PCF11
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| PCF11 | KIAA0824 | PCF11 cleavage and polyadenylation factor subunit | NM_015885 |  |
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Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
PCF11 is a component of pre-mRNA cleavage complex II.
Its expression shows an heterogeneous picture across the different samples. In human cells Ebola infected cells it is induced over the time course. In bat cells it is generally repressed in the course of the infection.
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 103 | 140 | 170 | 101 | 213 | 562 | 153 | 168 | 163 |
Read_Max |  | R. aegyptiacus | Transcriptome | 219 | 166 | 111 | 173 | 112 | 174 | 143 | 195 | 147 |
Read_Max |  | R. aegyptiacus | Genome | 247 | 183 | 94 | 176 | 95 | 98 | 124 | 236 | 164 |
DESeq | | H. sapiens | Genome | 2570.44 | 3033.08 | 3385.54 | 2726.09 | 3551.97 | 10438.89 | 2742.27 | 3079.3 | 3624.04 |
DESeq | | R. aegyptiacus | Transcriptome | 2955.77 | 2614.24 | 2299.93 | 3169.21 | 2529.56 | 3130.68 | 2921.07 | 3089.37 | 2010.21 |
DESeq | | R. aegyptiacus | Genome | 4202.42 | 4386.36 | 3241.33 | 3923.27 | 3605.11 | 4476.25 | 3996.59 | 4099.53 | 2947.01 |