VASH2

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
VASH2	vasohibin 2,FLJ12505	vasohibin 2	NM_024749	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Angiogenesis inhibitor. Inhibits network formation by endothelial cells.

Expression seems reduced in 23 h post infection samples, both Ebola and Marburg in human cells. In bat cells the expression shows a quite heterogenouse pattern.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	37	35	39	33	55	6	30	50	50
Read_Max		R. aegyptiacus	Transcriptome	559	495	486	512	487	658	352	565	715
Read_Max		R. aegyptiacus	Genome	1137	1746	1439	822	1445	1316	1055	2531	2641
DESeq		H. sapiens	Genome	483.02	591.51	791.29	484.65	717.21	62.85	418.55	613.3	936.12
DESeq		R. aegyptiacus	Transcriptome	1155.35	1208.23	1678.17	1305.83	1519.89	1720.46	1190.16	1234.53	1701.43
DESeq		R. aegyptiacus	Genome	13600.71	20518.98	23776.11	13616.41	24339.53	28775.15	18469.31	21273.15	25307.31

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	483.02	484.65	418.55	0.0	-0.21	-0.21
7h	591.51	717.21	613.3	0.28	0.05	-0.23
23h	791.29	62.85	936.12	-3.65	0.24	3.9

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	483.02	591.51	791.29	0.29	0.71	0.42
Ebov	484.65	717.21	62.85	0.57	-2.95	-3.51
Marv	418.55	613.3	936.12	0.55	1.16	0.61

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	1155.35	1305.83	1190.16	0.18	0.04	-0.13
7h	1208.23	1519.89	1234.53	0.33	0.03	-0.3
23h	1678.17	1720.46	1701.43	0.04	0.02	-0.02

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	1155.35	1208.23	1678.17	0.06	0.54	0.47
Ebov	1305.83	1519.89	1720.46	0.22	0.4	0.18
Marv	1190.16	1234.53	1701.43	0.05	0.52	0.46