FAM49A

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
FAM49A	Family With Sequence Similarity 49, Member A,DKFZP566A1524, FLJ11080	family with sequence similarity 49, member A	NM_030797	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Homo sapiens family with sequence similarity 49, member A (FAM49A), mRNA.

Low expression in human cells, no homologs found in bat cells.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	31	23	39	21	30	32	35	33	40
Read_Max		R. aegyptiacus	Transcriptome	NA	NA	NA	NA	NA	NA	NA	NA	NA
Read_Max		R. aegyptiacus	Genome	0	0	0	0	0	0	0	0	0
DESeq		H. sapiens	Genome	129.88	107.07	129.07	174.38	136.76	3.63	150.12	129.7	144.53
DESeq		R. aegyptiacus	Transcriptome	NA	NA	NA	NA	NA	NA	NA	NA	NA
DESeq		R. aegyptiacus	Genome	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	129.88	174.38	150.12	0.43	0.21	-0.22
7h	107.07	136.76	129.7	0.35	0.28	-0.08
23h	129.07	3.63	144.53	-5.15	0.16	5.32

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	129.88	107.07	129.07	-0.28	-0.01	0.27
Ebov	174.38	136.76	3.63	-0.35	-5.59	-5.24
Marv	150.12	129.7	144.53	-0.21	-0.05	0.16

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	NA	NA	NA	NA	NA	NA
7h	NA	NA	NA	NA	NA	NA
23h	NA	NA	NA	NA	NA	NA

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	NA	NA	NA	NA	NA	NA
Ebov	NA	NA	NA	NA	NA	NA
Marv	NA	NA	NA	NA	NA	NA