Motif ID: LHX3,4.p2

Z-value: 0.624


Transcription factors associated with LHX3,4.p2:

Gene SymbolEntrez IDGene Name
LHX3 8022 LIM homeobox 3
LHX4 89884 LIM homeobox 4

Activity-expression correlation:

Gene SymbolPromoterPearson corr. coef.P-valuePlot
LHX4hg19_v1_chr1_+_180199432_180199441-0.019.9e-01Click!


Activity profile for motif LHX3,4.p2.

activity profile for motif LHX3,4.p2


Sorted Z-values histogram for motif LHX3,4.p2

Sorted Z-values for motif LHX3,4.p2



Network of associatons between targets according to the STRING database.



First level regulatory network of LHX3,4.p2

PNG image of the network

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Top targets:


Promoter Score Refseq Gene Symbol Gene Name
chr12_+_109551041 0.395


chr3_-_57234279 0.379 NM_003865
HESX1
HESX homeobox 1
chr1_+_43253660 0.376 NM_001242750
LOC100129924
uncharacterized LOC100129924
chr9_+_12693385 0.372 NM_000550
TYRP1
tyrosinase-related protein 1
chr3_+_151591428 0.351 NM_033050
SUCNR1
succinate receptor 1
chr5_+_147691988 0.318 NM_032566
SPINK7
serine peptidase inhibitor, Kazal type 7 (putative)
chr8_+_32785485 0.301


chr1_+_168250277 0.301 NM_005149
TBX19
T-box 19
chr12_-_10021932 0.282 CLEC2B
C-type lectin domain family 2, member B
chr12_-_10282680 0.281 NM_022570
NM_197947
NM_197948
NM_197949
NM_197950
NM_197954
CLEC7A





C-type lectin domain family 7, member A





chr10_+_5238756 0.238 NM_001818
AKR1C4
aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)
chrM_+_10123 0.232


chr6_-_87804773 0.224 NM_000735
NM_001252383
CGA

glycoprotein hormones, alpha polypeptide

chr2_-_99871569 0.209 NM_175735
LYG2
lysozyme G-like 2
chr10_+_695887 0.206 C10orf108
chromosome 10 open reading frame 108
chr2_+_27719702 0.200 NM_001486
GCKR
glucokinase (hexokinase 4) regulator
chr6_+_31496738 0.198 NM_001011700
MCCD1
mitochondrial coiled-coil domain 1
chr17_+_74463629 0.196 NM_001088
AANAT
aralkylamine N-acetyltransferase
chr5_-_137475076 0.194 NM_003551
NME5
non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)
chr13_+_24463006 0.191 NM_001014442
C1QTNF9B-AS1
C1QTNF9B antisense RNA 1 (non-protein coding)
chr4_+_88896838 0.190 SPP1
secreted phosphoprotein 1
chr4_+_88896868 0.188 SPP1
secreted phosphoprotein 1
chr12_-_26277807 0.187 NM_030762
BHLHE41
basic helix-loop-helix family, member e41
chr16_-_67517715 0.186 NM_001138
AGRP
agouti related protein homolog (mouse)
chr6_-_167797917 0.178 NM_004610
TCP10
t-complex 10 homolog (mouse)
chr20_-_34117447 0.166 NM_001145350
C20orf173
chromosome 20 open reading frame 173
chr7_-_107880492 0.165 NM_001037132
NRCAM
neuronal cell adhesion molecule
chr14_-_71001731 0.162 NM_003814
ADAM20
ADAM metallopeptidase domain 20
chr5_+_59784004 0.162 PART1
prostate androgen-regulated transcript 1 (non-protein coding)
chrX_-_102531673 0.157 NM_001012979
TCEAL5
transcription elongation factor A (SII)-like 5
chr4_+_88896899 0.155 SPP1
secreted phosphoprotein 1
chr6_+_26104103 0.149 NM_003542
HIST2H4B
HIST1H4C
histone cluster 2, H4b
histone cluster 1, H4c
chr2_+_210444364 0.142 NM_002374
NM_031845
NM_031847
MAP2


microtubule-associated protein 2


chr9_-_95166827 0.140 NM_014057
NM_033014
OGN

osteoglycin

chr19_-_36304200 0.138 NM_021232
PRODH2
proline dehydrogenase (oxidase) 2
chr11_-_71524890 0.124 LOC285407
asparagine-linked glycosylation 1 homolog pseudogene
chr3_+_82035288 0.123


chr6_-_53013581 0.123 NM_003643
GCM1
glial cells missing homolog 1 (Drosophila)
chr8_+_22210311 0.115 PIWIL2
piwi-like 2 (Drosophila)
chr9_+_75766777 0.112 NM_000700
ANXA1
annexin A1
chr4_+_88896801 0.111 NM_000582
NM_001040058
NM_001040060
NM_001251829
NM_001251830
SPP1




secreted phosphoprotein 1




chr12_-_53600999 0.111 NM_000889
ITGB7
integrin, beta 7
chr7_+_28452143 0.110 NM_182898
CREB5
cAMP responsive element binding protein 5
chr3_+_46411632 0.106 NM_000579
NM_001100168
CCR5

chemokine (C-C motif) receptor 5

chr14_-_61115906 0.106 NM_005982
SIX1
SIX homeobox 1
chr6_-_133035180 0.103 NM_004666
VNN1
vanin 1
chr3_+_73110809 0.103 NM_018029
EBLN2
endogenous Bornavirus-like nucleoprotein 2
chr19_-_36303724 0.102 PRODH2
proline dehydrogenase (oxidase) 2
chr13_-_99910548 0.100 NM_001098200
NM_005292
GPR18

G protein-coupled receptor 18

chr12_+_54410893 0.099 HOXC5
HOXC6
homeobox C5
homeobox C6
chr4_+_186990308 0.098 NM_003265
TLR3
toll-like receptor 3
chr1_+_117544371 0.098 NM_004258
CD101
CD101 molecule
chr7_-_14025826 0.096 NM_001163150
NM_001163151
NM_001163152
ETV1


ets variant 1


chr2_+_177016112 0.096 NM_014621
HOXD4
homeobox D4
chr1_+_192127591 0.093 NM_130782
RGS18
regulator of G-protein signaling 18
chrX_+_70765479 0.093 OGT
O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
chrX_-_13835187 0.092 GPM6B
glycoprotein M6B
chr2_-_175462428 0.092 WIPF1
WAS/WASL interacting protein family, member 1
chr4_+_166131170 0.092 NM_001161521
NM_001161522
KLHL2

kelch-like 2, Mayven (Drosophila)

chr1_+_97260515 0.091


chr7_-_87342569 0.090 NM_000927
ABCB1
ATP-binding cassette, sub-family B (MDR/TAP), member 1
chr1_+_198608216 0.087 PTPRC
protein tyrosine phosphatase, receptor type, C
chr6_-_24583454 0.086 NM_001252328
KIAA0319
KIAA0319
chr10_+_102222797 0.078 NM_003393
WNT8B
wingless-type MMTV integration site family, member 8B
chr3_+_113616317 0.077 NM_001172105
GRAMD1C
GRAM domain containing 1C
chr19_+_15838833 0.077 NM_013939
OR10H2
olfactory receptor, family 10, subfamily H, member 2
chr4_+_169418167 0.076 NM_001166108
NM_016081
PALLD

palladin, cytoskeletal associated protein

chr17_-_39092714 0.076 KRT23
keratin 23 (histone deacetylase inducible)
chr11_+_99426872 0.075 NM_175566
CNTN5
contactin 5
chr21_-_27372461 0.075 APP
amyloid beta (A4) precursor protein
chr3_-_64211111 0.073 NM_198859
PRICKLE2
prickle homolog 2 (Drosophila)
chr2_+_177016337 0.072


chr3_+_156544075 0.072 NM_001004316
NM_001193283
LEKR1

leucine, glutamate and lysine rich 1

chr9_+_118916069 0.071 NM_002581
PAPPA
pregnancy-associated plasma protein A, pappalysin 1
chr5_+_71502700 0.071 MAP1B
microtubule-associated protein 1B
chr7_+_77469446 0.070 NM_001127357
NM_001127359
NM_020432
PHTF2


putative homeodomain transcription factor 2


chr6_+_31583766 0.069 NM_032955
AIF1
allograft inflammatory factor 1
chr6_+_136172802 0.068 NM_018945
PDE7B
phosphodiesterase 7B
chr1_-_232651227 0.067 NM_020808
SIPA1L2
signal-induced proliferation-associated 1 like 2
chr21_-_43771069 0.066 NM_005423
TFF2
trefoil factor 2
chr15_+_93443559 0.066 CHD2
chromodomain helicase DNA binding protein 2
chrX_-_13835012 0.066 GPM6B
glycoprotein M6B
chr12_+_28410132 0.066 NM_018318
CCDC91
coiled-coil domain containing 91
chr10_+_17270257 0.065 NM_003380
VIM
vimentin
chr9_+_130026755 0.063 NM_032293
GARNL3
GTPase activating Rap/RanGAP domain-like 3
chr22_+_23487512 0.062 NM_004914
RAB36
RAB36, member RAS oncogene family
chr8_+_9953061 0.062 NM_001135671
NM_001199729
MSRA

methionine sulfoxide reductase A

chr21_-_36231794 0.062 RUNX1
runt-related transcription factor 1
chr12_-_56756526 0.062 NM_001638
APOF
apolipoprotein F
chr10_+_91152321 0.061 NM_001548
IFIT1
interferon-induced protein with tetratricopeptide repeats 1
chr10_+_123748688 0.061 NM_206861
NM_206862
TACC2

transforming, acidic coiled-coil containing protein 2

chrX_+_36065052 0.061 NM_173695
CXorf59
chromosome X open reading frame 59
chr2_+_207406815 0.059 ADAM23
ADAM metallopeptidase domain 23
chr3_+_136649316 0.058 NM_001190796
NCK1
NCK adaptor protein 1
chr9_+_75766794 0.058 ANXA1
annexin A1
chr6_-_26108320 0.058 NM_005323
HIST1H1T
histone cluster 1, H1t
chr18_+_66465316 0.057 NM_024781
CCDC102B
coiled-coil domain containing 102B
chr1_-_53608120 0.057 NM_006671
SLC1A7
solute carrier family 1 (glutamate transporter), member 7
chr9_+_12774988 0.056 NM_203403
C9orf150
chromosome 9 open reading frame 150
chr1_-_93342706 0.056 NM_001252271
FAM69A
family with sequence similarity 69, member A
chr5_+_140247767 0.056 NM_018902
NM_031861
PCDHA11

protocadherin alpha 11

chr3_-_195310985 0.056 NM_001647
APOD
apolipoprotein D
chr4_+_88754120 0.056 NM_001184695
NM_001184696
NM_001184697
NM_020203
MEPE



matrix extracellular phosphoglycoprotein



chr7_+_102553343 0.056 NM_001031692
NM_005824
LRRC17

leucine rich repeat containing 17

chr11_-_31014232 0.055 NM_020869
DCDC5
doublecortin domain containing 5
chr5_+_96212167 0.054 ERAP2
endoplasmic reticulum aminopeptidase 2
chr4_+_41614911 0.054 NM_001112719
NM_001112720
LIMCH1

LIM and calponin homology domains 1

chr6_-_64029847 0.054 NM_001143940
NM_016571
LGSN

lengsin, lens protein with glutamine synthetase domain

chr11_+_22689653 0.053 NM_177553
GAS2
growth arrest-specific 2
chr11_+_59856136 0.053 NM_000139
MS4A2
membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)
chr1_-_150738255 0.052 CTSS
cathepsin S
chr12_+_58003962 0.052 NM_001111270
ARHGEF25
Rho guanine nucleotide exchange factor (GEF) 25
chr18_+_28956739 0.052 NM_001134453
NM_177986
DSG4

desmoglein 4

chr14_-_57960432 0.052 NM_018168
C14orf105
chromosome 14 open reading frame 105
chr14_+_39583426 0.052 NM_001009182
NM_001009183
NM_003616
GEMIN2


gem (nuclear organelle) associated protein 2


chr16_+_2809933 0.052


chr3_+_194207685 0.051 FLJ34208
uncharacterized LOC401106
chr22_+_44395090 0.051 NM_001003828
PARVB
parvin, beta
chr21_-_36252872 0.051 RUNX1
runt-related transcription factor 1
chr1_+_171217632 0.051 NM_002021
FMO1
flavin containing monooxygenase 1
chr4_+_74606222 0.051 NM_000584
IL8
interleukin 8
chr7_+_18548899 0.050 NM_001204147
NM_001204148
HDAC9

histone deacetylase 9

chr2_-_134326030 0.050 NM_207363
NM_207481
NCKAP5

NCK-associated protein 5

chr3_+_149192367 0.050 NM_004617
TM4SF4
transmembrane 4 L six family member 4
chr5_-_95158365 0.050 GLRX
glutaredoxin (thioltransferase)
chr8_+_98703361 0.049 MTDH
metadherin
chr6_+_139349818 0.049 NM_021243
C6orf115
chromosome 6 open reading frame 115
chr5_+_36608430 0.049 NM_001166695
SLC1A3
solute carrier family 1 (glial high affinity glutamate transporter), member 3
chr1_-_155774769 0.049 GON4L
gon-4-like (C. elegans)
chr1_-_150738232 0.049 CTSS
cathepsin S
chr17_-_39093671 0.049 NM_015515
KRT23
keratin 23 (histone deacetylase inducible)
chrX_+_41548225 0.048 NM_001097579
NM_005300
GPR34

G protein-coupled receptor 34

chr13_-_34250899 0.048 NM_001243476
STARD13
StAR-related lipid transfer (START) domain containing 13
chr8_-_110661007 0.048 NM_001099747
NM_001099748
NM_001099749
NM_001099750
NM_017786
SYBU




syntabulin (syntaxin-interacting)




chr6_-_32908583 0.048 NM_002118
HLA-DMB
major histocompatibility complex, class II, DM beta
chr4_-_23891608 0.047 NM_013261
PPARGC1A
peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
chr3_-_157213138 0.047 NM_001167917
VEPH1
ventricular zone expressed PH domain homolog 1 (zebrafish)
chr7_+_28338939 0.047 NM_182899
CREB5
cAMP responsive element binding protein 5
chr6_+_155538096 0.046 NM_001010927
TIAM2
T-cell lymphoma invasion and metastasis 2
chr16_-_71610948 0.046 NM_000353
TAT
tyrosine aminotransferase
chr4_+_71587674 0.045 NM_001037442
NM_014961
RUFY3

RUN and FYVE domain containing 3

chr1_-_94147201 0.045 NM_003567
BCAR3
breast cancer anti-estrogen resistance 3
chr7_+_129015483 0.045 NM_001130722
AHCYL2
adenosylhomocysteinase-like 2
chr5_+_140792507 0.045 NM_018913
NM_032090
PCDHGA10

protocadherin gamma subfamily A, 10

chr10_+_17270469 0.045 VIM
vimentin
chr6_-_47253962 0.044 TNFRSF21
tumor necrosis factor receptor superfamily, member 21
chr13_+_50760015 0.044


chr21_-_43346780 0.044 NM_199050
C2CD2
C2 calcium-dependent domain containing 2
chr5_+_36606667 0.043 SLC1A3
solute carrier family 1 (glial high affinity glutamate transporter), member 3
chr10_-_52008312 0.043 NM_001143974
NM_019893
ASAH2

N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2

chr10_-_29923900 0.043 NM_021738
SVIL
supervillin
chr2_+_132480063 0.042 NM_013310
C2orf27A
chromosome 2 open reading frame 27A
chr8_-_122653493 0.042 NM_005328
HAS2
hyaluronan synthase 2
chr11_-_124973204 0.042 NM_001080546
TMEM218
transmembrane protein 218
chr6_+_49518112 0.042 NM_001145652
C6orf141
chromosome 6 open reading frame 141
chr2_-_158300517 0.042 NM_004288
CYTIP
cytohesin 1 interacting protein
chrX_+_100354797 0.042 NM_006733
CENPI
centromere protein I
chrX_+_36254050 0.041 NM_001098843
CXorf30
chromosome X open reading frame 30
chr7_+_107110501 0.041 NM_005295
GPR22
G protein-coupled receptor 22
chrX_-_21776158 0.040 NM_014332
SMPX
small muscle protein, X-linked
chr6_+_25754926 0.040 NM_005495
SLC17A4
solute carrier family 17 (sodium phosphate), member 4
chr8_-_29207795 0.040 NM_001394
DUSP4
dual specificity phosphatase 4
chr5_+_166711842 0.040 NM_001122679
ODZ2
odz, odd Oz/ten-m homolog 2 (Drosophila)
chrX_-_13835313 0.039 NM_001001995
NM_001001996
NM_005278
GPM6B


glycoprotein M6B


chr1_+_44457424 0.039 CCDC24
coiled-coil domain containing 24
chr9_-_215892 0.038 NM_152569
C9orf66
chromosome 9 open reading frame 66
chr6_+_12717036 0.038 NM_001242648
NM_030948
PHACTR1

phosphatase and actin regulator 1

chr21_-_35899046 0.037 NM_203418
RCAN1
regulator of calcineurin 1
chr4_+_169552752 0.037 NM_001166109
PALLD
palladin, cytoskeletal associated protein
chr1_+_177140062 0.037 FAM5B
family with sequence similarity 5, member B
chr8_+_92114846 0.036 NM_001129890
LRRC69
leucine rich repeat containing 69
chr5_+_150399980 0.036 NM_002084
GPX3
glutathione peroxidase 3 (plasma)
chr3_-_15563160 0.036 NM_005677
NM_080539
COLQ

collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase

chr3_-_141747434 0.036 NM_001178141
NM_001178142
NM_006286
TFDP2


transcription factor Dp-2 (E2F dimerization partner 2)


chr8_-_102803196 0.035 NCALD
neurocalcin delta
chr8_-_124749573 0.035 NM_001003954
NM_004306
ANXA13

annexin A13

chr4_+_113218498 0.035 NM_001102406
NM_025144
ALPK1

alpha-kinase 1

chr1_+_244214576 0.034 ZNF238
zinc finger protein 238
chr10_+_35426709 0.034 NM_183011
NM_183012
CREM

cAMP responsive element modulator

chr8_-_62602285 0.034 NM_001164750
NM_001164751
NM_001164752
NM_001164753
NM_020164
NM_032467
NM_032468
ASPH






aspartate beta-hydroxylase






chr7_+_112120907 0.034 NM_001134468
NM_182597
C7orf53

chromosome 7 open reading frame 53

chr1_-_35450928 0.034 NM_001195156
ZMYM6NB
ZMYM6 neighbor
chr12_+_18414473 0.033 NM_004570
PIK3C2G
phosphoinositide-3-kinase, class 2, gamma polypeptide
chr9_-_112191105 0.033 NM_001145371
NM_001145372
PTPN3

protein tyrosine phosphatase, non-receptor type 3

chr17_+_28268622 0.033 NM_198529
EFCAB5
EF-hand calcium binding domain 5
chr12_+_75784849 0.033 GLIPR1L2
GLI pathogenesis-related 1 like 2
chr12_-_16757944 0.033 LMO3
LIM domain only 3 (rhombotin-like 2)
chr9_+_130860816 0.032 NM_052901
NM_001006643
SLC25A25

solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25

chr19_+_7504573 0.032 NM_001130955
ARHGEF18
Rho/Rac guanine nucleotide exchange factor (GEF) 18
chr12_+_75784878 0.032 NM_152436
GLIPR1L2
GLI pathogenesis-related 1 like 2
chrX_+_100224696 0.032 NM_001012990
NM_001162490
NM_001162491
ARL13A


ADP-ribosylation factor-like 13A


chr3_-_55514933 0.031 WNT5A
wingless-type MMTV integration site family, member 5A
chr9_-_75567915 0.031 ALDH1A1
aldehyde dehydrogenase 1 family, member A1
chr4_-_10041833 0.031 NM_001001290
SLC2A9
solute carrier family 2 (facilitated glucose transporter), member 9
chr2_+_68961912 0.031 NM_001007231
NM_001166277
ARHGAP25

Rho GTPase activating protein 25

chr22_-_26961333 0.031 NM_001008566
TPST2
tyrosylprotein sulfotransferase 2
chr2_+_103378489 0.031 NM_144632
TMEM182
transmembrane protein 182
chr9_+_130860769 0.031 SLC25A25
solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25
chr1_+_207262583 0.030 NM_000716
NM_001017364
NM_001017367
C4BPB


complement component 4 binding protein, beta


chr12_+_12223872 0.030 NM_138723
BCL2L14
BCL2-like 14 (apoptosis facilitator)

Gene Ontology Analysis

Nothing significant found in process category.

Nothing significant found in compartment category.

Nothing significant found in function category.