TRIM45

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
TRIM45	NM_025188, NP_079464, Q53GN0, Q5T2K4, Q5T2K5, Q8IYV6, Q9H8W5, RNF99, TRI45_HUMAN,FLJ13181	tripartite motif containing 45	NM_025188	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

This gene encodes a member of the tripartite motif family. The encodedprotein may function as a transcriptional repressor of themitogen-activated protein kinase pathway. Alternatively splicedtranscript variants have been described.

The gene was only very low expressed.

Show legend

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source	Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max	H. sapiens	Genome	20	14	16	11	19	10	15	17	6
Read_Max	R. aegyptiacus	Transcriptome	29	46	35	29	29	30	14	54	37
Read_Max	R. aegyptiacus	Genome	43	42	36	37	25	23	18	55	49
DESeq	H. sapiens	Genome	147.13	137.66	161.84	148.15	149.77	31.27	163.28	150.48	68.42
DESeq	R. aegyptiacus	Transcriptome	169.87	263.32	302.72	239.07	247.4	226.84	127.81	255.47	188.19
DESeq	R. aegyptiacus	Genome	318.83	443.56	540.04	451.28	408.5	362.9	238.4	404.4	377.58

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	147.13	148.15	163.28	0.01	0.15	0.14
7h	137.66	149.77	150.48	0.12	0.13	0.01
23h	161.84	31.27	68.42	-2.37	-1.24	1.13

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	147.13	137.66	161.84	-0.1	0.14	0.23
Ebov	148.15	149.77	31.27	0.02	-2.24	-2.26
Marv	163.28	150.48	68.42	-0.12	-1.25	-1.14

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	169.87	239.07	127.81	0.49	-0.41	-0.9
7h	263.32	247.4	255.47	-0.09	-0.04	0.05
23h	302.72	226.84	188.19	-0.42	-0.69	-0.27

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	169.87	263.32	302.72	0.63	0.83	0.2
Ebov	239.07	247.4	226.84	0.05	-0.08	-0.13
Marv	127.81	255.47	188.19	1.0	0.56	-0.44

Differential transcriptional responses to Ebola and Marburg virus infection in cells from bats and humans

Supplemental Material