AK4

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
AK4 AK_4, AK3, AK3L1, AK3L2 adenylate kinase 4 NM_013410 pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Adenylate kinase 4 (EC:2.7.4.10 2.7.4.6). Purine metabolism pathway.Seems to be 7 times downregulated in human at 23 hours of Ebola infection.

Show legend

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome734 588 776 510 900 198 619 758 658
Read_Max
batR. aegyptiacusTranscriptome 2 NA 2 1 NA 5 NA 2 NA
Read_Max
bat_genomeR. aegyptiacusGenome 2 2 4 2 2 3 0 1 4
DESeq
humanH. sapiensGenome 9082.33 6876.98 8911.6 6647.76 8050.84 2286.76 6198.45 6442.17 8966.17
DESeq
batR. aegyptiacusTranscriptome 2.68 1.0 3.44 2.83 1.0 12.55 1.0 2.65 1.0
DESeq
bat_genomeR. aegyptiacusGenome 2.58 5.48 10.04 3.95 2.23 28.72 0.0 0.79 4.28

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 9082.33 6647.76 6198.45 -0.45 -0.55 -0.1
7h 6876.98 8050.84 6442.17 0.23 -0.09 -0.32
23h 8911.6 2286.76 8966.17 -1.96 0.01 1.97

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 9082.33 6876.98 8911.6 -0.4 -0.03 0.37
Ebov 6647.76 8050.84 2286.76 0.28 -1.54 -1.82
Marv 6198.45 6442.17 8966.17 0.06 0.53 0.48

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 2.68 2.83 1.0 0.08 -1.42 -1.5
7h 1.0 1.0 2.65 0.0 1.41 1.41
23h 3.44 12.55 1.0 1.87 -1.78 -3.65

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 2.68 1.0 3.44 -1.42 0.36 1.78
Ebov 2.83 1.0 12.55 -1.5 2.15 3.65
Marv 1.0 2.65 1.0 1.41 0.0 -1.41