FOSL1
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| FOSL1 | FRA, FOS-Like Antigen 1,fra-1 | FOS-like antigen 1 | NM_005438 |  |
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Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
The Fos gene family consists of 4 members: FOS, FOSB, FOSL1, and FOSL2. These genes encode leucine zipper proteins that can dimerize with proteins of the JUN family, thereby forming the transcription factor complex AP-1. As such, the FOS proteins have been implicated as regulators of cell proliferation, differentiation, and transformation.
The gene FOSL1 is only expressed in human cells cells 23 h after infection with Ebola, but throughout all bat cells datasets.
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\igvfigure{ \beginfigure[H] \centering \includegraphics[width=\textwidth]../../input/holy_folders/hg19.apg.00016/snapshots//hg19.apg.00016_igv.eps % \caption\igv of gene FOSL1. Expression only in Ebola 23 h dataset. % <- say something about the figure here \endfigure }
\sashimifigure{ \beginfigure[H] \centering \includegraphics[width=\textwidth]../../input/holy_folders/hg19.apg.00016/snapshots//hg19.apg.00016_sashimi.eps % \caption\sashimi of gene FOSL1. % <- say something about the figure here \endfigure }
\ucscfigure{ \beginfigure[H] \centering \includegraphics[width=\textwidth]../../input/holy_folders/hg19.apg.00016/snapshots//hg19.apg.00016_ucsc.eps % \caption\ucsc of gene FOSL1. Expression only in Ebola 23 h dataset. % <- say something about the figure here \endfigure }
\setcounterfigure0 \enddocument
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 2 | 1 | 2 | 2 | 4 | 23 | 2 | 4 | 5 |
Read_Max |  | R. aegyptiacus | Transcriptome | 200 | 236 | 185 | 233 | 225 | 468 | 158 | 234 | 338 |
Read_Max |  | R. aegyptiacus | Genome | 225 | 250 | 167 | 225 | 201 | 286 | 137 | 306 | 374 |
DESeq | | H. sapiens | Genome | 3.03 | 1.0 | 4.97 | 3.28 | 9.13 | 173.39 | 10.65 | 15.39 | 35.8 |
DESeq | | R. aegyptiacus | Transcriptome | 998.25 | 1200.97 | 1176.12 | 1107.13 | 1178.22 | 2332.54 | 969.91 | 1000.71 | 1404.91 |
DESeq | | R. aegyptiacus | Genome | 1940.5 | 2015.21 | 2058.61 | 2269.24 | 2099.45 | 4003.69 | 1858.85 | 1808.71 | 2583.13 |