Processor time taken: 428 seconds.
| BPs | c-AIC | Δ c-AIC | Segments | |||
|---|---|---|---|---|---|---|
| 0 | 19996.79256709643 |
| ||||
| 1 | 19908.39547163544 | 88.39709546099039 |
| |||
| 2 | 19821.83383007637 | 86.56164155907027 |
| |||
| 3 | 19821.83383007637 | 0 |
|
Nucleotide Model (010010) Fit Results
Log likelihood : -9966.878267882417
c-AIC : 19996.79256709643
Using general discrete distribution of rates across sites
Rate : 0.115Weight : 0.568
Rate : 1.957Weight : 0.414
Rate : 6.857Weight : 0.018
Nucleotide substitution rate matrix
| A | C | G | T | |
|---|---|---|---|---|
| A | * | 0.3223418444454191 | 1 | 0.3223418444454191 |
| C | - | * | 0.3223418444454191 | 1 |
| G | - | - | * | 0.3223418444454191 |
| T | - | - | - | * |
KH-test
| Breakpoint | LHS Raw p | LHS adjusted p | RHS Raw p | RHS adjusted p |
|---|---|---|---|---|
| 270 | 0.04580 | 0.18320 | 0.00870 | 0.03480 |
| 549 | 0.00010 | 0.00040 | 0.04720 | 0.18880 |
At p = 0.01 there are 0 significant breakpoints
At p = 0.05 there are 0 significant breakpoints
At p = 0.1 there are 0 significant breakpoints
Mean splits identify: 0.2962962962962963
Final breakpoints
(regardless of the KH-test (user defined) and adjusted to keep in-frame alignment, if necessary)
ATTENTION: as defined by the user break points are also used for further calculations even if the KH test showed no significant topological incongruence!