LRRIQ4

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
LRRIQ4 Leucine-Rich Repeats And IQ Motif Containing 4, Leucine Rich Repeat Containing 64,LRRC64 leucine-rich repeats and IQ motif containing 4 NM_001080460 pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Homo sapiens leucine-rich repeats and IQ motif containing 4 (LRRIQ4), mRNA.

Low expression.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome4 3 4 4 4 2 3 4 3
Read_Max
batR. aegyptiacusTranscriptome 2 2 1 3 NA NA NA NA 2
Read_Max
bat_genomeR. aegyptiacusGenome 3 4 3 3 4 4 2 9 12
DESeq
humanH. sapiensGenome 17.24 13.24 13.91 28.38 21.32 2.32 17.67 20.98 31.45
DESeq
batR. aegyptiacusTranscriptome 2.68 2.82 2.22 3.75 1.0 1.0 1.0 1.0 2.75
DESeq
bat_genomeR. aegyptiacusGenome 12.03 22.82 20.08 24.69 31.25 23.5 16.87 19.03 55.65

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 17.24 28.38 17.67 0.72 0.04 -0.68
7h 13.24 21.32 20.98 0.69 0.66 -0.02
23h 13.91 2.32 31.45 -2.58 1.18 3.76

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 17.24 13.24 13.91 -0.38 -0.31 0.07
Ebov 28.38 21.32 2.32 -0.41 -3.61 -3.2
Marv 17.67 20.98 31.45 0.25 0.83 0.58

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 2.68 3.75 1.0 0.48 -1.42 -1.91
7h 2.82 1.0 1.0 -1.5 -1.5 0.0
23h 2.22 1.0 2.75 -1.15 0.31 1.46

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 2.68 2.82 2.22 0.07 -0.27 -0.35
Ebov 3.75 1.0 1.0 -1.91 -1.91 0.0
Marv 1.0 1.0 2.75 0.0 1.46 1.46