EID2B

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
EID2B EID2B_HUMAN, EID3, NM_152361, NP_689574, Q8N8S0, Q96D98,EID-3, FLJ38944 EP300 interacting inhibitor of differentiation 2B NM_152361 pdf NONE NONE NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Homo sapiens EP300 interacting inhibitor of differentiation 2B (EID2B) mRNA acts as a repressor of MYOD-dependent transcription, glucocorticoid receptor-dependent transcription, and muscle differentiation.

Just a very slight equal expression in all hg19 samples except the marburg infected ones (low upregulation) could be observed. Onto the RAE homolog no read was mapped

Show legend

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome13 7 11 9 8 3 19 15 6
Read_Max
batR. aegyptiacusTranscriptome NA NA NA NA NA NA NA NA NA
Read_Max
bat_genomeR. aegyptiacusGenome NA NA NA NA NA NA NA NA NA
DESeq
humanH. sapiensGenome 79.14 36.7 51.63 51.19 38.4 3.63 65.91 57.75 36.88
DESeq
batR. aegyptiacusTranscriptome NA NA NA NA NA NA NA NA NA
DESeq
bat_genomeR. aegyptiacusGenome NA NA NA NA NA NA NA NA NA

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 79.14 51.19 65.91 -0.63 -0.26 0.36
7h 36.7 38.4 57.75 0.07 0.65 0.59
23h 51.63 3.63 36.88 -3.83 -0.49 3.34

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 79.14 36.7 51.63 -1.11 -0.62 0.49
Ebov 51.19 38.4 3.63 -0.41 -3.82 -3.4
Marv 65.91 57.75 36.88 -0.19 -0.84 -0.65

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h NA NA NA NA NA NA
7h NA NA NA NA NA NA
23h NA NA NA NA NA NA

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock NA NA NA NA NA NA
Ebov NA NA NA NA NA NA
Marv NA NA NA NA NA NA