CPEB4

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
CPEB4	ENSG00000113742,KIAA1673	cytoplasmic polyadenylation element binding protein 4	NM_030627	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

CPEB4 (cytoplasmic polyadenylation element binding protein 4) is a protein-coding gene. GO annotations related to this gene include RNA binding and nucleotide binding. An important paralog of this gene is CPEB2

Overall gene expression is constant throughout all samples

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source	Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max	H. sapiens	Genome	127	96	81	88	151	380	118	128	131
Read_Max	R. aegyptiacus	Transcriptome	127	138	138	133	119	174	98	131	177
Read_Max	R. aegyptiacus	Genome	152	142	125	117	108	133	125	198	251
DESeq	H. sapiens	Genome	3113.35	2340.59	2284.5	2898.34	2881.28	9908.58	2769.46	2166.44	4100.3
DESeq	R. aegyptiacus	Transcriptome	1450.24	1385.23	1839.41	1523.76	1553.84	2315.86	1508.31	1403.08	1790.65
DESeq	R. aegyptiacus	Genome	3563.89	3841.49	4463.11	3282.4	4330.6	6491.8	4147.27	3676.1	4737.31

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	3113.35	2898.34	2769.46	-0.1	-0.17	-0.07
7h	2340.59	2881.28	2166.44	0.3	-0.11	-0.41
23h	2284.5	9908.58	4100.3	2.12	0.84	-1.27

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	3113.35	2340.59	2284.5	-0.41	-0.45	-0.03
Ebov	2898.34	2881.28	9908.58	-0.01	1.77	1.78
Marv	2769.46	2166.44	4100.3	-0.35	0.57	0.92

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	1450.24	1523.76	1508.31	0.07	0.06	-0.01
7h	1385.23	1553.84	1403.08	0.17	0.02	-0.15
23h	1839.41	2315.86	1790.65	0.33	-0.04	-0.37

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	1450.24	1385.23	1839.41	-0.07	0.34	0.41
Ebov	1523.76	1553.84	2315.86	0.03	0.6	0.58
Marv	1508.31	1403.08	1790.65	-0.1	0.25	0.35

Differential transcriptional responses to Ebola and Marburg virus infection in cells from bats and humans

Supplemental Material