LOC100652741

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
LOC100652741				pdf			NONE	NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Not described locus, located upstream of a cluster of genes.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	37	34	31	35	47	322	41	50	29
Read_Max		R. aegyptiacus	Transcriptome	NA	NA	NA	NA	NA	NA	NA	NA	NA
Read_Max		R. aegyptiacus	Genome	NA	NA	NA	NA	NA	NA	NA	NA	NA
DESeq		H. sapiens	Genome	560.15	491.56	448.76	599.86	479.02	5047.56	604.52	664.46	479.43
DESeq		R. aegyptiacus	Transcriptome	NA	NA	NA	NA	NA	NA	NA	NA	NA
DESeq		R. aegyptiacus	Genome	NA	NA	NA	NA	NA	NA	NA	NA	NA

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	560.15	599.86	604.52	0.1	0.11	0.01
7h	491.56	479.02	664.46	-0.04	0.43	0.47
23h	448.76	5047.56	479.43	3.49	0.1	-3.4

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	560.15	491.56	448.76	-0.19	-0.32	-0.13
Ebov	599.86	479.02	5047.56	-0.32	3.07	3.4
Marv	604.52	664.46	479.43	0.14	-0.33	-0.47

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	NA	NA	NA	NA	NA	NA
7h	NA	NA	NA	NA	NA	NA
23h	NA	NA	NA	NA	NA	NA

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	NA	NA	NA	NA	NA	NA
Ebov	NA	NA	NA	NA	NA	NA
Marv	NA	NA	NA	NA	NA	NA