KLF4

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
KLF4 EZF, GKLF Kruppel-like factor 4 (gut) NM_004235 pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Homo sapiens Kruppel-like factor 4 (gut) (KLF4), mRNA.

Upregulation at 23 h after Ebola virus infection in human cells and no expression within the bat cells.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome8 2 2 2 2 50 3 3 4
Read_Max
batR. aegyptiacusTranscriptome 18 14 16 10 19 55 9 11 20
Read_Max
bat_genomeR. aegyptiacusGenome 21 16 13 10 11 35 6 18 25
DESeq
humanH. sapiensGenome 26.37 6.1 2.99 11.27 8.32 322.09 16.79 13.79 20.57
DESeq
batR. aegyptiacusTranscriptome 68.21 52.74 99.94 66.01 91.89 346.18 47.72 54.7 102.47
DESeq
bat_genomeR. aegyptiacusGenome 90.24 115.0 139.47 91.84 131.7 569.16 77.59 94.36 182.37

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 26.37 11.27 16.79 -1.23 -0.65 0.58
7h 6.1 8.32 13.79 0.45 1.18 0.73
23h 2.99 322.09 20.57 6.75 2.78 -3.97

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 26.37 6.1 2.99 -2.11 -3.14 -1.03
Ebov 11.27 8.32 322.09 -0.44 4.84 5.27
Marv 16.79 13.79 20.57 -0.28 0.29 0.58

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 68.21 66.01 47.72 -0.05 -0.52 -0.47
7h 52.74 91.89 54.7 0.8 0.05 -0.75
23h 99.94 346.18 102.47 1.79 0.04 -1.76

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 68.21 52.74 99.94 -0.37 0.55 0.92
Ebov 66.01 91.89 346.18 0.48 2.39 1.91
Marv 47.72 54.7 102.47 0.2 1.1 0.91