LGR4

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
LGR4		leucine-rich repeat containing G protein-coupled receptor 4	NM_018490	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Function unknown. Interesting differential splicing for ebola samples.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	748	983	563	954	855	231	1217	1251	474
Read_Max		R. aegyptiacus	Transcriptome	1120	856	802	1260	988	740	956	1359	908
Read_Max		R. aegyptiacus	Genome	1224	1268	695	830	797	450	780	1612	1000
DESeq		H. sapiens	Genome	14595.66	13130.84	12348.76	15324.94	13567.52	4321.17	15111.73	11089.59	11810.67
DESeq		R. aegyptiacus	Transcriptome	12860.19	11158.32	11715.54	14615.07	15172.38	9591.5	13926.1	14191.13	10291.95
DESeq		R. aegyptiacus	Genome	19573.47	21291.11	16690.92	17751.0	22870.7	14654.53	21458.32	20734.74	15408.03

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	14595.66	15324.94	15111.73	0.07	0.05	-0.02
7h	13130.84	13567.52	11089.59	0.05	-0.24	-0.29
23h	12348.76	4321.17	11810.67	-1.51	-0.06	1.45

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	14595.66	13130.84	12348.76	-0.15	-0.24	-0.09
Ebov	15324.94	13567.52	4321.17	-0.18	-1.83	-1.65
Marv	15111.73	11089.59	11810.67	-0.45	-0.36	0.09

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	12860.19	14615.07	13926.1	0.18	0.11	-0.07
7h	11158.32	15172.38	14191.13	0.44	0.35	-0.1
23h	11715.54	9591.5	10291.95	-0.29	-0.19	0.1

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	12860.19	11158.32	11715.54	-0.2	-0.13	0.07
Ebov	14615.07	15172.38	9591.5	0.05	-0.61	-0.66
Marv	13926.1	14191.13	10291.95	0.03	-0.44	-0.46