NCRNA00261

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
NCRNA00261	LINC00261			pdf			NONE	NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Homo sapiens long intergenic non-protein coding RNA 261 (LINC00261), non-coding RNA.

This gene is strongly down-regulated in Ebola infected human cells at 23 h.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	483	424	412	418	519	97	519	474	528
Read_Max		R. aegyptiacus	Transcriptome	NA	NA	NA	NA	NA	NA	NA	NA	NA
Read_Max		R. aegyptiacus	Genome	NA	NA	NA	NA	NA	NA	NA	NA	NA
DESeq		H. sapiens	Genome	11761.36	8267.07	7494.84	10701.75	8015.07	1791.97	11399.4	8122.4	10618.94
DESeq		R. aegyptiacus	Transcriptome	NA	NA	NA	NA	NA	NA	NA	NA	NA
DESeq		R. aegyptiacus	Genome	NA	NA	NA	NA	NA	NA	NA	NA	NA

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	11761.36	10701.75	11399.4	-0.14	-0.05	0.09
7h	8267.07	8015.07	8122.4	-0.04	-0.03	0.02
23h	7494.84	1791.97	10618.94	-2.06	0.5	2.57

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	11761.36	8267.07	7494.84	-0.51	-0.65	-0.14
Ebov	10701.75	8015.07	1791.97	-0.42	-2.58	-2.16
Marv	11399.4	8122.4	10618.94	-0.49	-0.1	0.39

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	NA	NA	NA	NA	NA	NA
7h	NA	NA	NA	NA	NA	NA
23h	NA	NA	NA	NA	NA	NA

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	NA	NA	NA	NA	NA	NA
Ebov	NA	NA	NA	NA	NA	NA
Marv	NA	NA	NA	NA	NA	NA