PRSS35
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| PRSS35 | MGC46520, dJ223E3.1 | protease, serine, 35 | NM_153362 |  |
NONE |  |
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Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
Homo sapiens protease, serine, 35 (PRSS35), transcript variant 1. The proteolytic activity of PRSS35 is not characterized so far, but it possess general features of serine protease, however the canonical Ser is replaced by a threonine in PRSS35~\citemiyakoshi06identification.
The gene is transcribed weakly in human cells and highly in bat cells. 23 h after infection the gene is downregulated, in human cells it is shut down completely.
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 7 | 4 | 5 | 5 | 8 | 2 | 10 | 10 | 8 |
Read_Max |  | R. aegyptiacus | Transcriptome | NA | NA | NA | NA | NA | NA | NA | NA | NA |
Read_Max |  | R. aegyptiacus | Genome | 172 | 204 | 203 | 136 | 125 | 57 | 92 | 279 | 214 |
DESeq | | H. sapiens | Genome | 38.55 | 20.38 | 15.89 | 34.08 | 40.83 | 3.63 | 43.11 | 56.16 | 70.59 |
DESeq | | R. aegyptiacus | Transcriptome | NA | NA | NA | NA | NA | NA | NA | NA | NA |
DESeq | | R. aegyptiacus | Genome | 1326.04 | 1840.89 | 2439.09 | 1441.73 | 1659.69 | 823.71 | 1322.45 | 1705.63 | 1618.2 |