CHD2

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
CHD2	FLJ38614, DKFZp547I1315, DKFZp781D1727, DKFZp686E01200	chromodomain helicase DNA binding protein 2	NM_001271	pdf			NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Chromatin organization modifier. Differential splicing on Marburg infected cells.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	83	151	180	98	253	708	108	196	160
Read_Max		R. aegyptiacus	Transcriptome	138	102	133	116	98	170	82	130	165
Read_Max		R. aegyptiacus	Genome	159	135	124	98	87	106	68	158	192
DESeq		H. sapiens	Genome	3628.86	6135.54	7689.43	4609.36	7641.92	26789.23	4089.65	5801.89	6776.26
DESeq		R. aegyptiacus	Transcriptome	3077.59	2689.58	3886.71	3094.13	2988.41	4461.34	2610.7	3017.49	2983.76
DESeq		R. aegyptiacus	Genome	4754.15	4976.87	6080.99	4308.39	4711.2	6339.07	4042.69	4856.79	4468.46

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	3628.86	4609.36	4089.65	0.35	0.17	-0.17
7h	6135.54	7641.92	5801.89	0.32	-0.08	-0.4
23h	7689.43	26789.23	6776.26	1.8	-0.18	-1.98

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	3628.86	6135.54	7689.43	0.76	1.08	0.33
Ebov	4609.36	7641.92	26789.23	0.73	2.54	1.81
Marv	4089.65	5801.89	6776.26	0.5	0.73	0.22

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	3077.59	3094.13	2610.7	0.01	-0.24	-0.25
7h	2689.58	2988.41	3017.49	0.15	0.17	0.01
23h	3886.71	4461.34	2983.76	0.2	-0.38	-0.58

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	3077.59	2689.58	3886.71	-0.19	0.34	0.53
Ebov	3094.13	2988.41	4461.34	-0.05	0.53	0.58
Marv	2610.7	3017.49	2983.76	0.21	0.19	-0.02