PPFIA4

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
PPFIA4	BC144262, KIAA0897, NM_015053, NP_055868, O75335-2	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4	NM_015053	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Homo sapiens protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 (PPFIA4), mRNA.

Very low expression.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	3	4	7	2	6	10	3	5	5
Read_Max		R. aegyptiacus	Transcriptome	7	5	10	4	9	11	3	7	6
Read_Max		R. aegyptiacus	Genome	7	7	8	6	9	7	4	10	9
DESeq		H. sapiens	Genome	6.07	25.48	164.82	27.24	65.22	87.85	29.07	34.57	90.16
DESeq		R. aegyptiacus	Transcriptome	22.0	15.52	71.85	32.13	34.95	30.51	17.69	24.13	29.87
DESeq		R. aegyptiacus	Genome	102.27	168.85	318.0	82.95	169.65	125.32	76.47	144.32	232.03

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	6.07	27.24	29.07	2.17	2.26	0.09
7h	25.48	65.22	34.57	1.36	0.44	-0.92
23h	164.82	87.85	90.16	-0.91	-0.87	0.04

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	6.07	25.48	164.82	2.07	4.76	2.69
Ebov	27.24	65.22	87.85	1.26	1.69	0.43
Marv	29.07	34.57	90.16	0.25	1.63	1.38

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	22.0	32.13	17.69	0.55	-0.31	-0.86
7h	15.52	34.95	24.13	1.17	0.64	-0.53
23h	71.85	30.51	29.87	-1.24	-1.27	-0.03

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	22.0	15.52	71.85	-0.5	1.71	2.21
Ebov	32.13	34.95	30.51	0.12	-0.07	-0.2
Marv	17.69	24.13	29.87	0.45	0.76	0.31