BCAR1

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
BCAR1 CAS,P130Cas, Crkas, CAS, CASS1 breast cancer anti-estrogen resistance 1 NM_014567 pdf NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

BCAR1, or CAS, is an Src (MIM 190090) family kinase substrate involved in various cellular events, including migration, survival, transformation, and invasion.

This gene seems to be overexpressed in the human cells Ebola 23 h sample. In the bat cells data the gene seems to be expressed equally over the time points.

Show legend

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome111 74 52 83 86 782 110 138 86
Read_Max
batR. aegyptiacusTranscriptome NA NA NA NA NA NA NA NA NA
Read_Max
bat_genomeR. aegyptiacusGenome 357 347 255 322 276 165 189 526 440
DESeq
humanH. sapiensGenome 1852.99 1886.75 1331.39 1871.72 1546.42 10992.9 1808.92 2168.04 2136.55
DESeq
batR. aegyptiacusTranscriptome NA NA NA NA NA NA NA NA NA
DESeq
bat_genomeR. aegyptiacusGenome 4825.48 5948.88 6922.29 5924.9 5994.75 5117.21 4687.05 5900.31 6277.6

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 1852.99 1871.72 1808.92 0.01 -0.03 -0.05
7h 1886.75 1546.42 2168.04 -0.29 0.2 0.49
23h 1331.39 10992.9 2136.55 3.05 0.68 -2.36

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 1852.99 1886.75 1331.39 0.03 -0.48 -0.5
Ebov 1871.72 1546.42 10992.9 -0.28 2.55 2.83
Marv 1808.92 2168.04 2136.55 0.26 0.24 -0.02

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h NA NA NA NA NA NA
7h NA NA NA NA NA NA
23h NA NA NA NA NA NA

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock NA NA NA NA NA NA
Ebov NA NA NA NA NA NA
Marv NA NA NA NA NA NA