FNIP1

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
FNIP1 KIAA1961 folliculin interacting protein 1 NM_133372 pdf NONE

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Description

The gene FNIP1 is slightly upregulated in ebola 23h datasets, but shows no significant changes in expression. FNIP1 (folliculin interacting protein 1) is a protein-coding gene. GO annotations related to this gene include guanyl-nucleotide exchange factor activity. An important paralog of this gene is FNIP2.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome98 73 80 74 100 333 89 91 116
Read_Max
batR. aegyptiacusTranscriptome 152 110 91 116 115 217 108 154 132
Read_Max
bat_genomeR. aegyptiacusGenome 162 118 81 104 99 126 96 192 144
DESeq
humanH. sapiensGenome 2743.97 1784.76 2222.94 2055.37 2094.35 8684.77 1872.96 1459.81 3009.69
DESeq
batR. aegyptiacusTranscriptome 1691.36 1352.55 1292.16 1600.67 1510.03 2562.23 1477.16 1585.67 1306.07
DESeq
bat_genomeR. aegyptiacusGenome 3006.15 2835.71 2523.89 2421.31 2612.87 4477.56 2860.81 2726.94 2373.36

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 2743.97 2055.37 1872.96 -0.42 -0.55 -0.13
7h 1784.76 2094.35 1459.81 0.23 -0.29 -0.52
23h 2222.94 8684.77 3009.69 1.97 0.44 -1.53

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 2743.97 1784.76 2222.94 -0.62 -0.3 0.32
Ebov 2055.37 2094.35 8684.77 0.03 2.08 2.05
Marv 1872.96 1459.81 3009.69 -0.36 0.68 1.04

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 1691.36 1600.67 1477.16 -0.08 -0.2 -0.12
7h 1352.55 1510.03 1585.67 0.16 0.23 0.07
23h 1292.16 2562.23 1306.07 0.99 0.02 -0.97

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 1691.36 1352.55 1292.16 -0.32 -0.39 -0.07
Ebov 1600.67 1510.03 2562.23 -0.08 0.68 0.76
Marv 1477.16 1585.67 1306.07 0.1 -0.18 -0.28