SLC12A4
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| SLC12A4 | F5H0S9, F5H0S9_HUMAN, NM_001145963, NP_001139435,KCC1 | solute carrier family 12 (potassium/chloride transporter), member 4 | NM_005072 |  |
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Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
This gene encodes a member of the SLC12A transporter family. The encoded protein mediates the coupled movement of potassium and chloride ions across the plasma membrane.
This gene is expressed ubiquitously. The gene is upregulated in human cells Ebola infected cells after 23 h.
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 77 | 135 | 90 | 80 | 124 | 593 | 137 | 167 | 108 |
Read_Max |  | R. aegyptiacus | Transcriptome | 66 | 71 | 76 | 59 | 49 | 91 | 41 | 64 | 86 |
Read_Max |  | R. aegyptiacus | Genome | 127 | 121 | 122 | 122 | 95 | 110 | 57 | 219 | 218 |
DESeq | | H. sapiens | Genome | 1720.05 | 2325.29 | 2160.39 | 1709.74 | 2145.56 | 9049.28 | 1916.82 | 2460.6 | 2443.18 |
DESeq | | R. aegyptiacus | Transcriptome | 548.77 | 608.24 | 837.75 | 554.06 | 516.79 | 947.99 | 346.96 | 632.22 | 782.11 |
DESeq | | R. aegyptiacus | Genome | 1949.96 | 2199.57 | 2787.21 | 2320.59 | 1962.16 | 3489.36 | 1302.21 | 2209.15 | 2700.43 |