TMCO3

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
TMCO3	TMCO3, C13orf11,FLJ20623	transmembrane and coiled-coil domains 3	NM_017905	pdf		NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The probable Na$^+$/H$^+$ antiporter TMCO3 did show to be upregulated in human cells Ebola infected cells at late infection stage. In contrast, bat cells homologs show equal expression over the time course.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	217	198	215	220	288	798	258	369	220
Read_Max		R. aegyptiacus	Transcriptome	23	19	15	23	16	15	14	27	22
Read_Max		R. aegyptiacus	Genome	222	204	108	206	133	48	124	305	199
DESeq		H. sapiens	Genome	2325.88	2411.98	2431.43	2540.16	2458.55	9141.4	2441.38	2490.18	2712.84
DESeq		R. aegyptiacus	Transcriptome	154.75	151.68	163.46	174.98	146.65	81.84	137.83	195.99	133.08
DESeq		R. aegyptiacus	Genome	2615.12	2778.21	2450.25	2589.18	2693.23	1422.9	2632.53	3106.76	2083.97

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	2325.88	2540.16	2441.38	0.13	0.07	-0.06
7h	2411.98	2458.55	2490.18	0.03	0.05	0.02
23h	2431.43	9141.4	2712.84	1.91	0.16	-1.75

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	2325.88	2411.98	2431.43	0.05	0.06	0.01
Ebov	2540.16	2458.55	9141.4	-0.05	1.85	1.89
Marv	2441.38	2490.18	2712.84	0.03	0.15	0.12

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	154.75	174.98	137.83	0.18	-0.17	-0.34
7h	151.68	146.65	195.99	-0.05	0.37	0.42
23h	163.46	81.84	133.08	-1.0	-0.3	0.7

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	154.75	151.68	163.46	-0.03	0.08	0.11
Ebov	174.98	146.65	81.84	-0.25	-1.1	-0.84
Marv	137.83	195.99	133.08	0.51	-0.05	-0.56