MAP1A
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| MAP1A | MAP1L | microtubule-associated protein 1A | NM_002373 |  |
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Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
This gene encodes a protein that belongs to the microtubule-associated protein family. The proteins of this family are thought to be involved in microtubule assembly, which is an essential step in neurogenesis. The product of this gene is a precursor polypeptide that presumably undergoes proteolytic processing to generate the final MAP1A heavy chain and LC2 light chain. Expression of this gene is almost exclusively in the brain. Studies of the rat microtubule-associated protein 1A gene suggested a role in early events of spinal cord development.
It seems to be downregulated in human cells 23 h after Ebola infection but is constantly expressed in bat cells.
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 77 | 160 | 95 | 96 | 179 | 18 | 107 | 243 | 244 |
Read_Max |  | R. aegyptiacus | Transcriptome | 303 | 268 | 303 | 376 | 315 | 228 | 207 | 369 | 443 |
Read_Max |  | R. aegyptiacus | Genome | 341 | 386 | 238 | 250 | 243 | 134 | 176 | 416 | 470 |
DESeq | | H. sapiens | Genome | 3127.56 | 4565.95 | 2717.37 | 2910.88 | 4577.91 | 318.14 | 3107.18 | 6371.02 | 8312.68 |
DESeq | | R. aegyptiacus | Transcriptome | 7494.21 | 7123.64 | 9335.98 | 8808.81 | 9059.58 | 6370.71 | 6274.97 | 8032.57 | 9418.11 |
DESeq | | R. aegyptiacus | Genome | 8073.11 | 8743.52 | 9163.88 | 8522.97 | 9800.77 | 7837.68 | 7678.31 | 8130.08 | 10610.78 |