ST6GAL1
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| ST6GAL1 | SIAT1, B-Cell Antigen CD75 | ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 | NM_173216 |  |
NONE |  |
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Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
This gene encodes a member of glycosyltransferase family 29. The encoded protein is a type II membrane protein that catalyzes the transfer of sialic acid from CMP-sialic acid to galactose-containing substrates. The protein, which is normally found in the Golgi but can be proteolytically processed to a soluble form, is involved in the generation of the cell-surface carbohydrate determinants and differentiation antigens HB-6, CD75, and CD76. This gene has been incorrectly referred to as CD75. Three transcript variants encoding two different isoforms have been described.
The gene ST6GAL1 is well expressed throughout human cells datasets, except for cells after 23 h Ebola infection, where almost no expression is detectable.
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 824 | 853 | 897 | 680 | 903 | 110 | 878 | 1147 | 662 |
Read_Max |  | R. aegyptiacus | Transcriptome | 54 | 27 | 26 | 27 | 30 | 25 | 23 | 42 | 26 |
Read_Max |  | R. aegyptiacus | Genome | 67 | 48 | 34 | 41 | 32 | 20 | 28 | 69 | 54 |
DESeq | | H. sapiens | Genome | 14795.58 | 14097.68 | 16164.19 | 14312.01 | 13313.07 | 1491.94 | 13749.43 | 14061.57 | 13422.12 |
DESeq | | R. aegyptiacus | Transcriptome | 227.0 | 181.63 | 175.68 | 201.53 | 220.02 | 169.1 | 199.01 | 206.73 | 191.69 |
DESeq | | R. aegyptiacus | Genome | 824.16 | 789.47 | 794.43 | 749.5 | 795.8 | 791.08 | 739.94 | 834.18 | 785.13 |