FMNL2

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
FMNL2 FMNL2, FHOD2,KIAA1902 formin-like 2 NM_052905 pdf NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

This gene encodes a formin-related protein. Formin-related proteins have been implicated in morphogenesis, cytokinesis, and cell polarity. Alternatively spliced transcript variants encoding different isoforms have been described but their full-length nature has yet to be determined.

Its expression is modulated in late infection phase in human cells and bat cells cells due to Ebola (but not Marburg) infection.

Show legend

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome212 345 280 243 388 440 338 418 261
Read_Max
batR. aegyptiacusTranscriptome 283 219 192 205 223 500 279 326 367
Read_Max
bat_genomeR. aegyptiacusGenome 460 347 211 309 246 341 279 431 452
DESeq
humanH. sapiensGenome 2852.55 3933.63 4254.26 2768.3 3942.19 9959.9 2783.49 3988.16 6734.94
DESeq
batR. aegyptiacusTranscriptome 755.45 661.8 733.92 671.27 799.32 1644.76 904.27 832.17 1020.04
DESeq
bat_genomeR. aegyptiacusGenome 7564.35 7034.06 6856.45 6735.63 7572.97 14627.12 7619.83 7107.97 8434.34

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 2852.55 2768.3 2783.49 -0.04 -0.04 0.01
7h 3933.63 3942.19 3988.16 0.0 0.02 0.02
23h 4254.26 9959.9 6734.94 1.23 0.66 -0.56

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 2852.55 3933.63 4254.26 0.46 0.58 0.11
Ebov 2768.3 3942.19 9959.9 0.51 1.85 1.34
Marv 2783.49 3988.16 6734.94 0.52 1.27 0.76

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 755.45 671.27 904.27 -0.17 0.26 0.43
7h 661.8 799.32 832.17 0.27 0.33 0.06
23h 733.92 1644.76 1020.04 1.16 0.47 -0.69

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 755.45 661.8 733.92 -0.19 -0.04 0.15
Ebov 671.27 799.32 1644.76 0.25 1.29 1.04
Marv 904.27 832.17 1020.04 -0.12 0.17 0.29