HES4

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
HES4 bHLHb42 hes family bHLH transcription factor 4 NM_021170 pdf NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Homo sapiens hes family bHLH transcription factor 4 (HES4), transcript variant 2, mRNA

Very lowly expressed gene.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome7 4 2 5 4 24 3 4 7
Read_Max
batR. aegyptiacusTranscriptome 15 13 4 7 6 5 11 7 9
Read_Max
bat_genomeR. aegyptiacusGenome 23 13 5 17 7 3 10 13 13
DESeq
humanH. sapiensGenome 14.19 9.16 2.99 21.53 12.38 76.01 8.89 11.39 33.62
DESeq
batR. aegyptiacusTranscriptome 28.72 33.68 10.77 21.14 18.52 15.11 26.59 16.7 17.62
DESeq
bat_genomeR. aegyptiacusGenome 58.44 31.03 21.2 50.36 26.79 15.66 38.23 34.1 48.8

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 14.19 21.53 8.89 0.6 -0.67 -1.28
7h 9.16 12.38 11.39 0.43 0.31 -0.12
23h 2.99 76.01 33.62 4.67 3.49 -1.18

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 14.19 9.16 2.99 -0.63 -2.25 -1.62
Ebov 21.53 12.38 76.01 -0.8 1.82 2.62
Marv 8.89 11.39 33.62 0.36 1.92 1.56

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 28.72 21.14 26.59 -0.44 -0.11 0.33
7h 33.68 18.52 16.7 -0.86 -1.01 -0.15
23h 10.77 15.11 17.62 0.49 0.71 0.22

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 28.72 33.68 10.77 0.23 -1.42 -1.64
Ebov 21.14 18.52 15.11 -0.19 -0.48 -0.29
Marv 26.59 16.7 17.62 -0.67 -0.59 0.08