KLF4

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
KLF4	EZF, GKLF	Kruppel-like factor 4 (gut)	NM_004235	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Homo sapiens Kruppel-like factor 4 (gut) (KLF4), mRNA.

Upregulation at 23 h after Ebola virus infection in human cells and no expression within the bat cells.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	8	2	2	2	2	50	3	3	4
Read_Max		R. aegyptiacus	Transcriptome	18	14	16	10	19	55	9	11	20
Read_Max		R. aegyptiacus	Genome	21	16	13	10	11	35	6	18	25
DESeq		H. sapiens	Genome	26.37	6.1	2.99	11.27	8.32	322.09	16.79	13.79	20.57
DESeq		R. aegyptiacus	Transcriptome	68.21	52.74	99.94	66.01	91.89	346.18	47.72	54.7	102.47
DESeq		R. aegyptiacus	Genome	90.24	115.0	139.47	91.84	131.7	569.16	77.59	94.36	182.37

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	26.37	11.27	16.79	-1.23	-0.65	0.58
7h	6.1	8.32	13.79	0.45	1.18	0.73
23h	2.99	322.09	20.57	6.75	2.78	-3.97

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	26.37	6.1	2.99	-2.11	-3.14	-1.03
Ebov	11.27	8.32	322.09	-0.44	4.84	5.27
Marv	16.79	13.79	20.57	-0.28	0.29	0.58

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	68.21	66.01	47.72	-0.05	-0.52	-0.47
7h	52.74	91.89	54.7	0.8	0.05	-0.75
23h	99.94	346.18	102.47	1.79	0.04	-1.76

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	68.21	52.74	99.94	-0.37	0.55	0.92
Ebov	66.01	91.89	346.18	0.48	2.39	1.91
Marv	47.72	54.7	102.47	0.2	1.1	0.91