg19_v1_chr11_+_69455938_69455962	0.0265486	SOX2.p2	BC000076|CCND1|595|cyclin D1	BC001501|CCND1|595|cyclin D1	BC014078|CCND1|595|cyclin D1	M73554|CCND1|595|cyclin D1	BC023620|CCND1|595|cyclin D1
hg19_v1_chr12_-_10022457_10022457	0.0265449	SOX2.p2	NM_005127|CLEC2B|9976|C-type lectin domain family 2, member B
hg19_v1_chr6_-_38670871_38670880	0.0265413	SOX2.p2	BC015934|GLO1|2739|glyoxalase I
hg19_v1_chr1_-_200379072_200379162	0.0264727	SOX2.p2	AK297233|ZNF281|23528|zinc finger protein 281	AK022916|ZNF281|23528|zinc finger protein 281	AK094701|ZNF281|23528|zinc finger protein 281
hg19_v1_chr15_+_33603162_33603176	0.0264481	SOX2.p2	AB001025|RYR3|6263|ryanodine receptor 3	AJ001515|RYR3|6263|ryanodine receptor 3	NM_001036|RYR3|6263|ryanodine receptor 3	NM_001243996|RYR3|6263|ryanodine receptor 3
hg19_v1_chr20_-_50384861_50384895	0.0264421	SOX2.p2	AB014511|ATP9A|10079|ATPase, class II, type 9A	AK299064|ATP9A|10079|ATPase, class II, type 9A
hg19_v1_chr6_+_10555948_10555948	0.0264327	SOX2.p2	NM_001491|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
hg19_v1_chr11_+_93862163_93862478	0.0263787	SOX2.p2	AY359023|PANX1|24145|pannexin 1	FM201789|PANX1|24145|pannexin 1
hg19_v1_chr6_-_74229094_74229244	0.026311	SOX2.p2	AK222519|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	BC020477|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	DQ867534|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	AF328730|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	AF397403|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1
hg19_v1_chr3_+_38307297_38307396	0.026309	SOX2.p2	NM_004256|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13	AK315301|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13	BC035973|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13	AB010438|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13	AK298375|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13
hg19_v1_chr5_+_95997871_95997986	0.0262796	SOX2.p2	BC016066|CAST|831|calpastatin	NM_001042440|CAST|831|calpastatin
hg19_v1_chr12_-_58146025_58146107	0.0262769	SOX2.p2	U79269|CDK4|1019|cyclin-dependent kinase 4	AK313701|CDK4|1019|cyclin-dependent kinase 4	Z48970|CDK4|1019|cyclin-dependent kinase 4	BC003644|CDK4|1019|cyclin-dependent kinase 4	BC010153|CDK4|1019|cyclin-dependent kinase 4
hg19_v1_chr6_-_131949188_131949386	0.0262629	SOX2.p2	AF135022|MED23|9439|mediator complex subunit 23	AM393572|MED23|9439|mediator complex subunit 23	EU832308|MED23|9439|mediator complex subunit 23	EU832392|MED23|9439|mediator complex subunit 23	EU392526|MED23|9439|mediator complex subunit 23	EU392528|MED23|9439|mediator complex subunit 23	EU392529|MED23|9439|mediator complex subunit 23	EU392530|MED23|9439|mediator complex subunit 23	EU392531|MED23|9439|mediator complex subunit 23	AK315030|MED23|9439|mediator complex subunit 23	AF105332|MED23|9439|mediator complex subunit 23	EU392520|MED23|9439|mediator complex subunit 23	EU392522|MED23|9439|mediator complex subunit 23	EU392527|MED23|9439|mediator complex subunit 23	EU392532|MED23|9439|mediator complex subunit 23	BC060759|MED23|9439|mediator complex subunit 23	AF104255|MED23|9439|mediator complex subunit 23	AL136776|MED23|9439|mediator complex subunit 23	AB033042|MED23|9439|mediator complex subunit 23	BC007088|MED23|9439|mediator complex subunit 23	NM_004830|MED23|9439|mediator complex subunit 23	NM_015979|MED23|9439|mediator complex subunit 23
hg19_v1_chr16_-_11680146_11680228	0.0262195	SOX2.p2	BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor	BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor	BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor	BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor	BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor	BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor	BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor	AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor	NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor	U77396|LITAF|9516|lipopolysaccharide-induced TNF factor
hg19_v1_chr6_+_34204663_34204679	0.0261758	SOX2.p2	X14957|HMGA1|3159|high mobility group AT-hook 1	X14958|HMGA1|3159|high mobility group AT-hook 1	AK308245|HMGA1|3159|high mobility group AT-hook 1
hg19_v1_chr8_+_133787611_133787673	0.026109	SOX2.p2	AK290506|PHF20L1|51105|PHD finger protein 20-like 1	BC002822|PHF20L1|51105|PHD finger protein 20-like 1	BC015211|PHF20L1|51105|PHD finger protein 20-like 1
hg19_v1_chr12_+_26205490_26205496	0.0260873	SOX2.p2	NM_001164746|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	AK292333|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8
hg19_v1_chr9_-_37465250_37465271	0.0260793	SOX2.p2	BC010007|ZBTB5|9925|zinc finger and BTB domain containing 5
hg19_v1_chr17_-_79829174_79829235	0.0260647	SOX2.p2	BC016185|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC024258|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC075827|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	X69550|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC027730|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC028333|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC013846|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC009759|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	AK312347|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	AK293147|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg19_v1_chr6_-_137540551_137540566	0.0260299	SOX2.p2	NM_000416|IFNGR1|3459|interferon gamma receptor 1
hg19_v1_chr5_+_86564226_86564280	0.0259766	SOX2.p2	
hg19_v1_chr11_-_47664014_47664212	0.02596	SOX2.p2	DQ891810|MTCH2|23788|mitochondrial carrier 2	DQ894993|MTCH2|23788|mitochondrial carrier 2	AK223097|MTCH2|23788|mitochondrial carrier 2	BC000875|MTCH2|23788|mitochondrial carrier 2	AY380792|MTCH2|23788|mitochondrial carrier 2	AF085361|MTCH2|23788|mitochondrial carrier 2	AF176008|MTCH2|23788|mitochondrial carrier 2	AK295218|MTCH2|23788|mitochondrial carrier 2	AK313032|MTCH2|23788|mitochondrial carrier 2	NM_014342|MTCH2|23788|mitochondrial carrier 2
hg19_v1_chr15_+_45879416_45879556	0.025954	SOX2.p2	AF080470|PLDN|26258|pallidin homolog (mouse)	NM_012388|PLDN|26258|pallidin homolog (mouse)
hg19_v1_chr3_-_160101443_160101553	0.0259475	SOX2.p2	AB037795|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)	NM_001190242|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)
hg19_v1_chr16_-_11680756_11680823	0.0258756	SOX2.p2	BC039840|LITAF|9516|lipopolysaccharide-induced TNF factor	BC016491|LITAF|9516|lipopolysaccharide-induced TNF factor	BC008309|LITAF|9516|lipopolysaccharide-induced TNF factor	BC065293|LITAF|9516|lipopolysaccharide-induced TNF factor	BC000053|LITAF|9516|lipopolysaccharide-induced TNF factor	AK095955|LITAF|9516|lipopolysaccharide-induced TNF factor	AK130788|LITAF|9516|lipopolysaccharide-induced TNF factor	AK314519|LITAF|9516|lipopolysaccharide-induced TNF factor	NM_001136472|LITAF|9516|lipopolysaccharide-induced TNF factor	NM_001136473|LITAF|9516|lipopolysaccharide-induced TNF factor
hg19_v1_chr4_+_100495972_100496043	0.0258746	SOX2.p2	AK225328|MTTP|4547|microsomal triglyceride transfer protein	BC062696|MTTP|4547|microsomal triglyceride transfer protein	X59657|MTTP|4547|microsomal triglyceride transfer protein	AK290793|MTTP|4547|microsomal triglyceride transfer protein	BC125110|MTTP|4547|microsomal triglyceride transfer protein	BC125111|MTTP|4547|microsomal triglyceride transfer protein	X75500|MTTP|4547|microsomal triglyceride transfer protein	X91148|MTTP|4547|microsomal triglyceride transfer protein
hg19_v1_chr22_+_31795581_31795669	0.0258616	SOX2.p2	AK315659|DRG1|4733|developmentally regulated GTP binding protein 1	BC019285|DRG1|4733|developmentally regulated GTP binding protein 1	AJ005940|DRG1|4733|developmentally regulated GTP binding protein 1	BC020803|DRG1|4733|developmentally regulated GTP binding protein 1	AF078103|DRG1|4733|developmentally regulated GTP binding protein 1	AK098576|DRG1|4733|developmentally regulated GTP binding protein 1	CR456488|DRG1|4733|developmentally regulated GTP binding protein 1	DQ890690|DRG1|4733|developmentally regulated GTP binding protein 1	DQ893872|DRG1|4733|developmentally regulated GTP binding protein 1	CU013048|DRG1|4733|developmentally regulated GTP binding protein 1	CU013336|DRG1|4733|developmentally regulated GTP binding protein 1	BT007237|DRG1|4733|developmentally regulated GTP binding protein 1	CR542059|DRG1|4733|developmentally regulated GTP binding protein 1
hg19_v1_chr2_+_207024614_207024703	0.0257954	SOX2.p2	AK291910|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	AK310096|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	D28350|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BC067787|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BC029316|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BC004931|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BT007079|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	CR456825|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2
hg19_v1_chr3_-_47823337_47823342	0.0257629	SOX2.p2	BC021862|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg19_v1_chr10_-_5446781_5446796	0.025742	SOX2.p2	BC098247|TUBAL3|79861|tubulin, alpha-like 3	BC099716|TUBAL3|79861|tubulin, alpha-like 3	BC105634|TUBAL3|79861|tubulin, alpha-like 3	AK296616|TUBAL3|79861|tubulin, alpha-like 3	AK025318|TUBAL3|79861|tubulin, alpha-like 3	NM_001171864|TUBAL3|79861|tubulin, alpha-like 3	NM_024803|TUBAL3|79861|tubulin, alpha-like 3
hg19_v1_chr5_-_54603401_54603522	0.0257056	SOX2.p2	BC056219|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	AY036974|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	AK308332|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	NM_019030|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	BX649135|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29
hg19_v1_chr11_-_18610182_18610321	0.0256793	SOX2.p2	AK295501|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	BC011011|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	BC064566|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	AF503350|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	AK296835|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	AK316191|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	AK301537|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	NM_001040697|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	NM_018314|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	AK314521|UEVLD|55293|UEV and lactate/malate dehyrogenase domains
hg19_v1_chrX_-_71792610_71792718	0.0256751	SOX2.p2	EU446822|HDAC8|55869|histone deacetylase 8	EU832800|HDAC8|55869|histone deacetylase 8	GQ129378|HDAC8|55869|histone deacetylase 8	AF245664|HDAC8|55869|histone deacetylase 8	AY429539|HDAC8|55869|histone deacetylase 8	BC050433|HDAC8|55869|histone deacetylase 8	AK300895|HDAC8|55869|histone deacetylase 8	AJ277724|HDAC8|55869|histone deacetylase 8	AK294903|HDAC8|55869|histone deacetylase 8	AF212246|HDAC8|55869|histone deacetylase 8	AK298767|HDAC8|55869|histone deacetylase 8
hg19_v1_chr6_-_167275657_167275800	0.0256625	SOX2.p2	NM_001006932|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	AB209116|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg19_v1_chr6_-_42713822_42713835	0.0256538	SOX2.p2	BC020170|TBCC|6903|tubulin folding cofactor C	AK312681|TBCC|6903|tubulin folding cofactor C	U61234|TBCC|6903|tubulin folding cofactor C
hg19_v1_chr4_+_15480833_15480865	0.0255493	SOX2.p2	AB037766|CC2D2A|57545|coiled-coil and C2 domain containing 2A	BC103710|CC2D2A|57545|coiled-coil and C2 domain containing 2A
hg19_v1_chr16_-_23521803_23521818	0.0255405	SOX2.p2	AK024619|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2	NM_015044|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2
hg19_v1_chr8_+_133787556_133787610	0.025443	SOX2.p2	NM_016018|PHF20L1|51105|PHD finger protein 20-like 1	NM_032205|PHF20L1|51105|PHD finger protein 20-like 1	NM_198513|PHF20L1|51105|PHD finger protein 20-like 1
hg19_v1_chr9_-_132597561_132597598	0.0254391	SOX2.p2	NM_016520|C9orf78|51759|chromosome 9 open reading frame 78
hg19_v1_chr7_+_107301079_107301079	0.0252352	SOX2.p2	AF030880|SLC26A4|5172|solute carrier family 26, member 4	NM_000441|SLC26A4|5172|solute carrier family 26, member 4
hg19_v1_chr6_-_84140744_84140753	0.0252103	SOX2.p2	BC025246|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic
hg19_v1_chr17_+_57697403_57697488	0.0251957	SOX2.p2	
hg19_v1_chr11_-_65625737_65625803	0.0251793	SOX2.p2	NM_005507|CFL1|1072|cofilin 1 (non-muscle)
hg19_v1_chr15_+_75074714_75074998	0.0251235	SOX2.p2	X60114|CSK|1445|c-src tyrosine kinase	AK298245|CSK|1445|c-src tyrosine kinase	AK223626|CSK|1445|c-src tyrosine kinase	AK310136|CSK|1445|c-src tyrosine kinase	AK312669|CSK|1445|c-src tyrosine kinase	BC104847|CSK|1445|c-src tyrosine kinase	BC104875|CSK|1445|c-src tyrosine kinase	X59932|CSK|1445|c-src tyrosine kinase
hg19_v1_chr11_-_77348758_77348871	0.0250339	SOX2.p2	AF026003|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	BT019907|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	AF005422|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	BC119634|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	BC119635|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	U53454|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	AK315259|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	X91788|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	NM_001293|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A
hg19_v1_chr6_+_126661221_126661319	0.0250314	SOX2.p2	BC039556|CENPW|387103|centromere protein W	NM_001012507|CENPW|387103|centromere protein W	AY902475|CENPW|387103|centromere protein W	BC062798|CENPW|387103|centromere protein W	BC046178|CENPW|387103|centromere protein W	BC017928|CENPW|387103|centromere protein W
hg19_v1_chr19_-_44123732_44123767	0.0249963	SOX2.p2	BC015950|ZNF428|126299|zinc finger protein 428	AY257197|ZNF428|126299|zinc finger protein 428	BC045799|ZNF428|126299|zinc finger protein 428
hg19_v1_chr4_+_30721865_30722133	0.0249384	SOX2.p2	NM_032456|PCDH7|5099|protocadherin 7	AB006755|PCDH7|5099|protocadherin 7	NM_001173523|PCDH7|5099|protocadherin 7	NM_002589|PCDH7|5099|protocadherin 7	NM_032457|PCDH7|5099|protocadherin 7	BC020338|PCDH7|5099|protocadherin 7
hg19_v1_chr3_+_127771342_127771391	0.0248992	SOX2.p2	
hg19_v1_chr1_+_226250421_226250431	0.0248938	SOX2.p2	AK291102|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4	AK293541|H3F3A|3020|H3 histone, family 3A	BC029405|H3F3A|3020|H3 histone, family 3A	BC067757|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4	BC095447|H3F3A|3020|H3 histone, family 3A	M11354|H3F3A|3020|H3 histone, family 3A	BC066901|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4
hg19_v1_chr11_+_120973374_120973374	0.0248618	SOX2.p2	NM_005422|TECTA|7007|tectorin alpha
hg19_v1_chr5_+_109025085_109025109	0.0248161	SOX2.p2	
hg19_v1_chr6_-_94129059_94129307	0.0247954	SOX2.p2	BC126125|EPHA7|2045|EPH receptor A7	BC126151|EPHA7|2045|EPH receptor A7	BC143857|EPHA7|2045|EPH receptor A7	BC143858|EPHA7|2045|EPH receptor A7	L36642|EPHA7|2045|EPH receptor A7	BC027940|EPHA7|2045|EPH receptor A7	AK313529|EPHA7|2045|EPH receptor A7	AB209269|EPHA7|2045|EPH receptor A7	NM_004440|EPHA7|2045|EPH receptor A7
hg19_v1_chr3_+_14989076_14989235	0.0247946	SOX2.p2	AK290590|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2	L27586|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2	NM_003298|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2
hg19_v1_chr22_-_42084819_42084912	0.0247134	SOX2.p2	BC005358|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	AF155235|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	NM_001003796|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)
hg19_v1_chr2_+_70314734_70314760	0.0246901	SOX2.p2	BC039742|PCBP1|5093|poly(rC) binding protein 1
hg19_v1_chr3_-_182880463_182880666	0.0246901	SOX2.p2	AB013924|LAMP3|27074|lysosomal-associated membrane protein 3	AK313172|LAMP3|27074|lysosomal-associated membrane protein 3	BC032940|LAMP3|27074|lysosomal-associated membrane protein 3	NM_014398|LAMP3|27074|lysosomal-associated membrane protein 3
hg19_v1_chr20_+_21283921_21284030	0.0246391	SOX2.p2	BC142960|XRN2|22803|5'-3' exoribonuclease 2	NM_012255|XRN2|22803|5'-3' exoribonuclease 2	AK001573|XRN2|22803|5'-3' exoribonuclease 2	AF064257|XRN2|22803|5'-3' exoribonuclease 2	BC131775|XRN2|22803|5'-3' exoribonuclease 2	AY382900|XRN2|22803|5'-3' exoribonuclease 2	AK303312|XRN2|22803|5'-3' exoribonuclease 2	AK314602|XRN2|22803|5'-3' exoribonuclease 2	AL136841|XRN2|22803|5'-3' exoribonuclease 2	AF152169|XRN2|22803|5'-3' exoribonuclease 2	BC000315|XRN2|22803|5'-3' exoribonuclease 2
hg19_v1_chr6_-_38670882_38670902	0.0245135	SOX2.p2	AK129573|GLO1|2739|glyoxalase I	L07837|GLO1|2739|glyoxalase I	BC001741|GLO1|2739|glyoxalase I	AL833442|GLO1|2739|glyoxalase I
hg19_v1_chr2_+_219646704_219647079	0.0244176	SOX2.p2	X59812|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	AK290418|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	M62401|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	BC040430|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	BC051851|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	AK310782|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	AY178622|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1
hg19_v1_chr3_-_192445344_192445387	0.0243134	SOX2.p2	AK312513|FGF12|2257|fibroblast growth factor 12	BC022524|FGF12|2257|fibroblast growth factor 12	NM_004113|FGF12|2257|fibroblast growth factor 12
hg19_v1_chr17_+_42264573_42264581	0.0242957	SOX2.p2	AL833899|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	NM_177441|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2
hg19_v1_chr20_+_30697512_30697570	0.0241289	SOX2.p2	AK126534|TM9SF4|9777|transmembrane 9 superfamily protein member 4	AK294980|TM9SF4|9777|transmembrane 9 superfamily protein member 4	AK296500|TM9SF4|9777|transmembrane 9 superfamily protein member 4	AK302439|TM9SF4|9777|transmembrane 9 superfamily protein member 4	BC021107|TM9SF4|9777|transmembrane 9 superfamily protein member 4	D87444|TM9SF4|9777|transmembrane 9 superfamily protein member 4
hg19_v1_chr8_+_11660272_11660291	0.0240781	SOX2.p2	BC003573|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	BC009251|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	S76822|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1
hg19_v1_chr19_-_44124013_44124013	0.0240755	SOX2.p2	NM_182498|ZNF428|126299|zinc finger protein 428
hg19_v1_chr6_+_84569427_84569501	0.0240735	SOX2.p2	AM393033|CYB5R4|51167|cytochrome b5 reductase 4
hg19_v1_chr8_+_86157732_86157755	0.0240563	SOX2.p2	BC052602|CA13|377677|carbonic anhydrase XIII
hg19_v1_chr6_-_84140651_84140734	0.0239828	SOX2.p2	U43944|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	X77244|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	DQ892155|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	EU176687|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	L34035|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic
hg19_v1_chr6_+_127664496_127664627	0.0238597	SOX2.p2	
hg19_v1_chr10_-_50732142_50732358	0.0238353	SOX2.p2	BC028954|PGBD3|267004|piggyBac transposable element derived 3	AK074682|PGBD3|267004|piggyBac transposable element derived 3	BC063690|PGBD3|267004|piggyBac transposable element derived 3	NM_170753|PGBD3|267004|piggyBac transposable element derived 3
hg19_v1_chr2_+_70314903_70314932	0.0238353	SOX2.p2	AK130439|PCBP1|5093|poly(rC) binding protein 1
hg19_v1_chr9_+_103235489_103235519	0.0238157	SOX2.p2	NM_003692|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v1_chrX_+_41193843_41193887	0.0237562	SOX2.p2	AK304661|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AK127902|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked
hg19_v1_chr12_+_69080722_69080805	0.0235578	SOX2.p2	AJ295745|NUP107|57122|nucleoporin 107kDa	NM_020401|NUP107|57122|nucleoporin 107kDa	AK055629|NUP107|57122|nucleoporin 107kDa	AK315157|NUP107|57122|nucleoporin 107kDa	AK094183|NUP107|57122|nucleoporin 107kDa	BC017167|NUP107|57122|nucleoporin 107kDa	BC043343|NUP107|57122|nucleoporin 107kDa
hg19_v1_chr16_-_4896197_4896210	0.0234597	SOX2.p2	BC003693|GLYR1|84656|glyoxylate reductase 1 homolog (Arabidopsis)
hg19_v1_chr5_+_180650709_180650742	0.0234153	SOX2.p2	BC090953|TRIM41|90933|tripartite motif containing 41
hg19_v1_chr17_+_30677187_30677304	0.0233976	SOX2.p2	AK291801|ZNF207|7756|zinc finger protein 207	AK309979|ZNF207|7756|zinc finger protein 207	BC008023|ZNF207|7756|zinc finger protein 207	AB209215|ZNF207|7756|zinc finger protein 207	BC000962|ZNF207|7756|zinc finger protein 207	BT007365|ZNF207|7756|zinc finger protein 207
hg19_v1_chr17_-_79829272_79829284	0.0233851	SOX2.p2	NM_001185078|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	NM_004309|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg19_v1_chr4_+_78079302_78079685	0.0233766	SOX2.p2	L49506|CCNG2|901|cyclin G2	AK293899|CCNG2|901|cyclin G2	BT019503|CCNG2|901|cyclin G2	CR542181|CCNG2|901|cyclin G2	CR542200|CCNG2|901|cyclin G2	DQ890836|CCNG2|901|cyclin G2	DQ893991|CCNG2|901|cyclin G2
hg19_v1_chr3_+_38263076_38263090	0.0233672	SOX2.p2	AF087893|OXSR1|9943|oxidative-stress responsive 1
hg19_v1_chr8_+_11660207_11660269	0.0233581	SOX2.p2	AK296043|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	AK315993|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	AK311246|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	X69141|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	AK301617|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1
hg19_v1_chr4_+_170541728_170541987	0.0233326	SOX2.p2	AK304362|CLCN3|1182|chloride channel 3	BC054877|CLCN3|1182|chloride channel 3	BC026256|CLCN3|1182|chloride channel 3	BC136510|CLCN3|1182|chloride channel 3
hg19_v1_chr10_+_18429605_18429809	0.0233143	SOX2.p2	NM_201593|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_201596|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_201597|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	S60415|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	BC136409|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AF137376|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AF423191|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AY393860|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AY675091|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK296471|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK311694|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK307526|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_001167945|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_201571|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_201572|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK293837|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit
hg19_v1_chr5_-_150537261_150537302	0.0232691	SOX2.p2	J03578|ANXA6|309|annexin A6	BC017046|ANXA6|309|annexin A6
hg19_v1_chr2_+_48844936_48845014	0.0231854	SOX2.p2	AK302220|GTF2A1L|11036|general transcription factor IIA, 1-like	NM_001193487|GTF2A1L|11036|general transcription factor IIA, 1-like	NM_006872|GTF2A1L|11036|general transcription factor IIA, 1-like	BC025991|GTF2A1L|11036|general transcription factor IIA, 1-like	AK223350|GTF2A1L|11036|general transcription factor IIA, 1-like	AF106857|GTF2A1L|11036|general transcription factor IIA, 1-like	DQ891566|GTF2A1L|11036|general transcription factor IIA, 1-like	DQ894756|GTF2A1L|11036|general transcription factor IIA, 1-like	BC064585|GTF2A1L|11036|general transcription factor IIA, 1-like
hg19_v1_chr17_+_59477473_59477519	0.0231493	SOX2.p2	U28049|TBX2|6909|T-box 2
hg19_v1_chr17_-_5372179_5372206	0.023139	SOX2.p2	AK025625|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33
hg19_v1_chr12_-_46357949_46357972	0.0231379	SOX2.p2	
hg19_v1_chr11_-_96076328_96076478	0.022972	SOX2.p2	AB058722|MAML2|84441|mastermind-like 2 (Drosophila)	AY040322|MAML2|84441|mastermind-like 2 (Drosophila)	BC152449|MAML2|84441|mastermind-like 2 (Drosophila)	NM_032427|MAML2|84441|mastermind-like 2 (Drosophila)	AK308157|MAML2|84441|mastermind-like 2 (Drosophila)
hg19_v1_chr7_-_92747269_92747298	0.0229598	SOX2.p2	AB095925|SAMD9|54809|sterile alpha motif domain containing 9	BC150249|SAMD9|54809|sterile alpha motif domain containing 9	AK122951|SAMD9|54809|sterile alpha motif domain containing 9	BX647072|SAMD9|54809|sterile alpha motif domain containing 9	AF453311|SAMD9|54809|sterile alpha motif domain containing 9
hg19_v1_chr1_+_155179005_155179047	0.0229522	SOX2.p2	BC035616|MTX1|4580|metaxin 1	AX775989|MTX1|4580|metaxin 1
hg19_v1_chrX_+_70315637_70316378	0.0229083	SOX2.p2	NM_001170931|FOXO4|4303|forkhead box O4	NM_005938|FOXO4|4303|forkhead box O4	X93996|FOXO4|4303|forkhead box O4	BC106761|FOXO4|4303|forkhead box O4	AF384029|FOXO4|4303|forkhead box O4
hg19_v1_chr7_-_143059144_143059172	0.0228714	SOX2.p2	AK291470|FAM131B|9715|family with sequence similarity 131, member B	BC050543|FAM131B|9715|family with sequence similarity 131, member B	NM_014690|FAM131B|9715|family with sequence similarity 131, member B
hg19_v1_chr6_-_167040700_167040736	0.0228667	SOX2.p2	BC002363|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	NM_021135|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg19_v1_chr3_-_186857188_186857324	0.0228585	SOX2.p2	L05096|RPL39L|116832|ribosomal protein L39-like	AB063610|RPL39L|116832|ribosomal protein L39-like	BC012328|RPL39L|116832|ribosomal protein L39-like	NM_052969|RPL39L|116832|ribosomal protein L39-like
hg19_v1_chr6_-_83775453_83775597	0.0228503	SOX2.p2	BC101512|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC101538|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC143617|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC036049|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	AB126062|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	NM_198920|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC053645|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	AK298205|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC057845|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein
hg19_v1_chr17_+_30677138_30677175	0.0228431	SOX2.p2	BC002372|ZNF207|7756|zinc finger protein 207	NM_001032293|ZNF207|7756|zinc finger protein 207	NM_001098507|ZNF207|7756|zinc finger protein 207	NM_003457|ZNF207|7756|zinc finger protein 207
hg19_v1_chr6_-_17987693_17987827	0.022624	SOX2.p2	AJ291578|KIF13A|63971|kinesin family member 13A	AJ291579|KIF13A|63971|kinesin family member 13A	BC127115|KIF13A|63971|kinesin family member 13A	BC127116|KIF13A|63971|kinesin family member 13A	AY014403|KIF13A|63971|kinesin family member 13A	AY014404|KIF13A|63971|kinesin family member 13A
hg19_v1_chr9_+_134000939_134001009	0.0225894	SOX2.p2	BC105998|NUP214|8021|nucleoporin 214kDa	AK307573|NUP214|8021|nucleoporin 214kDa	NM_005085|NUP214|8021|nucleoporin 214kDa	AL832609|NUP214|8021|nucleoporin 214kDa	X64228|NUP214|8021|nucleoporin 214kDa	BC045620|NUP214|8021|nucleoporin 214kDa	BC012500|NUP214|8021|nucleoporin 214kDa
hg19_v1_chr1_-_45140117_45140179	0.0225704	SOX2.p2	AK296548|TMEM53|79639|transmembrane protein 53	BC007521|TMEM53|79639|transmembrane protein 53
hg19_v1_chr9_-_98269480_98269480	0.0225686	SOX2.p2	AB189440|PTCH1|5727|patched 1	NM_001083607|PTCH1|5727|patched 1
hg19_v1_chr7_-_128045995_128046039	0.0225412	SOX2.p2	AK054640|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	AK293413|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	AK297943|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	NM_001142573|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	NM_001142574|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	NM_001142575|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1
hg19_v1_chr3_+_57743027_57743378	0.0223523	SOX2.p2	AY358410|SLMAP|7871|sarcolemma associated protein	NM_007159|SLMAP|7871|sarcolemma associated protein	AK124200|SLMAP|7871|sarcolemma associated protein	BC114627|SLMAP|7871|sarcolemma associated protein	BC115701|SLMAP|7871|sarcolemma associated protein
hg19_v1_chr3_+_155588447_155588463	0.0223509	SOX2.p2	AK291504|GMPS|8833|guanine monphosphate synthetase	BC012178|GMPS|8833|guanine monphosphate synthetase
hg19_v1_chr6_-_42713783_42713810	0.0222999	SOX2.p2	BT007002|TBCC|6903|tubulin folding cofactor C
hg19_v1_chr16_-_31161381_31161414	0.0222919	SOX2.p2	BC137396|PRSS36|146547|protease, serine, 36	BC144615|PRSS36|146547|protease, serine, 36	AJ627034|PRSS36|146547|protease, serine, 36	AK075142|PRSS36|146547|protease, serine, 36	AK301409|PRSS36|146547|protease, serine, 36	AK290310|PRSS36|146547|protease, serine, 36	NM_173502|PRSS36|146547|protease, serine, 36
hg19_v1_chr3_+_179280746_179280881	0.022285	SOX2.p2	AB061315|ACTL6A|86|actin-like 6A	AK223212|ACTL6A|86|actin-like 6A	AK021756|ACTL6A|86|actin-like 6A	AB015907|ACTL6A|86|actin-like 6A	BC001391|ACTL6A|86|actin-like 6A	EU832285|ACTL6A|86|actin-like 6A	EU832370|ACTL6A|86|actin-like 6A	CR533529|ACTL6A|86|actin-like 6A
hg19_v1_chr17_-_17480325_17480354	0.0221687	SOX2.p2	CR457099|PEMT|10400|phosphatidylethanolamine N-methyltransferase
hg19_v1_chr1_-_182361311_182361370	0.0221659	SOX2.p2	AK122784|GLUL|2752|glutamate-ammonia ligase	NM_001033044|GLUL|2752|glutamate-ammonia ligase	NM_002065|GLUL|2752|glutamate-ammonia ligase
hg19_v1_chr1_-_2564428_2564502	0.022152	SOX2.p2	AK093058|MMEL1|79258|membrane metallo-endopeptidase-like 1	NM_033467|MMEL1|79258|membrane metallo-endopeptidase-like 1
hg19_v1_chr14_-_54908035_54908197	0.0221324	SOX2.p2	BX248284|CNIH|10175|cornichon homolog (Drosophila)	AY358635|CNIH|10175|cornichon homolog (Drosophila)	AK074781|CNIH|10175|cornichon homolog (Drosophila)	AK307074|CNIH|10175|cornichon homolog (Drosophila)	AK311897|CNIH|10175|cornichon homolog (Drosophila)	AF070654|CNIH|10175|cornichon homolog (Drosophila)	AF104398|CNIH|10175|cornichon homolog (Drosophila)	NM_005776|CNIH|10175|cornichon homolog (Drosophila)	BC103741|CNIH|10175|cornichon homolog (Drosophila)
hg19_v1_chr22_+_20105068_20105075	0.0221289	SOX2.p2	X83617|RANBP1|5902|RAN binding protein 1
hg19_v1_chr6_+_42981840_42981954	0.0220826	SOX2.p2	NM_057161|KLHDC3|116138|kelch domain containing 3	AK308917|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr7_-_122339186_122339209	0.0220696	SOX2.p2	BC022038|RNF133|168433|ring finger protein 133	AF447589|RNF133|168433|ring finger protein 133	NM_139175|RNF133|168433|ring finger protein 133	AK098524|RNF133|168433|ring finger protein 133
hg19_v1_chr6_+_64356430_64356455	0.0220601	SOX2.p2	AF091622|PHF3|23469|PHD finger protein 3	BC113650|PHF3|23469|PHD finger protein 3	BC113652|PHF3|23469|PHD finger protein 3	NM_015153|PHF3|23469|PHD finger protein 3	D87685|PHF3|23469|PHD finger protein 3
hg19_v1_chr5_-_77844975_77845071	0.0219998	SOX2.p2	CR936660|LHFPL2|10184|lipoma HMGIC fusion partner-like 2
hg19_v1_chr2_+_70314560_70314629	0.0219718	SOX2.p2	NM_006196|PCBP1|5093|poly(rC) binding protein 1
hg19_v1_chr16_-_4323055_4323075	0.0219015	SOX2.p2	AK309301|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)
hg19_v1_chr22_+_20104810_20105027	0.0218845	SOX2.p2	D38076|RANBP1|5902|RAN binding protein 1	NM_002882|RANBP1|5902|RAN binding protein 1	AK223506|RANBP1|5902|RAN binding protein 1
hg19_v1_chr10_-_98592186_98592214	0.0218388	SOX2.p2	
hg19_v1_chr17_+_61627818_61627834	0.0218209	SOX2.p2	AK294925|DCAF7|10238|DDB1 and CUL4 associated factor 7	NM_005828|DCAF7|10238|DDB1 and CUL4 associated factor 7
hg19_v1_chr17_-_79829237_79829260	0.0217388	SOX2.p2	BC005851|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC005875|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC106044|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	AK300816|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg19_v1_chr3_-_112359277_112359287	0.0216979	SOX2.p2	BX647817|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr22_+_20105095_20105118	0.0216925	SOX2.p2	CR456556|RANBP1|5902|RAN binding protein 1
hg19_v1_chr9_-_136933091_136933296	0.0216624	SOX2.p2	D26362|BRD3|8019|bromodomain containing 3	BC010699|BRD3|8019|bromodomain containing 3	NM_007371|BRD3|8019|bromodomain containing 3
hg19_v1_chr19_-_41870001_41870077	0.0216555	SOX2.p2	BC004157|B9D2|80776|B9 protein domain 2	BC004444|B9D2|80776|B9 protein domain 2	NM_030578|B9D2|80776|B9 protein domain 2
hg19_v1_chrX_+_65384078_65384206	0.0216375	SOX2.p2	NM_001130860|HEPH|9843|hephaestin	AK311043|HEPH|9843|hephaestin	AB014598|HEPH|9843|hephaestin	NM_014799|HEPH|9843|hephaestin	AY358990|HEPH|9843|hephaestin	AK307761|HEPH|9843|hephaestin
hg19_v1_chr17_-_56492938_56493134	0.0216325	SOX2.p2	AK296769|RNF43|54894|ring finger protein 43	AK000322|RNF43|54894|ring finger protein 43	BC109028|RNF43|54894|ring finger protein 43
hg19_v1_chr12_+_21168629_21168629	0.0215611	SOX2.p2	AF401642|SLCO1B7|338821|solute carrier organic anion transporter family, member 1B7 (non-functional)	NM_001009562|SLCO1B7|338821|solute carrier organic anion transporter family, member 1B7 (non-functional)
hg19_v1_chr9_+_116342939_116342939	0.0215474	SOX2.p2	AF006609|RGS3|5998|regulator of G-protein signaling 3	NM_021106|RGS3|5998|regulator of G-protein signaling 3
hg19_v1_chr9_+_116343169_116343207	0.0215091	SOX2.p2	U27655|RGS3|5998|regulator of G-protein signaling 3	AK125094|RGS3|5998|regulator of G-protein signaling 3
hg19_v1_chr9_-_91793681_91793739	0.0214201	SOX2.p2	BC026314|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3	NM_016848|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3
hg19_v1_chrX_+_77166178_77166208	0.0212442	SOX2.p2	NM_000052|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide	L06133|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide
hg19_v1_chr7_-_99698916_99698992	0.0212375	SOX2.p2	DQ895947|MCM7|4176|minichromosome maintenance complex component 7	EU176445|MCM7|4176|minichromosome maintenance complex component 7	BC009398|MCM7|4176|minichromosome maintenance complex component 7	AK293172|MCM7|4176|minichromosome maintenance complex component 7	AK226175|MCM7|4176|minichromosome maintenance complex component 7
hg19_v1_chr18_-_53255361_53255479	0.0211923	SOX2.p2	M74719|TCF4|6925|transcription factor 4
hg19_v1_chr6_-_136610932_136610988	0.0211819	SOX2.p2	BC132780|BCLAF1|9774|BCL2-associated transcription factor 1	BC144281|BCLAF1|9774|BCL2-associated transcription factor 1	BC144282|BCLAF1|9774|BCL2-associated transcription factor 1	BC144299|BCLAF1|9774|BCL2-associated transcription factor 1	BC047887|BCLAF1|9774|BCL2-associated transcription factor 1	BC056894|BCLAF1|9774|BCL2-associated transcription factor 1	D79986|BCLAF1|9774|BCL2-associated transcription factor 1	NM_001077440|BCLAF1|9774|BCL2-associated transcription factor 1	NM_001077441|BCLAF1|9774|BCL2-associated transcription factor 1	NM_014739|BCLAF1|9774|BCL2-associated transcription factor 1
hg19_v1_chr17_-_56494930_56494959	0.021145	SOX2.p2	NM_017763|RNF43|54894|ring finger protein 43	CR627423|RNF43|54894|ring finger protein 43
hg19_v1_chr3_-_182880432_182880447	0.0211157	SOX2.p2	DQ892118|LAMP3|27074|lysosomal-associated membrane protein 3
hg19_v1_chr22_-_41940391_41940609	0.0210343	SOX2.p2	AY092087|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)	AK026524|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)	AK129663|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)	NM_138338|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)	NM_001018050|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)	NM_001018052|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)	CR456459|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)
hg19_v1_chr17_-_47755340_47755524	0.0208579	SOX2.p2	BC003385|SPOP|8405|speckle-type POZ protein	AK222589|SPOP|8405|speckle-type POZ protein	AK312691|SPOP|8405|speckle-type POZ protein	AJ000644|SPOP|8405|speckle-type POZ protein	AK303268|SPOP|8405|speckle-type POZ protein	AK316366|SPOP|8405|speckle-type POZ protein	BC001269|SPOP|8405|speckle-type POZ protein	AK293587|SPOP|8405|speckle-type POZ protein	AK300616|SPOP|8405|speckle-type POZ protein	NM_001007226|SPOP|8405|speckle-type POZ protein	NM_001007227|SPOP|8405|speckle-type POZ protein	NM_001007228|SPOP|8405|speckle-type POZ protein	NM_001007229|SPOP|8405|speckle-type POZ protein	NM_001007230|SPOP|8405|speckle-type POZ protein	NM_003563|SPOP|8405|speckle-type POZ protein
hg19_v1_chr11_+_13690230_13690244	0.0208529	SOX2.p2	CR936619|FAR1|84188|fatty acyl CoA reductase 1
hg19_v1_chr5_+_72112417_72112564	0.0208257	SOX2.p2	NM_002270|TNPO1|3842|transportin 1	AK299671|TNPO1|3842|transportin 1	U70322|TNPO1|3842|transportin 1	AK301021|TNPO1|3842|transportin 1	AK308177|TNPO1|3842|transportin 1	BC040340|TNPO1|3842|transportin 1
hg19_v1_chr16_+_67840976_67841062	0.0208127	SOX2.p2	AF132730|TSNAXIP1|55815|translin-associated factor X interacting protein 1	AK303841|TSNAXIP1|55815|translin-associated factor X interacting protein 1	BC050693|TSNAXIP1|55815|translin-associated factor X interacting protein 1	AK302300|TSNAXIP1|55815|translin-associated factor X interacting protein 1	AK301920|TSNAXIP1|55815|translin-associated factor X interacting protein 1	NM_018430|TSNAXIP1|55815|translin-associated factor X interacting protein 1	BC111018|TSNAXIP1|55815|translin-associated factor X interacting protein 1	BC035320|TSNAXIP1|55815|translin-associated factor X interacting protein 1	AK027245|TSNAXIP1|55815|translin-associated factor X interacting protein 1
hg19_v1_chr14_+_70078309_70078312	0.0207407	SOX2.p2	AK309302|KIAA0247|9766|KIAA0247	NM_014734|KIAA0247|9766|KIAA0247	BC064697|KIAA0247|9766|KIAA0247
hg19_v1_chrX_-_19688991_19689121	0.0207305	SOX2.p2	AK293237|SH3KBP1|30011|SH3-domain kinase binding protein 1	NM_001184960|SH3KBP1|30011|SH3-domain kinase binding protein 1
hg19_v1_chr6_+_25963398_25963419	0.0206907	SOX2.p2	CR936707|TRIM38|10475|tripartite motif containing 38
hg19_v1_chr12_-_102455793_102455930	0.0206825	SOX2.p2	AK314970|CCDC53|51019|coiled-coil domain containing 53	AK223339|CCDC53|51019|coiled-coil domain containing 53	AF151874|CCDC53|51019|coiled-coil domain containing 53	AF155655|CCDC53|51019|coiled-coil domain containing 53	NM_016053|CCDC53|51019|coiled-coil domain containing 53
hg19_v1_chr3_+_126423037_126423118	0.020611	SOX2.p2	AK311056|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6	AK310910|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6	BC006123|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6	NM_032343|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6
hg19_v1_chr8_-_42623928_42623928	0.0204887	SOX2.p2	NM_001199279|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6	NM_004198|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6
hg19_v1_chr13_+_34392205_34392250	0.0204215	SOX2.p2	NM_002915|RFC3|5983|replication factor C (activator 1) 3, 38kDa	NM_181558|RFC3|5983|replication factor C (activator 1) 3, 38kDa
hg19_v1_chr17_-_39942937_39943029	0.0202724	SOX2.p2	AK226051|JUP|3728|junction plakoglobin	M23410|JUP|3728|junction plakoglobin	Z68228|JUP|3728|junction plakoglobin	BC000441|JUP|3728|junction plakoglobin	NM_002230|JUP|3728|junction plakoglobin	NM_021991|JUP|3728|junction plakoglobin
hg19_v1_chr4_-_99851785_99851787	0.0202316	SOX2.p2	NM_001130679|EIF4E|1977|eukaryotic translation initiation factor 4E	NM_001968|EIF4E|1977|eukaryotic translation initiation factor 4E	BC035166|EIF4E|1977|eukaryotic translation initiation factor 4E
hg19_v1_chr2_-_192711923_192712020	0.0201917	SOX2.p2	AK290378|SDPR|8436|serum deprivation response	NM_004657|SDPR|8436|serum deprivation response
hg19_v1_chr6_-_90062610_90062965	0.0201617	SOX2.p2	NM_016021|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U
hg19_v1_chr7_-_55930444_55930481	0.0199894	SOX2.p2	AK301928|SEPT14|346288|septin 14	NM_207366|SEPT14|346288|septin 14
hg19_v1_chr15_-_42840910_42840991	0.0199683	SOX2.p2	BX538324|LRRC57|255252|leucine rich repeat containing 57	BC051262|LRRC57|255252|leucine rich repeat containing 57	BC058935|LRRC57|255252|leucine rich repeat containing 57	AK094131|LRRC57|255252|leucine rich repeat containing 57	CR749223|LRRC57|255252|leucine rich repeat containing 57	AK309861|LRRC57|255252|leucine rich repeat containing 57
hg19_v1_chr10_-_104262404_104262511	0.0198931	SOX2.p2	AM393135|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	DQ892689|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	DQ895934|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	BC026016|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	BC000693|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	Z14978|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	X82206|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK302072|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK312506|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK297362|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK297620|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	NM_005736|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
hg19_v1_chr14_+_21152735_21152817	0.0198825	SOX2.p2	AK313989|ANG|283|angiogenin, ribonuclease, RNase A family, 5	BC015520|RNASE4|6038|ribonuclease, RNase A family, 4	BC054880|ANG|283|angiogenin, ribonuclease, RNase A family, 5	BX248010|RNASE4|6038|ribonuclease, RNase A family, 4
hg19_v1_chr17_+_4613931_4614025	0.0198244	SOX2.p2	BC007427|ARRB2|409|arrestin, beta 2	BC067368|ARRB2|409|arrestin, beta 2	AF106941|ARRB2|409|arrestin, beta 2	CR749218|ARRB2|409|arrestin, beta 2	AB209786|ARRB2|409|arrestin, beta 2	AK290951|ARRB2|409|arrestin, beta 2	AK297181|ARRB2|409|arrestin, beta 2	BC095450|ARRB2|409|arrestin, beta 2	DQ893226|ARRB2|409|arrestin, beta 2	DQ896556|ARRB2|409|arrestin, beta 2	EU176778|ARRB2|409|arrestin, beta 2	CR450310|ARRB2|409|arrestin, beta 2	DQ664180|ARRB2|409|arrestin, beta 2	EU883572|ARRB2|409|arrestin, beta 2	Z11501|ARRB2|409|arrestin, beta 2	BC039066|ARRB2|409|arrestin, beta 2
hg19_v1_chr3_+_127771287_127771305	0.0197822	SOX2.p2	AL832821|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)	BC002951|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)	AF077032|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)	AF084458|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)
hg19_v1_chr16_-_67217825_67217899	0.0197511	SOX2.p2	AL834156|KIAA0895L|653319|KIAA0895-like	NM_001040715|KIAA0895L|653319|KIAA0895-like
hg19_v1_chr16_-_75590107_75590225	0.0197336	SOX2.p2	AK096650|TMEM231|79583|transmembrane protein 231	NM_001077416|TMEM231|79583|transmembrane protein 231	BC010609|TMEM231|79583|transmembrane protein 231	AK307263|TMEM231|79583|transmembrane protein 231	AK025820|TMEM231|79583|transmembrane protein 231	BC063677|TMEM231|79583|transmembrane protein 231	AY358612|TMEM231|79583|transmembrane protein 231	AK290483|TMEM231|79583|transmembrane protein 231	NM_001077418|TMEM231|79583|transmembrane protein 231	NM_001077419|TMEM231|79583|transmembrane protein 231
hg19_v1_chr6_+_80714321_80714383	0.0197058	SOX2.p2	NM_001166691|TTK|7272|TTK protein kinase	NM_003318|TTK|7272|TTK protein kinase	AX775733|TTK|7272|TTK protein kinase	BC032858|TTK|7272|TTK protein kinase	BC000633|TTK|7272|TTK protein kinase	AK292460|TTK|7272|TTK protein kinase
hg19_v1_chr9_-_120177326_120177342	0.0196916	SOX2.p2	BX649176|ASTN2|23245|astrotactin 2
hg19_v1_chr2_-_18770776_18770845	0.0196373	SOX2.p2	AF356185|NT5C1B|93034|5'-nucleotidase, cytosolic IB	BC141842|NT5C1B|93034|5'-nucleotidase, cytosolic IB	AK302200|NT5C1B|93034|5'-nucleotidase, cytosolic IB	BC136387|NT5C1B|93034|5'-nucleotidase, cytosolic IB	BC171761|NT5C1B|93034|5'-nucleotidase, cytosolic IB	AF417165|NT5C1B|93034|5'-nucleotidase, cytosolic IB	BC026076|NT5C1B|93034|5'-nucleotidase, cytosolic IB	AK302084|NT5C1B|93034|5'-nucleotidase, cytosolic IB	AK057444|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough	AK302795|NT5C1B|93034|5'-nucleotidase, cytosolic IB	AK307653|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough	AK097422|NT5C1B|93034|5'-nucleotidase, cytosolic IB	AK093464|NT5C1B|93034|5'-nucleotidase, cytosolic IB	NM_001002006|NT5C1B|93034|5'-nucleotidase, cytosolic IB	NM_001199086|NT5C1B|93034|5'-nucleotidase, cytosolic IB	NM_001199087|NT5C1B|93034|5'-nucleotidase, cytosolic IB	NM_001199088|NT5C1B|93034|5'-nucleotidase, cytosolic IB	NM_001199103|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough	NM_001199104|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough	NM_033253|NT5C1B|93034|5'-nucleotidase, cytosolic IB
hg19_v1_chr9_-_86595167_86595183	0.0196105	SOX2.p2	NM_031263|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K
hg19_v1_chr21_-_27423423_27423464	0.019605	SOX2.p2	
hg19_v1_chr4_-_120549827_120549980	0.0194853	SOX2.p2	AM393036|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AM393270|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AM393448|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AK290189|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	BC126233|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AJ004865|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AF155192|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AF043731|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	NM_001083|PDE5A|8654|phosphodiesterase 5A, cGMP-specific
hg19_v1_chr3_-_17741511_17741511	0.0194681	SOX2.p2	AK310539|TBC1D5|9779|TBC1 domain family, member 5	NM_001134381|TBC1D5|9779|TBC1 domain family, member 5
hg19_v1_chr2_-_202507348_202507439	0.0194569	SOX2.p2	AK090601|TMEM237|65062|transmembrane protein 237	BC029611|TMEM237|65062|transmembrane protein 237	NM_152388|TMEM237|65062|transmembrane protein 237
hg19_v1_chr1_+_173684136_173684231	0.0194496	SOX2.p2	AB026190|KLHL20|27252|kelch-like 20 (Drosophila)	BC063418|KLHL20|27252|kelch-like 20 (Drosophila)
hg19_v1_chr4_-_54424366_54424390	0.0193459	SOX2.p2	AF237782|LNX1|84708|ligand of numb-protein X 1	AK294611|LNX1|84708|ligand of numb-protein X 1
hg19_v1_chr2_+_39893021_39893114	0.0193423	SOX2.p2	NM_152390|TMEM178|130733|transmembrane protein 178	AK075440|TMEM178|130733|transmembrane protein 178	BC029530|TMEM178|130733|transmembrane protein 178	AY358773|TMEM178|130733|transmembrane protein 178	DQ890996|TMEM178|130733|transmembrane protein 178
hg19_v1_chr3_+_4535030_4535033	0.0193294	SOX2.p2	NM_001099952|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1	NM_001168272|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1	NM_002222|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1	AK311008|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1
hg19_v1_chr6_+_33168602_33168725	0.0193066	SOX2.p2	NM_001077516|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	NM_006979|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	AK301126|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	AK303158|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	BC000645|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	AK225282|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	AK225682|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	D82060|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7
hg19_v1_chr12_-_7079828_7079923	0.0193011	SOX2.p2	AK298217|PHB2|11331|prohibitin 2	AK301316|PHB2|11331|prohibitin 2	AF126021|PHB2|11331|prohibitin 2	NM_007273|PHB2|11331|prohibitin 2	BC110322|PHB2|11331|prohibitin 2	NM_001144831|PHB2|11331|prohibitin 2
hg19_v1_chr2_-_45838383_45838432	0.0192474	SOX2.p2	AK056536|SRBD1|55133|S1 RNA binding domain 1	NM_018079|SRBD1|55133|S1 RNA binding domain 1
hg19_v1_chr2_+_219646448_219646500	0.0192298	SOX2.p2	AK226039|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	NM_000784|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	BC017044|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1
hg19_v1_chr6_-_35656610_35656630	0.0192082	SOX2.p2	HM245391|FKBP5|2289|FK506 binding protein 5	AB209893|FKBP5|2289|FK506 binding protein 5
hg19_v1_chr1_+_201709051_201709079	0.019156	SOX2.p2	BC069250|NAV1|89796|neuron navigator 1
hg19_v1_chr20_+_62152101_62152166	0.0191139	SOX2.p2	BC002531|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)	NM_024299|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)	AK024699|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)
hg19_v1_chr12_+_45609891_45609924	0.0190326	SOX2.p2	BC098410|ANO6|196527|anoctamin 6
hg19_v1_chr19_-_17375522_17375572	0.0189894	SOX2.p2	AB026290|USHBP1|83878|Usher syndrome 1C binding protein 1	AB040046|USHBP1|83878|Usher syndrome 1C binding protein 1	AK300617|USHBP1|83878|Usher syndrome 1C binding protein 1	AK096028|USHBP1|83878|Usher syndrome 1C binding protein 1	BC027910|USHBP1|83878|Usher syndrome 1C binding protein 1	NM_031941|USHBP1|83878|Usher syndrome 1C binding protein 1	AK315239|USHBP1|83878|Usher syndrome 1C binding protein 1	AK292031|USHBP1|83878|Usher syndrome 1C binding protein 1
hg19_v1_chr16_-_57481270_57481439	0.0189083	SOX2.p2	AK074263|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC002568|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AK292281|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AL136613|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC071740|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC024196|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AF248964|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	NM_020313|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC067303|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1
hg19_v1_chr17_-_79478236_79478585	0.0189077	SOX2.p2	BC009544|ACTG1|71|actin, gamma 1	BC010417|ACTG1|71|actin, gamma 1	BC018861|ACTG1|71|actin, gamma 1	M16247|ACTG1|71|actin, gamma 1
hg19_v1_chr1_+_6845381_6845601	0.0188751	SOX2.p2	AB020640|CAMTA1|23261|calmodulin binding transcription activator 1	BC151835|CAMTA1|23261|calmodulin binding transcription activator 1	NM_001195563|CAMTA1|23261|calmodulin binding transcription activator 1	NM_001242701|CAMTA1|23261|calmodulin binding transcription activator 1	NM_015215|CAMTA1|23261|calmodulin binding transcription activator 1	BC116457|CAMTA1|23261|calmodulin binding transcription activator 1
hg19_v1_chr10_+_111969988_111969988	0.0188707	SOX2.p2	BC012907|MXI1|4601|MAX interactor 1	NM_001008541|MXI1|4601|MAX interactor 1
hg19_v1_chr13_-_50018143_50018220	0.0188013	SOX2.p2	AY211923|CAB39L|81617|calcium binding protein 39-like	AY288977|CAB39L|81617|calcium binding protein 39-like	BX647518|CAB39L|81617|calcium binding protein 39-like	NM_001079670|CAB39L|81617|calcium binding protein 39-like
hg19_v1_chr14_+_39649711_39649842	0.0187564	SOX2.p2	AK304622|PNN|5411|pinin, desmosome associated protein
hg19_v1_chr8_+_70405027_70405051	0.0187122	SOX2.p2	NM_001128205|SULF1|23213|sulfatase 1	NM_001128206|SULF1|23213|sulfatase 1
hg19_v1_chr15_-_34610928_34611028	0.0187068	SOX2.p2	BC126241|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6	BC126243|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6	AF108831|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6	AK315283|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6	NM_005135|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6
hg19_v1_chr14_+_21152335_21152371	0.018673	SOX2.p2	FJ236304|ANG|283|angiogenin, ribonuclease, RNase A family, 5	NM_001145|ANG|283|angiogenin, ribonuclease, RNase A family, 5	AK092422|RNASE4|6038|ribonuclease, RNase A family, 4	NM_002937|RNASE4|6038|ribonuclease, RNase A family, 4
hg19_v1_chr14_-_31676826_31677045	0.0186526	SOX2.p2	
hg19_v1_chr5_-_96478438_96478446	0.0186403	SOX2.p2	BC036467|LIX1|167410|Lix1 homolog (chicken)
hg19_v1_chr2_+_190649109_190649291	0.0186349	SOX2.p2	BC036376|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC008410|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK295602|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK308311|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC084548|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AY540751|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK297440|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096330|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096331|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096332|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK316215|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK304634|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)
hg19_v1_chr20_+_1246959_1246998	0.0186134	SOX2.p2	BC035788|SNPH|9751|syntaphilin	NM_014723|SNPH|9751|syntaphilin	AB002372|SNPH|9751|syntaphilin	AF187733|SNPH|9751|syntaphilin
hg19_v1_chr3_-_124930192_124930242	0.0186075	SOX2.p2	AF345197|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	HQ258349|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	BC126158|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	BC126160|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	AF390442|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	NM_001195483|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8
hg19_v1_chr14_+_57857261_57857305	0.0185898	SOX2.p2	AK296372|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit	AK092674|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit	NM_001011713|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit	AK304257|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit	AK307348|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit
hg19_v1_chr6_-_89927495_89927495	0.0185781	SOX2.p2	AK313609|GABRR1|2569|gamma-aminobutyric acid (GABA) receptor, rho 1	NM_002042|GABRR1|2569|gamma-aminobutyric acid (GABA) receptor, rho 1
hg19_v1_chr6_+_3259185_3259293	0.0184504	SOX2.p2	AK126623|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4	AK095683|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4
hg19_v1_chr14_+_20923705_20923804	0.0184379	SOX2.p2	BT007236|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BT020133|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	DQ891814|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	DQ894998|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1
hg19_v1_chr5_+_121647385_121647440	0.018405	SOX2.p2	AK299687|SNCAIP|9627|synuclein, alpha interacting protein
hg19_v1_chr3_+_178866124_178866352	0.0183866	SOX2.p2	NM_006218|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide	AK292940|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide
hg19_v1_chr9_+_4662285_4662337	0.0183798	SOX2.p2	BC038108|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2	NM_203453|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2	AK074672|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2	AK128369|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2
hg19_v1_chr10_+_35484054_35484117	0.0183601	SOX2.p2	D14826|CREM|1390|cAMP responsive element modulator	NM_182717|CREM|1390|cAMP responsive element modulator	NM_182718|CREM|1390|cAMP responsive element modulator	NM_182719|CREM|1390|cAMP responsive element modulator	NM_182720|CREM|1390|cAMP responsive element modulator	AK290612|CREM|1390|cAMP responsive element modulator	AF069065|CREM|1390|cAMP responsive element modulator	U44836|CREM|1390|cAMP responsive element modulator
hg19_v1_chr2_-_207024103_207024242	0.0182589	SOX2.p2	X61100|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK098395|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	BC018900|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	BC022368|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK300585|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	BC030833|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK295705|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK295966|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK298320|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	BC004133|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	NM_001199981|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	NM_001199982|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	NM_001199983|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	NM_005006|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)
hg19_v1_chr18_-_21017816_21017926	0.018195	SOX2.p2	AK303553|TMEM241|85019|transmembrane protein 241	BC114510|TMEM241|85019|transmembrane protein 241	BC114561|TMEM241|85019|transmembrane protein 241	AK294916|TMEM241|85019|transmembrane protein 241	AK123623|TMEM241|85019|transmembrane protein 241	AK126247|TMEM241|85019|transmembrane protein 241	NM_032933|TMEM241|85019|transmembrane protein 241
hg19_v1_chr20_-_2641476_2641596	0.0181653	SOX2.p2	AL050094|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta
hg19_v1_chr15_-_65670325_65670377	0.018113	SOX2.p2	BC042054|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3	BC067107|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3	NM_004884|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3
hg19_v1_chr12_-_7079616_7079827	0.0180951	SOX2.p2	DQ891808|PHB2|11331|prohibitin 2	EU176626|PHB2|11331|prohibitin 2	BC014766|PHB2|11331|prohibitin 2	BC013228|PHB2|11331|prohibitin 2	AF178980|PHB2|11331|prohibitin 2	AF150962|PHB2|11331|prohibitin 2
hg19_v1_chr10_-_79397470_79397502	0.0180575	SOX2.p2	U13913|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	BC137115|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	BC137137|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	BC144496|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1
hg19_v1_chr12_+_122242580_122242643	0.0180084	SOX2.p2	NM_015048|SETD1B|23067|SET domain containing 1B	JF813787|SETD1B|23067|SET domain containing 1B
hg19_v1_chr7_+_39663199_39663224	0.0178305	SOX2.p2	BC039858|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)
hg19_v1_chr11_-_64545933_64545956	0.0177892	SOX2.p2	BC038446|SF1|7536|splicing factor 1	NM_001178030|SF1|7536|splicing factor 1
hg19_v1_chr15_+_76629101_76629223	0.0177183	SOX2.p2	AB593133|ISL2|64843|ISL LIM homeobox 2	AK001022|ISL2|64843|ISL LIM homeobox 2	BC012136|ISL2|64843|ISL LIM homeobox 2	NM_145805|ISL2|64843|ISL LIM homeobox 2	BC011967|ISL2|64843|ISL LIM homeobox 2	EU446846|ISL2|64843|ISL LIM homeobox 2
hg19_v1_chr21_-_16437125_16437309	0.0176833	SOX2.p2	AK289786|NRIP1|8204|nuclear receptor interacting protein 1	NM_003489|NRIP1|8204|nuclear receptor interacting protein 1
hg19_v1_chr22_-_31741761_31741970	0.0176832	SOX2.p2	AK291803|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	BC021091|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1
hg19_v1_chr11_-_64546201_64546315	0.0176748	SOX2.p2	L49345|SF1|7536|splicing factor 1	L49380|SF1|7536|splicing factor 1	BC032676|SF1|7536|splicing factor 1	BC020217|SF1|7536|splicing factor 1	BC069273|SF1|7536|splicing factor 1	D26120|SF1|7536|splicing factor 1	D26121|SF1|7536|splicing factor 1	AK301803|SF1|7536|splicing factor 1	BC034451|SF1|7536|splicing factor 1	NM_004630|SF1|7536|splicing factor 1	NM_201995|SF1|7536|splicing factor 1	NM_201997|SF1|7536|splicing factor 1	NM_201998|SF1|7536|splicing factor 1
hg19_v1_chrX_+_71364033_71364033	0.0176657	SOX2.p2	AK126598|FLJ44635|392490|TPT1-like protein	AY572224|FLJ44635|392490|TPT1-like protein	NM_207422|FLJ44635|392490|TPT1-like protein
hg19_v1_chr6_-_88299666_88299690	0.0176579	SOX2.p2	AF143874|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	BC105784|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	AK315669|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial
hg19_v1_chr15_-_59665065_59665067	0.0175994	SOX2.p2	AK291688|MYO1E|4643|myosin IE
hg19_v1_chr1_-_200379165_200379223	0.0175851	SOX2.p2	BC060820|ZNF281|23528|zinc finger protein 281	NM_012482|ZNF281|23528|zinc finger protein 281	AK027284|ZNF281|23528|zinc finger protein 281
hg19_v1_chr21_+_38739193_38739299	0.017546	SOX2.p2	AB015282|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A
hg19_v1_chr7_-_99699030_99699045	0.0174803	SOX2.p2	D55716|MCM7|4176|minichromosome maintenance complex component 7
hg19_v1_chr11_+_71498497_71498717	0.0174419	SOX2.p2	NM_001099653|FAM86C1|55199|family with sequence similarity 86, member C1	NM_018172|FAM86C1|55199|family with sequence similarity 86, member C1	NM_152563|FAM86C1|55199|family with sequence similarity 86, member C1	AK130709|FAM86C1|55199|family with sequence similarity 86, member C1	AK311675|FAM86C1|55199|family with sequence similarity 86, member C1	AK311518|FAM86C1|55199|family with sequence similarity 86, member C1	BC032519|FAM86C1|55199|family with sequence similarity 86, member C1	AK001523|FAM86C1|55199|family with sequence similarity 86, member C1	AK293221|FAM86C1|55199|family with sequence similarity 86, member C1	AK311428|FAM86C1|55199|family with sequence similarity 86, member C1	AK315454|FAM86C1|55199|family with sequence similarity 86, member C1
hg19_v1_chr16_-_15835382_15835512	0.0174416	SOX2.p2	D10667|MYH11|4629|myosin, heavy chain 11, smooth muscle
hg19_v1_chrX_-_130423034_130423034	0.0173749	SOX2.p2	BC028312|IGSF1|3547|immunoglobulin superfamily, member 1	NM_001170963|IGSF1|3547|immunoglobulin superfamily, member 1
hg19_v1_chr12_-_71148383_71148538	0.0173291	SOX2.p2	BC092469|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	NM_130846|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	U77916|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BX571751|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	AK304457|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	AK304672|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	NM_001207016|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg19_v1_chr7_-_99698993_99699029	0.0172854	SOX2.p2	BC013375|MCM7|4176|minichromosome maintenance complex component 7	D86748|MCM7|4176|minichromosome maintenance complex component 7	AK096959|MCM7|4176|minichromosome maintenance complex component 7	AK314575|MCM7|4176|minichromosome maintenance complex component 7
hg19_v1_chr22_+_20105076_20105093	0.0172597	SOX2.p2	AK293502|RANBP1|5902|RAN binding protein 1	BC071998|RANBP1|5902|RAN binding protein 1
hg19_v1_chr11_+_69455884_69455937	0.0171871	SOX2.p2	AK299044|CCND1|595|cyclin D1	AK313136|CCND1|595|cyclin D1	X59798|CCND1|595|cyclin D1	BC025302|CCND1|595|cyclin D1	M74092|CCND1|595|cyclin D1	M64349|CCND1|595|cyclin D1
hg19_v1_chr9_-_37465384_37465406	0.0171225	SOX2.p2	AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5	NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5
hg19_v1_chr16_+_2588021_2588049	0.0171118	SOX2.p2	AK131060|PDPK1|5170|3-phosphoinositide dependent protein kinase-1	AK222581|PDPK1|5170|3-phosphoinositide dependent protein kinase-1	AK293900|PDPK1|5170|3-phosphoinositide dependent protein kinase-1	AF017995|PDPK1|5170|3-phosphoinositide dependent protein kinase-1	Y15056|PDPK1|5170|3-phosphoinositide dependent protein kinase-1
hg19_v1_chr2_+_190648810_190648810	0.0170539	SOX2.p2	NM_000534|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	NM_001128143|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	NM_001128144|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)
hg19_v1_chr1_+_100316530_100316598	0.0169914	SOX2.p2	NM_000646|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84011|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	AB208867|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
hg19_v1_chr12_+_66582914_66583002	0.0169585	SOX2.p2	BC029493|IRAK3|11213|interleukin-1 receptor-associated kinase 3	NM_001142523|IRAK3|11213|interleukin-1 receptor-associated kinase 3	NM_007199|IRAK3|11213|interleukin-1 receptor-associated kinase 3	BC047399|IRAK3|11213|interleukin-1 receptor-associated kinase 3	AK314040|IRAK3|11213|interleukin-1 receptor-associated kinase 3	BC057800|IRAK3|11213|interleukin-1 receptor-associated kinase 3
hg19_v1_chr20_+_1099216_1099490	0.0167408	SOX2.p2	NM_006814|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)	AK098612|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)	AK294134|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)	D88378|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)	HQ258165|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)	AK300667|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)
hg19_v1_chr8_-_103876390_103876400	0.0166834	SOX2.p2	BC042404|AZIN1|51582|antizyme inhibitor 1	NM_015878|AZIN1|51582|antizyme inhibitor 1	NM_148174|AZIN1|51582|antizyme inhibitor 1
hg19_v1_chr11_+_66278076_66278157	0.0166621	SOX2.p2	AK095638|BBS1|582|Bardet-Biedl syndrome 1	BX647612|BBS1|582|Bardet-Biedl syndrome 1	AK294962|BBS1|582|Bardet-Biedl syndrome 1	AK302657|BBS1|582|Bardet-Biedl syndrome 1	AK296311|BBS1|582|Bardet-Biedl syndrome 1	BC047642|BBS1|582|Bardet-Biedl syndrome 1	AF503941|BBS1|582|Bardet-Biedl syndrome 1	NM_024649|BBS1|582|Bardet-Biedl syndrome 1	BC109064|BBS1|582|Bardet-Biedl syndrome 1	BC109065|BBS1|582|Bardet-Biedl syndrome 1
hg19_v1_chr11_-_61129352_61129360	0.0166452	SOX2.p2	AK075559|CYBASC3|220002|cytochrome b, ascorbate dependent 3
hg19_v1_chr1_+_245133283_245133441	0.0166262	SOX2.p2	AK090927|EFCAB2|84288|EF-hand calcium binding domain 2
hg19_v1_chr9_+_35829375_35829581	0.0166029	SOX2.p2	BC064951|TMEM8B|51754|transmembrane protein 8B	NM_001042590|TMEM8B|51754|transmembrane protein 8B	BC082765|TMEM8B|51754|transmembrane protein 8B
hg19_v1_chr6_-_100016517_100016689	0.0165801	SOX2.p2	BC010135|CCNC|892|cyclin C	AK298558|CCNC|892|cyclin C	BC041123|CCNC|892|cyclin C	NM_001013399|CCNC|892|cyclin C	NM_005190|CCNC|892|cyclin C
hg19_v1_chr9_-_88969256_88969322	0.0165767	SOX2.p2	BC032456|ZCCHC6|79670|zinc finger, CCHC domain containing 6
hg19_v1_chr17_-_55927377_55927432	0.0163904	SOX2.p2	AF151896|MRPS23|51649|mitochondrial ribosomal protein S23	AF161447|MRPS23|51649|mitochondrial ribosomal protein S23	AK312729|MRPS23|51649|mitochondrial ribosomal protein S23	BC000242|MRPS23|51649|mitochondrial ribosomal protein S23	NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23
hg19_v1_chr10_+_85899184_85899331	0.0163855	SOX2.p2	NM_014394|GHITM|27069|growth hormone inducible transmembrane protein	AK299937|GHITM|27069|growth hormone inducible transmembrane protein	AF078863|GHITM|27069|growth hormone inducible transmembrane protein	AF131820|GHITM|27069|growth hormone inducible transmembrane protein	AL136713|GHITM|27069|growth hormone inducible transmembrane protein	AF161400|GHITM|27069|growth hormone inducible transmembrane protein	AK130094|GHITM|27069|growth hormone inducible transmembrane protein	BC022872|GHITM|27069|growth hormone inducible transmembrane protein	AK225318|GHITM|27069|growth hormone inducible transmembrane protein	AF060923|GHITM|27069|growth hormone inducible transmembrane protein	AK098770|GHITM|27069|growth hormone inducible transmembrane protein	AK298332|GHITM|27069|growth hormone inducible transmembrane protein	BC010354|GHITM|27069|growth hormone inducible transmembrane protein	AK130097|GHITM|27069|growth hormone inducible transmembrane protein	AK297960|GHITM|27069|growth hormone inducible transmembrane protein	AK292864|GHITM|27069|growth hormone inducible transmembrane protein	AY358824|GHITM|27069|growth hormone inducible transmembrane protein
hg19_v1_chr19_+_45281125_45281187	0.0163758	SOX2.p2	AF117646|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	AF117647|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	NM_001130852|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	NM_012116|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	AB028645|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	BC028915|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	DQ891243|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	DQ894493|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c
hg19_v1_chr21_-_37948866_37948866	0.0163699	SOX2.p2	AJ566766|CLDN14|23562|claudin 14	NM_001146077|CLDN14|23562|claudin 14
hg19_v1_chr2_+_191014971_191014971	0.0163083	SOX2.p2	NM_001042520|C2orf88|84281|chromosome 2 open reading frame 88
hg19_v1_chr9_+_97521930_97522065	0.0160748	SOX2.p2	NM_001193329|C9orf3|84909|chromosome 9 open reading frame 3	AJ560639|C9orf3|84909|chromosome 9 open reading frame 3
hg19_v1_chr7_+_116502529_116502585	0.0160629	SOX2.p2	NM_006136|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg19_v1_chr20_-_17511973_17512012	0.0160508	SOX2.p2	AF039655|BFSP1|631|beaded filament structural protein 1, filensin	Y16717|BFSP1|631|beaded filament structural protein 1, filensin	NM_001195|BFSP1|631|beaded filament structural protein 1, filensin
hg19_v1_chr10_+_7745325_7745339	0.0160194	SOX2.p2	AK225329|ITIH2|3698|inter-alpha-trypsin inhibitor heavy chain 2	AK297334|ITIH2|3698|inter-alpha-trypsin inhibitor heavy chain 2	X07173|ITIH2|3698|inter-alpha-trypsin inhibitor heavy chain 2
hg19_v1_chr2_-_3605926_3605958	0.0159073	SOX2.p2	AF039652|RNASEH1|246243|ribonuclease H1	NM_002936|RNASEH1|246243|ribonuclease H1
hg19_v1_chr10_-_73848309_73848372	0.0158777	SOX2.p2	AJ001453|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2
hg19_v1_chr5_+_137688386_137688484	0.0158717	SOX2.p2	BC146788|KDM3B|51780|lysine (K)-specific demethylase 3B	AB029005|KDM3B|51780|lysine (K)-specific demethylase 3B
hg19_v1_chr5_-_150537335_150537442	0.0158598	SOX2.p2	NM_001155|ANXA6|309|annexin A6
hg19_v1_chr3_-_129158849_129158894	0.015833	SOX2.p2	AF532602|MBD4|8930|methyl-CpG binding domain protein 4	AF072250|MBD4|8930|methyl-CpG binding domain protein 4	NM_003925|MBD4|8930|methyl-CpG binding domain protein 4	AK303013|MBD4|8930|methyl-CpG binding domain protein 4
hg19_v1_chr10_+_127408083_127408144	0.0157863	SOX2.p2	BC026172|C10orf137|26098|chromosome 10 open reading frame 137	NM_001202438|C10orf137|26098|chromosome 10 open reading frame 137	NM_015608|C10orf137|26098|chromosome 10 open reading frame 137	BC028715|C10orf137|26098|chromosome 10 open reading frame 137	BC105929|C10orf137|26098|chromosome 10 open reading frame 137	BC107479|C10orf137|26098|chromosome 10 open reading frame 137
hg19_v1_chr8_-_103876345_103876374	0.015748	SOX2.p2	AK095493|AZIN1|51582|antizyme inhibitor 1	D88674|AZIN1|51582|antizyme inhibitor 1	BC013420|AZIN1|51582|antizyme inhibitor 1	BC019279|AZIN1|51582|antizyme inhibitor 1
hg19_v1_chr1_-_247171329_247171334	0.0156395	SOX2.p2	BC041082|ZNF695|57116|zinc finger protein 695
hg19_v1_chr15_-_59665069_59665072	0.0155891	SOX2.p2	BC098392|MYO1E|4643|myosin IE	NM_004998|MYO1E|4643|myosin IE	U14391|MYO1E|4643|myosin IE
hg19_v1_chr20_-_55100980_55100980	0.015557	SOX2.p2	AK131203|GCNT7|140687|glucosaminyl (N-acetyl) transferase family member 7	NM_080615|GCNT7|140687|glucosaminyl (N-acetyl) transferase family member 7
hg19_v1_chr1_-_1624145_1624171	0.015538	SOX2.p2	BC092507|SLC35E2B|728661|solute carrier family 35, member E2B	AK125619|SLC35E2B|728661|solute carrier family 35, member E2B
hg19_v1_chr2_-_25194484_25194607	0.0155211	SOX2.p2	AK294726|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27
hg19_v1_chr15_+_74218794_74218809	0.0155102	SOX2.p2	BC068542|LOXL1|4016|lysyl oxidase-like 1	AK303982|LOXL1|4016|lysyl oxidase-like 1	AK314222|LOXL1|4016|lysyl oxidase-like 1
hg19_v1_chr17_-_5372060_5372149	0.0154831	SOX2.p2	BC030017|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33	AK295074|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33
hg19_v1_chr7_+_2598611_2598644	0.0154464	SOX2.p2	BC071858|IQCE|23288|IQ motif containing E	NM_001100390|IQCE|23288|IQ motif containing E	NM_152558|IQCE|23288|IQ motif containing E
hg19_v1_chr5_-_150138554_150138656	0.0154281	SOX2.p2	DQ892339|DCTN4|51164|dynactin 4 (p62)	DQ895544|DCTN4|51164|dynactin 4 (p62)	AF195120|DCTN4|51164|dynactin 4 (p62)	AK000299|DCTN4|51164|dynactin 4 (p62)	AK296787|DCTN4|51164|dynactin 4 (p62)	BC026323|DCTN4|51164|dynactin 4 (p62)	AK311693|DCTN4|51164|dynactin 4 (p62)	AK307757|DCTN4|51164|dynactin 4 (p62)	NM_001135643|DCTN4|51164|dynactin 4 (p62)	NM_016221|DCTN4|51164|dynactin 4 (p62)
hg19_v1_chr19_-_2015628_2015713	0.0153861	SOX2.p2	AF355797|BTBD2|55643|BTB (POZ) domain containing 2	NM_017797|BTBD2|55643|BTB (POZ) domain containing 2	AK225831|BTBD2|55643|BTB (POZ) domain containing 2
hg19_v1_chr2_-_100721792_100722044	0.0153632	SOX2.p2	NM_001025108|AFF3|3899|AF4/FMR2 family, member 3
hg19_v1_chr10_-_123734641_123734702	0.0153113	SOX2.p2	
hg19_v1_chr12_-_120907514_120907527	0.0153032	SOX2.p2	AK294254|SRSF9|8683|serine/arginine-rich splicing factor 9
hg19_v1_chr8_+_23104120_23104150	0.015301	SOX2.p2	AK315664|CHMP7|91782|charged multivesicular body protein 7	AK021776|CHMP7|91782|charged multivesicular body protein 7
hg19_v1_chr5_+_99871234_99871306	0.0152674	SOX2.p2	AF529367|FAM174A|345757|family with sequence similarity 174, member A
hg19_v1_chr1_-_226186987_226187017	0.0151403	SOX2.p2	BC016290|C1orf55|163859|chromosome 1 open reading frame 55
hg19_v1_chr3_+_61547882_61548071	0.0151213	SOX2.p2	L09247|PTPRG|5793|protein tyrosine phosphatase, receptor type, G
hg19_v1_chr7_-_28998028_28998036	0.0149086	SOX2.p2	NM_014817|TRIL|9865|TLR4 interactor with leucine-rich repeats
hg19_v1_chr17_-_79980685_79980777	0.0149052	SOX2.p2	BC011610|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)	U95006|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)	U95007|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)	BC009571|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)	NM_144998|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)
hg19_v1_chr14_-_61115906_61116274	0.0148962	SOX2.p2	BT007083|SIX1|6495|SIX homeobox 1	BC008874|SIX1|6495|SIX homeobox 1	NM_005982|SIX1|6495|SIX homeobox 1	X91868|SIX1|6495|SIX homeobox 1
hg19_v1_chr14_+_37131064_37131105	0.014831	SOX2.p2	BC001159|PAX9|5083|paired box 9
hg19_v1_chr12_-_48119224_48119354	0.0147833	SOX2.p2	AK314688|ENDOU|8909|endonuclease, polyU-specific	BC069715|ENDOU|8909|endonuclease, polyU-specific	BC069698|ENDOU|8909|endonuclease, polyU-specific	BC074763|ENDOU|8909|endonuclease, polyU-specific	AX772808|ENDOU|8909|endonuclease, polyU-specific	AK300169|ENDOU|8909|endonuclease, polyU-specific	AK075446|ENDOU|8909|endonuclease, polyU-specific	BC111782|ENDOU|8909|endonuclease, polyU-specific	M32402|ENDOU|8909|endonuclease, polyU-specific	M36109|ENDOU|8909|endonuclease, polyU-specific	NM_001172439|ENDOU|8909|endonuclease, polyU-specific	NM_001172440|ENDOU|8909|endonuclease, polyU-specific	NM_006025|ENDOU|8909|endonuclease, polyU-specific
hg19_v1_chr19_+_18263967_18263995	0.0147272	SOX2.p2	
hg19_v1_chr10_-_73848278_73848286	0.014611	SOX2.p2	AY358921|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2
hg19_v1_chr4_-_40517913_40518003	0.0145911	SOX2.p2	AK000280|RBM47|54502|RNA binding motif protein 47	NM_019027|RBM47|54502|RNA binding motif protein 47
hg19_v1_chr19_+_41699140_41699186	0.0145768	SOX2.p2	AK296087|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1	BC033691|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1	AF335278|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1	DQ893363|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1	DQ896681|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1
hg19_v1_chr4_+_144435076_144435153	0.0145552	SOX2.p2	
hg19_v1_chr7_+_129932973_129933019	0.014498	SOX2.p2	AK290993|CPA4|51200|carboxypeptidase A4	NM_001163446|CPA4|51200|carboxypeptidase A4	NM_016352|CPA4|51200|carboxypeptidase A4	BC052289|CPA4|51200|carboxypeptidase A4	AK310933|CPA4|51200|carboxypeptidase A4	AK298553|CPA4|51200|carboxypeptidase A4	AK298550|CPA4|51200|carboxypeptidase A4	AK299023|CPA4|51200|carboxypeptidase A4	AY358699|CPA4|51200|carboxypeptidase A4	AF095719|CPA4|51200|carboxypeptidase A4	HQ448429|CPA4|51200|carboxypeptidase A4
hg19_v1_chr3_-_119963141_119963141	0.0144925	SOX2.p2	NM_001168271|GPR156|165829|G protein-coupled receptor 156	NM_153002|GPR156|165829|G protein-coupled receptor 156
hg19_v1_chr22_+_29279573_29279981	0.0144589	SOX2.p2	NM_001206998|ZNRF3|84133|zinc and ring finger 3	AB051436|ZNRF3|84133|zinc and ring finger 3	CR456397|ZNRF3|84133|zinc and ring finger 3
hg19_v1_chr4_+_1723233_1723303	0.0144291	SOX2.p2	AK302463|TACC3|10460|transforming, acidic coiled-coil containing protein 3	AK225631|TACC3|10460|transforming, acidic coiled-coil containing protein 3	BC106071|TACC3|10460|transforming, acidic coiled-coil containing protein 3	AF093543|TACC3|10460|transforming, acidic coiled-coil containing protein 3	AF479620|TACC3|10460|transforming, acidic coiled-coil containing protein 3	AJ243997|TACC3|10460|transforming, acidic coiled-coil containing protein 3	BC111771|TACC3|10460|transforming, acidic coiled-coil containing protein 3
hg19_v1_chr12_+_57522247_57522318	0.0144058	SOX2.p2	BC052593|LRP1|4035|low density lipoprotein receptor-related protein 1	BC072015|LRP1|4035|low density lipoprotein receptor-related protein 1	NM_002332|LRP1|4035|low density lipoprotein receptor-related protein 1	X13916|LRP1|4035|low density lipoprotein receptor-related protein 1
hg19_v1_chr13_+_111855406_111855439	0.0144017	SOX2.p2	AK300272|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7
hg19_v1_chr10_-_123687380_123687671	0.0143659	SOX2.p2	AK296356|ATE1|11101|arginyltransferase 1	AF079098|ATE1|11101|arginyltransferase 1	AF079099|ATE1|11101|arginyltransferase 1	AK303604|ATE1|11101|arginyltransferase 1	AK313057|ATE1|11101|arginyltransferase 1	BC022026|ATE1|11101|arginyltransferase 1	NM_001001976|ATE1|11101|arginyltransferase 1	NM_007041|ATE1|11101|arginyltransferase 1
hg19_v1_chr17_+_44101549_44101592	0.014182	SOX2.p2	AB073354|MAPT|4137|microtubule-associated protein tau
hg19_v1_chr1_-_115053677_115053743	0.0140973	SOX2.p2	AB029036|TRIM33|51592|tripartite motif containing 33
hg19_v1_chr9_-_95087619_95087632	0.0140404	SOX2.p2	CR627363|NOL8|55035|nucleolar protein 8	BC008491|NOL8|55035|nucleolar protein 8	AK001049|NOL8|55035|nucleolar protein 8	AK307408|NOL8|55035|nucleolar protein 8	BC146810|NOL8|55035|nucleolar protein 8	AK297355|NOL8|55035|nucleolar protein 8
hg19_v1_chr7_-_150924220_150924330	0.0140357	SOX2.p2	BC001661|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	AF261092|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	AF261091|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	NM_005692|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	NM_007189|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2
hg19_v1_chr8_+_11660179_11660189	0.0140198	SOX2.p2	NM_004462|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1
hg19_v1_chr1_-_173991506_173991524	0.0139415	SOX2.p2	
hg19_v1_chr17_-_982210_982240	0.0139053	SOX2.p2	AK299909|ABR|29|active BCR-related gene
hg19_v1_chr10_-_64028457_64028621	0.0137103	SOX2.p2	AY150309|RTKN2|219790|rhotekin 2	BC025765|RTKN2|219790|rhotekin 2	NM_145307|RTKN2|219790|rhotekin 2	BC141821|RTKN2|219790|rhotekin 2	BC142725|RTKN2|219790|rhotekin 2
hg19_v1_chr1_+_29063443_29063632	0.0136702	SOX2.p2	AK303833|YTHDF2|51441|YTH domain family, member 2	NM_001172828|YTHDF2|51441|YTH domain family, member 2	AF432214|YTHDF2|51441|YTH domain family, member 2	AF155095|YTHDF2|51441|YTH domain family, member 2	AF192968|YTHDF2|51441|YTH domain family, member 2	DQ892157|YTHDF2|51441|YTH domain family, member 2	DQ895352|YTHDF2|51441|YTH domain family, member 2	AB451335|YTHDF2|51441|YTH domain family, member 2	AB451484|YTHDF2|51441|YTH domain family, member 2
hg19_v1_chr8_-_124054540_124054541	0.0136506	SOX2.p2	AY358818|DERL1|79139|Der1-like domain family, member 1	AK303826|DERL1|79139|Der1-like domain family, member 1
hg19_v1_chr11_-_3013522_3013529	0.0136258	SOX2.p2	AK299515|NAP1L4|4676|nucleosome assembly protein 1-like 4
hg19_v1_chr20_-_34241830_34241830	0.0135591	SOX2.p2	NM_003915|CPNE1|8904|copine I
hg19_v1_chr17_-_47439326_47439834	0.0135266	SOX2.p2	CR933680|ZNF652|22834|zinc finger protein 652	BC034987|ZNF652|22834|zinc finger protein 652	AK292667|ZNF652|22834|zinc finger protein 652	NM_001145365|ZNF652|22834|zinc finger protein 652	AB023141|ZNF652|22834|zinc finger protein 652	BC152440|ZNF652|22834|zinc finger protein 652	NM_014897|ZNF652|22834|zinc finger protein 652
hg19_v1_chr12_-_58146118_58146229	0.0135038	SOX2.p2	BC005864|CDK4|1019|cyclin-dependent kinase 4	AK310724|CDK4|1019|cyclin-dependent kinase 4	M14505|CDK4|1019|cyclin-dependent kinase 4	NM_000075|CDK4|1019|cyclin-dependent kinase 4
hg19_v1_chr14_-_89883306_89883515	0.0134927	SOX2.p2	BC007506|FOXN3|1112|forkhead box N3	NM_005197|FOXN3|1112|forkhead box N3
hg19_v1_chr12_-_46662709_46662777	0.0133716	SOX2.p2	BC010620|SLC38A1|81539|solute carrier family 38, member 1	BX648676|SLC38A1|81539|solute carrier family 38, member 1
hg19_v1_chr15_+_50647105_50647215	0.0133222	SOX2.p2	BC014238|LOC100129387|100129387|uncharacterized LOC100129387	BC004103|LOC100129387|100129387|uncharacterized LOC100129387
hg19_v1_chr6_-_10415438_10415499	0.0133179	SOX2.p2	BC071713|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	NM_003220|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
hg19_v1_chr8_-_53322200_53322441	0.0132666	SOX2.p2	AB011107|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)	AK311188|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)	BC031075|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)	NM_014682|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)
hg19_v1_chr18_-_22932109_22932217	0.0129893	SOX2.p2	AJ518106|ZNF521|25925|zinc finger protein 521	BC032869|ZNF521|25925|zinc finger protein 521	AK027354|ZNF521|25925|zinc finger protein 521	AK293067|ZNF521|25925|zinc finger protein 521	NM_015461|ZNF521|25925|zinc finger protein 521
hg19_v1_chr5_-_150284429_150284464	0.0128403	SOX2.p2	AK300528|ZNF300|91975|zinc finger protein 300
hg19_v1_chr9_-_126030792_126030848	0.0127929	SOX2.p2	AL833947|STRBP|55342|spermatid perinuclear RNA binding protein	AL834150|STRBP|55342|spermatid perinuclear RNA binding protein	BC017732|STRBP|55342|spermatid perinuclear RNA binding protein	NM_018387|STRBP|55342|spermatid perinuclear RNA binding protein
hg19_v1_chr3_+_184038445_184038482	0.0127802	SOX2.p2	BC082764|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg19_v1_chr8_+_90770201_90770368	0.0127316	SOX2.p2	AY524045|RIPK2|8767|receptor-interacting serine-threonine kinase 2	AF078530|RIPK2|8767|receptor-interacting serine-threonine kinase 2	AY562996|RIPK2|8767|receptor-interacting serine-threonine kinase 2
hg19_v1_chr19_+_10713055_10713212	0.0127241	SOX2.p2	NM_001145056|SLC44A2|57153|solute carrier family 44, member 2	AK309801|SLC44A2|57153|solute carrier family 44, member 2	AK027519|SLC44A2|57153|solute carrier family 44, member 2
hg19_v1_chr10_+_60094712_60094961	0.0127009	SOX2.p2	NM_001204880|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	NM_003338|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	AK291901|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	BC005980|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	BC015997|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	AF257220|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	AJ272367|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	X78140|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	DQ893111|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	DQ896385|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	BT007041|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1
hg19_v1_chr11_-_61129462_61129839	0.0126719	SOX2.p2	BC014045|CYBASC3|220002|cytochrome b, ascorbate dependent 3	BC004391|CYBASC3|220002|cytochrome b, ascorbate dependent 3	AK056751|CYBASC3|220002|cytochrome b, ascorbate dependent 3	NM_001161454|CYBASC3|220002|cytochrome b, ascorbate dependent 3	NM_153611|CYBASC3|220002|cytochrome b, ascorbate dependent 3
hg19_v1_chr20_+_19870209_19870245	0.0126289	SOX2.p2	BC128065|RIN2|54453|Ras and Rab interactor 2	NM_018993|RIN2|54453|Ras and Rab interactor 2	AB060339|RIN2|54453|Ras and Rab interactor 2
hg19_v1_chr6_+_42531736_42531764	0.0125713	SOX2.p2	NM_001184801|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2	NM_015255|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2
hg19_v1_chr12_-_6740814_6740817	0.0125324	SOX2.p2	NM_001142961|LPAR5|57121|lysophosphatidic acid receptor 5
hg19_v1_chr11_-_27723061_27723179	0.0125258	SOX2.p2	AB038672|BDNF|627|brain-derived neurotrophic factor	AY054397|BDNF|627|brain-derived neurotrophic factor	BC029795|BDNF|627|brain-derived neurotrophic factor	EF674521|BDNF|627|brain-derived neurotrophic factor	NM_170733|BDNF|627|brain-derived neurotrophic factor
hg19_v1_chr7_+_150020548_150020604	0.0124721	SOX2.p2	BC001354|LRRC61|65999|leucine rich repeat containing 61
hg19_v1_chr2_-_232329064_232329207	0.0124645	SOX2.p2	AK000221|NCL|4691|nucleolin	AK091742|NCL|4691|nucleolin	AK095897|NCL|4691|nucleolin	AK122805|NCL|4691|nucleolin	NM_005381|NCL|4691|nucleolin	AK127608|NCL|4691|nucleolin
hg19_v1_chr7_+_39663140_39663193	0.0124282	SOX2.p2	NM_005402|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)
hg19_v1_chr19_+_21106058_21106115	0.0124106	SOX2.p2	NM_003429|ZNF85|7639|zinc finger protein 85	BC068066|ZNF85|7639|zinc finger protein 85	U35376|ZNF85|7639|zinc finger protein 85	M61866|ZNF85|7639|zinc finger protein 85	BC008688|ZNF85|7639|zinc finger protein 85
hg19_v1_chr19_-_44100127_44100298	0.0123943	SOX2.p2	NM_001007561|IRGQ|126298|immunity-related GTPase family, Q
hg19_v1_chr1_-_25747276_25747404	0.0123824	SOX2.p2	AB018644|RHCE|6006|Rh blood group, CcEe antigens	AB018645|RHCE|6006|Rh blood group, CcEe antigens	AB030388|RHCE|6006|Rh blood group, CcEe antigens	AB049753|RHCE|6006|Rh blood group, CcEe antigens	AF056965|RHCE|6006|Rh blood group, CcEe antigens	AF177938|RHD|6007|Rh blood group, D antigen	AM295498|RHCE|6006|Rh blood group, CcEe antigens	AM295506|RHCE|6006|Rh blood group, CcEe antigens	DQ178642|RHCE|6006|Rh blood group, CcEe antigens	DQ266353|RHCE|6006|Rh blood group, CcEe antigens	DQ266400|RHCE|6006|Rh blood group, CcEe antigens	DQ322275|RHCE|6006|Rh blood group, CcEe antigens	FR691748|RHCE|6006|Rh blood group, CcEe antigens	FR691750|RHCE|6006|Rh blood group, CcEe antigens	GU474431|RHCE|6006|Rh blood group, CcEe antigens	GU563377|RHCE|6006|Rh blood group, CcEe antigens	GU810838|RHCE|6006|Rh blood group, CcEe antigens	S57967|RHCE|6006|Rh blood group, CcEe antigens	X63096|RHCE|6006|Rh blood group, CcEe antigens	X63095|RHCE|6006|Rh blood group, CcEe antigens	AY603478|RHCE|6006|Rh blood group, CcEe antigens	X63098|RHCE|6006|Rh blood group, CcEe antigens	Z97026|RHD|6007|Rh blood group, D antigen	BC075081|RHCE|6006|Rh blood group, CcEe antigens	M34015|RHCE|6006|Rh blood group, CcEe antigens	AF510065|RHCE|6006|Rh blood group, CcEe antigens	AF510066|RHCE|6006|Rh blood group, CcEe antigens	AF510067|RHCE|6006|Rh blood group, CcEe antigens	AF510068|RHCE|6006|Rh blood group, CcEe antigens	X54534|RHCE|6006|Rh blood group, CcEe antigens	NM_020485|RHCE|6006|Rh blood group, CcEe antigens	NM_138616|RHCE|6006|Rh blood group, CcEe antigens	NM_138617|RHCE|6006|Rh blood group, CcEe antigens	NM_138618|RHCE|6006|Rh blood group, CcEe antigens	BC139905|RHCE|6006|Rh blood group, CcEe antigens
hg19_v1_chr8_+_99956630_99956685	0.0123812	SOX2.p2	NM_001142462|OSR2|116039|odd-skipped related 2 (Drosophila)	NM_053001|OSR2|116039|odd-skipped related 2 (Drosophila)	AK074518|OSR2|116039|odd-skipped related 2 (Drosophila)	AK291491|OSR2|116039|odd-skipped related 2 (Drosophila)	AK310994|OSR2|116039|odd-skipped related 2 (Drosophila)	BC016936|OSR2|116039|odd-skipped related 2 (Drosophila)	AY038073|OSR2|116039|odd-skipped related 2 (Drosophila)
hg19_v1_chr3_-_183735617_183735765	0.0122943	SOX2.p2	BC142670|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	BC142719|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	U83661|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AF104942|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AY754874|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AY754875|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AY754876|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AB209454|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	BC051358|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	NM_001023587|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	NM_005688|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
hg19_v1_chr3_-_57583153_57583228	0.0122726	SOX2.p2	NM_001660|ARF4|378|ADP-ribosylation factor 4
hg19_v1_chr14_+_60712469_60712474	0.012263	SOX2.p2	AK097843|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A	NM_177952|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A	AK313337|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A
hg19_v1_chr6_+_42531767_42531787	0.0122398	SOX2.p2	BC024217|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2	BC064512|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2
hg19_v1_chr18_-_33709204_33709379	0.0122274	SOX2.p2	U41060|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6	AK304079|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6	AK301539|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6	BC039498|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6	NM_001099406|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6	NM_012319|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6
hg19_v1_chr3_-_165555252_165555283	0.012221	SOX2.p2	NM_000055|BCHE|590|butyrylcholinesterase
hg19_v1_chr4_+_1723212_1723223	0.0121945	SOX2.p2	NM_006342|TACC3|10460|transforming, acidic coiled-coil containing protein 3
hg19_v1_chr19_+_21324826_21324887	0.0121835	SOX2.p2	BX647597|ZNF431|170959|zinc finger protein 431	AK308127|ZNF431|170959|zinc finger protein 431	NM_133473|ZNF431|170959|zinc finger protein 431	AK293072|ZNF431|170959|zinc finger protein 431	AB075849|ZNF431|170959|zinc finger protein 431	BC040506|ZNF431|170959|zinc finger protein 431
hg19_v1_chr18_-_44702647_44702731	0.0121752	SOX2.p2	CR533488|IER3IP1|51124|immediate early response 3 interacting protein 1	DQ892866|IER3IP1|51124|immediate early response 3 interacting protein 1	DQ896115|IER3IP1|51124|immediate early response 3 interacting protein 1	EU831653|IER3IP1|51124|immediate early response 3 interacting protein 1	EU831736|IER3IP1|51124|immediate early response 3 interacting protein 1	BC017391|IER3IP1|51124|immediate early response 3 interacting protein 1	BC010888|IER3IP1|51124|immediate early response 3 interacting protein 1	AF164798|IER3IP1|51124|immediate early response 3 interacting protein 1	AF371963|IER3IP1|51124|immediate early response 3 interacting protein 1	AF125100|IER3IP1|51124|immediate early response 3 interacting protein 1	AL136667|IER3IP1|51124|immediate early response 3 interacting protein 1
hg19_v1_chr6_-_146056896_146057158	0.0121589	SOX2.p2	AF284580|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)	NM_001018041|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)	NM_005670|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)	AF454491|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)	AK299497|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)
hg19_v1_chr12_+_7079943_7080075	0.0120908	SOX2.p2	NM_006331|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	BC055314|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	AK298207|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)
hg19_v1_chr3_+_193310997_193311138	0.0120892	SOX2.p2	BC043443|OPA1|4976|optic atrophy 1 (autosomal dominant)	BC075805|OPA1|4976|optic atrophy 1 (autosomal dominant)	AB011139|OPA1|4976|optic atrophy 1 (autosomal dominant)
hg19_v1_chr13_-_33780142_33780186	0.0119089	SOX2.p2	AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13
hg19_v1_chr19_+_19626535_19626595	0.0117236	SOX2.p2	AF261134|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13
hg19_v1_chr14_-_31676680_31676690	0.0117126	SOX2.p2	NM_015382|HECTD1|25831|HECT domain containing 1
hg19_v1_chr15_+_74218811_74218819	0.0116822	SOX2.p2	BC015090|LOXL1|4016|lysyl oxidase-like 1	L21186|LOXL1|4016|lysyl oxidase-like 1
hg19_v1_chr18_+_11851388_11851510	0.0116703	SOX2.p2	NM_020412|CHMP1B|57132|charged multivesicular body protein 1B	AK314068|CHMP1B|57132|charged multivesicular body protein 1B	BC065933|CHMP1B|57132|charged multivesicular body protein 1B	BC012733|CHMP1B|57132|charged multivesicular body protein 1B	AF281064|CHMP1B|57132|charged multivesicular body protein 1B
hg19_v1_chr15_+_65822842_65823005	0.0115478	SOX2.p2	BC011443|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AK027421|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC000194|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AJ271091|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1
hg19_v1_chr6_+_42981955_42981958	0.0114004	SOX2.p2	BC012987|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr12_-_57704245_57704245	0.0113945	SOX2.p2	NM_014925|R3HDM2|22864|R3H domain containing 2
hg19_v1_chr17_-_26926044_26926071	0.0113882	SOX2.p2	AK292398|SPAG5|10615|sperm associated antigen 5	NM_006461|SPAG5|10615|sperm associated antigen 5
hg19_v1_chr17_-_61819165_61819329	0.0113476	SOX2.p2	AF308302|STRADA|92335|STE20-related kinase adaptor alpha	AK074771|STRADA|92335|STE20-related kinase adaptor alpha	AK293160|STRADA|92335|STE20-related kinase adaptor alpha	AY290821|STRADA|92335|STE20-related kinase adaptor alpha	NM_001003786|STRADA|92335|STE20-related kinase adaptor alpha	NM_001003787|STRADA|92335|STE20-related kinase adaptor alpha	NM_001003788|STRADA|92335|STE20-related kinase adaptor alpha	NM_001165969|STRADA|92335|STE20-related kinase adaptor alpha	NM_001165970|STRADA|92335|STE20-related kinase adaptor alpha	NM_153335|STRADA|92335|STE20-related kinase adaptor alpha
hg19_v1_chr17_+_30677178_30677185	0.0113287	SOX2.p2	AK298950|ZNF207|7756|zinc finger protein 207	AK226172|ZNF207|7756|zinc finger protein 207
hg19_v1_chr19_+_50016490_50016498	0.0113249	SOX2.p2	BC008734|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha
hg19_v1_chr11_-_62473502_62473890	0.011236	SOX2.p2	BC041640|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	BC012140|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	BC004911|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	AK075317|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	AK225029|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	AK027524|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	NM_001130702|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	NM_032667|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)
hg19_v1_chr20_+_32319765_32319827	0.0111181	SOX2.p2	BC132873|ZNF341|84905|zinc finger protein 341	BC144188|ZNF341|84905|zinc finger protein 341	BC157823|ZNF341|84905|zinc finger protein 341	BC146811|ZNF341|84905|zinc finger protein 341	BC094738|ZNF341|84905|zinc finger protein 341	NM_032819|ZNF341|84905|zinc finger protein 341	BC063492|ZNF341|84905|zinc finger protein 341	BC040440|ZNF341|84905|zinc finger protein 341	HQ258664|ZNF341|84905|zinc finger protein 341
hg19_v1_chr13_-_45150391_45150470	0.011055	SOX2.p2	AK091854|TSC22D1|8848|TSC22 domain family, member 1	BC136475|TSC22D1|8848|TSC22 domain family, member 1	BC136482|TSC22D1|8848|TSC22 domain family, member 1
hg19_v1_chr20_-_40246991_40247132	0.0110249	SOX2.p2	BC039860|CHD6|84181|chromodomain helicase DNA binding protein 6	BC040016|CHD6|84181|chromodomain helicase DNA binding protein 6	AK296955|CHD6|84181|chromodomain helicase DNA binding protein 6	BC012516|CHD6|84181|chromodomain helicase DNA binding protein 6	AY034072|CHD6|84181|chromodomain helicase DNA binding protein 6	NM_032221|CHD6|84181|chromodomain helicase DNA binding protein 6
hg19_v1_chr22_+_39077960_39077974	0.0110174	SOX2.p2	AK024731|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	AB041906|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	AF163256|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	AB040119|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)
hg19_v1_chr21_-_27543445_27543445	0.0108436	SOX2.p2	AK296229|APP|351|amyloid beta (A4) precursor protein	NM_001136131|APP|351|amyloid beta (A4) precursor protein
hg19_v1_chr3_+_73046081_73046159	0.0108076	SOX2.p2	AF327345|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	NM_174907|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	BC128136|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	BC128137|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2
hg19_v1_chr10_-_73848263_73848274	0.0107601	SOX2.p2	AK292328|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2	AK294008|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2	AK307091|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2
hg19_v1_chr12_-_120907411_120907497	0.0107446	SOX2.p2	U30825|SRSF9|8683|serine/arginine-rich splicing factor 9	BC093971|SRSF9|8683|serine/arginine-rich splicing factor 9	BC093973|SRSF9|8683|serine/arginine-rich splicing factor 9	AK290644|SRSF9|8683|serine/arginine-rich splicing factor 9
hg19_v1_chr8_+_107460151_107460151	0.0107202	SOX2.p2	AK296561|OXR1|55074|oxidation resistance 1	NM_001198532|OXR1|55074|oxidation resistance 1
hg19_v1_chr16_+_1832928_1832990	0.0106419	SOX2.p2	AK093593|NUBP2|10101|nucleotide binding protein 2	NM_012225|NUBP2|10101|nucleotide binding protein 2	BC008005|NUBP2|10101|nucleotide binding protein 2	AK001023|NUBP2|10101|nucleotide binding protein 2	AF118394|NUBP2|10101|nucleotide binding protein 2	BC002768|NUBP2|10101|nucleotide binding protein 2	BX648907|NUBP2|10101|nucleotide binding protein 2	AK315611|NUBP2|10101|nucleotide binding protein 2	AK300696|NUBP2|10101|nucleotide binding protein 2
hg19_v1_chr2_+_86947570_86947789	0.0106389	SOX2.p2	BC012165|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)	EU831470|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)	EU831557|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
hg19_v1_chr1_+_220267418_220267487	0.0106142	SOX2.p2	AY267462|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial	NM_018060|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial	BC137438|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial
hg19_v1_chr20_+_20348744_20348764	0.0105498	SOX2.p2	M93119|INSM1|3642|insulinoma-associated 1	NM_002196|INSM1|3642|insulinoma-associated 1
hg19_v1_chr5_+_61602236_61602304	0.0105189	SOX2.p2	AK297347|KIF2A|3796|kinesin heavy chain member 2A	AK307880|KIF2A|3796|kinesin heavy chain member 2A	EF560716|KIF2A|3796|kinesin heavy chain member 2A	EF560728|KIF2A|3796|kinesin heavy chain member 2A	EU832810|KIF2A|3796|kinesin heavy chain member 2A	GQ129246|KIF2A|3796|kinesin heavy chain member 2A	AK315866|KIF2A|3796|kinesin heavy chain member 2A
hg19_v1_chr22_+_29168628_29168661	0.0104712	SOX2.p2	AK289516|CCDC117|150275|coiled-coil domain containing 117	NM_173510|CCDC117|150275|coiled-coil domain containing 117
hg19_v1_chr12_-_121785652_121785683	0.0104157	SOX2.p2	BC034243|ANAPC5|51433|anaphase promoting complex subunit 5
hg19_v1_chr10_-_118765087_118765138	0.0104157	SOX2.p2	NM_001127211|KIAA1598|57698|KIAA1598	NM_018330|KIAA1598|57698|KIAA1598	AK091381|KIAA1598|57698|KIAA1598
hg19_v1_chr5_-_150284390_150284406	0.0104048	SOX2.p2	AF395541|ZNF300|91975|zinc finger protein 300
hg19_v1_chr3_+_14444062_14444076	0.0102997	SOX2.p2	AK303649|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6
hg19_v1_chr5_-_83016850_83017019	0.0102935	SOX2.p2	AK313713|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	NM_001884|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	X17405|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	X78076|HAPLN1|1404|hyaluronan and proteoglycan link protein 1
hg19_v1_chr2_+_185463292_185463319	0.010215	SOX2.p2	BC142612|ZNF804A|91752|zinc finger protein 804A
hg19_v1_chr1_+_185703470_185703682	0.0101542	SOX2.p2	AF156100|HMCN1|83872|hemicentin 1	NM_031935|HMCN1|83872|hemicentin 1
hg19_v1_chr1_+_192127591_192127616	0.0101107	SOX2.p2	NM_130782|RGS18|64407|regulator of G-protein signaling 18	AK292015|RGS18|64407|regulator of G-protein signaling 18	BC020632|RGS18|64407|regulator of G-protein signaling 18	AK057114|RGS18|64407|regulator of G-protein signaling 18	AK315377|RGS18|64407|regulator of G-protein signaling 18	AF268036|RGS18|64407|regulator of G-protein signaling 18	AF076642|RGS18|64407|regulator of G-protein signaling 18
hg19_v1_chr20_+_58179601_58179708	0.0100927	SOX2.p2	BC108303|PHACTR3|116154|phosphatase and actin regulator 3	AJ311122|PHACTR3|116154|phosphatase and actin regulator 3	NM_080672|PHACTR3|116154|phosphatase and actin regulator 3	BC117362|PHACTR3|116154|phosphatase and actin regulator 3	BC117364|PHACTR3|116154|phosphatase and actin regulator 3
hg19_v1_chr3_-_64009094_64009206	0.0100552	SOX2.p2	AF530062|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	BC000630|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	AK095059|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	AY568086|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	D14663|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	NM_014814|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	BC012369|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	BC000904|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	AK290205|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	BX647742|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	AF215935|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6
hg19_v1_chrX_-_100872926_100872990	0.00996614	SOX2.p2	BC007677|ARMCX6|54470|armadillo repeat containing, X-linked 6	NM_001009584|ARMCX6|54470|armadillo repeat containing, X-linked 6	NM_001184768|ARMCX6|54470|armadillo repeat containing, X-linked 6	NM_019007|ARMCX6|54470|armadillo repeat containing, X-linked 6
hg19_v1_chr6_+_111279762_111279898	0.00993715	SOX2.p2	AF361492|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa	AF361496|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa	NM_138408|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa	BC104655|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa
hg19_v1_chr9_-_88969323_88969424	0.0099189	SOX2.p2	AL832193|ZCCHC6|79670|zinc finger, CCHC domain containing 6	CR936608|ZCCHC6|79670|zinc finger, CCHC domain containing 6	AK055546|ZCCHC6|79670|zinc finger, CCHC domain containing 6	CR933644|ZCCHC6|79670|zinc finger, CCHC domain containing 6	AL832026|ZCCHC6|79670|zinc finger, CCHC domain containing 6	BX641077|ZCCHC6|79670|zinc finger, CCHC domain containing 6	CR933643|ZCCHC6|79670|zinc finger, CCHC domain containing 6	BC111003|ZCCHC6|79670|zinc finger, CCHC domain containing 6	NM_001185059|ZCCHC6|79670|zinc finger, CCHC domain containing 6	NM_001185074|ZCCHC6|79670|zinc finger, CCHC domain containing 6	NM_024617|ZCCHC6|79670|zinc finger, CCHC domain containing 6
hg19_v1_chr10_-_105110898_105110906	0.00966054	SOX2.p2	AK309105|PCGF6|84108|polycomb group ring finger 6
hg19_v1_chr17_-_79828691_79828789	0.00965227	SOX2.p2	NM_001185077|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg19_v1_chr20_-_50384899_50384957	0.0095743	SOX2.p2	NM_006045|ATP9A|10079|ATPase, class II, type 9A
hg19_v1_chr10_-_105110844_105110876	0.00951665	SOX2.p2	AK290679|PCGF6|84108|polycomb group ring finger 6
hg19_v1_chr1_+_29063132_29063435	0.00950726	SOX2.p2	NM_001173128|YTHDF2|51441|YTH domain family, member 2	NM_016258|YTHDF2|51441|YTH domain family, member 2	BC002559|YTHDF2|51441|YTH domain family, member 2	AK292581|YTHDF2|51441|YTH domain family, member 2
hg19_v1_chr6_+_42981986_42981992	0.00950075	SOX2.p2	BC041793|KLHDC3|116138|kelch domain containing 3	BC045612|KLHDC3|116138|kelch domain containing 3	BC007296|KLHDC3|116138|kelch domain containing 3	BC009460|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr3_-_69037498_69037515	0.00937687	SOX2.p2	AK123213|C3orf64|285203|chromosome 3 open reading frame 64
hg19_v1_chrX_-_119602846_119603002	0.00936037	SOX2.p2	AK304405|LAMP2|3920|lysosomal-associated membrane protein 2
hg19_v1_chr12_+_7080077_7080078	0.00935128	SOX2.p2	AK291597|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)
hg19_v1_chr1_+_203764750_203764798	0.00929755	SOX2.p2	NM_014827|ZC3H11A|9877|zinc finger CCCH-type containing 11A	CR627439|ZC3H11A|9877|zinc finger CCCH-type containing 11A	AK095858|ZC3H11A|9877|zinc finger CCCH-type containing 11A
hg19_v1_chrX_+_41192650_41192650	0.00926471	SOX2.p2	AF000982|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AF000983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	NM_001193416|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	NM_001193417|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	NM_001356|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked
hg19_v1_chr9_-_95166827_95166980	0.00924126	SOX2.p2	AF086912|OGN|4969|osteoglycin	AF100758|OGN|4969|osteoglycin	NM_014057|OGN|4969|osteoglycin	NM_033014|OGN|4969|osteoglycin	AK289628|OGN|4969|osteoglycin	AK295433|OGN|4969|osteoglycin
hg19_v1_chr6_+_18387580_18387755	0.0092226	SOX2.p2	AK096832|RNF144B|255488|ring finger protein 144B	NM_182757|RNF144B|255488|ring finger protein 144B	AB076367|RNF144B|255488|ring finger protein 144B	BC063311|RNF144B|255488|ring finger protein 144B	AL832329|RNF144B|255488|ring finger protein 144B
hg19_v1_chr14_-_50100657_50100736	0.00919236	SOX2.p2	BC013322|DNAAF2|55172|dynein, axonemal, assembly factor 2	BX248264|DNAAF2|55172|dynein, axonemal, assembly factor 2	BC011400|DNAAF2|55172|dynein, axonemal, assembly factor 2	AK001425|DNAAF2|55172|dynein, axonemal, assembly factor 2
hg19_v1_chr17_-_26926015_26926038	0.00915717	SOX2.p2	BC000322|SPAG5|10615|sperm associated antigen 5	AF399910|SPAG5|10615|sperm associated antigen 5	AF063308|SPAG5|10615|sperm associated antigen 5
hg19_v1_chr5_+_138089118_138089145	0.00908873	SOX2.p2	AK094151|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	D13866|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	BC000385|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	AK304267|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg19_v1_chr4_-_88312221_88312322	0.00906023	SOX2.p2	AF273056|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	AY358553|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	BC014327|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	BC021673|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11
hg19_v1_chr10_-_116251582_116251632	0.00905988	SOX2.p2	
hg19_v1_chr18_-_44702732_44702734	0.00904909	SOX2.p2	AK027108|IER3IP1|51124|immediate early response 3 interacting protein 1
hg19_v1_chr14_+_75283664_75283737	0.00904676	SOX2.p2	BC023570|YLPM1|56252|YLP motif containing 1
hg19_v1_chr6_+_42531951_42532057	0.00902395	SOX2.p2	AY061884|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2
hg19_v1_chr7_+_116593354_116593417	0.00901771	SOX2.p2	BC075855|ST7|7982|suppression of tumorigenicity 7	NM_018412|ST7|7982|suppression of tumorigenicity 7	NM_021908|ST7|7982|suppression of tumorigenicity 7	AF234882|ST7|7982|suppression of tumorigenicity 7	AF234883|ST7|7982|suppression of tumorigenicity 7
hg19_v1_chr3_-_45267804_45267846	0.00895632	SOX2.p2	NM_015444|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)
hg19_v1_chr2_+_169312755_169312764	0.00893136	SOX2.p2	AK172775|CERS6|253782|ceramide synthase 6
hg19_v1_chr17_+_42264582_42264653	0.00880525	SOX2.p2	AF370373|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2
hg19_v1_chr22_+_39077953_39077957	0.00879604	SOX2.p2	NM_020243|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK223021|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)
hg19_v1_chr16_+_1728283_1728289	0.00874056	SOX2.p2	BC060853|HN1L|90861|hematological and neurological expressed 1-like
hg19_v1_chr20_-_31331374_31331396	0.00873968	SOX2.p2	BC047440|COMMD7|149951|COMM domain containing 7
hg19_v1_chr15_+_50647649_50647693	0.00873649	SOX2.p2	BX537481|LOC100129387|100129387|uncharacterized LOC100129387
hg19_v1_chr1_+_120254418_120254645	0.00863422	SOX2.p2	NM_006623|PHGDH|26227|phosphoglycerate dehydrogenase	AK315360|PHGDH|26227|phosphoglycerate dehydrogenase	BC011262|PHGDH|26227|phosphoglycerate dehydrogenase	AK309662|PHGDH|26227|phosphoglycerate dehydrogenase	AK310132|PHGDH|26227|phosphoglycerate dehydrogenase	AF171237|PHGDH|26227|phosphoglycerate dehydrogenase	BC000303|PHGDH|26227|phosphoglycerate dehydrogenase	BC001349|PHGDH|26227|phosphoglycerate dehydrogenase	BC023235|PHGDH|26227|phosphoglycerate dehydrogenase	DQ892073|PHGDH|26227|phosphoglycerate dehydrogenase	EU176546|PHGDH|26227|phosphoglycerate dehydrogenase	CR456795|PHGDH|26227|phosphoglycerate dehydrogenase
hg19_v1_chr17_+_18128868_18129009	0.0086041	SOX2.p2	BC028037|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)	NM_004140|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)	BC151838|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)	BC028214|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)	X86371|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)
hg19_v1_chr19_+_18263998_18264066	0.00858703	SOX2.p2	BC070082|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)	NM_005027|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)	BC090249|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)
hg19_v1_chr3_-_139258477_139258489	0.00858008	SOX2.p2	AK290315|RBP1|5947|retinol binding protein 1, cellular	M11433|RBP1|5947|retinol binding protein 1, cellular
hg19_v1_chrX_+_41193409_41193505	0.00856442	SOX2.p2	AK291153|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AK296906|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AK297159|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AK304689|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AK310891|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	BC055083|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AF086430|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	BC007668|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AF061337|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	BC011819|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AB208983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AB451220|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AB451343|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked
hg19_v1_chr15_+_31619043_31619633	0.00854637	SOX2.p2	AF132599|KLF13|51621|Kruppel-like factor 13	BC035503|KLF13|51621|Kruppel-like factor 13	NM_015995|KLF13|51621|Kruppel-like factor 13	BC010438|KLF13|51621|Kruppel-like factor 13	BC013946|KLF13|51621|Kruppel-like factor 13	BC012741|KLF13|51621|Kruppel-like factor 13	AF150628|KLF13|51621|Kruppel-like factor 13
hg19_v1_chr2_+_103353341_103353423	0.00853377	SOX2.p2	AL832688|TMEM182|130827|transmembrane protein 182	AK054856|TMEM182|130827|transmembrane protein 182	BC107694|TMEM182|130827|transmembrane protein 182	BC073844|TMEM182|130827|transmembrane protein 182
hg19_v1_chr10_-_105110890_105110897	0.00840365	SOX2.p2	BC010235|PCGF6|84108|polycomb group ring finger 6	NM_001011663|PCGF6|84108|polycomb group ring finger 6	NM_032154|PCGF6|84108|polycomb group ring finger 6
hg19_v1_chr15_+_74218962_74219120	0.00838575	SOX2.p2	DQ893331|LOXL1|4016|lysyl oxidase-like 1
hg19_v1_chr8_-_33370552_33370702	0.0083746	SOX2.p2	AK026916|TTI2|80185|TELO2 interacting protein 2	BX648410|TTI2|80185|TELO2 interacting protein 2	BC007387|TTI2|80185|TELO2 interacting protein 2	BC066935|TTI2|80185|TELO2 interacting protein 2	NM_025115|TTI2|80185|TELO2 interacting protein 2	NM_001102401|TTI2|80185|TELO2 interacting protein 2
hg19_v1_chr7_-_99699426_99699566	0.0082409	SOX2.p2	NM_005916|MCM7|4176|minichromosome maintenance complex component 7
hg19_v1_chr12_+_103981050_103981072	0.00823448	SOX2.p2	AY311388|STAB2|55576|stabilin 2	AJ295695|STAB2|55576|stabilin 2	NM_017564|STAB2|55576|stabilin 2	AB052958|STAB2|55576|stabilin 2
hg19_v1_chr2_+_207024330_207024468	0.00818389	SOX2.p2	S81522|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	X60656|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BC000211|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	X60489|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2
hg19_v1_chr1_+_111992105_111992127	0.0081705	SOX2.p2	BC005960|ATP5F1|515|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1	AY871272|ATP5F1|515|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1	AK313541|ATP5F1|515|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1	AK223018|ATP5F1|515|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
hg19_v1_chr5_+_109025135_109025155	0.00810223	SOX2.p2	NM_002372|MAN2A1|4124|mannosidase, alpha, class 2A, member 1
hg19_v1_chr4_-_113558120_113558150	0.00805948	SOX2.p2	AK302613|C4orf21|55345|chromosome 4 open reading frame 21	AK299831|C4orf21|55345|chromosome 4 open reading frame 21	NM_018392|C4orf21|55345|chromosome 4 open reading frame 21
hg19_v1_chr15_-_42840992_42841017	0.00799407	SOX2.p2	AK094891|LRRC57|255252|leucine rich repeat containing 57	NM_153260|LRRC57|255252|leucine rich repeat containing 57
hg19_v1_chr6_-_3227776_3227967	0.00784861	SOX2.p2	BT019930|TUBB2B|347733|tubulin, beta 2B class IIb	CR456788|TUBB2B|347733|tubulin, beta 2B class IIb	BC063610|TUBB2B|347733|tubulin, beta 2B class IIb	AK308806|TUBB2B|347733|tubulin, beta 2B class IIb	AK289433|TUBB2B|347733|tubulin, beta 2B class IIb	AK297568|TUBB2B|347733|tubulin, beta 2B class IIb	BC001352|TUBB2B|347733|tubulin, beta 2B class IIb	NM_178012|TUBB2B|347733|tubulin, beta 2B class IIb
hg19_v1_chr3_-_156272868_156272895	0.00781431	SOX2.p2	BT006669|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	DQ892572|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	DQ895788|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	AK304364|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	AK312935|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)
hg19_v1_chr11_-_35440514_35440909	0.00776335	SOX2.p2	AB209444|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	U03505|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	D85884|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	Z32517|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	AK298769|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	BC132768|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	AY066021|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v1_chr11_+_63753902_63753938	0.00776091	SOX2.p2	BC010368|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	BC107701|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AK303228|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AF161381|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AK225133|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AL096714|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AK091830|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	BC007519|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	AY177200|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1
hg19_v1_chr1_-_115269672_115269687	0.00772462	SOX2.p2	AK130392|CSDE1|7812|cold shock domain containing E1, RNA-binding
hg19_v1_chr5_+_109025046_109025083	0.00769388	SOX2.p2	BC031659|MAN2A1|4124|mannosidase, alpha, class 2A, member 1
hg19_v1_chr4_-_46995440_46995553	0.00768988	SOX2.p2	DQ891679|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4	DQ894864|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4	EU176605|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4	U30461|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4	NM_001204266|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4	NM_001204267|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4	BC035055|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4
hg19_v1_chr3_+_100211554_100211612	0.00758589	SOX2.p2	AK129789|TMEM45A|55076|transmembrane protein 45A
hg19_v1_chrX_-_49965657_49965663	0.00756339	SOX2.p2	AK292463|AKAP4|8852|A kinase (PRKA) anchor protein 4	BC126250|AKAP4|8852|A kinase (PRKA) anchor protein 4	BC126252|AKAP4|8852|A kinase (PRKA) anchor protein 4	NM_003886|AKAP4|8852|A kinase (PRKA) anchor protein 4	Y15195|AKAP4|8852|A kinase (PRKA) anchor protein 4
hg19_v1_chr15_-_37392358_37392755	0.00753304	SOX2.p2	AK056216|MEIS2|4212|Meis homeobox 2	NM_170674|MEIS2|4212|Meis homeobox 2	NM_170675|MEIS2|4212|Meis homeobox 2	NM_170676|MEIS2|4212|Meis homeobox 2	NM_170677|MEIS2|4212|Meis homeobox 2
hg19_v1_chr2_+_75059781_75059781	0.00717652	SOX2.p2	AF086198|HK2|3099|hexokinase 2	NM_000189|HK2|3099|hexokinase 2
hg19_v1_chrX_+_71401525_71401626	0.00716941	SOX2.p2	NM_001170747|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	NM_006223|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC093700|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC112281|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	HQ258728|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	AB009690|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC005234|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC070288|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC111394|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC104653|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	AK127605|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	AF143096|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)
hg19_v1_chr6_+_126070895_126070922	0.00713324	SOX2.p2	AF311884|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	BT020067|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	BT020068|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2
hg19_v1_chr12_-_109915093_109915122	0.00700986	SOX2.p2	AF113208|KCTD10|83892|potassium channel tetramerisation domain containing 10	BC040062|KCTD10|83892|potassium channel tetramerisation domain containing 10	AK056912|KCTD10|83892|potassium channel tetramerisation domain containing 10	AK222548|KCTD10|83892|potassium channel tetramerisation domain containing 10
hg19_v1_chr6_+_42982013_42982022	0.00696249	SOX2.p2	BC000295|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr16_-_686292_686373	0.00682256	SOX2.p2	AK294482|C16orf13|84326|chromosome 16 open reading frame 13	AK295628|C16orf13|84326|chromosome 16 open reading frame 13	BC047118|C16orf13|84326|chromosome 16 open reading frame 13	AK057077|C16orf13|84326|chromosome 16 open reading frame 13	BC007207|C16orf13|84326|chromosome 16 open reading frame 13	NM_001040160|C16orf13|84326|chromosome 16 open reading frame 13	NM_001040161|C16orf13|84326|chromosome 16 open reading frame 13	NM_001040162|C16orf13|84326|chromosome 16 open reading frame 13	NM_001040165|C16orf13|84326|chromosome 16 open reading frame 13	NM_032366|C16orf13|84326|chromosome 16 open reading frame 13
hg19_v1_chr10_-_123687936_123688064	0.00678574	SOX2.p2	AK299101|ATE1|11101|arginyltransferase 1	AK308926|ATE1|11101|arginyltransferase 1
hg19_v1_chr8_-_121823696_121823826	0.00671333	SOX2.p2	AF028828|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)
hg19_v1_chr6_+_42982002_42982011	0.00668846	SOX2.p2	BC021546|KLHDC3|116138|kelch domain containing 3	BC001789|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr12_+_48516428_48516562	0.00664723	SOX2.p2	D21861|PFKM|5213|phosphofructokinase, muscle	NM_001166687|PFKM|5213|phosphofructokinase, muscle	NM_001166688|PFKM|5213|phosphofructokinase, muscle	Y00698|PFKM|5213|phosphofructokinase, muscle	BC000534|PFKM|5213|phosphofructokinase, muscle	BC012799|PFKM|5213|phosphofructokinase, muscle	BC013298|PFKM|5213|phosphofructokinase, muscle	BC007798|PFKM|5213|phosphofructokinase, muscle
hg19_v1_chr21_-_36231794_36231878	0.00662999	SOX2.p2	S76350|RUNX1|861|runt-related transcription factor 1
hg19_v1_chr19_+_10791025_10791071	0.00657844	SOX2.p2	
hg19_v1_chrX_+_30261847_30261847	0.00656553	SOX2.p2	AK314977|MAGEB1|4112|melanoma antigen family B, 1	NM_002363|MAGEB1|4112|melanoma antigen family B, 1	NM_177415|MAGEB1|4112|melanoma antigen family B, 1	X82539|MAGEB1|4112|melanoma antigen family B, 1
hg19_v1_chr8_-_119123804_119124118	0.0065169	SOX2.p2	AK313129|EXT1|2131|exostosin 1	S79639|EXT1|2131|exostosin 1	NM_000127|EXT1|2131|exostosin 1
hg19_v1_chr16_+_2588000_2588020	0.00641078	SOX2.p2	BC006339|PDPK1|5170|3-phosphoinositide dependent protein kinase-1	BC012103|PDPK1|5170|3-phosphoinositide dependent protein kinase-1
hg19_v1_chr21_-_19775958_19775972	0.00636951	SOX2.p2	BC111749|TMPRSS15|5651|transmembrane protease, serine 15	NM_002772|TMPRSS15|5651|transmembrane protease, serine 15	U09860|TMPRSS15|5651|transmembrane protease, serine 15
hg19_v1_chr6_-_100016403_100016511	0.00626466	SOX2.p2	AB125137|CCNC|892|cyclin C	BC050726|CCNC|892|cyclin C	AK223247|CCNC|892|cyclin C	M74091|CCNC|892|cyclin C	AK291914|CCNC|892|cyclin C	AK222768|CCNC|892|cyclin C	BC026272|CCNC|892|cyclin C	BC030159|CCNC|892|cyclin C	BC056153|CCNC|892|cyclin C
hg19_v1_chr2_+_170590454_170590521	0.00624319	SOX2.p2	BC010437|KLHL23|151230|kelch-like 23 (Drosophila)
hg19_v1_chr15_+_74218786_74218792	0.00623597	SOX2.p2	NM_005576|LOXL1|4016|lysyl oxidase-like 1
hg19_v1_chr3_-_195270004_195270223	0.00612633	SOX2.p2	BC007655|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2	BC066921|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2	NM_006241|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2
hg19_v1_chr10_+_225932_225961	0.00606916	SOX2.p2	BC012586|ZMYND11|10771|zinc finger, MYND-type containing 11	X86098|ZMYND11|10771|zinc finger, MYND-type containing 11	NM_001202467|ZMYND11|10771|zinc finger, MYND-type containing 11	NM_001202468|ZMYND11|10771|zinc finger, MYND-type containing 11	DQ335452|ZMYND11|10771|zinc finger, MYND-type containing 11	DQ335453|ZMYND11|10771|zinc finger, MYND-type containing 11	DQ335454|ZMYND11|10771|zinc finger, MYND-type containing 11	DQ335455|ZMYND11|10771|zinc finger, MYND-type containing 11	AK296427|ZMYND11|10771|zinc finger, MYND-type containing 11
hg19_v1_chr20_-_14318200_14318312	0.00601026	SOX2.p2	AB040902|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	AF169677|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	BC020870|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	AK027297|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	AK074883|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	NM_013281|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	NM_198391|FLRT3|23767|fibronectin leucine rich transmembrane protein 3
hg19_v1_chr10_+_7745229_7745282	0.0059082	SOX2.p2	NM_002216|ITIH2|3698|inter-alpha-trypsin inhibitor heavy chain 2
hg19_v1_chr6_+_42981975_42981984	0.00590793	SOX2.p2	AB055925|KLHDC3|116138|kelch domain containing 3	AK290384|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr10_-_101190201_101190531	0.00582312	SOX2.p2	AK301916|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	AY513279|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	M37400|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	AF052153|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	BC000498|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	AK312684|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	AK293483|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	AK309174|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	NM_002079|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)
hg19_v1_chr6_-_127664511_127664535	0.00574246	SOX2.p2	AK303812|ECHDC1|55862|enoyl CoA hydratase domain containing 1
hg19_v1_chr11_-_66206260_66206313	0.00573151	SOX2.p2	BC108277|MRPL11|65003|mitochondrial ribosomal protein L11	AB049638|MRPL11|65003|mitochondrial ribosomal protein L11	AK290084|MRPL11|65003|mitochondrial ribosomal protein L11	AK223112|MRPL11|65003|mitochondrial ribosomal protein L11	BC005002|MRPL11|65003|mitochondrial ribosomal protein L11	AF151871|MRPL11|65003|mitochondrial ribosomal protein L11	NM_016050|MRPL11|65003|mitochondrial ribosomal protein L11	NM_170738|MRPL11|65003|mitochondrial ribosomal protein L11	NM_170739|MRPL11|65003|mitochondrial ribosomal protein L11
hg19_v1_chr20_-_31331196_31331311	0.00570141	SOX2.p2	AY542162|COMMD7|149951|COMM domain containing 7	BC000628|COMMD7|149951|COMM domain containing 7	AK097059|COMMD7|149951|COMM domain containing 7	AK027893|COMMD7|149951|COMM domain containing 7
hg19_v1_chr5_-_1344941_1345104	0.0056844	SOX2.p2	AB045223|CLPTM1L|81037|CLPTM1-like	DQ892147|CLPTM1L|81037|CLPTM1-like	DQ895343|CLPTM1L|81037|CLPTM1-like	AK027306|CLPTM1L|81037|CLPTM1-like	BC025305|CLPTM1L|81037|CLPTM1-like	NM_030782|CLPTM1L|81037|CLPTM1-like
hg19_v1_chr5_+_177631534_177631610	0.00568086	SOX2.p2	AK223425|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	BC004561|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	BC009359|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	BC001616|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	BC002625|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	BC015556|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	BC036708|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	M65028|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B
hg19_v1_chr5_+_95997723_95997779	0.00560757	SOX2.p2	NM_001190442|CAST|831|calpastatin	AB208816|CAST|831|calpastatin
hg19_v1_chr16_-_30545998_30546003	0.00555571	SOX2.p2	AK292192|ZNF747|65988|zinc finger protein 747
hg19_v1_chr5_+_92918924_92919042	0.00544582	SOX2.p2	BC017493|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	NM_005654|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1
hg19_v1_chr3_-_57326709_57326709	0.00539164	SOX2.p2	AL832472|ASB14|142686|ankyrin repeat and SOCS box containing 14	NM_001142733|ASB14|142686|ankyrin repeat and SOCS box containing 14
hg19_v1_chr10_+_122610853_122610937	0.00536021	SOX2.p2	BC040469|WDR11|55717|WD repeat domain 11	AB037772|WDR11|55717|WD repeat domain 11	AK299524|WDR11|55717|WD repeat domain 11	AF320223|WDR11|55717|WD repeat domain 11	AK301761|WDR11|55717|WD repeat domain 11	BC071564|WDR11|55717|WD repeat domain 11	AK315145|WDR11|55717|WD repeat domain 11
hg19_v1_chr6_+_148663953_148664027	0.00535155	SOX2.p2	AB018333|SASH1|23328|SAM and SH3 domain containing 1
hg19_v1_chr11_-_73881859_73882278	0.00517755	SOX2.p2	AB231764|C2CD3|26005|C2 calcium-dependent domain containing 3	AK092089|C2CD3|26005|C2 calcium-dependent domain containing 3	NM_015531|C2CD3|26005|C2 calcium-dependent domain containing 3
hg19_v1_chrM_+_6138_7079	0.00515696	SOX2.p2	
hg19_v1_chr18_-_22930826_22931470	0.00515564	SOX2.p2	
hg19_v1_chr17_+_77030471_77030574	0.0051319	SOX2.p2	AF329840|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1	NM_198593|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1	BC021553|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1
hg19_v1_chr15_-_56388662_56388733	0.00504507	SOX2.p2	AL832584|RFX7|64864|regulatory factor X, 7
hg19_v1_chr12_-_91452130_91452130	0.00502448	SOX2.p2	NM_007035|KERA|11081|keratocan
hg19_v1_chr6_-_86351156_86351168	0.00486535	SOX2.p2	AY034481|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein	AY034482|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein	AY034483|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein	NM_001159675|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein	NM_001159676|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein
hg19_v1_chr12_+_22778085_22778210	0.00484782	SOX2.p2	BC006111|ETNK1|55500|ethanolamine kinase 1	AL137750|ETNK1|55500|ethanolamine kinase 1	AK074425|ETNK1|55500|ethanolamine kinase 1
hg19_v1_chr6_-_17987852_17987880	0.00484628	SOX2.p2	BC062673|KIF13A|63971|kinesin family member 13A	NM_001105566|KIF13A|63971|kinesin family member 13A	NM_001105567|KIF13A|63971|kinesin family member 13A	NM_001105568|KIF13A|63971|kinesin family member 13A	NM_001243423|KIF13A|63971|kinesin family member 13A	NM_022113|KIF13A|63971|kinesin family member 13A
hg19_v1_chr19_+_16178170_16178350	0.00481008	SOX2.p2	NM_001145160|TPM4|7171|tropomyosin 4	AK023385|TPM4|7171|tropomyosin 4
hg19_v1_chr7_+_116502591_116502592	0.00472186	SOX2.p2	AK314808|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg19_v1_chr1_+_203764802_203764807	0.00467258	SOX2.p2	AK296983|ZC3H11A|9877|zinc finger CCCH-type containing 11A
hg19_v1_chr20_+_34824379_34824399	0.00465758	SOX2.p2	AL117419|C20orf4|25980|chromosome 20 open reading frame 4
hg19_v1_chr11_+_13690151_13690229	0.00460467	SOX2.p2	NM_032228|FAR1|84188|fatty acyl CoA reductase 1	AY358784|FAR1|84188|fatty acyl CoA reductase 1
hg19_v1_chr22_-_37172113_37172198	0.00454478	SOX2.p2	AL022729|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)	AK307105|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)	AK307382|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)	BC000566|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)	AB209424|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)	NM_001177701|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)	NM_006860|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)
hg19_v1_chr14_-_24037266_24037278	0.00447085	SOX2.p2	AF068706|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit	NM_003917|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit
hg19_v1_chr2_-_213403280_213403351	0.00445959	SOX2.p2	BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)
hg19_v1_chr3_+_49977476_49977577	0.00438752	SOX2.p2	AK291719|RBM6|10180|RNA binding motif protein 6	NM_001167582|RBM6|10180|RNA binding motif protein 6	NM_005777|RBM6|10180|RNA binding motif protein 6	AK298108|RBM6|10180|RNA binding motif protein 6	AF069517|RBM6|10180|RNA binding motif protein 6	AL832236|RBM6|10180|RNA binding motif protein 6	BX648535|RBM6|10180|RNA binding motif protein 6
hg19_v1_chr4_+_88343702_88344056	0.00436222	SOX2.p2	NM_001248011|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	NM_024047|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK027295|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK074845|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	NM_198038|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AF265341|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AF273028|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK075408|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK308028|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	BC000542|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AY359123|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9
hg19_v1_chr13_+_113656050_113656067	0.00435795	SOX2.p2	BC011853|MCF2L|23263|MCF.2 cell line derived transforming sequence-like	BC020208|MCF2L|23263|MCF.2 cell line derived transforming sequence-like
hg19_v1_chr6_-_108279307_108279318	0.00433281	SOX2.p2	AJ011779|SEC63|11231|SEC63 homolog (S. cerevisiae)
hg19_v1_chr10_+_18549583_18549697	0.0042672	SOX2.p2	NM_000724|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AB208917|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	U95019|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit
hg19_v1_chr19_-_52490050_52490102	0.00425028	SOX2.p2	AK021864|ZNF350|59348|zinc finger protein 350	AF309561|ZNF350|59348|zinc finger protein 350	AK023467|ZNF350|59348|zinc finger protein 350	NM_021632|ZNF350|59348|zinc finger protein 350
hg19_v1_chrX_+_107683015_107683153	0.00423108	SOX2.p2	BC151846|COL4A5|1287|collagen, type IV, alpha 5	M90464|COL4A5|1287|collagen, type IV, alpha 5	NM_000495|COL4A5|1287|collagen, type IV, alpha 5	NM_033380|COL4A5|1287|collagen, type IV, alpha 5
hg19_v1_chr20_+_60878048_60878073	0.00416187	SOX2.p2	BC017245|ADRM1|11047|adhesion regulating molecule 1	BC093021|ADRM1|11047|adhesion regulating molecule 1	BC003059|ADRM1|11047|adhesion regulating molecule 1	AK297567|ADRM1|11047|adhesion regulating molecule 1	D64154|ADRM1|11047|adhesion regulating molecule 1
hg19_v1_chr6_-_88299692_88299723	0.00406379	SOX2.p2	AK023550|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	BC022341|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	BC010420|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial
hg19_v1_chr7_+_116502597_116502668	0.00402083	SOX2.p2	BC005338|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK293405|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK294409|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK315915|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK222989|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK223004|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	U03269|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	BC015963|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	BT006735|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	U03851|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg19_v1_chr13_+_98605928_98605947	0.00401774	SOX2.p2	NM_002271|IPO5|3843|importin 5	BC045640|IPO5|3843|importin 5
hg19_v1_chr6_-_47277354_47277423	0.00400302	SOX2.p2	AB209394|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg19_v1_chr5_+_121297655_121297727	0.00383034	SOX2.p2	AK058015|SRFBP1|153443|serum response factor binding protein 1	NM_152546|SRFBP1|153443|serum response factor binding protein 1	BC031222|SRFBP1|153443|serum response factor binding protein 1	AY611630|SRFBP1|153443|serum response factor binding protein 1
hg19_v1_chr17_+_29158948_29159022	0.00382059	SOX2.p2	AL832103|ATAD5|79915|ATPase family, AAA domain containing 5	BC015051|ATAD5|79915|ATPase family, AAA domain containing 5	AJ314648|ATAD5|79915|ATPase family, AAA domain containing 5	AY557611|ATAD5|79915|ATPase family, AAA domain containing 5	NM_024857|ATAD5|79915|ATPase family, AAA domain containing 5
hg19_v1_chr15_-_49338496_49338777	0.00381158	SOX2.p2	D87445|SECISBP2L|9728|SECIS binding protein 2-like	AK307480|SECISBP2L|9728|SECIS binding protein 2-like	AK308183|SECISBP2L|9728|SECIS binding protein 2-like	BC008635|SECISBP2L|9728|SECIS binding protein 2-like	BC033001|SECISBP2L|9728|SECIS binding protein 2-like	NM_001193489|SECISBP2L|9728|SECIS binding protein 2-like	NM_014701|SECISBP2L|9728|SECIS binding protein 2-like
hg19_v1_chr17_+_42148097_42148302	0.00360194	SOX2.p2	NM_138387|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	BC021574|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	BC062596|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	BC002494|G6PC3|92579|glucose 6 phosphatase, catalytic, 3
hg19_v1_chr12_+_105380073_105380107	0.00348042	SOX2.p2	NM_152318|C12orf45|121053|chromosome 12 open reading frame 45
hg19_v1_chr10_+_12110968_12111047	0.00340723	SOX2.p2	BC002477|DHTKD1|55526|dehydrogenase E1 and transketolase domain containing 1	BC007955|DHTKD1|55526|dehydrogenase E1 and transketolase domain containing 1	AK309810|DHTKD1|55526|dehydrogenase E1 and transketolase domain containing 1
hg19_v1_chr11_-_61124223_61124360	0.00339538	SOX2.p2	AK225754|CYBASC3|220002|cytochrome b, ascorbate dependent 3	AK310167|CYBASC3|220002|cytochrome b, ascorbate dependent 3	NM_001161452|CYBASC3|220002|cytochrome b, ascorbate dependent 3
hg19_v1_chr20_-_61569265_61569305	0.00332028	SOX2.p2	NM_022105|DIDO1|11083|death inducer-obliterator 1	NM_033081|DIDO1|11083|death inducer-obliterator 1	NM_080797|DIDO1|11083|death inducer-obliterator 1
hg19_v1_chr6_+_79787548_79787573	0.00327557	SOX2.p2	BC036479|PHIP|55023|pleckstrin homology domain interacting protein
hg19_v1_chr18_-_78005230_78005488	0.00323925	SOX2.p2	AB044556|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)	AB178535|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)	AB178536|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)	BC060797|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)	NM_032510|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)
hg19_v1_chr6_+_42982027_42982066	0.00317018	SOX2.p2	BC001793|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr7_-_92463211_92463230	0.00312047	SOX2.p2	BC052264|CDK6|1021|cyclin-dependent kinase 6	NM_001259|CDK6|1021|cyclin-dependent kinase 6
hg19_v1_chr5_-_34043234_34043370	0.00308526	SOX2.p2	EU399231|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	EU399232|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	BC112925|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AF329837|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	BC120990|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AF326976|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AY358388|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AK075533|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	BX640995|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AK315921|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	AK295968|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	NM_030945|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	NM_181435|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3
hg19_v1_chr12_+_9822205_9822330	0.00285345	SOX2.p2	BC063128|CLEC2D|29121|C-type lectin domain family 2, member D	NM_001197318|CLEC2D|29121|C-type lectin domain family 2, member D	NM_013269|CLEC2D|29121|C-type lectin domain family 2, member D	AK310150|CLEC2D|29121|C-type lectin domain family 2, member D	NM_001004419|CLEC2D|29121|C-type lectin domain family 2, member D	AK310554|CLEC2D|29121|C-type lectin domain family 2, member D	AK313554|CLEC2D|29121|C-type lectin domain family 2, member D	BC019883|CLEC2D|29121|C-type lectin domain family 2, member D	AF133299|CLEC2D|29121|C-type lectin domain family 2, member D	AF285087|CLEC2D|29121|C-type lectin domain family 2, member D	FN813349|CLEC2D|29121|C-type lectin domain family 2, member D	FN813350|CLEC2D|29121|C-type lectin domain family 2, member D	FN813351|CLEC2D|29121|C-type lectin domain family 2, member D	NM_001197317|CLEC2D|29121|C-type lectin domain family 2, member D	NM_001197319|CLEC2D|29121|C-type lectin domain family 2, member D
hg19_v1_chrX_+_108779009_108779020	0.00281526	SOX2.p2	AK023289|NXT2|55916|nuclear transport factor 2-like export factor 2	NM_018698|NXT2|55916|nuclear transport factor 2-like export factor 2	BC120984|NXT2|55916|nuclear transport factor 2-like export factor 2	BC120985|NXT2|55916|nuclear transport factor 2-like export factor 2
hg19_v1_chr18_-_19997773_19997877	0.00276981	SOX2.p2	HQ258502|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1	BC132871|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1	AF273058|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1	BC031065|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1	BC070128|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1	NM_172241|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1
hg19_v1_chr1_-_173793268_173793326	0.00272913	SOX2.p2	AK055606|CENPL|91687|centromere protein L	BC019022|CENPL|91687|centromere protein L	NM_001171182|CENPL|91687|centromere protein L	BC007071|CENPL|91687|centromere protein L
hg19_v1_chr1_-_1167358_1167371	0.00267551	SOX2.p2	AK223079|SDF4|51150|stromal cell derived factor 4	AK222521|SDF4|51150|stromal cell derived factor 4	AK315517|SDF4|51150|stromal cell derived factor 4	AF132749|SDF4|51150|stromal cell derived factor 4
hg19_v1_chr12_+_7080081_7080186	0.00262176	SOX2.p2	AK298745|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	U72514|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	U56427|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)
hg19_v1_chr8_+_23104153_23104332	0.00260922	SOX2.p2	AK092500|CHMP7|91782|charged multivesicular body protein 7	AL833843|CHMP7|91782|charged multivesicular body protein 7	BC019110|CHMP7|91782|charged multivesicular body protein 7	AK296592|CHMP7|91782|charged multivesicular body protein 7	BC004344|CHMP7|91782|charged multivesicular body protein 7
hg19_v1_chr4_+_78078332_78078391	0.0026074	SOX2.p2	NM_004354|CCNG2|901|cyclin G2	AK292029|CCNG2|901|cyclin G2	BC032518|CCNG2|901|cyclin G2
hg19_v1_chr19_-_2740053_2740081	0.00258677	SOX2.p2	NM_144564|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3	NM_213568|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3
hg19_v1_chr9_-_98268866_98268881	0.00254012	SOX2.p2	AB209495|PTCH1|5727|patched 1	AB233423|PTCH1|5727|patched 1	AB233424|PTCH1|5727|patched 1
hg19_v1_chr3_+_93781823_93781865	0.0025332	SOX2.p2	AF169972|NSUN3|63899|NOP2/Sun domain family, member 3	BC018432|NSUN3|63899|NOP2/Sun domain family, member 3	BC020602|NSUN3|63899|NOP2/Sun domain family, member 3	BC057238|NSUN3|63899|NOP2/Sun domain family, member 3	NM_022072|NSUN3|63899|NOP2/Sun domain family, member 3	AK026262|NSUN3|63899|NOP2/Sun domain family, member 3
hg19_v1_chr1_-_23696267_23696358	0.00253202	SOX2.p2	NM_001077195|ZNF436|80818|zinc finger protein 436
hg19_v1_chr19_-_56988698_56988769	0.00249542	SOX2.p2	AK096513|ZNF667|63934|zinc finger protein 667	AK056508|ZNF667|63934|zinc finger protein 667	CR936605|ZNF667|63934|zinc finger protein 667	BX647401|ZNF667|63934|zinc finger protein 667	NM_022103|ZNF667|63934|zinc finger protein 667
hg19_v1_chr19_-_39523132_39523334	0.00245968	SOX2.p2	BC030060|FBXO27|126433|F-box protein 27	AF436061|FBXO27|126433|F-box protein 27	BC014527|FBXO27|126433|F-box protein 27	NM_178820|FBXO27|126433|F-box protein 27
hg19_v1_chr7_+_148844685_148844833	0.0024134	SOX2.p2	AY049744|ZNF398|57541|zinc finger protein 398
hg19_v1_chr20_+_34995443_34995443	0.0023849	SOX2.p2	NM_014902|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4
hg19_v1_chr4_+_134073180_134073387	0.00224573	SOX2.p2	AK024636|PCDH10|57575|protocadherin 10	AL157470|PCDH10|57575|protocadherin 10
hg19_v1_chr11_-_85430117_85430210	0.00219369	SOX2.p2	BC068495|SYTL2|54843|synaptotagmin-like 2	AK298604|SYTL2|54843|synaptotagmin-like 2	AK074737|SYTL2|54843|synaptotagmin-like 2	NM_206929|SYTL2|54843|synaptotagmin-like 2	AK092121|SYTL2|54843|synaptotagmin-like 2
hg19_v1_chr5_-_95018659_95018713	0.00218209	SOX2.p2	AY027526|SPATA9|83890|spermatogenesis associated 9	AK292338|SPATA9|83890|spermatogenesis associated 9	AK310260|SPATA9|83890|spermatogenesis associated 9	BC047333|SPATA9|83890|spermatogenesis associated 9	AK093225|SPATA9|83890|spermatogenesis associated 9	BC032832|SPATA9|83890|spermatogenesis associated 9	NM_031952|SPATA9|83890|spermatogenesis associated 9
hg19_v1_chr11_+_118215058_118215111	0.00217647	SOX2.p2	NM_000073|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK313966|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK315895|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK310622|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	BC069685|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	X04145|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK223314|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK310578|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	BC113830|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)
hg19_v1_chr4_-_89080010_89080065	0.00217523	SOX2.p2	BC021281|ABCG2|9429|ATP-binding cassette, sub-family G (WHITE), member 2	NM_004827|ABCG2|9429|ATP-binding cassette, sub-family G (WHITE), member 2
hg19_v1_chr19_-_47164289_47164452	0.00212329	SOX2.p2	BC034052|DACT3|147906|dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)	NM_145056|DACT3|147906|dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)
hg19_v1_chr6_-_108279212_108279302	0.00195176	SOX2.p2	AF100141|SEC63|11231|SEC63 homolog (S. cerevisiae)	BC001153|SEC63|11231|SEC63 homolog (S. cerevisiae)	AK074835|SEC63|11231|SEC63 homolog (S. cerevisiae)
hg19_v1_chr12_+_133707212_133707213	0.0018616	SOX2.p2	AK314784|ZNF10|7556|zinc finger protein 10	BC024182|ZNF10|7556|zinc finger protein 10	NM_015394|ZNF10|7556|zinc finger protein 10
hg19_v1_chr17_+_7311501_7311501	0.00183493	SOX2.p2	AF376802|NLGN2|57555|neuroligin 2	NM_020795|NLGN2|57555|neuroligin 2
hg19_v1_chr17_-_10325266_10325266	0.00179812	SOX2.p2	AK303395|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal	NM_002472|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal
hg19_v1_chr1_-_200377262_200377276	0.00178836	SOX2.p2	AK021707|ZNF281|23528|zinc finger protein 281
hg19_v1_chr7_+_139025104_139025240	0.00168466	SOX2.p2	AK298166|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)	NM_001244585|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)
hg19_v1_chr4_+_40198526_40198757	0.00165329	SOX2.p2	NM_004310|RHOH|399|ras homolog gene family, member H	Z35227|RHOH|399|ras homolog gene family, member H	BC014261|RHOH|399|ras homolog gene family, member H	AK313744|RHOH|399|ras homolog gene family, member H
hg19_v1_chr3_+_52828783_52828815	0.00163771	SOX2.p2	NM_002217|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3	X67055|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3	AK222757|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3	AK298450|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3	BC107604|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3	BC107605|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3	BC107814|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3
hg19_v1_chr6_+_43149925_43149950	0.00162241	SOX2.p2	BC028159|CUL9|23113|cullin 9
hg19_v1_chr2_+_86947429_86947542	0.0015541	SOX2.p2	AK022815|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)	BC047668|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
hg19_v1_chr3_+_73045939_73045975	0.00151168	SOX2.p2	AK289901|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	BC100281|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2
hg19_v1_chr2_+_96068423_96068535	0.00149646	SOX2.p2	AF151863|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A	NM_016044|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A	BC009403|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A	BC110911|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A
hg19_v1_chr1_-_84464728_84464865	0.00148279	SOX2.p2	AK126792|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC048970|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC032829|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC060878|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC028350|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	NM_024686|TTLL7|79739|tubulin tyrosine ligase-like family, member 7
hg19_v1_chr2_+_219081864_219081874	0.00141595	SOX2.p2	NM_152862|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa
hg19_v1_chr11_-_62689011_62689135	0.00139431	SOX2.p2	BC022984|CHRM1|1128|cholinergic receptor, muscarinic 1	NM_000738|CHRM1|1128|cholinergic receptor, muscarinic 1	AJ006520|CHRM1|1128|cholinergic receptor, muscarinic 1
hg19_v1_chr11_-_61129273_61129324	0.00137451	SOX2.p2	BC047710|CYBASC3|220002|cytochrome b, ascorbate dependent 3	AK297063|CYBASC3|220002|cytochrome b, ascorbate dependent 3	AK310976|CYBASC3|220002|cytochrome b, ascorbate dependent 3
hg19_v1_chr6_+_31707724_31707866	0.0013568	SOX2.p2	NM_002441|MSH5|4439|mutS homolog 5 (E. coli)	NM_025259|MSH5|4439|mutS homolog 5 (E. coli)	NM_172165|MSH5|4439|mutS homolog 5 (E. coli)	NM_172166|MSH5|4439|mutS homolog 5 (E. coli)	AF070071|MSH5|4439|mutS homolog 5 (E. coli)	AK304221|MSH5|4439|mutS homolog 5 (E. coli)	AF034759|MSH5|4439|mutS homolog 5 (E. coli)	AJ245661|MSH5-C6orf26|100532732|MSH5-C6orf26 readthrough (non-protein coding)	BC001358|MSH5|4439|mutS homolog 5 (E. coli)	BC002498|MSH5|4439|mutS homolog 5 (E. coli)	BC041031|MSH5|4439|mutS homolog 5 (E. coli)	AF048986|MSH5|4439|mutS homolog 5 (E. coli)
hg19_v1_chr3_-_112359547_112359558	0.00131104	SOX2.p2	BC086876|CCDC80|151887|coiled-coil domain containing 80
hg19_v1_chr12_-_75603214_75603243	0.00121522	SOX2.p2	AK309245|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2	AB209994|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2	AK294269|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2
hg19_v1_chr13_-_26795821_26795893	0.00121233	SOX2.p2	AY009109|RNF6|6049|ring finger protein (C3H2C3 type) 6	NM_183044|RNF6|6049|ring finger protein (C3H2C3 type) 6
hg19_v1_chr16_+_28943259_28943345	0.0011856	SOX2.p2	NM_001178098|CD19|930|CD19 molecule	NM_001770|CD19|930|CD19 molecule	BC006338|CD19|930|CD19 molecule	AK301363|CD19|930|CD19 molecule	AK313577|CD19|930|CD19 molecule	BC052294|CD19|930|CD19 molecule	M21097|CD19|930|CD19 molecule	X13312|CD19|930|CD19 molecule	AK307295|CD19|930|CD19 molecule	DQ893016|CD19|930|CD19 molecule	DQ896261|CD19|930|CD19 molecule	AK130657|CD19|930|CD19 molecule	AK301167|CD19|930|CD19 molecule	AK304456|CD19|930|CD19 molecule
hg19_v1_chrX_+_108780058_108780109	0.00106816	SOX2.p2	NM_001242617|NXT2|55916|nuclear transport factor 2-like export factor 2	AF201942|NXT2|55916|nuclear transport factor 2-like export factor 2	BC014888|NXT2|55916|nuclear transport factor 2-like export factor 2	AF212223|NXT2|55916|nuclear transport factor 2-like export factor 2
hg19_v1_chr13_+_22245083_22245214	0.00106524	SOX2.p2	AK290792|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)	NM_002010|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)
hg19_v1_chr4_-_71705188_71705219	0.00104679	SOX2.p2	AK094806|GRSF1|2926|G-rich RNA sequence binding factor 1	NM_001098477|GRSF1|2926|G-rich RNA sequence binding factor 1
hg19_v1_chr2_-_74007101_74007285	0.000988458	SOX2.p2	DQ891356|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	DQ894537|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	BC000346|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	AF023917|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	AK315271|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	CR627368|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	NM_003584|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)
hg19_v1_chr2_+_216986817_216986917	0.000982908	SOX2.p2	AK026166|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)
hg19_v1_chr16_-_30103204_30103290	0.000883573	SOX2.p2	BC026031|TBX6|6911|T-box 6	NM_004608|TBX6|6911|T-box 6	AK022330|TBX6|6911|T-box 6
hg19_v1_chr15_+_80696569_80696899	0.000879981	SOX2.p2	BC051335|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	NM_014862|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	BC036099|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	BX647212|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	BX538026|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	AM392973|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	DQ890610|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	DQ894176|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2
hg19_v1_chr12_+_66583004_66583016	0.000863395	SOX2.p2	AF113136|IRAK3|11213|interleukin-1 receptor-associated kinase 3
hg19_v1_chr7_-_156803224_156803366	0.000861649	SOX2.p2	AF107457|MNX1|3110|motor neuron and pancreas homeobox 1	NM_005515|MNX1|3110|motor neuron and pancreas homeobox 1
hg19_v1_chr10_+_89117424_89117476	0.000816941	SOX2.p2	BC092519|FAM22A|728118|family with sequence similarity 22, member A	NM_001009610|FAM22D|728130|family with sequence similarity 22, member D
hg19_v1_chr3_-_49893885_49894006	0.000750897	SOX2.p2	AB451320|TRAIP|10293|TRAF interacting protein	AB451449|TRAIP|10293|TRAF interacting protein	EF036504|TRAIP|10293|TRAF interacting protein	AK225873|TRAIP|10293|TRAF interacting protein	BC000310|TRAIP|10293|TRAF interacting protein	BC019283|TRAIP|10293|TRAF interacting protein	AK292172|TRAIP|10293|TRAF interacting protein	NM_005879|TRAIP|10293|TRAF interacting protein	U77845|TRAIP|10293|TRAF interacting protein	AK295780|TRAIP|10293|TRAF interacting protein
hg19_v1_chr20_-_34195409_34195436	0.000704284	SOX2.p2	BC029951|FER1L4|80307|fer-1-like 4 (C. elegans) pseudogene	AY461812|FER1L4|80307|fer-1-like 4 (C. elegans) pseudogene
hg19_v1_chr12_-_48152860_48152888	0.000610518	SOX2.p2	AK092448|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3	NM_001098531|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3
hg19_v1_chr1_+_165797060_165797112	0.000601908	SOX2.p2	AF236637|UCK2|7371|uridine-cytidine kinase 2	AK294537|UCK2|7371|uridine-cytidine kinase 2	AB062451|UCK2|7371|uridine-cytidine kinase 2
hg19_v1_chr2_+_48757063_48757180	0.000590117	SOX2.p2	AK309740|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough	NM_001198593|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough
hg19_v1_chr16_-_3068161_3068187	0.000525503	SOX2.p2	BC008934|CLDN6|9074|claudin 6	AK075329|CLDN6|9074|claudin 6	NM_021195|CLDN6|9074|claudin 6
hg19_v1_chr7_-_33080517_33080521	0.00041874	SOX2.p2	BC015856|NT5C3|51251|5'-nucleotidase, cytosolic III	NM_001166118|NT5C3|51251|5'-nucleotidase, cytosolic III	NM_016489|NT5C3|51251|5'-nucleotidase, cytosolic III
hg19_v1_chr18_-_54305657_54305837	0.000417791	SOX2.p2	AB209263|TXNL1|9352|thioredoxin-like 1	DQ891846|TXNL1|9352|thioredoxin-like 1	DQ895034|TXNL1|9352|thioredoxin-like 1	EU176640|TXNL1|9352|thioredoxin-like 1	AF051896|TXNL1|9352|thioredoxin-like 1	AF052659|TXNL1|9352|thioredoxin-like 1	AK313653|TXNL1|9352|thioredoxin-like 1
hg19_v1_chr17_-_20946088_20946457	0.000328039	SOX2.p2	AB028986|USP22|23326|ubiquitin specific peptidase 22	NM_015276|USP22|23326|ubiquitin specific peptidase 22
hg19_v1_chr3_+_52719935_52720108	0.00030923	SOX2.p2	AF191018|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	NM_014366|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	NM_206825|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	NM_206826|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	AK315484|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	AK027514|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	AK027516|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	BC001024|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	EU831969|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	EU832062|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)
hg19_v1_chr11_-_62369097_62369177	0.000267571	SOX2.p2	BC023656|MTA2|9219|metastasis associated 1 family, member 2	BC053650|MTA2|9219|metastasis associated 1 family, member 2
hg19_v1_chr14_-_105444693_105444723	0.000257356	SOX2.p2	NM_138420|AHNAK2|113146|AHNAK nucleoprotein 2
hg19_v1_chr12_+_6898605_6898642	0.000249299	SOX2.p2	NM_000616|CD4|920|CD4 molecule	NM_001195014|CD4|920|CD4 molecule	NM_001195015|CD4|920|CD4 molecule	NM_001195016|CD4|920|CD4 molecule	NM_001195017|CD4|920|CD4 molecule
hg19_v1_chr22_+_43808011_43808023	0.000206585	SOX2.p2	AK290541|MPPED1|758|metallophosphoesterase domain containing 1	AK297276|MPPED1|758|metallophosphoesterase domain containing 1	AK299516|MPPED1|758|metallophosphoesterase domain containing 1	AK299531|MPPED1|758|metallophosphoesterase domain containing 1	NM_001044370|MPPED1|758|metallophosphoesterase domain containing 1
hg19_v1_chr15_+_64388082_64388198	0.000178482	SOX2.p2	NM_001242933|SNX1|6642|sorting nexin 1	NM_003099|SNX1|6642|sorting nexin 1	NM_148955|SNX1|6642|sorting nexin 1	AB209013|SNX1|6642|sorting nexin 1	AK128179|SNX1|6642|sorting nexin 1	AK222561|SNX1|6642|sorting nexin 1	AK291752|SNX1|6642|sorting nexin 1
hg19_v1_chr10_+_104613966_104614036	0.000173843	SOX2.p2	NM_001136200|C10orf32|119032|chromosome 10 open reading frame 32	NM_144591|C10orf32|119032|chromosome 10 open reading frame 32	AL832477|C10orf32|119032|chromosome 10 open reading frame 32	AK098071|C10orf32|119032|chromosome 10 open reading frame 32	BC015994|C10orf32|119032|chromosome 10 open reading frame 32	BC040069|C10orf32-AS3MT|100528007|C10orf32-AS3MT readthrough	AK311742|C10orf32|119032|chromosome 10 open reading frame 32
hg19_v1_chr2_-_178128527_178128616	1.72903e-05	SOX2.p2	AK311688|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2	NM_001145412|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2	NM_001145413|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2
