HES4

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
HES4	bHLHb42	hes family bHLH transcription factor 4	NM_021170	pdf		NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Homo sapiens hes family bHLH transcription factor 4 (HES4), transcript variant 2, mRNA

Very lowly expressed gene.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	7	4	2	5	4	24	3	4	7
Read_Max		R. aegyptiacus	Transcriptome	15	13	4	7	6	5	11	7	9
Read_Max		R. aegyptiacus	Genome	23	13	5	17	7	3	10	13	13
DESeq		H. sapiens	Genome	14.19	9.16	2.99	21.53	12.38	76.01	8.89	11.39	33.62
DESeq		R. aegyptiacus	Transcriptome	28.72	33.68	10.77	21.14	18.52	15.11	26.59	16.7	17.62
DESeq		R. aegyptiacus	Genome	58.44	31.03	21.2	50.36	26.79	15.66	38.23	34.1	48.8

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	14.19	21.53	8.89	0.6	-0.67	-1.28
7h	9.16	12.38	11.39	0.43	0.31	-0.12
23h	2.99	76.01	33.62	4.67	3.49	-1.18

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	14.19	9.16	2.99	-0.63	-2.25	-1.62
Ebov	21.53	12.38	76.01	-0.8	1.82	2.62
Marv	8.89	11.39	33.62	0.36	1.92	1.56

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	28.72	21.14	26.59	-0.44	-0.11	0.33
7h	33.68	18.52	16.7	-0.86	-1.01	-0.15
23h	10.77	15.11	17.62	0.49	0.71	0.22

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	28.72	33.68	10.77	0.23	-1.42	-1.64
Ebov	21.14	18.52	15.11	-0.19	-0.48	-0.29
Marv	26.59	16.7	17.62	-0.67	-0.59	0.08