AGT

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
AGT ANHU, SERPINA8 angiotensinogen (serpin peptidase inhibitor, clade A, member 8) NM_000029 pdf NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Component of the renin-angiotensin system (RAS), regulator of blood pressure, body fluid and electrolyte homeostasis. Interesting splicing in ebola infected samples.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome1476 2218 1558 2025 1950 437 2477 2883 973
Read_Max
batR. aegyptiacusTranscriptome NA NA NA NA NA NA NA NA NA
Read_Max
bat_genomeR. aegyptiacusGenome 1 2 2 2 2 2 1 4 2
DESeq
humanH. sapiensGenome 16043.77 20451.49 17565.06 20545.84 16747.79 3564.52 19331.96 21048.7 11508.39
DESeq
batR. aegyptiacusTranscriptome NA NA NA NA NA NA NA NA NA
DESeq
bat_genomeR. aegyptiacusGenome 4.3 6.39 14.51 3.95 8.93 13.05 2.25 4.76 10.27

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 16043.77 20545.84 19331.96 0.36 0.27 -0.09
7h 20451.49 16747.79 21048.7 -0.29 0.04 0.33
23h 17565.06 3564.52 11508.39 -2.3 -0.61 1.69

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 16043.77 20451.49 17565.06 0.35 0.13 -0.22
Ebov 20545.84 16747.79 3564.52 -0.29 -2.53 -2.23
Marv 19331.96 21048.7 11508.39 0.12 -0.75 -0.87

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h NA NA NA NA NA NA
7h NA NA NA NA NA NA
23h NA NA NA NA NA NA

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock NA NA NA NA NA NA
Ebov NA NA NA NA NA NA
Marv NA NA NA NA NA NA