FNIP1

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
FNIP1	KIAA1961	folliculin interacting protein 1	NM_133372	pdf		NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The gene FNIP1 is slightly upregulated in ebola 23h datasets, but shows no significant changes in expression. FNIP1 (folliculin interacting protein 1) is a protein-coding gene. GO annotations related to this gene include guanyl-nucleotide exchange factor activity. An important paralog of this gene is FNIP2.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source	Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max	H. sapiens	Genome	98	73	80	74	100	333	89	91	116
Read_Max	R. aegyptiacus	Transcriptome	152	110	91	116	115	217	108	154	132
Read_Max	R. aegyptiacus	Genome	162	118	81	104	99	126	96	192	144
DESeq	H. sapiens	Genome	2743.97	1784.76	2222.94	2055.37	2094.35	8684.77	1872.96	1459.81	3009.69
DESeq	R. aegyptiacus	Transcriptome	1691.36	1352.55	1292.16	1600.67	1510.03	2562.23	1477.16	1585.67	1306.07
DESeq	R. aegyptiacus	Genome	3006.15	2835.71	2523.89	2421.31	2612.87	4477.56	2860.81	2726.94	2373.36

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	2743.97	2055.37	1872.96	-0.42	-0.55	-0.13
7h	1784.76	2094.35	1459.81	0.23	-0.29	-0.52
23h	2222.94	8684.77	3009.69	1.97	0.44	-1.53

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	2743.97	1784.76	2222.94	-0.62	-0.3	0.32
Ebov	2055.37	2094.35	8684.77	0.03	2.08	2.05
Marv	1872.96	1459.81	3009.69	-0.36	0.68	1.04

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	1691.36	1600.67	1477.16	-0.08	-0.2	-0.12
7h	1352.55	1510.03	1585.67	0.16	0.23	0.07
23h	1292.16	2562.23	1306.07	0.99	0.02	-0.97

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	1691.36	1352.55	1292.16	-0.32	-0.39	-0.07
Ebov	1600.67	1510.03	2562.23	-0.08	0.68	0.76
Marv	1477.16	1585.67	1306.07	0.1	-0.18	-0.28

Differential transcriptional responses to Ebola and Marburg virus infection in cells from bats and humans

Supplemental Material