LRRIQ4

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
LRRIQ4	Leucine-Rich Repeats And IQ Motif Containing 4, Leucine Rich Repeat Containing 64,LRRC64	leucine-rich repeats and IQ motif containing 4	NM_001080460	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Homo sapiens leucine-rich repeats and IQ motif containing 4 (LRRIQ4), mRNA.

Low expression.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	4	3	4	4	4	2	3	4	3
Read_Max		R. aegyptiacus	Transcriptome	2	2	1	3	NA	NA	NA	NA	2
Read_Max		R. aegyptiacus	Genome	3	4	3	3	4	4	2	9	12
DESeq		H. sapiens	Genome	17.24	13.24	13.91	28.38	21.32	2.32	17.67	20.98	31.45
DESeq		R. aegyptiacus	Transcriptome	2.68	2.82	2.22	3.75	1.0	1.0	1.0	1.0	2.75
DESeq		R. aegyptiacus	Genome	12.03	22.82	20.08	24.69	31.25	23.5	16.87	19.03	55.65

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	17.24	28.38	17.67	0.72	0.04	-0.68
7h	13.24	21.32	20.98	0.69	0.66	-0.02
23h	13.91	2.32	31.45	-2.58	1.18	3.76

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	17.24	13.24	13.91	-0.38	-0.31	0.07
Ebov	28.38	21.32	2.32	-0.41	-3.61	-3.2
Marv	17.67	20.98	31.45	0.25	0.83	0.58

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	2.68	3.75	1.0	0.48	-1.42	-1.91
7h	2.82	1.0	1.0	-1.5	-1.5	0.0
23h	2.22	1.0	2.75	-1.15	0.31	1.46

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	2.68	2.82	2.22	0.07	-0.27	-0.35
Ebov	3.75	1.0	1.0	-1.91	-1.91	0.0
Marv	1.0	1.0	2.75	0.0	1.46	1.46