RBPMS
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| RBPMS | HERMES | RNA binding protein with multiple splicing |  |
 |
 |
 |
Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
This gene encodes a member of the RNA recognition motif family of RNA-binding proteins. The RNA recognition motif is between 80-100 amino acids in length and family members contain one to four copies of the motif. The RNA recognition motif consists of two short stretches of conserved sequence, as well as a few highly conserved hydrophobic residues. The encoded protein has a single, putative RNA recognition motif in its N-terminus. The gene is upregulated exclusively in human EBOV 23h. Bat homologs show slightly decreasing expression in wt, EBOV and MARV.
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 128 | 145 | 114 | 99 | 157 | 525 | 143 | 153 | 146 |
Read_Max |  | R. aegyptiacus | Transcriptome | 218 | 180 | 127 | 155 | 138 | 144 | 141 | 203 | 160 |
Read_Max |  | R. aegyptiacus | Genome | 236 | 176 | 119 | 194 | 123 | 88 | 132 | 243 | 186 |
DESeq | | H. sapiens | Genome | 2152.35 | 1906.12 | 1906.23 | 1951.57 | 1946.39 | 7368.85 | 1964.18 | 2050.53 | 2668.26 |
DESeq | | R. aegyptiacus | Transcriptome | 578.18 | 581.01 | 577.57 | 568.71 | 570.45 | 582.28 | 613.94 | 628.92 | 622.04 |
DESeq | | R. aegyptiacus | Genome | 3154.82 | 2704.29 | 2870.9 | 2618.81 | 2414.2 | 2877.12 | 2712.37 | 2623.86 | 2671.32 |