LDHB

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
LDHB		lactate dehydrogenase B	NM_002300	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	3	2	4	7	3	2	10	7	21
Read_Max		R. aegyptiacus	Transcriptome	257	292	219	314	286	216	226	411	345
Read_Max		R. aegyptiacus	Genome	325	323	170	276	228	123	211	475	362
DESeq		H. sapiens	Genome	7.09	7.12	7.95	12.41	5.88	3.63	15.04	21.78	57.54
DESeq		R. aegyptiacus	Transcriptome	1508.21	1653.0	1912.7	2029.21	2106.86	1448.43	1784.19	2107.83	2071.44
DESeq		R. aegyptiacus	Genome	1554.64	1953.15	1700.45	1777.47	2023.55	1498.61	1857.73	1966.51	1892.18

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	7.09	12.41	15.04	0.81	1.08	0.28
7h	7.12	5.88	21.78	-0.28	1.61	1.89
23h	7.95	3.63	57.54	-1.13	2.86	3.99

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	7.09	7.12	7.95	0.01	0.17	0.16
Ebov	12.41	5.88	3.63	-1.08	-1.77	-0.7
Marv	15.04	21.78	57.54	0.53	1.94	1.4

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	1508.21	2029.21	1784.19	0.43	0.24	-0.19
7h	1653.0	2106.86	2107.83	0.35	0.35	0.0
23h	1912.7	1448.43	2071.44	-0.4	0.12	0.52

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	1508.21	1653.0	1912.7	0.13	0.34	0.21
Ebov	2029.21	2106.86	1448.43	0.05	-0.49	-0.54
Marv	1784.19	2107.83	2071.44	0.24	0.22	-0.03