LOC641364

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
LOC641364	LINC00616 and SLC7A11-AS1 overlap			pdf				NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Overlaps with LINC00616 and SLC7A11-AS1.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	169	210	223	153	316	115	163	254	414
Read_Max		R. aegyptiacus	Transcriptome	NA	NA	NA	NA	NA	NA	NA	NA	NA
Read_Max		R. aegyptiacus	Genome	NA	NA	NA	NA	NA	NA	NA	NA	NA
DESeq		H. sapiens	Genome	2879.95	3518.54	4923.42	2460.31	4774.65	2440.72	2581.74	4231.96	11169.14
DESeq		R. aegyptiacus	Transcriptome	NA	NA	NA	NA	NA	NA	NA	NA	NA
DESeq		R. aegyptiacus	Genome	NA	NA	NA	NA	NA	NA	NA	NA	NA

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	2879.95	2460.31	2581.74	-0.23	-0.16	0.07
7h	3518.54	4774.65	4231.96	0.44	0.27	-0.17
23h	4923.42	2440.72	11169.14	-1.01	1.18	2.19

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	2879.95	3518.54	4923.42	0.29	0.77	0.48
Ebov	2460.31	4774.65	2440.72	0.96	-0.01	-0.97
Marv	2581.74	4231.96	11169.14	0.71	2.11	1.4

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	NA	NA	NA	NA	NA	NA
7h	NA	NA	NA	NA	NA	NA
23h	NA	NA	NA	NA	NA	NA

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	NA	NA	NA	NA	NA	NA
Ebov	NA	NA	NA	NA	NA	NA
Marv	NA	NA	NA	NA	NA	NA