ANKRD12

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
ANKRD12 KIAA0874, FLJ20053, GAC-1 ankyrin repeat domain 12 NM_015208 pdf NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The encoded protein interacts with p160 coactivators and also represses transcription mediated by the coactivator alteration/deficiency in activation 3 (ADA3). Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. In this analysis there was not alternative spliced form observed. A clear expression pattern was not observed for this gene.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome106 95 187 96 174 460 126 114 208
Read_Max
batR. aegyptiacusTranscriptome 159 103 155 189 159 253 153 203 232
Read_Max
bat_genomeR. aegyptiacusGenome 159 190 134 98 131 159 125 243 259
DESeq
humanH. sapiensGenome 3190.48 2588.42 4052.72 2713.54 3234.11 9396.68 2745.77 2380.67 4835.34
DESeq
batR. aegyptiacusTranscriptome 2793.63 2174.01 3632.63 3810.18 3502.0 5790.72 3458.36 3674.32 4065.77
DESeq
bat_genomeR. aegyptiacusGenome 3190.06 3993.0 3733.39 2540.8 3753.56 6431.75 3874.01 3906.05 4336.61

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 3190.48 2713.54 2745.77 -0.23 -0.22 0.02
7h 2588.42 3234.11 2380.67 0.32 -0.12 -0.44
23h 4052.72 9396.68 4835.34 1.21 0.25 -0.96

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 3190.48 2588.42 4052.72 -0.3 0.35 0.65
Ebov 2713.54 3234.11 9396.68 0.25 1.79 1.54
Marv 2745.77 2380.67 4835.34 -0.21 0.82 1.02

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 2793.63 3810.18 3458.36 0.45 0.31 -0.14
7h 2174.01 3502.0 3674.32 0.69 0.76 0.07
23h 3632.63 5790.72 4065.77 0.67 0.16 -0.51

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 2793.63 2174.01 3632.63 -0.36 0.38 0.74
Ebov 3810.18 3502.0 5790.72 -0.12 0.6 0.73
Marv 3458.36 3674.32 4065.77 0.09 0.23 0.15