PSAT1

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
PSAT1	EPIP,PSA	phosphoserine aminotransferase 1	NM_021154	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Homo sapiens phosphoserine aminotransferase 1

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	810	884	1074	759	1189	195	956	1123	948
Read_Max		R. aegyptiacus	Transcriptome	182	169	198	209	158	196	128	188	340
Read_Max		R. aegyptiacus	Genome	191	204	170	159	128	115	102	242	368
DESeq		H. sapiens	Genome	8776.88	9399.13	13023.88	8163.73	10111.67	1711.7	7941.46	8712.32	11592.12
DESeq		R. aegyptiacus	Transcriptome	1090.66	1020.34	1720.92	1290.26	1358.91	1638.34	1082.26	1327.89	2004.96
DESeq		R. aegyptiacus	Genome	1309.71	1580.77	2030.72	1290.64	1722.19	2058.63	1375.3	1652.5	2605.39

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	8776.88	8163.73	7941.46	-0.1	-0.14	-0.04
7h	9399.13	10111.67	8712.32	0.11	-0.11	-0.21
23h	13023.88	1711.7	11592.12	-2.93	-0.17	2.76

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	8776.88	9399.13	13023.88	0.1	0.57	0.47
Ebov	8163.73	10111.67	1711.7	0.31	-2.25	-2.56
Marv	7941.46	8712.32	11592.12	0.13	0.55	0.41

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	1090.66	1290.26	1082.26	0.24	-0.01	-0.25
7h	1020.34	1358.91	1327.89	0.41	0.38	-0.03
23h	1720.92	1638.34	2004.96	-0.07	0.22	0.29

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	1090.66	1020.34	1720.92	-0.1	0.66	0.75
Ebov	1290.26	1358.91	1638.34	0.07	0.34	0.27
Marv	1082.26	1327.89	2004.96	0.3	0.89	0.59