SH2D5

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
SH2D5 SH2 domain containing 5 XM_375698 pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

No information is available for gene SH2D5.

The expression levels of all 18 samples are very low.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome3 1 5 2 5 11 2 6 4
Read_Max
batR. aegyptiacusTranscriptome 4 3 5 8 4 9 4 6 6
Read_Max
bat_genomeR. aegyptiacusGenome 3 5 8 4 9 5 4 14 11
DESeq
humanH. sapiensGenome 7.09 7.12 27.81 7.84 24.58 151.02 14.16 44.96 17.31
DESeq
batR. aegyptiacusTranscriptome 9.4 8.26 22.99 21.14 14.14 44.63 12.12 18.35 19.37
DESeq
bat_genomeR. aegyptiacusGenome 19.77 44.72 84.8 41.47 62.5 93.99 23.62 75.33 79.63

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 7.09 7.84 14.16 0.15 1.0 0.85
7h 7.12 24.58 44.96 1.79 2.66 0.87
23h 27.81 151.02 17.31 2.44 -0.68 -3.13

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 7.09 7.12 27.81 0.01 1.97 1.97
Ebov 7.84 24.58 151.02 1.65 4.27 2.62
Marv 14.16 44.96 17.31 1.67 0.29 -1.38

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 9.4 21.14 12.12 1.17 0.37 -0.8
7h 8.26 14.14 18.35 0.78 1.15 0.38
23h 22.99 44.63 19.37 0.96 -0.25 -1.2

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 9.4 8.26 22.99 -0.19 1.29 1.48
Ebov 21.14 14.14 44.63 -0.58 1.08 1.66
Marv 12.12 18.35 19.37 0.6 0.68 0.08