TMEM97

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
TMEM97	MAC30	transmembrane protein 97	NM_014573	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

TMEM97 is the transmembrane protein 97, involved in the cholesterol homeostasis and the regulation of cell growth. It seems downregulated in human cells after 23 h of Ebola infection.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	1980	1455	1497	1343	1717	504	1708	1675	1123
Read_Max		R. aegyptiacus	Transcriptome	192	236	140	166	158	217	148	228	278
Read_Max		R. aegyptiacus	Genome	294	214	179	272	132	149	221	311	326
DESeq		H. sapiens	Genome	17553.77	12474.05	14762.32	12821.14	13490.29	3935.61	13066.09	11688.3	12908.89
DESeq		R. aegyptiacus	Transcriptome	551.29	710.81	587.34	649.29	563.88	663.12	603.92	582.65	680.65
DESeq		R. aegyptiacus	Genome	2100.35	2432.31	2031.83	2377.86	2068.2	2284.47	2254.69	2278.93	2440.15

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	17553.77	12821.14	13066.09	-0.45	-0.43	0.03
7h	12474.05	13490.29	11688.3	0.11	-0.09	-0.21
23h	14762.32	3935.61	12908.89	-1.91	-0.19	1.71

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	17553.77	12474.05	14762.32	-0.49	-0.25	0.24
Ebov	12821.14	13490.29	3935.61	0.07	-1.7	-1.78
Marv	13066.09	11688.3	12908.89	-0.16	-0.02	0.14

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	551.29	649.29	603.92	0.24	0.13	-0.1
7h	710.81	563.88	582.65	-0.33	-0.29	0.05
23h	587.34	663.12	680.65	0.18	0.21	0.04

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	551.29	710.81	587.34	0.37	0.09	-0.28
Ebov	649.29	563.88	663.12	-0.2	0.03	0.23
Marv	603.92	582.65	680.65	-0.05	0.17	0.22