JUNB

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
JUNB jun B proto-oncogene NM_002229 pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Homo sapiens jun B proto-oncogene (JUNB), mRNA. Transcription factor involved in regulating gene activity following the primary growth factor response. Binds to the DNA sequence 5'-TGA[CG]TCA-3'.

Upregulation within bat cells and human cells within Ebola and Marburg infection after 23 h.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome17 11 14 12 14 156 13 14 17
Read_Max
batR. aegyptiacusTranscriptome NA NA NA NA NA NA NA NA NA
Read_Max
bat_genomeR. aegyptiacusGenome 58 53 88 68 46 93 38 67 133
DESeq
humanH. sapiensGenome 128.86 64.23 101.28 107.08 80.67 1293.24 79.07 82.53 108.65
DESeq
batR. aegyptiacusTranscriptome NA NA NA NA NA NA NA NA NA
DESeq
bat_genomeR. aegyptiacusGenome 396.18 425.31 706.29 524.35 495.56 1197.06 384.59 415.5 755.16

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 128.86 107.08 79.07 -0.27 -0.7 -0.44
7h 64.23 80.67 82.53 0.33 0.36 0.03
23h 101.28 1293.24 108.65 3.67 0.1 -3.57

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 128.86 64.23 101.28 -1.0 -0.35 0.66
Ebov 107.08 80.67 1293.24 -0.41 3.59 4.0
Marv 79.07 82.53 108.65 0.06 0.46 0.4

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h NA NA NA NA NA NA
7h NA NA NA NA NA NA
23h NA NA NA NA NA NA

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock NA NA NA NA NA NA
Ebov NA NA NA NA NA NA
Marv NA NA NA NA NA NA