LOC100130950

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
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Description

This is the locus of an uncharacterized non-coding RNA, which is anti-sense to C17orf87.

The ncRNA is only slightly expressed or not at all in all samples as the expression pattern does not fit to the ensemble annotation in human cells. The ncRNA was not found to be transcribed in bat cells.

Show legend

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome5 3 4 5 4 3 5 3 3
Read_Max
batR. aegyptiacusTranscriptome NA NA NA NA NA NA NA NA NA
Read_Max
bat_genomeR. aegyptiacusGenome NA NA NA NA NA NA NA NA NA
DESeq
humanH. sapiensGenome 48.69 38.74 41.71 47.77 34.33 2.32 43.98 32.17 26.01
DESeq
batR. aegyptiacusTranscriptome NA NA NA NA NA NA NA NA NA
DESeq
bat_genomeR. aegyptiacusGenome NA NA NA NA NA NA NA NA NA

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 48.69 47.77 43.98 -0.03 -0.15 -0.12
7h 38.74 34.33 32.17 -0.17 -0.27 -0.09
23h 41.71 2.32 26.01 -4.17 -0.68 3.49

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 48.69 38.74 41.71 -0.33 -0.22 0.11
Ebov 47.77 34.33 2.32 -0.48 -4.36 -3.89
Marv 43.98 32.17 26.01 -0.45 -0.76 -0.31

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h NA NA NA NA NA NA
7h NA NA NA NA NA NA
23h NA NA NA NA NA NA

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock NA NA NA NA NA NA
Ebov NA NA NA NA NA NA
Marv NA NA NA NA NA NA