SLC38A2

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
SLC38A2	SLC38A2, ATA2, PRO1068, SAT2, SNAT2,SAT2, KIAA1382	solute carrier family 38, member 2		pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

unctions as a sodium-dependent amino acid transporter. Mediates the saturable, pH-sensitive and electrogenic cotransport of neutral amino acids and sodium ions with a stoichiometry of 1:1. May function in the transport of amino acids at the blood- brain barrier and in the supply of maternal nutrients to the fetus through the placenta.

Gene shows heterogeneous picture of changes in RNA abundance for infection phase of Ebola and Marburg in human cells and bat cells.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source	Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max	H. sapiens	Genome	1543	1721	1196	1136	1719	4039	1718	2161	1789
Read_Max	R. aegyptiacus	Transcriptome	1047	814	625	703	510	576	618	730	592
Read_Max	R. aegyptiacus	Genome	1589	1054	746	1101	589	475	751	1284	973
DESeq	H. sapiens	Genome	23756.15	24125.07	22957.09	18656.87	21869.37	66797.21	20429.35	21496.33	35855.18
DESeq	R. aegyptiacus	Transcriptome	4468.87	3847.79	4001.53	3793.7	3141.72	3193.56	4270.41	3791.64	2891.04
DESeq	R. aegyptiacus	Genome	18341.1	16463.92	16079.47	16704.27	14269.77	14488.75	19308.22	15363.33	13199.91

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	23756.15	18656.87	20429.35	-0.35	-0.22	0.13
7h	24125.07	21869.37	21496.33	-0.14	-0.17	-0.02
23h	22957.09	66797.21	35855.18	1.54	0.64	-0.9

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	23756.15	24125.07	22957.09	0.02	-0.05	-0.07
Ebov	18656.87	21869.37	66797.21	0.23	1.84	1.61
Marv	20429.35	21496.33	35855.18	0.07	0.81	0.74

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	4468.87	3793.7	4270.41	-0.24	-0.07	0.17
7h	3847.79	3141.72	3791.64	-0.29	-0.02	0.27
23h	4001.53	3193.56	2891.04	-0.33	-0.47	-0.14

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	4468.87	3847.79	4001.53	-0.22	-0.16	0.06
Ebov	3793.7	3141.72	3193.56	-0.27	-0.25	0.02
Marv	4270.41	3791.64	2891.04	-0.17	-0.56	-0.39

Differential transcriptional responses to Ebola and Marburg virus infection in cells from bats and humans

Supplemental Material